Rw3G024470

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000066
Physical Location & Seq
Forward (+)
31509968 .. 31511060
1093 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G024470.1

Sequence Viewer

Length: 999 bp
ATGGCCTTAGTACATGGGAAAATGCTTCTTATGAAACTCACATTAGTCTTATTAGCAGCTGCAACGACATTGGTAGCTGCAGCAGCTGATAAACCCCTCCCACCGCCTCAAGCCAAGCCCAACTGTCAAGGCCGCTGTGGTGACCTCACAATTCCATATCCATTTGGCATCGGTGACGGCTGTTACATACCACTGAAGGGACAGGAAACGGAATTCGAACTCATTTGTGATCATTCCACTAATCCCCCATCATTGAATTTTTCCGACACCAATGTCCGTGTCACTGATTTTAATCTAAATAAGGGTGAGTTGGAAGCTATGAATTTTATAAGCAAGGATTGTTACAACGAGGGCGGATCTAAGGAGGAGAACAACGATCCTGAGCTCCGGTTGGGTCGTCCTTTCAGTATTTCCGGTTCCGAAAACAGGTTCTTCGCCGTAGGCTGCGACACTTATGCTGTTTTCCAGGGTTTTCGTGGCGAAGAAGAGTTCGGGTTAGGGTGCATGTCCATGTGCTTCAACATCAGCAAAGAGGATCAAAACTCTTGCTCTGGTGTCGGGTGTTGCCAGATCAAAATCCCTGAAGGACTGAAGAATCATACTGTAAAATTGAGTAGCTATGACAATCATACGGATATATGGGAATTTAATCCCTGCAGCTATGCCTTCCTTGTGCGAGATGGCTACTTTAACTTCAGCGGTACGAGGAGTTTCGAAGAGCTCAAGAACATAGATGAGATGCCGATGATCGTTAATTGGCAGATTGGAAATGAGACATGCGAGGTAGCTGAAAAGAATGATGTGGATTATGCATGCAAGGCAAATTCCAAATGTGTCAACCAGACCAAGGGCCCATACCCTGGTTACCATTGCCAGTGCTTAGACGGCTACGAAGGGAACCCATACATCGGTTGCCTAGATATTGACGAGTGTTTGGCTGATATTAACCNCATGCGGAAATGGAACGTGCCAAAATTCACCTGCAAGTTACTCTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

332

Amino Acids

36.8

Weight (kDa)

4.81

Isoelectric Point (pI)

29.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 42 - 104 1.5e-10 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 329
AarI CACCTGC 1 cut(s) 989
AasI GACNNNNNNGTC 1 cut(s) 272
Acc36I ACCTGC 1 cut(s) 989
AccB7I CCANNNNNTGG 1 cut(s) 860
AciI CCGC 5 cut(s) 104, 133, 354, 699, 955
AclWI GGATC 3 cut(s) 364, 371, 543
AcsI RAATTY 6 cut(s) 212, 256, 322, 644, 823, 974
AcuI CTGAAG 4 cut(s) 215, 603, 611, 679
AfaI GTAC 2 cut(s) 12, 703
AfiI CCNNNNNNNGG 5 cut(s) 197, 426, 847, 860, 908
AgsI TTSAA 2 cut(s) 256, 520
AjnI CCWGG 2 cut(s) 465, 859
AluBI AGCT 9 cut(s) 59, 77, 86, 317, 385, 618, 660, 721, 788
AluI AGCT 9 cut(s) 59, 77, 86, 317, 385, 618, 660, 721, 788
Alw21I GWGCWC 2 cut(s) 387, 723
Alw26I GTCTC 1 cut(s) 767
AlwI GGATC 3 cut(s) 364, 371, 543
AlwNI CAGNNNCTG 1 cut(s) 86
AoxI GGCC 3 cut(s) 3, 130, 850
ApaI GGGCCC 1 cut(s) 854
ApeKI GCWGC 7 cut(s) 56, 59, 77, 80, 83, 444, 657
ApoI RAATTY 6 cut(s) 212, 256, 322, 644, 823, 974
AspS9I GGNCC 2 cut(s) 850, 851
AsuHPI GGTGA 4 cut(s) 152, 185, 317, 970
AsuII TTCGAA 2 cut(s) 216, 714
BaeGI GKGCMC 1 cut(s) 854
BanII GRGCYC 3 cut(s) 387, 723, 854
Bbv12I GWGCWC 2 cut(s) 387, 723
BbvI GCAGC 7 cut(s) 46, 64, 68, 92, 95, 431, 669
BccI CCATC 2 cut(s) 256, 674
BceAI ACGGC 3 cut(s) 193, 422, 901
BcgI CGANNNNNNTGC 2 cut(s) 437, 471
BciT130I CCWGG 2 cut(s) 467, 861
BclI TGATCA 1 cut(s) 229
BcoDI GTCTC 1 cut(s) 767
BfaI CTAG 1 cut(s) 917
BfmI CTRYAG 2 cut(s) 78, 655
BfuAI ACCTGC 1 cut(s) 989
BisI GCNGC 8 cut(s) 57, 60, 78, 81, 84, 133, 445, 658
BlsI GCNGC 8 cut(s) 58, 61, 79, 82, 85, 134, 446, 659
Bme1390I CCNGG 2 cut(s) 467, 861
BmgT120I GGNCC 2 cut(s) 850, 851
BmiI GGNNCC 3 cut(s) 418, 852, 899
BmrFI CCNGG 2 cut(s) 467, 861
BmsI GCATC 2 cut(s) 177, 729
Bpu10I CCTNAGC 1 cut(s) 381
Bpu14I TTCGAA 2 cut(s) 216, 714
BpuEI CTTGAG 2 cut(s) 93, 707
BsaBI GATNNNNATC 2 cut(s) 291, 575
BsaJI CCNNGG 3 cut(s) 466, 846, 859
BsaWI WCCGGW 2 cut(s) 387, 413
Bsc4I CCNNNNNNNGG 5 cut(s) 197, 426, 847, 860, 908
Bse1I ACTGG 1 cut(s) 874
Bse3DI GCAATG 1 cut(s) 868
Bse8I GATNNNNATC 2 cut(s) 291, 575
BseBI CCWGG 2 cut(s) 467, 861
BseDI CCNNGG 3 cut(s) 466, 846, 859
BseJI GATNNNNATC 2 cut(s) 291, 575
BseLI CCNNNNNNNGG 5 cut(s) 197, 426, 847, 860, 908
BseMI GCAATG 1 cut(s) 868
BseMII CTCAG 1 cut(s) 372
BseNI ACTGG 1 cut(s) 874
BseRI GAGGAG 2 cut(s) 380, 721
BseSI GKGCMC 1 cut(s) 854
BseXI GCAGC 7 cut(s) 46, 64, 68, 92, 95, 431, 669
BshFI GGCC 3 cut(s) 5, 132, 852
BsiHKAI GWGCWC 2 cut(s) 387, 723
BsiSI CCGG 2 cut(s) 388, 414
BslFI GGGAC 1 cut(s) 213
BslI CCNNNNNNNGG 5 cut(s) 197, 426, 847, 860, 908
BsmAI GTCTC 1 cut(s) 767
BsmFI GGGAC 1 cut(s) 213
BsnI GGCC 3 cut(s) 5, 132, 852
Bsp119I TTCGAA 2 cut(s) 216, 714
Bsp120I GGGCCC 1 cut(s) 850
Bsp1286I GDGCHC 3 cut(s) 387, 723, 854
Bsp143I GATC 6 cut(s) 229, 356, 376, 535, 570, 747
BspACI CCGC 5 cut(s) 104, 133, 354, 699, 955
BspANI GGCC 3 cut(s) 5, 132, 852
BspCNI CTCAG 1 cut(s) 373
BspLI GGNNCC 3 cut(s) 418, 852, 899
BspMAI CTGCAG 2 cut(s) 82, 659
BspMI ACCTGC 1 cut(s) 989
BspPI GGATC 3 cut(s) 364, 371, 543
BspQI GCTCTTC 1 cut(s) 711
BspT104I TTCGAA 2 cut(s) 216, 714
BsrDI GCAATG 1 cut(s) 868
BsrI ACTGG 1 cut(s) 874
BssECI CCNNGG 3 cut(s) 466, 846, 859
BssMI GATC 6 cut(s) 229, 356, 376, 535, 570, 747
BssT1I CCWWGG 1 cut(s) 846
Bst2UI CCWGG 2 cut(s) 467, 861
Bst4CI ACNGT 2 cut(s) 125, 604
Bst6I CTCTTC 2 cut(s) 480, 711
BstBI TTCGAA 2 cut(s) 216, 714
BstC8I GCNNGC 1 cut(s) 814
BstDEI CTNAG 4 cut(s) 7, 360, 381, 880
BstEII GGTNACC 2 cut(s) 140, 863
BstKTI GATC 6 cut(s) 232, 359, 379, 538, 573, 750
BstMAI GTCTC 1 cut(s) 767
BstMBI GATC 6 cut(s) 229, 356, 376, 535, 570, 747
BstMWI GCNNNNNNNGC 3 cut(s) 83, 818, 885
BstNI CCWGG 2 cut(s) 467, 861
BstNSI RCATGY 3 cut(s) 508, 780, 816
BstPI GGTNACC 2 cut(s) 140, 863
BstSCI CCNGG 2 cut(s) 465, 859
BstSFI CTRYAG 2 cut(s) 78, 655
BstSLI GKGCMC 1 cut(s) 854
BstV1I GCAGC 7 cut(s) 46, 64, 68, 92, 95, 431, 669
BstX2I RGATCY 1 cut(s) 356
BstYI RGATCY 1 cut(s) 356
BsuRI GGCC 3 cut(s) 5, 132, 852
BtsIMutI CAGTG 3 cut(s) 191, 282, 881
BveI ACCTGC 1 cut(s) 989
Cac8I GCNNGC 1 cut(s) 814
CaiI CAGNNNCTG 1 cut(s) 86
Cfr13I GGNCC 2 cut(s) 850, 851
Csp6I GTAC 2 cut(s) 11, 702
CviAII CATG 6 cut(s) 14, 505, 511, 777, 813, 952
CviQI GTAC 2 cut(s) 11, 702
DdeI CTNAG 4 cut(s) 7, 360, 381, 880
DpnI GATC 6 cut(s) 231, 358, 378, 537, 572, 749
DpnII GATC 6 cut(s) 229, 356, 376, 535, 570, 747
DrdI GACNNNNNNGTC 1 cut(s) 272
DseDI GACNNNNNNGTC 1 cut(s) 272
Eam1104I CTCTTC 2 cut(s) 480, 711
EarI CTCTTC 2 cut(s) 480, 711
EciI GGCGGA 1 cut(s) 369
Ecl136II GAGCTC 2 cut(s) 385, 721
Eco130I CCWWGG 1 cut(s) 846
Eco24I GRGCYC 3 cut(s) 387, 723, 854
Eco53kI GAGCTC 2 cut(s) 385, 721
Eco57I CTGAAG 4 cut(s) 215, 603, 611, 679
Eco91I GGTNACC 2 cut(s) 140, 863
EcoICRI GAGCTC 2 cut(s) 385, 721
EcoO109I RGGNCCY 1 cut(s) 850
EcoO65I GGTNACC 2 cut(s) 140, 863
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 2 cut(s) 465, 859
EcoT14I CCWWGG 1 cut(s) 846
EcoT22I ATGCAT 1 cut(s) 814
EcoT38I GRGCYC 3 cut(s) 387, 723, 854
ErhI CCWWGG 1 cut(s) 846
FaeI CATG 6 cut(s) 17, 508, 514, 780, 816, 955
FalI AAGNNNNNCTT 1 cut(s) 977
FaqI GGGAC 1 cut(s) 213
FatI CATG 6 cut(s) 13, 504, 510, 776, 812, 951
FbaI TGATCA 1 cut(s) 229
Fnu4HI GCNGC 8 cut(s) 57, 60, 78, 81, 84, 133, 445, 658
FriOI GRGCYC 3 cut(s) 387, 723, 854
Fsp4HI GCNGC 8 cut(s) 57, 60, 78, 81, 84, 133, 445, 658
FspBI CTAG 1 cut(s) 917
GluI GCNGC 8 cut(s) 57, 60, 78, 81, 84, 133, 445, 658
HaeIII GGCC 3 cut(s) 5, 132, 852
HapII CCGG 2 cut(s) 388, 414
Hin1II CATG 6 cut(s) 17, 508, 514, 780, 816, 955
HincII GTYRAC 1 cut(s) 838
HindII GTYRAC 1 cut(s) 838
HinfI GANTC 1 cut(s) 595
HpaII CCGG 2 cut(s) 388, 414
HphI GGTGA 4 cut(s) 152, 185, 317, 970
Hpy166II GTNNAC 1 cut(s) 838
Hpy188I TCNGA 2 cut(s) 265, 421
Hpy188III TCNNGA 2 cut(s) 380, 724
Hpy8I GTNNAC 1 cut(s) 838
HpyAV CCTTC 4 cut(s) 190, 578, 676, 887
HpyCH4III ACNGT 2 cut(s) 125, 604
HpyCH4IV ACGT 1 cut(s) 966
HpyCH4V TGCA 7 cut(s) 62, 80, 504, 657, 812, 816, 984
HpyF10VI GCNNNNNNNGC 3 cut(s) 83, 818, 885
HpyF3I CTNAG 4 cut(s) 7, 360, 381, 880
HpySE526I ACGT 1 cut(s) 966
Hsp92II CATG 6 cut(s) 17, 508, 514, 780, 816, 955
Ksp22I TGATCA 1 cut(s) 229
Kzo9I GATC 6 cut(s) 229, 356, 376, 535, 570, 747
LguI GCTCTTC 1 cut(s) 711
LmnI GCTCC 1 cut(s) 390
Lsp1109I GCAGC 7 cut(s) 46, 64, 68, 92, 95, 431, 669
LweI GCATC 2 cut(s) 177, 729
MaeI CTAG 1 cut(s) 917
MaeII ACGT 1 cut(s) 966
MaeIII GTNAC 7 cut(s) 140, 173, 182, 280, 341, 863, 987
MalI GATC 6 cut(s) 231, 358, 378, 537, 572, 749
MboI GATC 6 cut(s) 229, 356, 376, 535, 570, 747
MboII GAAGA 5 cut(s) 424, 494, 497, 604, 728
MflI RGATCY 1 cut(s) 356
MhlI GDGCHC 3 cut(s) 387, 723, 854
MluCI AATT 9 cut(s) 150, 212, 256, 322, 608, 644, 754, 823, 974
MmeI TCCRAC 2 cut(s) 288, 291
MnlI CCTC 8 cut(s) 107, 117, 155, 343, 358, 526, 699, 775
Mph1103I ATGCAT 1 cut(s) 814
MseI TTAA 5 cut(s) 291, 648, 690, 753, 945
MslI CAYNNNNRTG 1 cut(s) 509
MspA1I CMGCKG 4 cut(s) 59, 86, 135, 699
MspI CCGG 2 cut(s) 388, 414
MspR9I CCNGG 2 cut(s) 467, 861
MvaI CCWGG 2 cut(s) 467, 861
MwoI GCNNNNNNNGC 3 cut(s) 83, 818, 885
NdeII GATC 6 cut(s) 229, 356, 376, 535, 570, 747
NlaIII CATG 6 cut(s) 17, 508, 514, 780, 816, 955
NlaIV GGNNCC 3 cut(s) 418, 852, 899
NmuCI GTSAC 3 cut(s) 140, 173, 280
NsiI ATGCAT 1 cut(s) 814
NspI RCATGY 3 cut(s) 508, 780, 816
NspV TTCGAA 2 cut(s) 216, 714
PaeI GCATGC 1 cut(s) 816
PaqCI CACCTGC 1 cut(s) 989
PciSI GCTCTTC 1 cut(s) 711
PfeI GAWTC 1 cut(s) 595
PflMI CCANNNNNTGG 1 cut(s) 860
PkrI GCNGC 8 cut(s) 58, 61, 79, 82, 85, 134, 446, 659
PsiI TTATAA 1 cut(s) 329
Psp124BI GAGCTC 2 cut(s) 387, 723
Psp6I CCWGG 2 cut(s) 465, 859
PspEI GGTNACC 2 cut(s) 140, 863
PspGI CCWGG 2 cut(s) 465, 859
PspN4I GGNNCC 3 cut(s) 418, 852, 899
PspOMI GGGCCC 1 cut(s) 850
PspPI GGNCC 2 cut(s) 850, 851
PsrI GAACNNNNNNTAC 2 cut(s) 400, 432
PstI CTGCAG 2 cut(s) 82, 659
PstNI CAGNNNCTG 1 cut(s) 86
PsuI RGATCY 1 cut(s) 356
PvuII CAGCTG 2 cut(s) 59, 86
RsaI GTAC 2 cut(s) 12, 703
RsaNI GTAC 2 cut(s) 11, 702
RseI CAYNNNNRTG 1 cut(s) 509
SacI GAGCTC 2 cut(s) 387, 723
SapI GCTCTTC 1 cut(s) 711
SaqAI TTAA 5 cut(s) 291, 648, 690, 753, 945
SatI GCNGC 8 cut(s) 57, 60, 78, 81, 84, 133, 445, 658
Sau3AI GATC 6 cut(s) 229, 356, 376, 535, 570, 747
Sau96I GGNCC 2 cut(s) 850, 851
ScrFI CCNGG 2 cut(s) 467, 861
SduI GDGCHC 3 cut(s) 387, 723, 854
SfaNI GCATC 2 cut(s) 177, 729
SfcI CTRYAG 2 cut(s) 78, 655
SfuI TTCGAA 2 cut(s) 216, 714
SmiMI CAYNNNNRTG 1 cut(s) 509
SmlI CTYRAG 2 cut(s) 108, 722
SmoI CTYRAG 2 cut(s) 108, 722
SphI GCATGC 1 cut(s) 816
Sse9I AATT 9 cut(s) 150, 212, 256, 322, 608, 644, 754, 823, 974
SsiI CCGC 5 cut(s) 104, 133, 354, 699, 955
SspMI CTAG 1 cut(s) 917
SstI GAGCTC 2 cut(s) 387, 723
StyD4I CCNGG 2 cut(s) 465, 859
StyI CCWWGG 1 cut(s) 846
TaaI ACNGT 2 cut(s) 125, 604
TaiI ACGT 1 cut(s) 969
TaqI TCGA 2 cut(s) 216, 714
TasI AATT 9 cut(s) 150, 212, 256, 322, 608, 644, 754, 823, 974
TatI WGTACW 1 cut(s) 10
TauI GCSGC 1 cut(s) 135
TfiI GAWTC 1 cut(s) 595
Tru1I TTAA 5 cut(s) 291, 648, 690, 753, 945
Tru9I TTAA 5 cut(s) 291, 648, 690, 753, 945
TscAI CASTG 3 cut(s) 198, 289, 881
TseFI GTSAC 3 cut(s) 140, 173, 280
TseI GCWGC 7 cut(s) 56, 59, 77, 80, 83, 444, 657
Tsp45I GTSAC 3 cut(s) 140, 173, 280
TspDTI ATGAA 2 cut(s) 47, 335
TspGWI ACGGA 3 cut(s) 224, 266, 647
TspRI CASTG 3 cut(s) 198, 289, 881
Van91I CCANNNNNTGG 1 cut(s) 860
XapI RAATTY 6 cut(s) 212, 256, 322, 644, 823, 974
XceI RCATGY 3 cut(s) 508, 780, 816
XcmI CCANNNNNNNNNTGG 1 cut(s) 473
XspI CTAG 1 cut(s) 917
Zsp2I ATGCAT 1 cut(s) 814
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.