Rh6CG359100

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Reverse (-)
54793367 .. 54793936
570 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG359100.1

Sequence Viewer

Length: 570 bp
ATGAAAACACATCACAAGCCAAAGCAGATGCATCATCCCCTAAACTCCGATCTAAGGGATGCTCAGACACTTGTGGGCCTCTTAGCATCCCGTCCTTTCGGCACATCCCCGGGTTGTTTCTTTGATGACAACTTTTTCGTTTCCTGTAATACTACTACAAATAAAGCATTTCTCCGAGGAAGAAATAATGATTTAGCTATCCTCCACATATCACTGGATGATCACGAACTGCGTGTGTCTAGGCCCGTGACGAAAGCCTGCTTTGATGAGCAGGGAAATCCTCTCAAAAGGTGGATTACAGGGGAAGATGGGAGGGTAGAAACTCCCATGGTGACACCCTCTGACTACTTTTATATCTCAAGTACACGAAATAAGTTCACTACTGTTGGTTGCAATGCAAGCGCGATAATCGTGACCAGCACCCCTAGAGATTTGGGTAACAACAATGCAGATTTGGGATCTACATACCTGGACTCTTGTGCATCTTTGTGTCTTCCAGGAGTCAAGAAGGTGAAGAATGGAACTTGTGAACCCCCTTGGTGGATGTTGCCAGAAATCTATCACAATTAA

Protein Analysis

189

Amino Acids

21.09

Weight (kDa)

7.63

Isoelectric Point (pI)

51.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 404
AclWI GGATC 1 cut(s) 466
AfaI GTAC 1 cut(s) 364
AfiI CCNNNNNNNGG 2 cut(s) 54, 540
AjnI CCWGG 2 cut(s) 468, 496
AluBI AGCT 1 cut(s) 197
AluI AGCT 1 cut(s) 197
AlwI GGATC 1 cut(s) 466
Ama87I CYCGRG 1 cut(s) 109
AoxI GGCC 2 cut(s) 76, 242
ArsI GACNNNNNNTTYG 2 cut(s) 119, 151
AspLEI GCGC 1 cut(s) 404
AspS9I GGNCC 2 cut(s) 76, 243
AsuC2I CCSGG 2 cut(s) 110, 111
AsuHPI GGTGA 2 cut(s) 343, 523
AvaI CYCGRG 1 cut(s) 109
BbsI GAAGAC 1 cut(s) 485
BccI CCATC 1 cut(s) 302
BciT130I CCWGG 2 cut(s) 470, 498
BclI TGATCA 1 cut(s) 220
BcnI CCSGG 2 cut(s) 110, 111
BfaI CTAG 2 cut(s) 240, 426
Bme1390I CCNGG 4 cut(s) 110, 111, 470, 498
BmeT110I CYCGRG 1 cut(s) 109
BmgT120I GGNCC 2 cut(s) 76, 243
BmrFI CCNGG 4 cut(s) 110, 111, 470, 498
BmsI GCATC 5 cut(s) 18, 40, 49, 95, 491
BpiI GAAGAC 1 cut(s) 485
BpuEI CTTGAG 1 cut(s) 343
BpuMI CCSGG 2 cut(s) 110, 111
BsaJI CCNNGG 5 cut(s) 108, 109, 175, 327, 536
Bsc4I CCNNNNNNNGG 2 cut(s) 54, 540
Bse1I ACTGG 1 cut(s) 219
Bse3DI GCAATG 1 cut(s) 400
BseBI CCWGG 2 cut(s) 470, 498
BseDI CCNNGG 5 cut(s) 108, 109, 175, 327, 536
BseGI GGATG 6 cut(s) 34, 64, 86, 104, 223, 549
BseLI CCNNNNNNNGG 2 cut(s) 54, 540
BseMI GCAATG 1 cut(s) 400
BseMII CTCAG 1 cut(s) 77
BseNI ACTGG 1 cut(s) 219
Bsh1236I CGCG 1 cut(s) 404
BshFI GGCC 2 cut(s) 78, 244
BsiHKCI CYCGRG 1 cut(s) 109
BsiSI CCGG 1 cut(s) 110
BslI CCNNNNNNNGG 2 cut(s) 54, 540
BsnI GGCC 2 cut(s) 78, 244
BsoBI CYCGRG 1 cut(s) 109
Bsp143I GATC 3 cut(s) 49, 220, 458
Bsp19I CCATGG 1 cut(s) 327
BspANI GGCC 2 cut(s) 78, 244
BspCNI CTCAG 1 cut(s) 76
BspFNI CGCG 1 cut(s) 404
BspPI GGATC 1 cut(s) 466
BsrDI GCAATG 1 cut(s) 400
BsrI ACTGG 1 cut(s) 219
BssECI CCNNGG 5 cut(s) 108, 109, 175, 327, 536
BssMI GATC 3 cut(s) 49, 220, 458
BssT1I CCWWGG 2 cut(s) 327, 536
Bst2UI CCWGG 2 cut(s) 470, 498
Bst4CI ACNGT 1 cut(s) 385
BstC8I GCNNGC 2 cut(s) 259, 400
BstDEI CTNAG 3 cut(s) 53, 63, 82
BstDSI CCRYGG 1 cut(s) 327
BstF5I GGATG 6 cut(s) 34, 64, 86, 104, 223, 549
BstFNI CGCG 1 cut(s) 404
BstHHI GCGC 1 cut(s) 404
BstKTI GATC 3 cut(s) 52, 223, 461
BstMBI GATC 3 cut(s) 49, 220, 458
BstMWI GCNNNNNNNGC 1 cut(s) 399
BstNI CCWGG 2 cut(s) 470, 498
BstSCI CCNGG 4 cut(s) 108, 109, 468, 496
BstUI CGCG 1 cut(s) 404
BstV2I GAAGAC 1 cut(s) 485
BstX2I RGATCY 1 cut(s) 458
BstYI RGATCY 1 cut(s) 458
BsuRI GGCC 2 cut(s) 78, 244
BtgI CCRYGG 1 cut(s) 327
BtsCI GGATG 6 cut(s) 34, 64, 86, 104, 223, 549
BtsIMutI CAGTG 1 cut(s) 212
Cac8I GCNNGC 2 cut(s) 259, 400
CfoI GCGC 1 cut(s) 404
Cfr13I GGNCC 2 cut(s) 76, 243
Cfr9I CCCGGG 1 cut(s) 109
Csp6I GTAC 1 cut(s) 363
CviAII CATG 1 cut(s) 328
CviJI RGCY 5 cut(s) 19, 78, 197, 244, 257
CviKI_1 RGCY 5 cut(s) 19, 78, 197, 244, 257
CviQI GTAC 1 cut(s) 363
DdeI CTNAG 3 cut(s) 53, 63, 82
DpnI GATC 3 cut(s) 51, 222, 460
DpnII GATC 3 cut(s) 49, 220, 458
Eco130I CCWWGG 2 cut(s) 327, 536
Eco88I CYCGRG 1 cut(s) 109
EcoRII CCWGG 2 cut(s) 468, 496
EcoT14I CCWWGG 2 cut(s) 327, 536
EcoT22I ATGCAT 1 cut(s) 33
ErhI CCWWGG 2 cut(s) 327, 536
FaeI CATG 1 cut(s) 331
FaiI YATR 4 cut(s) 209, 329, 354, 466
FatI CATG 1 cut(s) 327
FbaI TGATCA 1 cut(s) 220
FokI GGATG 6 cut(s) 21, 71, 73, 91, 230, 556
FspBI CTAG 2 cut(s) 240, 426
GlaI GCGC 1 cut(s) 403
HaeIII GGCC 2 cut(s) 78, 244
HapII CCGG 1 cut(s) 110
HhaI GCGC 1 cut(s) 404
Hin1II CATG 1 cut(s) 331
Hin6I GCGC 1 cut(s) 402
HinP1I GCGC 1 cut(s) 402
HinfI GANTC 2 cut(s) 473, 501
HpaII CCGG 1 cut(s) 110
HphI GGTGA 2 cut(s) 343, 523
Hpy166II GTNNAC 3 cut(s) 365, 378, 530
Hpy188I TCNGA 4 cut(s) 49, 66, 176, 343
Hpy188III TCNNGA 3 cut(s) 224, 412, 505
Hpy8I GTNNAC 3 cut(s) 365, 378, 530
HpyAV CCTTC 1 cut(s) 502
HpyCH4III ACNGT 1 cut(s) 385
HpyCH4V TGCA 5 cut(s) 31, 393, 398, 449, 482
HpyF10VI GCNNNNNNNGC 1 cut(s) 399
HpyF3I CTNAG 3 cut(s) 53, 63, 82
Hsp92II CATG 1 cut(s) 331
HspAI GCGC 1 cut(s) 402
Ksp22I TGATCA 1 cut(s) 220
Kzo9I GATC 3 cut(s) 49, 220, 458
LweI GCATC 5 cut(s) 18, 40, 49, 95, 491
MaeI CTAG 2 cut(s) 240, 426
MaeIII GTNAC 4 cut(s) 247, 331, 412, 437
MalI GATC 3 cut(s) 51, 222, 460
MboI GATC 3 cut(s) 49, 220, 458
MboII GAAGA 4 cut(s) 192, 317, 485, 526
MflI RGATCY 1 cut(s) 458
MluCI AATT 1 cut(s) 565
MlyI GAGTC 2 cut(s) 467, 510
MnlI CCTC 6 cut(s) 89, 170, 212, 291, 306, 349
Mph1103I ATGCAT 1 cut(s) 33
MseI TTAA 1 cut(s) 568
MslI CAYNNNNRTG 1 cut(s) 487
MspI CCGG 1 cut(s) 110
MspR9I CCNGG 4 cut(s) 110, 111, 470, 498
MvaI CCWGG 2 cut(s) 470, 498
MvnI CGCG 1 cut(s) 404
MwoI GCNNNNNNNGC 1 cut(s) 399
NciI CCSGG 2 cut(s) 110, 111
NcoI CCATGG 1 cut(s) 327
NdeII GATC 3 cut(s) 49, 220, 458
NlaIII CATG 1 cut(s) 331
NmuCI GTSAC 3 cut(s) 247, 331, 412
NsiI ATGCAT 1 cut(s) 33
PfoI TCCNGGA 1 cut(s) 496
PleI GAGTC 2 cut(s) 467, 509
PpsI GAGTC 2 cut(s) 467, 509
Psp6I CCWGG 2 cut(s) 468, 496
PspGI CCWGG 2 cut(s) 468, 496
PspPI GGNCC 2 cut(s) 76, 243
PsuI RGATCY 1 cut(s) 458
RsaI GTAC 1 cut(s) 364
RsaNI GTAC 1 cut(s) 363
RseI CAYNNNNRTG 1 cut(s) 487
SaqAI TTAA 1 cut(s) 568
Sau3AI GATC 3 cut(s) 49, 220, 458
Sau96I GGNCC 2 cut(s) 76, 243
SchI GAGTC 2 cut(s) 467, 510
ScrFI CCNGG 4 cut(s) 110, 111, 470, 498
SetI ASST 4 cut(s) 199, 293, 471, 513
SfaNI GCATC 5 cut(s) 18, 40, 49, 95, 491
SmaI CCCGGG 1 cut(s) 111
SmiMI CAYNNNNRTG 1 cut(s) 487
SmlI CTYRAG 1 cut(s) 358
SmoI CTYRAG 1 cut(s) 358
Sse9I AATT 1 cut(s) 565
SspMI CTAG 2 cut(s) 240, 426
StyD4I CCNGG 4 cut(s) 108, 109, 468, 496
StyI CCWWGG 2 cut(s) 327, 536
TaaI ACNGT 1 cut(s) 385
TasI AATT 1 cut(s) 565
TatI WGTACW 1 cut(s) 362
Tru1I TTAA 1 cut(s) 568
Tru9I TTAA 1 cut(s) 568
TscAI CASTG 1 cut(s) 219
TseFI GTSAC 3 cut(s) 247, 331, 412
Tsp45I GTSAC 3 cut(s) 247, 331, 412
TspDTI ATGAA 1 cut(s) 17
TspMI CCCGGG 1 cut(s) 109
TspRI CASTG 1 cut(s) 219
XmaI CCCGGG 1 cut(s) 109
XspI CTAG 2 cut(s) 240, 426
Zsp2I ATGCAT 1 cut(s) 33
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.