RchiOBHm_Chr5g0054941

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
57679640 .. 57680923
1284 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33200

Sequence Viewer

Length: 1284 bp
ATGTCTAACAAATTGAAACTCAAAGTAATTGAATTACTTCTGATATTTCAACTATGTACAGGTCTCAGTATAGGCTTCTTCATTTTAGTGGTTTTAATTTGGTGGACTTATTGGGGAATGAACAAACGAAGACTAGTAAGACTCCAAGAAAAGTACTTCCAAGAAAATGGCGGCTCAACATTACAGCAACATCTCGCTAGTCATGGAGGATCTGTTGAGACAGCAAAAATCTTTACTGCAGAGGAACTTCAGAAAGCCACAAACAATTACCATGTAGATGAAATCCTTGGTGAAGGAGGCTATGCAGCAGTTTACAAAGGAAAACTACATGATAAGAGTGTTGTTGCCATAAAGAAGCCAAAGATTGGCGCTCCAACTCAAAGTGATCAGTTCGTTAATGAGGTTATCGTTCTTTCTCAGATAAACCACAGAAATGTAGTAAAACTATTAGGTTGTTGTTTCGAGACCGAAGTGCCTTTACTGGTATATGAGTACATTACTCATGGCACTCTTTTCGAGCATTTATTCAATAAGGGAAAAGGATCCTCGCTTTCATGGGAATTACGATTGAAGATAGCATCAGAAACTGCAGGCGCACTAGCATACTTACACTCATCTACTTCCACTCCAATCATACATAGAGACGTGAAAACAACGAATATATTATTGGATGACAATTACACGGCCAAAGTGTCTGATTTTGGAGCTTCGCGTTTCATTCCTCTAGATCAAACTCAACTTGCAACACTGGTTCAAGGGACGCTTGGATACTTGGATCCTGAATACTTTCATTCAAACCAACTAACTGAAAAGAGTGACGTCTATAGTTTTGGAGTTGTCCTAGCGGAGCTACTAACAAGTAGAGTTGCACTTTCTTTTGCCAGGCCTGACAAGGAGAGATGCCTAGCAAGCTTCTTTGTTTCTTCAATAGAAAACGAATGCTTGATTCAAATTCTTGATGCTGATATAGTGAATGAGGAGAGCATCGAGACGGTAGAGCAAGTGGCGATTCTGGCAAAAAGATGTTTGATGATAAAAAGTGAGGAAAGGCCTACGATGAAAGAAGTTGCCATGGAGTTAGAAGGGATGAGAATTATGACAACGCATCCATGGAAAAATGGCAATTCCGGCTTTGAGGAGACTGGGTACTTGCTCGGGTCACCTAATTCAGCGGCTTATGTGATGAATATTGGAGATGGAGGTGCCGGTGGTTCGAGCGTTACAAATACTGGGTATGACAGCATGCAAATACAAATGTTAATGCCCTACGATGACGGGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

427

Amino Acids

47.53

Weight (kDa)

5.63

Isoelectric Point (pI)

34.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 90 - 356 8e-46 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 92 - 360 1.6e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 822
AccB1I GGYRCC 1 cut(s) 1202
AccB7I CCANNNNNTGG 1 cut(s) 365
AccII CGCG 1 cut(s) 712
AciI CCGC 3 cut(s) 171, 845, 1172
AclWI GGATC 5 cut(s) 217, 537, 550, 770, 783
AcoI YGGCCR 1 cut(s) 684
AcsI RAATTY 1 cut(s) 951
AcuI CTGAAG 1 cut(s) 233
AcyI GRCGYC 1 cut(s) 819
AfaI GTAC 4 cut(s) 58, 155, 494, 1148
AfiI CCNNNNNNNGG 1 cut(s) 365
AgsI TTSAA 9 cut(s) 16, 32, 50, 529, 571, 755, 795, 927, 950
AhlI ACTAGT 1 cut(s) 133
AjiI CACGTC 1 cut(s) 646
AjnI CCWGG 1 cut(s) 881
AjuI GAANNNNNNNTTGG 2 cut(s) 650, 682
AluBI AGCT 3 cut(s) 707, 850, 912
AluI AGCT 3 cut(s) 707, 850, 912
Alw26I GTCTC 6 cut(s) 68, 212, 458, 636, 983, 1133
AlwI GGATC 5 cut(s) 217, 537, 550, 770, 783
AlwNI CAGNNNCTG 1 cut(s) 587
Ama87I CYCGRG 1 cut(s) 1154
AoxI GGCC 3 cut(s) 684, 884, 1049
ApeKI GCWGC 1 cut(s) 305
ApoI RAATTY 1 cut(s) 951
Asp700I GAANNNNTTC 2 cut(s) 36, 786
AspLEI GCGC 2 cut(s) 371, 596
AsuHPI GGTGA 2 cut(s) 302, 1152
AvaI CYCGRG 1 cut(s) 1154
BamHI GGATCC 2 cut(s) 542, 775
BanI GGYRCC 1 cut(s) 1202
BarI GAAGNNNNNNTAC 2 cut(s) 462, 494
BbsI GAAGAC 1 cut(s) 136
BbvI GCAGC 1 cut(s) 317
BccI CCATC 1 cut(s) 1190
BceAI ACGGC 1 cut(s) 699
BcgI CGANNNNNNTGC 2 cut(s) 496, 530
BciT130I CCWGG 1 cut(s) 883
BciVI GTATCC 1 cut(s) 761
BclI TGATCA 1 cut(s) 385
BcoDI GTCTC 6 cut(s) 68, 212, 458, 636, 983, 1133
BcuI ACTAGT 1 cut(s) 133
BfaI CTAG 6 cut(s) 134, 198, 599, 725, 842, 905
BfmI CTRYAG 3 cut(s) 237, 588, 823
BfoI RGCGCY 1 cut(s) 372
BfuI GTATCC 1 cut(s) 761
BisI GCNGC 3 cut(s) 172, 306, 1173
BlsI GCNGC 3 cut(s) 173, 307, 1174
BmcAI AGTACT 1 cut(s) 155
Bme1390I CCNGG 1 cut(s) 883
BmeT110I CYCGRG 1 cut(s) 1154
BmgBI CACGTC 1 cut(s) 646
BmiI GGNNCC 3 cut(s) 544, 777, 1204
BmrFI CCNGG 1 cut(s) 883
BmrI ACTGGG 2 cut(s) 1152, 1239
BmsI GCATC 5 cut(s) 587, 890, 949, 993, 1114
BmuI ACTGGG 2 cut(s) 1152, 1239
BpiI GAAGAC 1 cut(s) 136
BsaHI GRCGYC 1 cut(s) 819
BsaI GGTCTC 2 cut(s) 68, 458
BsaJI CCNNGG 3 cut(s) 286, 1071, 1109
BsaXI ACNNNNNCTCC 6 cut(s) 198, 228, 610, 640, 1130, 1160
Bsc4I CCNNNNNNNGG 1 cut(s) 365
Bse118I RCCGGY 1 cut(s) 1205
Bse1I ACTGG 4 cut(s) 486, 753, 1147, 1234
BseBI CCWGG 1 cut(s) 883
BseDI CCNNGG 3 cut(s) 286, 1071, 1109
BseGI GGATG 3 cut(s) 676, 1092, 1105
BseLI CCNNNNNNNGG 1 cut(s) 365
BseMII CTCAG 2 cut(s) 79, 431
BseNI ACTGG 4 cut(s) 486, 753, 1147, 1234
BseRI GAGGAG 2 cut(s) 992, 1151
BseXI GCAGC 1 cut(s) 317
Bsh1236I CGCG 1 cut(s) 712
BshFI GGCC 3 cut(s) 686, 886, 1051
BshNI GGYRCC 1 cut(s) 1202
BsiHKCI CYCGRG 1 cut(s) 1154
BsiSI CCGG 2 cut(s) 1128, 1206
BslFI GGGAC 1 cut(s) 772
BslI CCNNNNNNNGG 1 cut(s) 365
BsmAI GTCTC 6 cut(s) 68, 212, 458, 636, 983, 1133
BsmBI CGTCTC 2 cut(s) 636, 983
BsmFI GGGAC 1 cut(s) 772
BsmI GAATGC 1 cut(s) 944
BsnI GGCC 3 cut(s) 686, 886, 1051
Bso31I GGTCTC 2 cut(s) 68, 458
BsoBI CYCGRG 1 cut(s) 1154
Bsp1407I TGTACA 1 cut(s) 56
Bsp143I GATC 5 cut(s) 209, 385, 542, 727, 775
Bsp19I CCATGG 2 cut(s) 1071, 1109
BspACI CCGC 3 cut(s) 171, 845, 1172
BspANI GGCC 3 cut(s) 686, 886, 1051
BspCNI CTCAG 2 cut(s) 78, 430
BspFNI CGCG 1 cut(s) 712
BspLI GGNNCC 3 cut(s) 544, 777, 1204
BspMAI CTGCAG 2 cut(s) 241, 592
BspPI GGATC 5 cut(s) 217, 537, 550, 770, 783
BspT107I GGYRCC 1 cut(s) 1202
BspTNI GGTCTC 2 cut(s) 68, 458
BsrFI RCCGGY 1 cut(s) 1205
BsrGI TGTACA 1 cut(s) 56
BsrI ACTGG 4 cut(s) 486, 753, 1147, 1234
BssAI RCCGGY 1 cut(s) 1205
BssECI CCNNGG 3 cut(s) 286, 1071, 1109
BssMI GATC 5 cut(s) 209, 385, 542, 727, 775
BssNI GRCGYC 1 cut(s) 819
BssT1I CCWWGG 3 cut(s) 286, 1071, 1109
Bst2UI CCWGG 1 cut(s) 883
Bst4CI ACNGT 1 cut(s) 994
BstACI GRCGYC 1 cut(s) 819
BstAUI TGTACA 1 cut(s) 56
BstC8I GCNNGC 3 cut(s) 592, 910, 1244
BstDEI CTNAG 2 cut(s) 65, 417
BstDSI CCRYGG 2 cut(s) 1071, 1109
BstEII GGTNACC 1 cut(s) 1158
BstF5I GGATG 3 cut(s) 676, 1092, 1105
BstFNI CGCG 1 cut(s) 712
BstH2I RGCGCY 1 cut(s) 372
BstHHI GCGC 2 cut(s) 371, 596
BstKTI GATC 5 cut(s) 212, 388, 545, 730, 778
BstMAI GTCTC 6 cut(s) 68, 212, 458, 636, 983, 1133
BstMBI GATC 5 cut(s) 209, 385, 542, 727, 775
BstMWI GCNNNNNNNGC 3 cut(s) 909, 1013, 1128
BstNI CCWGG 1 cut(s) 883
BstNSI RCATGY 1 cut(s) 1246
BstPI GGTNACC 1 cut(s) 1158
BstSCI CCNGG 1 cut(s) 881
BstSFI CTRYAG 3 cut(s) 237, 588, 823
BstUI CGCG 1 cut(s) 712
BstV1I GCAGC 1 cut(s) 317
BstV2I GAAGAC 1 cut(s) 136
BstX2I RGATCY 3 cut(s) 209, 542, 775
BstXI CCANNNNNNTGG 1 cut(s) 167
BstYI RGATCY 3 cut(s) 209, 542, 775
BsuI GTATCC 1 cut(s) 761
BsuRI GGCC 3 cut(s) 686, 886, 1051
BtgI CCRYGG 2 cut(s) 1071, 1109
BtrI CACGTC 1 cut(s) 646
BtsCI GGATG 3 cut(s) 676, 1092, 1105
BtsIMutI CAGTG 1 cut(s) 746
Cac8I GCNNGC 3 cut(s) 592, 910, 1244
CaiI CAGNNNCTG 1 cut(s) 587
CfoI GCGC 2 cut(s) 371, 596
Cfr10I RCCGGY 1 cut(s) 1205
CseI GACGC 1 cut(s) 769
Csp6I GTAC 4 cut(s) 57, 154, 493, 1147
CviAII CATG 8 cut(s) 203, 272, 329, 503, 555, 1072, 1110, 1243
CviQI GTAC 4 cut(s) 57, 154, 493, 1147
DdeI CTNAG 2 cut(s) 65, 417
DpnI GATC 5 cut(s) 211, 387, 544, 729, 777
DpnII GATC 5 cut(s) 209, 385, 542, 727, 775
EaeI YGGCCR 1 cut(s) 684
Eco130I CCWWGG 3 cut(s) 286, 1071, 1109
Eco147I AGGCCT 2 cut(s) 886, 1051
Eco31I GGTCTC 2 cut(s) 68, 458
Eco57I CTGAAG 1 cut(s) 233
Eco88I CYCGRG 1 cut(s) 1154
Eco91I GGTNACC 1 cut(s) 1158
EcoO65I GGTNACC 1 cut(s) 1158
EcoRII CCWGG 1 cut(s) 881
EcoT14I CCWWGG 3 cut(s) 286, 1071, 1109
ErhI CCWWGG 3 cut(s) 286, 1071, 1109
Esp3I CGTCTC 2 cut(s) 636, 983
FaeI CATG 8 cut(s) 206, 275, 332, 506, 558, 1075, 1113, 1246
FalI AAGNNNNNCTT 2 cut(s) 747, 779
FaqI GGGAC 1 cut(s) 772
FatI CATG 8 cut(s) 202, 271, 328, 502, 554, 1071, 1109, 1242
FbaI TGATCA 1 cut(s) 385
Fnu4HI GCNGC 3 cut(s) 172, 306, 1173
FokI GGATG 3 cut(s) 683, 1092, 1099
Fsp4HI GCNGC 3 cut(s) 172, 306, 1173
FspBI CTAG 6 cut(s) 134, 198, 599, 725, 842, 905
GlaI GCGC 2 cut(s) 370, 595
GluI GCNGC 3 cut(s) 172, 306, 1173
HaeII RGCGCY 1 cut(s) 372
HaeIII GGCC 3 cut(s) 686, 886, 1051
HapII CCGG 2 cut(s) 1128, 1206
HgaI GACGC 1 cut(s) 769
HhaI GCGC 2 cut(s) 371, 596
Hin1I GRCGYC 1 cut(s) 819
Hin1II CATG 8 cut(s) 206, 275, 332, 506, 558, 1075, 1113, 1246
Hin6I GCGC 2 cut(s) 369, 594
HinP1I GCGC 2 cut(s) 369, 594
HindIII AAGCTT 1 cut(s) 910
HinfI GANTC 3 cut(s) 141, 946, 1009
HpaII CCGG 2 cut(s) 1128, 1206
HphI GGTGA 2 cut(s) 302, 1152
Hpy166II GTNNAC 2 cut(s) 105, 313
Hpy188I TCNGA 5 cut(s) 42, 252, 420, 583, 697
Hpy188III TCNNGA 5 cut(s) 463, 725, 779, 956, 988
Hpy8I GTNNAC 2 cut(s) 105, 313
HpyAV CCTTC 2 cut(s) 287, 1076
HpyCH4III ACNGT 1 cut(s) 994
HpyCH4IV ACGT 2 cut(s) 645, 819
HpyCH4V TGCA 6 cut(s) 239, 305, 590, 743, 869, 1246
HpyF10VI GCNNNNNNNGC 3 cut(s) 909, 1013, 1128
HpyF3I CTNAG 2 cut(s) 65, 417
HpySE526I ACGT 2 cut(s) 645, 819
Hsp92I GRCGYC 1 cut(s) 819
Hsp92II CATG 8 cut(s) 206, 275, 332, 506, 558, 1075, 1113, 1246
HspAI GCGC 2 cut(s) 369, 594
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 5 cut(s) 209, 385, 542, 727, 775
LmnI GCTCC 3 cut(s) 376, 704, 847
Lsp1109I GCAGC 1 cut(s) 317
LweI GCATC 5 cut(s) 587, 890, 949, 993, 1114
MaeI CTAG 6 cut(s) 134, 198, 599, 725, 842, 905
MaeII ACGT 2 cut(s) 645, 819
MaeIII GTNAC 3 cut(s) 815, 1158, 1219
MalI GATC 5 cut(s) 211, 387, 544, 729, 777
MboI GATC 5 cut(s) 209, 385, 542, 727, 775
MboII GAAGA 4 cut(s) 70, 141, 583, 915
MflI RGATCY 3 cut(s) 209, 542, 775
MlyI GAGTC 1 cut(s) 135
MmeI TCCRAC 1 cut(s) 398
MroXI GAANNNNTTC 2 cut(s) 36, 786
MseI TTAA 3 cut(s) 95, 396, 1259
MslI CAYNNNNRTG 3 cut(s) 86, 276, 432
MspA1I CMGCKG 1 cut(s) 1172
MspI CCGG 2 cut(s) 1128, 1206
MspR9I CCNGG 1 cut(s) 883
Mva1269I GAATGC 1 cut(s) 944
MvaI CCWGG 1 cut(s) 883
MvnI CGCG 1 cut(s) 712
MwoI GCNNNNNNNGC 3 cut(s) 909, 1013, 1128
NcoI CCATGG 2 cut(s) 1071, 1109
NdeII GATC 5 cut(s) 209, 385, 542, 727, 775
NlaIII CATG 8 cut(s) 206, 275, 332, 506, 558, 1075, 1113, 1246
NlaIV GGNNCC 3 cut(s) 544, 777, 1204
NmuCI GTSAC 2 cut(s) 815, 1158
NspI RCATGY 1 cut(s) 1246
PaeI GCATGC 1 cut(s) 1246
PceI AGGCCT 2 cut(s) 886, 1051
PctI GAATGC 1 cut(s) 944
PdmI GAANNNNTTC 2 cut(s) 36, 786
PfeI GAWTC 2 cut(s) 946, 1009
PflMI CCANNNNNTGG 1 cut(s) 365
PkrI GCNGC 3 cut(s) 173, 307, 1174
PleI GAGTC 1 cut(s) 135
PpsI GAGTC 1 cut(s) 135
Psp6I CCWGG 1 cut(s) 881
PspEI GGTNACC 1 cut(s) 1158
PspGI CCWGG 1 cut(s) 881
PspN4I GGNNCC 3 cut(s) 544, 777, 1204
PstI CTGCAG 2 cut(s) 241, 592
PstNI CAGNNNCTG 1 cut(s) 587
PsuI RGATCY 3 cut(s) 209, 542, 775
RsaI GTAC 4 cut(s) 58, 155, 494, 1148
RsaNI GTAC 4 cut(s) 57, 154, 493, 1147
RseI CAYNNNNRTG 3 cut(s) 86, 276, 432
SaqAI TTAA 3 cut(s) 95, 396, 1259
SatI GCNGC 3 cut(s) 172, 306, 1173
Sau3AI GATC 5 cut(s) 209, 385, 542, 727, 775
ScaI AGTACT 1 cut(s) 155
SchI GAGTC 1 cut(s) 135
ScrFI CCNGG 1 cut(s) 883
SfaNI GCATC 5 cut(s) 587, 890, 949, 993, 1114
SfcI CTRYAG 3 cut(s) 237, 588, 823
SmiMI CAYNNNNRTG 3 cut(s) 86, 276, 432
SpeI ACTAGT 1 cut(s) 133
SphI GCATGC 1 cut(s) 1246
SseBI AGGCCT 2 cut(s) 886, 1051
SsiI CCGC 3 cut(s) 171, 845, 1172
SspI AATATT 1 cut(s) 1189
SspMI CTAG 6 cut(s) 134, 198, 599, 725, 842, 905
StuI AGGCCT 2 cut(s) 886, 1051
StyD4I CCNGG 1 cut(s) 881
StyI CCWWGG 3 cut(s) 286, 1071, 1109
TaaI ACNGT 1 cut(s) 994
TaiI ACGT 2 cut(s) 648, 822
TaqI TCGA 4 cut(s) 462, 516, 987, 1214
TaqII GACCGA 1 cut(s) 482
TatI WGTACW 3 cut(s) 56, 153, 492
TauI GCSGC 2 cut(s) 174, 1175
TfiI GAWTC 2 cut(s) 946, 1009
Tru1I TTAA 3 cut(s) 95, 396, 1259
Tru9I TTAA 3 cut(s) 95, 396, 1259
TscAI CASTG 1 cut(s) 753
TseFI GTSAC 2 cut(s) 815, 1158
TseI GCWGC 1 cut(s) 305
Tsp45I GTSAC 2 cut(s) 815, 1158
TspDTI ATGAA 8 cut(s) 70, 134, 294, 543, 706, 779, 1073, 1199
TspRI CASTG 1 cut(s) 753
Van91I CCANNNNNTGG 1 cut(s) 365
XapI RAATTY 1 cut(s) 951
XbaI TCTAGA 1 cut(s) 724
XceI RCATGY 1 cut(s) 1246
XmnI GAANNNNTTC 2 cut(s) 36, 786
XspI CTAG 6 cut(s) 134, 198, 599, 725, 842, 905
ZraI GACGTC 1 cut(s) 820
ZrmI AGTACT 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.