Rmu_sc0001235.1_g000016

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001235.1
OG0000066
Physical Location & Seq
Forward (+)
77723 .. 85026
7304 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001235.1_g000016.1.cds

Sequence Viewer

Length: 3939 bp
atggccttgcatgtgatgttcattatgcaactctcattgatgggagtactactggtcatattagcagcagctgatcaagctctcctgcctcaagctctgcctggctgcactgactgctgcggtgatctcgtaattccatacccatttggcataggtgaaggttgttaccttcgacaagaatttcaaatcacttgtgaccaatcaacccaacccccatcagcaaactggacaggcactaatatccgcatcgctaacttctggcttgcagagggtgagttgcaaataaacagttacaccgcccgagattgttatgaccagcaaggcgaaagaacctaccacaacagccctgagttatcgctggttccgccttacaccatatccgataccaaaaacaagttcatcgcagttggatgcgacacttatgcaatctttacaggataccaaggggaagaaaggtacataaccgggtgcatgtccttgtgtaacagccttggcagcgtcgatgggtcttgctctggcattggatgttgccaaacctccatccctagtggaatgacaaaccgtactgtcactttgagtagctattataatcactctgatatatggagcttcaacccctgcagctacgcattcattgtgcaagaaggccagtttagtttctctaatacaagttttcaagaactgaacatcactaaacaactgccgatggttcttaactgggcaattgggaatgaaccagacccatgtgatgcagctgaaaagagggaggactttgcatgcaacaaaaatagcaagtgtgtcaaccacaacaacaggaatggttatgtttgtgaatgtttaccaggctacgaaggcaatccataccttccagatggttgccaaggtgtcagtctaggcttcttgggtatattggttggaatttcatggatatattgggcaatgaagaaaagagatttcatcaaactcaaagagaagtacttcagaaaaaatggtggattactgttacagcaacaactcgctagacatggaatggagacagcaaaactctatagtgcagaagaacttgagaaggccacaaactattaccatgcaagtacagtccttggtgaaggaagctatggaacagtctacaaaggaatactaccagataacaaagaggtcgctattaaaaagtccaaaattggtgctcgtgctcagagcgatcagtttgttaatgaggtgataattgtttctcaaataaaccacagaaatgtggtgaggttattaggttgttgcttagagacagaagtgcctttactggtttatgagttcatcaggtgtggaactctttctgagcacattcataaagaaaccaaaggatcatcactgtcattgggtttacgactgaagatagcagcagaaaccgcaggagcactagcatacttacactcgtccacttccatgccaatcattcaccgagatgtcaaagcaacgaatatactattggacgaaaattacacagcaaaagtgtcagattttggagcttcacgattggttcctctagatcaaaaccaactatcaactttagtgcaagggacacttggatacctagaccctgaatacttacttaccaatcagctaacagaaaagagtgatgtttatagctttggagttgttcttgtggaactgcttactagtcaagttccactttcttttgaccgccgtgaggaagagagaagcctagcaagcttctttgttcgttcaatagaggaggatcacttaaaagaaatttttgatggtgacatagttgatgatggacatgttgatgagacactaaaaaatatggctaatcttgcaaaaagatgtttgagactaaaaggcgaggaaaggcctaccatgaaagaagtagccacagagctagatggaatgagaattacgataatgtatccatgcggtaaagctgatttcggttcagaagagactgagaatttggagacgaatgctgttgctgttaaaggtgacggttgttacttgcgaccagaattcaacatcacttgtgaccattccaccacacctccatcagcaaacttcacgaattatagcatacgtattgctcacatatcccttgctgagggtgagttgcgaataatgcaagacgtaggtgtagaatgttatgacacccagggtcgtgaaacggactataactggccttctctccagttgcctcctccttataccatctctgataccaaaaacaagttctttgacattggctgtggcactgtagctatttttcaaggtgaccgcacgcaccctgggccagatgaagataagtccacagcggggtacaccatggtcttatgtgatgatctgcttggcaaagtacttacaaactcttgcaatggcgttggctgttcccaggttcctatcccaagtggattgcacaactttacaataattctgagttcaattgcggataatacaggtacatggttgactaggtatccttgtagctattccttcattgtggaagtagccatgttcacattctcccccgatacaagttttgatttactgaataccaccagccagcttccactcattgttaattgggggattggggatgaaccatgtgatgaaaagagccagaattatgcatgcaaggcagaaaatagcaagtgtgtcaaccagtccatcattaatgggccgtctggttacatttgccaatgcttaccaggctacgaagggaatccatacctcgaagatgggtgccaaggtgtaagtgtaggcttcttggtttttttcattggaatttcatggacatcttggggaataaagaaaagaaacttcattaagctcaaagagaggtactttaaagaaaatggtggtttgttattgcaaaaacaactctttcatcatggaggctttgtggagacaacaagaatttttactgcagaagaacttgagaaggccacaaacaattaccatgaaagtagagtccttggtgagggaggatatggaaccgtttataaaggcatactactagataacaaagtggttgccattaaaaagtctaaaattgctgccccggcccagagtgatcaatttgttaatgaggtgattattctttctcaaatcaatcacagaaatgtagtcaggctattaggttgttgcttagagacagaaacacctttactgatttatgagttcatcaccaatggcactctttatgagcacattcataagaaaagatcactactttctttggaattacgaatgaagatagcagctgaaactgcgggagcactagcatacctacattcctcaacttccatgccaattatacatcgagatgtgaaagcaatgaatatactattagatgataactatacagcaaaagtggcagactttggagcgtcaagattgattcctttaggtcaaactgaattagaaactttagtactagggacatttggttacctcgaccctgaatatttgcaatcaaaccaactaacagaaaagagtgacgtttacagctttggagttgtcctgctggagctaataactagcaaagtggcactttgtacaaatagatgcttagcaagcatcttcatctctgccatggaagaaggttggctggatcaaattcttgatgataatatagtgaatgatggaaatatggagatggtaaaaatagtagccaatcttgcaaaaagatgtttaagtgtaaaagggcaggagaggccaaccatgaaagaggtagcaatggagctagaaggaatgagaatgatggcaaagcatccatggagaaacaatgctgatttctgtccagaagagaacgagagtttgctcagttcacttgatgcaaacactcacgtggtggatgttagaggtgatggtggttctggcagtacaagtgtacaactaccaggtttgacagcatgcaaatccaaatgttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK hEGF

Protein Analysis

1312

Amino Acids

145.39

Weight (kDa)

5.16

Isoelectric Point (pI)

33.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 588, 3009
AccB1I GGYRCC 1 cut(s) 2748
AccI GTMKAC 1 cut(s) 1128
AclWI GGATC 3 cut(s) 1366, 1761, 3627
AcsI RAATTY 8 cut(s) 179, 918, 1767, 1966, 2021, 2790, 2922, 3624
AcuI CTGAAG 2 cut(s) 964, 1406
AcvI CACGTG 1 cut(s) 3856
AdeI CACNNNGTG 1 cut(s) 3859
AfiI CCNNNNNNNGG 4 cut(s) 1705, 2110, 2322, 2986
AflIII ACRYGT 1 cut(s) 1798
AgsI TTSAA 7 cut(s) 185, 613, 677, 1743, 2026, 2276, 2448
AhlI ACTAGT 1 cut(s) 1673
AjnI CCWGG 7 cut(s) 100, 841, 2160, 2293, 2397, 2713, 3907
AjuI GAANNNNNNNTTGG 6 cut(s) 380, 412, 1466, 1498, 2222, 2254
AleI CACNNNNGTG 1 cut(s) 3854
Alw21I GWGCWC 6 cut(s) 1189, 1195, 1338, 1414, 3216, 3286
Alw26I GTCTC 8 cut(s) 1028, 1274, 1802, 1843, 1952, 1967, 2906, 3152
AlwI GGATC 3 cut(s) 1366, 1761, 3627
AlwNI CAGNNNCTG 1 cut(s) 71
Ama87I CYCGRG 1 cut(s) 300
ApoI RAATTY 8 cut(s) 179, 918, 1767, 1966, 2021, 2790, 2922, 3624
ArsI GACNNNNNNTTYG 2 cut(s) 1951, 1983
AseI ATTAAT 1 cut(s) 2679
Asp700I GAANNNNTTC 2 cut(s) 977, 1327
AspS9I GGNCC 3 cut(s) 2297, 2684, 3070
AsuC2I CCSGG 2 cut(s) 466, 3068
AvaI CYCGRG 1 cut(s) 300
BanI GGYRCC 1 cut(s) 2748
BarI GAAGNNNNNNTAC 2 cut(s) 1278, 1310
BauI CACGAG 1 cut(s) 1188
BbrPI CACGTG 1 cut(s) 3856
Bbv12I GWGCWC 6 cut(s) 1189, 1195, 1338, 1414, 3216, 3286
BbvCI CCTCAGC 1 cut(s) 2109
BceAI ACGGC 2 cut(s) 1686, 2671
BcgI CGANNNNNNTGC 2 cut(s) 404, 438
BciT130I CCWGG 7 cut(s) 102, 843, 2162, 2295, 2399, 2715, 3909
BciVI GTATCC 4 cut(s) 431, 1577, 1935, 2493
BclI TGATCA 2 cut(s) 73, 3079
BcnI CCSGG 2 cut(s) 466, 3068
BcoDI GTCTC 8 cut(s) 1028, 1274, 1802, 1843, 1952, 1967, 2906, 3152
BcuI ACTAGT 1 cut(s) 1673
BfmI CTRYAG 4 cut(s) 619, 1048, 2262, 2931
BfuI GTATCC 4 cut(s) 431, 1577, 1935, 2493
BlpI GCTNAGC 1 cut(s) 3577
BmcAI AGTACT 4 cut(s) 48, 977, 2364, 3441
Bme1390I CCNGG 9 cut(s) 102, 466, 843, 2162, 2295, 2399, 2715, 3068, 3909
BmeT110I CYCGRG 1 cut(s) 300
BmgT120I GGNCC 3 cut(s) 2297, 2684, 3070
BmiI GGNNCC 5 cut(s) 363, 1536, 2403, 2750, 3001
BmrFI CCNGG 9 cut(s) 102, 466, 843, 2162, 2295, 2399, 2715, 3068, 3909
BmrI ACTGGG 1 cut(s) 727
BmsI GCATC 7 cut(s) 255, 401, 739, 3563, 3594, 3787, 3832
BmuI ACTGGG 1 cut(s) 727
BpmI CTGGAG 2 cut(s) 2180, 3554
Bpu10I CCTNAGC 1 cut(s) 2109
Bpu1102I GCTNAGC 1 cut(s) 3577
BpuEI CTTGAG 3 cut(s) 75, 1085, 2963
BpuMI CCSGG 2 cut(s) 466, 3068
BsaAI YACGTR 2 cut(s) 2087, 3856
BsaXI ACNNNNNCTCC 4 cut(s) 2038, 2068, 2892, 2922
Bsc4I CCNNNNNNNGG 4 cut(s) 1705, 2110, 2322, 2986
Bse1I ACTGG 8 cut(s) 57, 230, 649, 722, 1302, 2189, 2197, 2668
Bse3DI GCAATG 4 cut(s) 945, 2386, 3348, 3750
BseBI CCWGG 7 cut(s) 102, 843, 2162, 2295, 2399, 2715, 3909
BseGI GGATG 6 cut(s) 416, 530, 540, 2608, 3778, 3868
BseLI CCNNNNNNNGG 4 cut(s) 1705, 2110, 2322, 2986
BseMI GCAATG 4 cut(s) 945, 2386, 3348, 3750
BseMII CTCAG 7 cut(s) 339, 1208, 1323, 1953, 2100, 2432, 3844
BseNI ACTGG 8 cut(s) 57, 230, 649, 722, 1302, 2189, 2197, 2668
BseRI GAGGAG 2 cut(s) 1763, 2196
BsgI GTGCAG 2 cut(s) 91, 1074
BshNI GGYRCC 1 cut(s) 2748
BsiHKAI GWGCWC 6 cut(s) 1189, 1195, 1338, 1414, 3216, 3286
BsiHKCI CYCGRG 1 cut(s) 300
BsiSI CCGG 2 cut(s) 465, 3068
BslFI GGGAC 2 cut(s) 1588, 3460
BslI CCNNNNNNNGG 4 cut(s) 1705, 2110, 2322, 2986
BsmAI GTCTC 8 cut(s) 1028, 1274, 1802, 1843, 1952, 1967, 2906, 3152
BsmBI CGTCTC 1 cut(s) 1967
BsmFI GGGAC 2 cut(s) 1588, 3460
BsmI GAATGC 2 cut(s) 629, 1984
BsoBI CYCGRG 1 cut(s) 300
Bsp1286I GDGCHC 6 cut(s) 1189, 1195, 1338, 1414, 3216, 3286
Bsp1407I TGTACA 2 cut(s) 3563, 3898
Bsp1720I GCTNAGC 1 cut(s) 3577
Bsp19I CCATGG 3 cut(s) 2331, 3600, 3782
BspCNI CTCAG 7 cut(s) 340, 1207, 1324, 1954, 2101, 2433, 3843
BspLI GGNNCC 5 cut(s) 363, 1536, 2403, 2750, 3001
BspMAI CTGCAG 2 cut(s) 623, 2935
BspPI GGATC 3 cut(s) 1366, 1761, 3627
BspT107I GGYRCC 1 cut(s) 2748
BsrDI GCAATG 4 cut(s) 945, 2386, 3348, 3750
BsrGI TGTACA 2 cut(s) 3563, 3898
BsrI ACTGG 8 cut(s) 57, 230, 649, 722, 1302, 2189, 2197, 2668
BssSI CACGAG 1 cut(s) 1188
BssT1I CCWWGG 9 cut(s) 442, 490, 880, 1102, 2331, 2752, 2980, 3600, 3782
Bst2BI CACGAG 1 cut(s) 1188
Bst2UI CCWGG 7 cut(s) 102, 843, 2162, 2295, 2399, 2715, 3909
Bst6I CTCTTC 3 cut(s) 1704, 1950, 3807
BstAPI GCANNNNNTGC 1 cut(s) 114
BstAUI TGTACA 2 cut(s) 3563, 3898
BstBAI YACGTR 2 cut(s) 2087, 3856
BstC8I GCNNGC 8 cut(s) 264, 778, 1726, 2288, 2570, 2638, 3583, 3922
BstDSI CCRYGG 3 cut(s) 2331, 3600, 3782
BstEII GGTNACC 2 cut(s) 2279, 3455
BstENI CCTNNNNNAGG 2 cut(s) 2108, 2984
BstF5I GGATG 6 cut(s) 416, 530, 540, 2608, 3778, 3868
BstMAI GTCTC 8 cut(s) 1028, 1274, 1802, 1843, 1952, 1967, 2906, 3152
BstNI CCWGG 7 cut(s) 102, 843, 2162, 2295, 2399, 2715, 3909
BstNSI RCATGY 6 cut(s) 14, 475, 780, 1802, 2640, 3924
BstPI GGTNACC 2 cut(s) 2279, 3455
BstSCI CCNGG 9 cut(s) 100, 464, 841, 2160, 2293, 2397, 2713, 3066, 3907
BstSFI CTRYAG 4 cut(s) 619, 1048, 2262, 2931
BstSNI TACGTA 1 cut(s) 2087
BsuI GTATCC 4 cut(s) 431, 1577, 1935, 2493
BtgI CCRYGG 3 cut(s) 2331, 3600, 3782
BtgZI GCGATG 2 cut(s) 232, 385
BtsCI GGATG 6 cut(s) 416, 530, 540, 2608, 3778, 3868
BtsIMutI CAGTG 3 cut(s) 108, 1364, 2259
Cac8I GCNNGC 8 cut(s) 264, 778, 1726, 2288, 2570, 2638, 3583, 3922
CaiI CAGNNNCTG 1 cut(s) 71
Cfr13I GGNCC 3 cut(s) 2297, 2684, 3070
CseI GACGC 2 cut(s) 487, 3384
CsiI ACCWGGT 1 cut(s) 3907
DraI TTTAAA 1 cut(s) 2854
DraIII CACNNNGTG 1 cut(s) 3859
Eam1104I CTCTTC 3 cut(s) 1704, 1950, 3807
EarI CTCTTC 3 cut(s) 1704, 1950, 3807
EciI GGCGGA 1 cut(s) 354
Eco105I TACGTA 1 cut(s) 2087
Eco130I CCWWGG 9 cut(s) 442, 490, 880, 1102, 2331, 2752, 2980, 3600, 3782
Eco147I AGGCCT 1 cut(s) 1870
Eco57I CTGAAG 2 cut(s) 964, 1406
Eco72I CACGTG 1 cut(s) 3856
Eco88I CYCGRG 1 cut(s) 300
Eco91I GGTNACC 2 cut(s) 2279, 3455
EcoNI CCTNNNNNAGG 2 cut(s) 2108, 2984
EcoO65I GGTNACC 2 cut(s) 2279, 3455
EcoRI GAATTC 1 cut(s) 2021
EcoRII CCWGG 7 cut(s) 100, 841, 2160, 2293, 2397, 2713, 3907
EcoT14I CCWWGG 9 cut(s) 442, 490, 880, 1102, 2331, 2752, 2980, 3600, 3782
EcoT22I ATGCAT 1 cut(s) 2638
ErhI CCWWGG 9 cut(s) 442, 490, 880, 1102, 2331, 2752, 2980, 3600, 3782
Esp3I CGTCTC 1 cut(s) 1967
FalI AAGNNNNNCTT 6 cut(s) 1563, 1595, 1671, 1703, 3543, 3575
FaqI GGGAC 2 cut(s) 1588, 3460
FauI CCCGC 2 cut(s) 2314, 3271
FbaI TGATCA 2 cut(s) 73, 3079
FblI GTMKAC 1 cut(s) 1128
FokI GGATG 6 cut(s) 423, 527, 537, 2615, 3765, 3875
GsuI CTGGAG 2 cut(s) 2180, 3554
HapII CCGG 2 cut(s) 465, 3068
HgaI GACGC 2 cut(s) 487, 3384
HincII GTYRAC 3 cut(s) 802, 2475, 2665
HindII GTYRAC 3 cut(s) 802, 2475, 2665
HindIII AAGCTT 1 cut(s) 1726
HinfI GANTC 3 cut(s) 2728, 2976, 3406
HpaII CCGG 2 cut(s) 465, 3068
Hpy188I TCNGA 9 cut(s) 382, 598, 983, 1197, 1333, 1513, 1954, 2224, 2442
Hpy99I CGWCG 1 cut(s) 503
HpyCH4IV ACGT 4 cut(s) 2086, 2136, 3507, 3855
HpySE526I ACGT 4 cut(s) 2086, 2136, 3507, 3855
Ksp22I TGATCA 2 cut(s) 73, 3079
LmnI GCTCC 7 cut(s) 606, 1409, 1520, 3281, 3392, 3535, 3748
LweI GCATC 7 cut(s) 255, 401, 739, 3563, 3594, 3787, 3832
MabI ACCWGGT 1 cut(s) 3907
MaeII ACGT 4 cut(s) 2086, 2136, 3507, 3855
MfeI CAATTG 2 cut(s) 723, 2448
MhlI GDGCHC 6 cut(s) 1189, 1195, 1338, 1414, 3216, 3286
MlyI GAGTC 1 cut(s) 2985
MmeI TCCRAC 2 cut(s) 388, 895
Mph1103I ATGCAT 1 cut(s) 2638
MroXI GAANNNNTTC 2 cut(s) 977, 1327
MslI CAYNNNNRTG 7 cut(s) 1248, 1439, 1458, 1803, 3126, 3330, 3854
MspA1I CMGCKG 4 cut(s) 71, 755, 2321, 3269
MspI CCGG 2 cut(s) 465, 3068
MspR9I CCNGG 9 cut(s) 102, 466, 843, 2162, 2295, 2399, 2715, 3068, 3909
MunI CAATTG 2 cut(s) 723, 2448
Mva1269I GAATGC 2 cut(s) 629, 1984
MvaI CCWGG 7 cut(s) 102, 843, 2162, 2295, 2399, 2715, 3909
NciI CCSGG 2 cut(s) 466, 3068
NcoI CCATGG 3 cut(s) 2331, 3600, 3782
NlaIV GGNNCC 5 cut(s) 363, 1536, 2403, 2750, 3001
NmuCI GTSAC 7 cut(s) 194, 568, 1778, 1997, 2036, 2279, 3503
NsiI ATGCAT 1 cut(s) 2638
NspI RCATGY 6 cut(s) 14, 475, 780, 1802, 2640, 3924
OliI CACNNNNGTG 1 cut(s) 3854
PaeI GCATGC 3 cut(s) 780, 2640, 3924
PasI CCCWGGG 2 cut(s) 2161, 2294
PceI AGGCCT 1 cut(s) 1870
PciI ACATGT 1 cut(s) 1798
PctI GAATGC 2 cut(s) 629, 1984
PdmI GAANNNNTTC 2 cut(s) 977, 1327
PfeI GAWTC 2 cut(s) 2728, 3406
PleI GAGTC 1 cut(s) 2984
PmaCI CACGTG 1 cut(s) 3856
PmlI CACGTG 1 cut(s) 3856
PpsI GAGTC 1 cut(s) 2984
Ppu21I YACGTR 2 cut(s) 2087, 3856
PscI ACATGT 1 cut(s) 1798
PshBI ATTAAT 1 cut(s) 2679
PsiI TTATAA 2 cut(s) 588, 3009
Psp6I CCWGG 7 cut(s) 100, 841, 2160, 2293, 2397, 2713, 3907
PspCI CACGTG 1 cut(s) 3856
PspEI GGTNACC 2 cut(s) 2279, 3455
PspGI CCWGG 7 cut(s) 100, 841, 2160, 2293, 2397, 2713, 3907
PspN4I GGNNCC 5 cut(s) 363, 1536, 2403, 2750, 3001
PspPI GGNCC 3 cut(s) 2297, 2684, 3070
PstI CTGCAG 2 cut(s) 623, 2935
PstNI CAGNNNCTG 1 cut(s) 71
PvuII CAGCTG 3 cut(s) 71, 755, 3269
RseI CAYNNNNRTG 7 cut(s) 1248, 1439, 1458, 1803, 3126, 3330, 3854
Sau96I GGNCC 3 cut(s) 2297, 2684, 3070
ScaI AGTACT 4 cut(s) 48, 977, 2364, 3441
SchI GAGTC 1 cut(s) 2985
ScrFI CCNGG 9 cut(s) 102, 466, 843, 2162, 2295, 2399, 2715, 3068, 3909
SduI GDGCHC 6 cut(s) 1189, 1195, 1338, 1414, 3216, 3286
SexAI ACCWGGT 1 cut(s) 3907
SfaNI GCATC 7 cut(s) 255, 401, 739, 3563, 3594, 3787, 3832
SfcI CTRYAG 4 cut(s) 619, 1048, 2262, 2931
SmiMI CAYNNNNRTG 7 cut(s) 1248, 1439, 1458, 1803, 3126, 3330, 3854
SmlI CTYRAG 3 cut(s) 90, 1064, 2942
SmoI CTYRAG 3 cut(s) 90, 1064, 2942
SnaBI TACGTA 1 cut(s) 2087
SpeI ACTAGT 1 cut(s) 1673
SphI GCATGC 3 cut(s) 780, 2640, 3924
SseBI AGGCCT 1 cut(s) 1870
SspI AATATT 1 cut(s) 3473
StuI AGGCCT 1 cut(s) 1870
StyD4I CCNGG 9 cut(s) 100, 464, 841, 2160, 2293, 2397, 2713, 3066, 3907
StyI CCWWGG 9 cut(s) 442, 490, 880, 1102, 2331, 2752, 2980, 3600, 3782
TaiI ACGT 4 cut(s) 2089, 2139, 3510, 3858
TaqI TCGA 5 cut(s) 172, 501, 2739, 3328, 3462
TatI WGTACW 8 cut(s) 46, 975, 1094, 2362, 3439, 3563, 3890, 3898
TfiI GAWTC 2 cut(s) 2728, 3406
TscAI CASTG 3 cut(s) 115, 1371, 2266
TseFI GTSAC 7 cut(s) 194, 568, 1778, 1997, 2036, 2279, 3503
Tsp45I GTSAC 7 cut(s) 194, 568, 1778, 1997, 2036, 2279, 3503
TspGWI ACGGA 1 cut(s) 2189
TspRI CASTG 3 cut(s) 115, 1371, 2266
VspI ATTAAT 1 cut(s) 2679
XagI CCTNNNNNAGG 2 cut(s) 2108, 2984
XapI RAATTY 8 cut(s) 179, 918, 1767, 1966, 2021, 2790, 2922, 3624
XbaI TCTAGA 1 cut(s) 1540
XceI RCATGY 6 cut(s) 14, 475, 780, 1802, 2640, 3924
XcmI CCANNNNNNNNNTGG 1 cut(s) 222
XmiI GTMKAC 1 cut(s) 1128
XmnI GAANNNNTTC 2 cut(s) 977, 1327
ZrmI AGTACT 4 cut(s) 48, 977, 2364, 3441
Zsp2I ATGCAT 1 cut(s) 2638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.