Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000066

Physical Location & Seq

Genomic Coordinates Forward (+)

7429895 .. 7432477

Gene Structure 2583 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G21230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2202 bp

ATGAAGGTGCATAGTCTGTTCTTGATGGCTATTTTCTTCTACCTAGCATATACGCAGCTGGTCAAGGCGCAACCTCGCGATGATTGCCAAACTAGATGTGGTGACGTCCCAATTGATTACCCTTTTGGTATTTCTACAGGTTGTTACTACCCCGGAGATGATAGCTTCAATATTACCTGTGAGGAAGATAAACCAAATGTCTTAAGCAACATTGAAGTGCTAAACTTTAATCATAGCGGCCAGCTACGCGGTCTGATTCCTCGATCCACTGTTTGCTACGACCAGCAAACAAATAATGATTTCGAGTCCCTCTGGTTTCGGTTGGATAATTTATCTTTCTCCCCCAATAACAAGTTTACTTTAGTAGGCTGTAACGCTTGGGCACTTCTAAGCACTTTTGGAATACAAAACTACTCAACTGGATGTATGTCATTATGCGATACTCCCCCGCCGCCAAATAGTAAATGTAATGGTGTTGGTTGCTGCAGAACAGAGGTATCTATCCCCTTGGATAGCCATAGAATTGAAACTCAACCATCTCGCTTCGAAAACATGACTTCCGTGGAGCACTTTAATCCTTGCAGCTACGCTTTTTTCGTTGAAGATGGTATGTTTAACTTCAGTTCTTTAGAAGATCTTAAGGATCTGCGAAATGTCACGAGGTTCCCTGTGTTACTAGATTGGTCTATTGGAAACCAGACATGTGAGCAAGTTGTAGGTAGAAACATATGTGGTGGGAACAGCACATGTTTTGATTCTACTCGTGGAAAGGGTTATAACTGCAAGTGTTTACAAGGTTTTGATGGGAATCCATACCTTTCGGACGGTTGCCAAGACATCAATGAGTGTACTACCCGTATACATAACTGTTCGGATACCAGCACATGTGAAAACACACTTGGAAGCTTCCATTGTCAGTGCCCATCTGGTTCTGATTTAAATACCACTACTATGAGCTGCATTGACACACCTAAAGAAGAGCCTAAGTACTTAGGATGGACTACTGTTCTTCTTGGAACCACCATCGGATTCTTAATCATCTTGCTTACCATTAGCTATATACAACAAAAAATGAGGCACCGAAAAAACACCGAGCTGCGACAACAATTCTTCGAGCAAAATGGTGGTGGCATGTTGATACAGCGACTCTCAGGAGCAGGGCCATCAAATGTGGATGTCAAAATCTTTACTGAAGAAGGCATGAAGGAAGCAACTGATGGTTATAATGAGAGCAGAATCCTAGGCCAGGGAGGACAAGGAACAGTCTACAAAGGGATATTGCAAGATAACTCCATTGTTGCTATAAAGAAAGCTCGACTTGGAGACCGTAGCCAAGTAGAGCAGTTCATCAACGAAGTGCTAGTGCTTTCACAAATAAACCACAGGAACGTGGTCAAACTCTTGGGCTGTTGTCTAGAGACTGAAGTTCCCTTGTTGGTCTATGAGTTCATTTCCAGTGGCACTCTTTTTGATCACTTGCACGGTTCTATGTTTGATTCTTCGCTTACATGGGAACACCGTCTGAGGATAGCCATAGAAGTTGCTGGAACTCTTGCATATCTTCACTCCTATGCTTCTATTCCAATCATCCACCGAGATGTCAAGACTGCTAACATTCTCCTCGATGAAAACTTAACTGCAAAAGTAGCTGATTTTGGTGCATCAAGGCTGATACCGATGGACCAAGAGCAGCTCACAACTATGGTTCAAGGAACTCTTGGCTATTTAGACCCTGAATACTACAATACAGGGCTTCTGAACGAAAAGAGCGATGTTTATAGCTTTGGGGTAGTCCTCATGGAACTGCTCTCAGGTGAAAAGGCATTATGCTTTGAACGGCCACAAAGCTCAAAACATCTAGTGAGTTACTTTGTTTCTGCCATGAAAGAAAATAGGTTGCATGAGATTATTGACGGTCAAGTTATGAACGAGTATAATCAGAGGGAGATCCAGGAATCTGCAAGAATTGCTGTTGAGTGTACAAGAATTATGGGAGAGGAAAGGCCAAGTATGAAAGAAGTAGCTGCAGAGTTAGAGGCCTTGAGAGTCAAAACAACCAAACATCAGTGGTCAGATCAATATCCCAAGGAGGTTGAGCATTTGCTTGGTGTTCAAATCTTATCGACGCAAGGTGATACCAGTAGCATTGGCTATGACAGCATCCAGAATGTAACAAGGTTGGACATTGAAACTGGCCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005975 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006884 GO:0006950 GO:0006952 GO:0007154 GO:0007165 GO:0007166 GO:0007275 GO:0008150 GO:0008152 GO:0008361 GO:0009311 GO:0009505 GO:0009605 GO:0009607 GO:0009615 GO:0009620 GO:0009653 GO:0009719 GO:0009725 GO:0009751 GO:0009791 GO:0009826 GO:0009987 GO:0009992 GO:0010033 GO:0014070 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0022622 GO:0023052 GO:0030104 GO:0030312 GO:0032501 GO:0032502 GO:0032535 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0042592 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046677 GO:0048364 GO:0048527 GO:0048528 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0051716 GO:0055082 GO:0060560 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0090066 GO:0090696 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

733

Amino Acids

82.21

Weight (kDa)

5.11

Isoelectric Point (pI)

37.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	29 - 81	2e-09	Wall-associated receptor kinase galacturonan-binding
EGF_CA	PF07645	279 - 320	1.2e-09	Calcium-binding EGF domain
Pkinase	PF00069	408 - 675	1.7e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	411 - 678	1.7e-47	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca	FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica	MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica	Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis	pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis	RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata	RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora	Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii	Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa	Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha	Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana	Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	777, 1224
AatII	GACGTC	1 cut(s)	108
AccB1I	GGYRCC	1 cut(s)	1077
AccI	GTMKAC	2 cut(s)	859, 1266
AccII	CGCG	2 cut(s)	78, 249
AciI	CCGC	5 cut(s)	237, 249, 449, 452, 2197
AclWI	GGATC	3 cut(s)	258, 651, 1942
AcoI	YGGCCR	3 cut(s)	238, 1838, 2194
AcuI	CTGAAG	3 cut(s)	604, 1212, 1443
AcyI	GRCGYC	1 cut(s)	105
AfaI	GTAC	3 cut(s)	850, 989, 1981
AfiI	CCNNNNNNNGG	1 cut(s)	1246
AflII	CTTAAG	2 cut(s)	202, 638
AflIII	ACRYGT	3 cut(s)	701, 746, 884
AgsI	TTSAA	8 cut(s)	169, 215, 527, 602, 1709, 1835, 2114, 2189
AjnI	CCWGG	2 cut(s)	1245, 1950
AjuI	GAANNNNNNNTTGG	2 cut(s)	882, 914
Alw21I	GWGCWC	1 cut(s)	570
Alw26I	GTCTC	2 cut(s)	1317, 1412
AlwI	GGATC	3 cut(s)	258, 651, 1942
AoxI	GGCC	7 cut(s)	238, 1160, 1243, 1838, 2003, 2037, 2194
ApeKI	GCWGC	7 cut(s)	55, 483, 582, 957, 1096, 1690, 2024
AspA2I	CCTAGG	1 cut(s)	1240
AspLEI	GCGC	1 cut(s)	70
AspS9I	GGNCC	2 cut(s)	1160, 1681
AsuC2I	CCSGG	1 cut(s)	153
AsuHPI	GGTGA	3 cut(s)	113, 1826, 2144
AsuII	TTCGAA	1 cut(s)	546
AvaII	GGWCC	1 cut(s)	1681
AvrII	CCTAGG	1 cut(s)	1240
BaeGI	GKGCMC	2 cut(s)	385, 923
BaeI	ACNNNNGTAYC	2 cut(s)	480, 513
BanI	GGYRCC	1 cut(s)	1077
BauI	CACGAG	2 cut(s)	658, 762
Bbv12I	GWGCWC	1 cut(s)	570
BbvI	GCAGC	7 cut(s)	67, 470, 594, 944, 1083, 1702, 2011
BceAI	ACGGC	1 cut(s)	1853
BciT130I	CCWGG	2 cut(s)	1247, 1952
BciVI	GTATCC	1 cut(s)	868
BclI	TGATCA	1 cut(s)	1471
BcnI	CCSGG	1 cut(s)	153
BcoDI	GTCTC	2 cut(s)	1317, 1412
BfaI	CTAG	7 cut(s)	44, 93, 677, 1241, 1361, 1415, 1859
BfmI	CTRYAG	3 cut(s)	135, 484, 2025
BfrI	CTTAAG	2 cut(s)	202, 638
BfuI	GTATCC	1 cut(s)	868
BglII	AGATCT	1 cut(s)	634
BlnI	CCTAGG	1 cut(s)	1240
BmcAI	AGTACT	1 cut(s)	989
Bme1390I	CCNGG	3 cut(s)	153, 1247, 1952
Bme18I	GGWCC	1 cut(s)	1681
BmgT120I	GGNCC	2 cut(s)	1160, 1681
BmiI	GGNNCC	3 cut(s)	665, 1018, 1079
BmrFI	CCNGG	3 cut(s)	153, 1247, 1952
BmsI	GCATC	2 cut(s)	1670, 2169
Bpu14I	TTCGAA	1 cut(s)	546
BpuEI	CTTGAG	1 cut(s)	2062
BpuMI	CCSGG	1 cut(s)	153
BsaBI	GATNNNNATC	2 cut(s)	807, 2079
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	1 cut(s)	1317
BsaJI	CCNNGG	6 cut(s)	151, 507, 561, 1240, 1246, 2085
Bsc4I	CCNNNNNNNGG	1 cut(s)	1246
Bse1I	ACTGG	4 cut(s)	424, 1455, 2139, 2197
Bse8I	GATNNNNATC	2 cut(s)	807, 2079
BseBI	CCWGG	2 cut(s)	1247, 1952
BseDI	CCNNGG	6 cut(s)	151, 507, 561, 1240, 1246, 2085
BseGI	GGATG	5 cut(s)	428, 1001, 1180, 1587, 2160
BseJI	GATNNNNATC	2 cut(s)	807, 2079
BseLI	CCNNNNNNNGG	1 cut(s)	1246
BseMII	CTCAG	3 cut(s)	1164, 1514, 1824
BseNI	ACTGG	4 cut(s)	424, 1455, 2139, 2197
BseRI	GAGGAG	1 cut(s)	1610
BseSI	GKGCMC	2 cut(s)	385, 923
BseXI	GCAGC	7 cut(s)	67, 470, 594, 944, 1083, 1702, 2011
Bsh1236I	CGCG	2 cut(s)	78, 249
BshFI	GGCC	7 cut(s)	240, 1162, 1245, 1840, 2005, 2039, 2196
BshNI	GGYRCC	1 cut(s)	1077
BsiHKAI	GWGCWC	1 cut(s)	570
BsiSI	CCGG	1 cut(s)	153
BslFI	GGGAC	2 cut(s)	92, 292
BslI	CCNNNNNNNGG	1 cut(s)	1246
BsmAI	GTCTC	2 cut(s)	1317, 1412
BsmFI	GGGAC	2 cut(s)	92, 292
BsnI	GGCC	7 cut(s)	240, 1162, 1245, 1840, 2005, 2039, 2196
Bso31I	GGTCTC	1 cut(s)	1317
Bsp119I	TTCGAA	1 cut(s)	546
Bsp1286I	GDGCHC	3 cut(s)	385, 570, 923
Bsp1407I	TGTACA	1 cut(s)	1979
Bsp143I	GATC	6 cut(s)	263, 634, 643, 1471, 1947, 2074
Bsp68I	TCGCGA	1 cut(s)	78
BspACI	CCGC	5 cut(s)	237, 249, 449, 452, 2197
BspANI	GGCC	7 cut(s)	240, 1162, 1245, 1840, 2005, 2039, 2196
BspCNI	CTCAG	3 cut(s)	1163, 1515, 1823
BspFNI	CGCG	2 cut(s)	78, 249
BspLI	GGNNCC	3 cut(s)	665, 1018, 1079
BspMAI	CTGCAG	2 cut(s)	488, 2029
BspPI	GGATC	3 cut(s)	258, 651, 1942
BspQI	GCTCTTC	1 cut(s)	972
BspT104I	TTCGAA	1 cut(s)	546
BspT107I	GGYRCC	1 cut(s)	1077
BspTI	CTTAAG	2 cut(s)	202, 638
BspTNI	GGTCTC	1 cut(s)	1317
BsrGI	TGTACA	1 cut(s)	1979
BsrI	ACTGG	4 cut(s)	424, 1455, 2139, 2197
BssECI	CCNNGG	6 cut(s)	151, 507, 561, 1240, 1246, 2085
BssMI	GATC	6 cut(s)	263, 634, 643, 1471, 1947, 2074
BssNAI	GTATAC	1 cut(s)	860
BssNI	GRCGYC	1 cut(s)	105
BssSI	CACGAG	2 cut(s)	658, 762
BssT1I	CCWWGG	3 cut(s)	507, 1240, 2085
Bst1107I	GTATAC	1 cut(s)	860
Bst2BI	CACGAG	2 cut(s)	658, 762
Bst2UI	CCWGG	2 cut(s)	1247, 1952
Bst4CI	ACNGT	9 cut(s)	271, 827, 869, 1006, 1264, 1328, 1484, 1520, 1916
Bst6I	CTCTTC	1 cut(s)	972
BstACI	GRCGYC	1 cut(s)	105
BstAFI	CTTAAG	2 cut(s)	202, 638
BstAPI	GCANNNNNTGC	1 cut(s)	1967
BstAUI	TGTACA	1 cut(s)	1979
BstBI	TTCGAA	1 cut(s)	546
BstC8I	GCNNGC	1 cut(s)	242
BstDEI	CTNAG	6 cut(s)	389, 984, 991, 1150, 1523, 1810
BstDSI	CCRYGG	1 cut(s)	561
BstENI	CCTNNNNNAGG	1 cut(s)	1244
BstF5I	GGATG	5 cut(s)	428, 1001, 1180, 1587, 2160
BstFNI	CGCG	2 cut(s)	78, 249
BstHHI	GCGC	1 cut(s)	70
BstKTI	GATC	6 cut(s)	266, 637, 646, 1474, 1950, 2077
BstMAI	GTCTC	2 cut(s)	1317, 1412
BstMBI	GATC	6 cut(s)	263, 634, 643, 1471, 1947, 2074
BstMWI	GCNNNNNNNGC	5 cut(s)	84, 246, 1646, 1967, 2157
BstNI	CCWGG	2 cut(s)	1247, 1952
BstNSI	RCATGY	4 cut(s)	705, 750, 888, 1135
BstSCI	CCNGG	3 cut(s)	151, 1245, 1950
BstSFI	CTRYAG	3 cut(s)	135, 484, 2025
BstSLI	GKGCMC	2 cut(s)	385, 923
BstUI	CGCG	2 cut(s)	78, 249
BstV1I	GCAGC	7 cut(s)	67, 470, 594, 944, 1083, 1702, 2011
BstX2I	RGATCY	3 cut(s)	634, 643, 1947
BstYI	RGATCY	3 cut(s)	634, 643, 1947
BstZ17I	GTATAC	1 cut(s)	860
BsuI	GTATCC	1 cut(s)	868
BsuRI	GGCC	7 cut(s)	240, 1162, 1245, 1840, 2005, 2039, 2196
BtgI	CCRYGG	1 cut(s)	561
BtgZI	GCGATG	2 cut(s)	93, 1785
BtsCI	GGATG	5 cut(s)	428, 1001, 1180, 1587, 2160
BtsIMutI	CAGTG	4 cut(s)	267, 923, 1462, 2072
BtuMI	TCGCGA	1 cut(s)	78
Cac8I	GCNNGC	1 cut(s)	242
CfoI	GCGC	1 cut(s)	70
Cfr13I	GGNCC	2 cut(s)	1160, 1681
CseI	GACGC	1 cut(s)	2134
Csp6I	GTAC	3 cut(s)	849, 988, 1980
CviQI	GTAC	3 cut(s)	849, 988, 1980
DdeI	CTNAG	6 cut(s)	389, 984, 991, 1150, 1523, 1810
DpnI	GATC	6 cut(s)	265, 636, 645, 1473, 1949, 2076
DpnII	GATC	6 cut(s)	263, 634, 643, 1471, 1947, 2074
DraI	TTTAAA	1 cut(s)	939
EaeI	YGGCCR	3 cut(s)	238, 1838, 2194
Eam1104I	CTCTTC	1 cut(s)	972
EarI	CTCTTC	1 cut(s)	972
Eco130I	CCWWGG	3 cut(s)	507, 1240, 2085
Eco147I	AGGCCT	1 cut(s)	2039
Eco31I	GGTCTC	1 cut(s)	1317
Eco47I	GGWCC	1 cut(s)	1681
Eco57I	CTGAAG	3 cut(s)	604, 1212, 1443
EcoNI	CCTNNNNNAGG	1 cut(s)	1244
EcoRII	CCWGG	2 cut(s)	1245, 1950
EcoT14I	CCWWGG	3 cut(s)	507, 1240, 2085
ErhI	CCWWGG	3 cut(s)	507, 1240, 2085
FalI	AAGNNNNNCTT	4 cut(s)	1302, 1334, 1701, 1733
FaqI	GGGAC	2 cut(s)	92, 292
FauI	CCCGC	1 cut(s)	456
FauNDI	CATATG	1 cut(s)	728
FbaI	TGATCA	1 cut(s)	1471
FblI	GTMKAC	2 cut(s)	859, 1266
FokI	GGATG	5 cut(s)	435, 1008, 1187, 1574, 2147
FspBI	CTAG	7 cut(s)	44, 93, 677, 1241, 1361, 1415, 1859
GlaI	GCGC	1 cut(s)	69
HaeIII	GGCC	7 cut(s)	240, 1162, 1245, 1840, 2005, 2039, 2196
HapII	CCGG	1 cut(s)	153
HgaI	GACGC	1 cut(s)	2134
HhaI	GCGC	1 cut(s)	70
Hin1I	GRCGYC	1 cut(s)	105
Hin6I	GCGC	1 cut(s)	68
HinP1I	GCGC	1 cut(s)	68
HindIII	AAGCTT	1 cut(s)	904
HpaII	CCGG	1 cut(s)	153
HphI	GGTGA	3 cut(s)	113, 1826, 2144
Hpy166II	GTNNAC	6 cut(s)	357, 791, 849, 860, 1267, 1980
Hpy188I	TCNGA	9 cut(s)	255, 823, 874, 934, 1028, 1524, 1758, 1941, 2074
Hpy188III	TCNNGA	7 cut(s)	22, 77, 658, 1152, 1415, 1603, 2164
Hpy8I	GTNNAC	6 cut(s)	357, 791, 849, 860, 1267, 1980
Hpy99I	CGWCG	1 cut(s)	2128
HpyAV	CCTTC	2 cut(s)	1190, 1198
HpyCH4III	ACNGT	9 cut(s)	271, 827, 869, 1006, 1264, 1328, 1484, 1520, 1916
HpyCH4IV	ACGT	2 cut(s)	105, 1389
HpyF10VI	GCNNNNNNNGC	5 cut(s)	84, 246, 1646, 1967, 2157
HpyF3I	CTNAG	6 cut(s)	389, 984, 991, 1150, 1523, 1810
HpySE526I	ACGT	2 cut(s)	105, 1389
Hsp92I	GRCGYC	1 cut(s)	105
HspAI	GCGC	1 cut(s)	68
Ksp22I	TGATCA	1 cut(s)	1471
Kzo9I	GATC	6 cut(s)	263, 634, 643, 1471, 1947, 2074
LguI	GCTCTTC	1 cut(s)	972
LmnI	GCTCC	2 cut(s)	565, 1154
Lsp1109I	GCAGC	7 cut(s)	67, 470, 594, 944, 1083, 1702, 2011
LweI	GCATC	2 cut(s)	1670, 2169
MaeI	CTAG	7 cut(s)	44, 93, 677, 1241, 1361, 1415, 1859
MaeII	ACGT	2 cut(s)	105, 1389
MaeIII	GTNAC	7 cut(s)	101, 143, 371, 655, 672, 1865, 2170
MalI	GATC	6 cut(s)	265, 636, 645, 1473, 1949, 2076
MboI	GATC	6 cut(s)	263, 634, 643, 1471, 1947, 2074
MfeI	CAATTG	1 cut(s)	111
MflI	RGATCY	3 cut(s)	634, 643, 1947
MhlI	GDGCHC	3 cut(s)	385, 570, 923
MluCI	AATT	6 cut(s)	111, 328, 522, 1106, 1965, 1986
MlyI	GAGTC	3 cut(s)	314, 1140, 2055
MmeI	TCCRAC	2 cut(s)	303, 2160
MseI	TTAA	8 cut(s)	203, 228, 573, 615, 639, 938, 1034, 1634
MslI	CAYNNNNRTG	5 cut(s)	215, 950, 1569, 1596, 1700
MspA1I	CMGCKG	2 cut(s)	58, 2199
MspCI	CTTAAG	2 cut(s)	202, 638
MspI	CCGG	1 cut(s)	153
MspR9I	CCNGG	3 cut(s)	153, 1247, 1952
MunI	CAATTG	1 cut(s)	111
MvaI	CCWGG	2 cut(s)	1247, 1952
MvnI	CGCG	2 cut(s)	78, 249
MwoI	GCNNNNNNNGC	5 cut(s)	84, 246, 1646, 1967, 2157
NciI	CCSGG	1 cut(s)	153
NdeI	CATATG	1 cut(s)	728
NdeII	GATC	6 cut(s)	263, 634, 643, 1471, 1947, 2074
NlaIV	GGNNCC	3 cut(s)	665, 1018, 1079
NmuCI	GTSAC	2 cut(s)	101, 655
NruI	TCGCGA	1 cut(s)	78
NspI	RCATGY	4 cut(s)	705, 750, 888, 1135
NspV	TTCGAA	1 cut(s)	546
PceI	AGGCCT	1 cut(s)	2039
PciI	ACATGT	3 cut(s)	701, 746, 884
PciSI	GCTCTTC	1 cut(s)	972
PcsI	WCGNNNNNNNCGW	2 cut(s)	594, 1767
PfeI	GAWTC	7 cut(s)	256, 755, 808, 1029, 1236, 1496, 1955
PfoI	TCCNGGA	1 cut(s)	1950
PleI	GAGTC	3 cut(s)	313, 1140, 2054
PpsI	GAGTC	3 cut(s)	313, 1140, 2054
PscI	ACATGT	3 cut(s)	701, 746, 884
PsiI	TTATAA	2 cut(s)	777, 1224
Psp6I	CCWGG	2 cut(s)	1245, 1950
PspGI	CCWGG	2 cut(s)	1245, 1950
PspN4I	GGNNCC	3 cut(s)	665, 1018, 1079
PspPI	GGNCC	2 cut(s)	1160, 1681
PstI	CTGCAG	2 cut(s)	488, 2029
PsuI	RGATCY	3 cut(s)	634, 643, 1947
PvuII	CAGCTG	1 cut(s)	58
RruI	TCGCGA	1 cut(s)	78
RsaI	GTAC	3 cut(s)	850, 989, 1981
RsaNI	GTAC	3 cut(s)	849, 988, 1980
RseI	CAYNNNNRTG	5 cut(s)	215, 950, 1569, 1596, 1700
SapI	GCTCTTC	1 cut(s)	972
SaqAI	TTAA	8 cut(s)	203, 228, 573, 615, 639, 938, 1034, 1634
Sau3AI	GATC	6 cut(s)	263, 634, 643, 1471, 1947, 2074
Sau96I	GGNCC	2 cut(s)	1160, 1681
ScaI	AGTACT	1 cut(s)	989
SchI	GAGTC	3 cut(s)	314, 1140, 2055
ScrFI	CCNGG	3 cut(s)	153, 1247, 1952
SduI	GDGCHC	3 cut(s)	385, 570, 923
SfaNI	GCATC	2 cut(s)	1670, 2169
SfcI	CTRYAG	3 cut(s)	135, 484, 2025
SfuI	TTCGAA	1 cut(s)	546
SinI	GGWCC	1 cut(s)	1681
SmiI	ATTTAAAT	1 cut(s)	939
SmiMI	CAYNNNNRTG	5 cut(s)	215, 950, 1569, 1596, 1700
SmlI	CTYRAG	3 cut(s)	202, 638, 2041
SmoI	CTYRAG	3 cut(s)	202, 638, 2041
Sse9I	AATT	6 cut(s)	111, 328, 522, 1106, 1965, 1986
SseBI	AGGCCT	1 cut(s)	2039
SsiI	CCGC	5 cut(s)	237, 249, 449, 452, 2197
SspI	AATATT	1 cut(s)	172
SspMI	CTAG	7 cut(s)	44, 93, 677, 1241, 1361, 1415, 1859
StuI	AGGCCT	1 cut(s)	2039
StyD4I	CCNGG	3 cut(s)	151, 1245, 1950
StyI	CCWWGG	3 cut(s)	507, 1240, 2085
SwaI	ATTTAAAT	1 cut(s)	939
TaaI	ACNGT	9 cut(s)	271, 827, 869, 1006, 1264, 1328, 1484, 1520, 1916
TaiI	ACGT	2 cut(s)	108, 1392
TaqI	TCGA	7 cut(s)	262, 303, 546, 1113, 1315, 1623, 2123
TasI	AATT	6 cut(s)	111, 328, 522, 1106, 1965, 1986
TatI	WGTACW	3 cut(s)	848, 987, 1979
TauI	GCSGC	3 cut(s)	240, 454, 2199
TfiI	GAWTC	7 cut(s)	256, 755, 808, 1029, 1236, 1496, 1955
Tru1I	TTAA	8 cut(s)	203, 228, 573, 615, 639, 938, 1034, 1634
Tru9I	TTAA	8 cut(s)	203, 228, 573, 615, 639, 938, 1034, 1634
TscAI	CASTG	4 cut(s)	274, 923, 1462, 2072
TseFI	GTSAC	2 cut(s)	101, 655
TseI	GCWGC	7 cut(s)	55, 483, 582, 957, 1096, 1690, 2024
Tsp45I	GTSAC	2 cut(s)	101, 655
TspDTI	ATGAA	8 cut(s)	17, 1217, 1336, 1438, 1641, 1898, 1940, 2027
TspGWI	ACGGA	1 cut(s)	550
TspRI	CASTG	4 cut(s)	274, 923, 1462, 2072
Vha464I	CTTAAG	2 cut(s)	202, 638
VpaK11BI	GGWCC	1 cut(s)	1681
XagI	CCTNNNNNAGG	1 cut(s)	1244
XbaI	TCTAGA	1 cut(s)	1414
XceI	RCATGY	4 cut(s)	705, 750, 888, 1135
XcmI	CCANNNNNNNNNTGG	1 cut(s)	95
XmaJI	CCTAGG	1 cut(s)	1240
XmiI	GTMKAC	2 cut(s)	859, 1266
XspI	CTAG	7 cut(s)	44, 93, 677, 1241, 1361, 1415, 1859
ZraI	GACGTC	1 cut(s)	106
ZrmI	AGTACT	1 cut(s)	989

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.