FvH4_3g10560
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000066
Physical Location & Seq
Reverse (-)
6287401 .. 6290329
2929 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10560.t1

Sequence Viewer

Length: 2082 bp
ATGGAGGTGCCGGAACAAGATGAACAGAAATTCAAGGTCACCTGTGACCAGGCCACCACGCCACCGTTACTCAAGTTCTTGAACGGTGATATCCTCAACCAAAGCATTACTAACATTTCTGTAGGTGAGAGTGAGATGCAAGTAATGCTGCCCACATCCCGGAACTGCTACACCGACGGTTACTACAACGATTCTTTGTACAGAAACAGTGAGCTCATCCTCCCCTCTGGTTACACCATCTCTGATAAGAACAAGGTTTATATCATTGGATGTAACAAAATAGCACTATACCAAGGTTTAGTTACCCAAGTCGAGCCAGAGCGAACAGAAATCGAGAAGCTGGGGACAACCGGCGTGAGCTTGTGCCAAGATCTACTCGGAGCGTTGTCCAACAATTGCAGTGGCGTCGGGTGTACCCAAAGGACCATCATAAGTGGACTTCACAGTATTAACTTGGATGTGTGGACAATCGGTGCAGGCCTTGGAAGCACATCACAGTGGACACTAGACTACCCGTGCAGCTACGGTTTCATTGTGGATGATCGCAATTTCACCTTCGCAGGGAATGCAACTTTTAAAGAGATGGACAGCCGCACAAACGCGCCGAAGCTTCCGGTGACTGTTAACTGGGAAATTGGAAAGAACAACTGTGAAGTTGCCCTCAATAATCAAACTTCTTATGCATGCAAGGCCGCAAATACTGAATGTGTCAACGGCACTTCAGGTGGATATTTCTGCCGCTGCCAGAAAGGTTACCAAGGGAACCCTTACGTGCTTGGTGGTTGCGAAGGTATCTGTTTGAGCTTCCTAGTCGTATTAATTATAACATTTTGGATATACTGCGGAATGAAAAGAAGAAAGTTCAAGCAACTCAAAGAGAAGTACTTCAAAGACAATGGTGGCTTCTTTTGGTTTGGTGCTTGTTTGGAACTCAGATACATGAAGGTGCAGCAAGTTTCTCTTGCCTTCTTCTCCGATCTCGGCCGGATCGCGACTCCAGTTTTGTGGTCGGCGGCGCTGTCGTGGAAAGAAGAGCTTAAGAAGGCCACAAACAACTTCGATGACCGCGGAAAAATTGGCGAAGGAGGCTACGGATTTGTTTTCAAAGGAACATTGACGGATAGAAAGGAGGTTGCCATAAAGGTGTCGAAGAGTAATGCCCCAATGACCCAAAGTAATCAGTTCATCAATGAGGTGATTGTTCTTTCACAAATCAACCATAGAAATGTGGTGAGGCTCCTAGGTTGTTGCTTAGAGACTCAAACTCCTTTGTTAGTTTACGAGTTTGTTAGCAATGGCACACTTTATGAGCACATTCATAAGAAGAATGGCAAGGGTCCGCTTTCTTTTGGGTTACGAATGAAGATAGCAGCAGAAACTGCAGGATCTCTAGCATACTTGCACTACTCCACTTCCATGCAAATCGTGCACCGAGATGTGAAAGCAACCAATATACTATTGGATGAGAATTTCACAGCCAAAGTATCAGACTTTGGAGCTTCGAAATTGGTTCCTGAAGATCAAAATCAGCTGTCCACTTTAGTACAAGGAACGCTGGGTTACCTAGACCCTGAATATCTCCAGTCAAACACACTGACAGAAAAGAGTGATGTCTATAGCTTCGGCGTTGTTCGTGTTGAGCTTATAACGAGTCAAGTGGCAATTTCTCACAAGAAGCCTGAGGCAGAGAGAAACCTAGCGAACTGTTTTGTAACGTCGGTGGAAGAGAATCGCTTGGCTGATATTCTTGATCTTGAAATTATCAAGGAGGGAAGCTTTGAAATAGCTGAACAAGTAGCCCATCTCGCCAAAAGAAGTTTAAGTTTGAAAGGAGGAGATAGGCCTACCATGAAAGAAGTAGCAATGGAGCTAGAGGTAATACTGGCTGTTATGGCAAAGCATCCTGGAGGAAAGCCCGACTCCTCCCCCAAAGAGACCGATTACTTGCTTGCAGCGTCACCTTCAAACGCTTACGTTGTTGATGTTAGAAGTGATGAAGGTGAAGTCATAACCAGCATAGATTATGACCAGAGCATGCATAATCAATCCCAGATGATGAAGCCTTATGATGGTGGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

694

Amino Acids

76.84

Weight (kDa)

5.75

Isoelectric Point (pI)

31.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 355 - 620 1.3e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 358 - 623 1.9e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 824, 1646
AccB1I GGYRCC 1 cut(s) 7
AccII CGCG 3 cut(s) 602, 992, 1068
AciI CCGC 8 cut(s) 592, 693, 739, 843, 1013, 1066, 1068, 1340
AclWI GGATC 2 cut(s) 995, 1393
AcoI YGGCCR 1 cut(s) 982
AcsI RAATTY 2 cut(s) 29, 1468
AcuI CTGAAG 2 cut(s) 705, 1536
AcyI GRCGYC 1 cut(s) 405
AfaI GTAC 4 cut(s) 200, 415, 884, 1545
AfiI CCNNNNNNNGG 3 cut(s) 159, 561, 2069
AflII CTTAAG 1 cut(s) 1037
AgsI TTSAA 9 cut(s) 34, 82, 865, 889, 1105, 1757, 1781, 1828, 1965
AjnI CCWGG 2 cut(s) 48, 1903
Alw21I GWGCWC 3 cut(s) 216, 1314, 1431
Alw26I GTCTC 2 cut(s) 1250, 1928
Alw44I GTGCAC 1 cut(s) 1427
AlwI GGATC 2 cut(s) 995, 1393
AlwNI CAGNNNCTG 1 cut(s) 1379
AoxI GGCC 6 cut(s) 51, 478, 690, 982, 1044, 1841
ApaLI GTGCAC 1 cut(s) 1427
ApeKI GCWGC 6 cut(s) 148, 519, 741, 949, 1370, 1952
ApoI RAATTY 2 cut(s) 29, 1468
ArsI GACNNNNNNTTYG 2 cut(s) 985, 1017
AseI ATTAAT 1 cut(s) 818
Asp700I GAANNNNTTC 1 cut(s) 884
AspA2I CCTAGG 1 cut(s) 1240
AspLEI GCGC 2 cut(s) 604, 1018
AspS9I GGNCC 2 cut(s) 423, 1337
AsuC2I CCSGG 1 cut(s) 160
AsuHPI GGTGA 9 cut(s) 31, 98, 137, 544, 628, 1207, 1243, 1950, 2012
AsuII TTCGAA 1 cut(s) 1502
AvaII GGWCC 2 cut(s) 423, 1337
AvrII CCTAGG 1 cut(s) 1240
AxyI CCTNAGG 1 cut(s) 1680
BaeGI GKGCMC 1 cut(s) 1431
BanI GGYRCC 1 cut(s) 7
BanII GRGCYC 1 cut(s) 216
Bbv12I GWGCWC 3 cut(s) 216, 1314, 1431
BbvI GCAGC 6 cut(s) 135, 531, 728, 961, 1382, 1964
BccI CCATC 5 cut(s) 245, 434, 577, 1809, 2063
BceAI ACGGC 1 cut(s) 730
BcgI CGANNNNNNTGC 2 cut(s) 388, 422
BciT130I CCWGG 2 cut(s) 50, 1905
BcnI CCSGG 1 cut(s) 160
BcoDI GTCTC 2 cut(s) 1250, 1928
BfaI CTAG 7 cut(s) 506, 809, 1241, 1391, 1565, 1697, 1871
BfmI CTRYAG 3 cut(s) 120, 1380, 1615
BfoI RGCGCY 1 cut(s) 1019
BfrI CTTAAG 1 cut(s) 1037
BglII AGATCT 1 cut(s) 370
BlnI CCTAGG 1 cut(s) 1240
BmcAI AGTACT 1 cut(s) 884
Bme1390I CCNGG 3 cut(s) 50, 160, 1905
Bme18I GGWCC 2 cut(s) 423, 1337
BmgT120I GGNCC 2 cut(s) 423, 1337
BmiI GGNNCC 5 cut(s) 9, 764, 1238, 1338, 1512
BmrFI CCNGG 3 cut(s) 50, 160, 1905
BmrI ACTGGG 1 cut(s) 637
BmsI GCATC 2 cut(s) 126, 1909
BmuI ACTGGG 1 cut(s) 637
BpmI CTGGAG 3 cut(s) 981, 1565, 1926
Bpu14I TTCGAA 1 cut(s) 1502
BpuEI CTTGAG 1 cut(s) 56
BpuMI CCSGG 1 cut(s) 160
BsaAI YACGTR 1 cut(s) 772
BsaBI GATNNNNATC 1 cut(s) 1524
BsaHI GRCGYC 1 cut(s) 405
BsaI GGTCTC 1 cut(s) 1928
BsaJI CCNNGG 5 cut(s) 292, 481, 757, 1066, 1240
BsaWI WCCGGW 1 cut(s) 613
BsaXI ACNNNNNCTCC 2 cut(s) 1249, 1279
Bsc4I CCNNNNNNNGG 3 cut(s) 159, 561, 2069
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 4 cut(s) 632, 998, 1582, 1887
Bse21I CCTNAGG 1 cut(s) 1680
Bse3DI GCAATG 2 cut(s) 1300, 1869
Bse8I GATNNNNATC 1 cut(s) 1524
BseBI CCWGG 2 cut(s) 50, 1905
BseDI CCNNGG 5 cut(s) 292, 481, 757, 1066, 1240
BseGI GGATG 7 cut(s) 155, 216, 275, 463, 544, 1468, 1900
BseJI GATNNNNATC 1 cut(s) 1524
BseLI CCNNNNNNNGG 3 cut(s) 159, 561, 2069
BseMI GCAATG 2 cut(s) 1300, 1869
BseMII CTCAG 2 cut(s) 946, 1671
BseNI ACTGG 4 cut(s) 632, 998, 1582, 1887
BseRI GAGGAG 2 cut(s) 1848, 1912
BseSI GKGCMC 1 cut(s) 1431
BseX3I CGGCCG 1 cut(s) 982
BseXI GCAGC 6 cut(s) 135, 531, 728, 961, 1382, 1964
BseYI CCCAGC 2 cut(s) 340, 1555
BsgI GTGCAG 3 cut(s) 495, 538, 968
Bsh1236I CGCG 3 cut(s) 602, 992, 1068
Bsh1285I CGRYCG 1 cut(s) 985
BshFI GGCC 6 cut(s) 53, 480, 692, 984, 1046, 1843
BshNI GGYRCC 1 cut(s) 7
BsiEI CGRYCG 1 cut(s) 985
BsiHKAI GWGCWC 3 cut(s) 216, 1314, 1431
BsiSI CCGG 5 cut(s) 11, 160, 351, 614, 985
BslFI GGGAC 1 cut(s) 358
BslI CCNNNNNNNGG 3 cut(s) 159, 561, 2069
BsmAI GTCTC 2 cut(s) 1250, 1928
BsmFI GGGAC 1 cut(s) 358
BsmI GAATGC 1 cut(s) 571
BsnI GGCC 6 cut(s) 53, 480, 692, 984, 1046, 1843
Bso31I GGTCTC 1 cut(s) 1928
Bsp119I TTCGAA 1 cut(s) 1502
Bsp1286I GDGCHC 3 cut(s) 216, 1314, 1431
Bsp1407I TGTACA 1 cut(s) 198
Bsp143I GATC 7 cut(s) 370, 541, 976, 987, 1385, 1519, 1750
Bsp68I TCGCGA 1 cut(s) 992
BspACI CCGC 8 cut(s) 592, 693, 739, 843, 1013, 1066, 1068, 1340
BspANI GGCC 6 cut(s) 53, 480, 692, 984, 1046, 1843
BspCNI CTCAG 2 cut(s) 945, 1672
BspFNI CGCG 3 cut(s) 602, 992, 1068
BspLI GGNNCC 5 cut(s) 9, 764, 1238, 1338, 1512
BspMAI CTGCAG 1 cut(s) 1384
BspPI GGATC 2 cut(s) 995, 1393
BspQI GCTCTTC 1 cut(s) 1026
BspT104I TTCGAA 1 cut(s) 1502
BspT107I GGYRCC 1 cut(s) 7
BspTI CTTAAG 1 cut(s) 1037
BspTNI GGTCTC 1 cut(s) 1928
BsrDI GCAATG 2 cut(s) 1300, 1869
BsrFI RCCGGY 1 cut(s) 350
BsrGI TGTACA 1 cut(s) 198
BsrI ACTGG 4 cut(s) 632, 998, 1582, 1887
BssAI RCCGGY 1 cut(s) 350
BssECI CCNNGG 5 cut(s) 292, 481, 757, 1066, 1240
BssMI GATC 7 cut(s) 370, 541, 976, 987, 1385, 1519, 1750
BssNI GRCGYC 1 cut(s) 405
BssT1I CCWWGG 4 cut(s) 292, 481, 757, 1240
Bst2UI CCWGG 2 cut(s) 50, 1905
Bst6I CTCTTC 3 cut(s) 1026, 1145, 1719
BstACI GRCGYC 1 cut(s) 405
BstAFI CTTAAG 1 cut(s) 1037
BstAPI GCANNNNNTGC 4 cut(s) 145, 566, 1379, 1426
BstAUI TGTACA 1 cut(s) 198
BstBAI YACGTR 1 cut(s) 772
BstBI TTCGAA 1 cut(s) 1502
BstC8I GCNNGC 4 cut(s) 478, 685, 1950, 2036
BstDEI CTNAG 3 cut(s) 932, 1252, 1680
BstDSI CCRYGG 1 cut(s) 1066
BstEII GGTNACC 3 cut(s) 37, 752, 1559
BstF5I GGATG 7 cut(s) 155, 216, 275, 463, 544, 1468, 1900
BstFNI CGCG 3 cut(s) 602, 992, 1068
BstH2I RGCGCY 1 cut(s) 1019
BstHHI GCGC 2 cut(s) 604, 1018
BstKTI GATC 7 cut(s) 373, 544, 979, 990, 1388, 1522, 1753
BstMAI GTCTC 2 cut(s) 1250, 1928
BstMBI GATC 7 cut(s) 370, 541, 976, 987, 1385, 1519, 1750
BstMCI CGRYCG 1 cut(s) 985
BstMWI GCNNNNNNNGC 9 cut(s) 145, 486, 566, 689, 1086, 1379, 1426, 1805, 1892
BstNI CCWGG 2 cut(s) 50, 1905
BstNSI RCATGY 2 cut(s) 687, 2038
BstPI GGTNACC 3 cut(s) 37, 752, 1559
BstSCI CCNGG 3 cut(s) 48, 158, 1903
BstSFI CTRYAG 3 cut(s) 120, 1380, 1615
BstSLI GKGCMC 1 cut(s) 1431
BstUI CGCG 3 cut(s) 602, 992, 1068
BstV1I GCAGC 6 cut(s) 135, 531, 728, 961, 1382, 1964
BstX2I RGATCY 2 cut(s) 370, 1385
BstXI CCANNNNNNTGG 1 cut(s) 1005
BstYI RGATCY 2 cut(s) 370, 1385
BstZI CGGCCG 1 cut(s) 982
Bsu36I CCTNAGG 1 cut(s) 1680
BsuRI GGCC 6 cut(s) 53, 480, 692, 984, 1046, 1843
BtgI CCRYGG 1 cut(s) 1066
BtsCI GGATG 7 cut(s) 155, 216, 275, 463, 544, 1468, 1900
BtsI GCAGTG 1 cut(s) 406
BtsIMutI CAGTG 4 cut(s) 214, 406, 503, 1592
BtuMI TCGCGA 1 cut(s) 992
Cac8I GCNNGC 4 cut(s) 478, 685, 1950, 2036
CaiI CAGNNNCTG 1 cut(s) 1379
CfoI GCGC 2 cut(s) 604, 1018
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 2 cut(s) 423, 1337
Cfr42I CCGCGG 1 cut(s) 1069
CseI GACGC 2 cut(s) 394, 1944
Csp6I GTAC 4 cut(s) 199, 414, 883, 1544
CspCI CAANNNNNGTGG 2 cut(s) 382, 417
CviAII CATG 5 cut(s) 684, 940, 1417, 1849, 2035
CviQI GTAC 4 cut(s) 199, 414, 883, 1544
DdeI CTNAG 3 cut(s) 932, 1252, 1680
DpnI GATC 7 cut(s) 372, 543, 978, 989, 1387, 1521, 1752
DpnII GATC 7 cut(s) 370, 541, 976, 987, 1385, 1519, 1750
DraI TTTAAA 1 cut(s) 577
EaeI YGGCCR 1 cut(s) 982
EagI CGGCCG 1 cut(s) 982
Eam1104I CTCTTC 3 cut(s) 1026, 1145, 1719
EarI CTCTTC 3 cut(s) 1026, 1145, 1719
Ecl136II GAGCTC 1 cut(s) 214
EclXI CGGCCG 1 cut(s) 982
Eco130I CCWWGG 4 cut(s) 292, 481, 757, 1240
Eco147I AGGCCT 2 cut(s) 480, 1843
Eco24I GRGCYC 1 cut(s) 216
Eco31I GGTCTC 1 cut(s) 1928
Eco32I GATATC 1 cut(s) 91
Eco47I GGWCC 2 cut(s) 423, 1337
Eco52I CGGCCG 1 cut(s) 982
Eco53kI GAGCTC 1 cut(s) 214
Eco57I CTGAAG 2 cut(s) 705, 1536
Eco81I CCTNAGG 1 cut(s) 1680
Eco91I GGTNACC 3 cut(s) 37, 752, 1559
EcoICRI GAGCTC 1 cut(s) 214
EcoO65I GGTNACC 3 cut(s) 37, 752, 1559
EcoRII CCWGG 2 cut(s) 48, 1903
EcoRV GATATC 1 cut(s) 91
EcoT14I CCWWGG 4 cut(s) 292, 481, 757, 1240
EcoT22I ATGCAT 2 cut(s) 685, 2040
EcoT38I GRGCYC 1 cut(s) 216
ErhI CCWWGG 4 cut(s) 292, 481, 757, 1240
FaeI CATG 5 cut(s) 687, 943, 1420, 1852, 2038
FalI AAGNNNNNCTT 4 cut(s) 945, 977, 1020, 1052
FaqI GGGAC 1 cut(s) 358
FatI CATG 5 cut(s) 683, 939, 1416, 1848, 2034
FokI GGATG 7 cut(s) 142, 203, 282, 470, 551, 1475, 1887
FriOI GRGCYC 1 cut(s) 216
FspBI CTAG 7 cut(s) 506, 809, 1241, 1391, 1565, 1697, 1871
GlaI GCGC 2 cut(s) 603, 1017
GsaI CCCAGC 2 cut(s) 344, 1559
GsuI CTGGAG 3 cut(s) 981, 1565, 1926
HaeII RGCGCY 1 cut(s) 1019
HaeIII GGCC 6 cut(s) 53, 480, 692, 984, 1046, 1843
HapII CCGG 5 cut(s) 11, 160, 351, 614, 985
HgaI GACGC 2 cut(s) 394, 1944
HhaI GCGC 2 cut(s) 604, 1018
Hin1I GRCGYC 1 cut(s) 405
Hin1II CATG 5 cut(s) 687, 943, 1420, 1852, 2038
Hin6I GCGC 2 cut(s) 602, 1016
HinP1I GCGC 2 cut(s) 602, 1016
HincII GTYRAC 2 cut(s) 625, 712
HindII GTYRAC 2 cut(s) 625, 712
HindIII AAGCTT 2 cut(s) 608, 1774
HinfI GANTC 6 cut(s) 191, 994, 1258, 1651, 1729, 1919
HpaI GTTAAC 1 cut(s) 625
HpaII CCGG 5 cut(s) 11, 160, 351, 614, 985
HphI GGTGA 9 cut(s) 31, 98, 137, 544, 628, 1207, 1243, 1950, 2012
Hpy166II GTNNAC 9 cut(s) 414, 437, 465, 501, 625, 712, 1279, 1429, 1536
Hpy188I TCNGA 5 cut(s) 244, 380, 935, 976, 1489
Hpy188III TCNNGA 6 cut(s) 79, 334, 991, 1514, 1748, 1754
Hpy8I GTNNAC 9 cut(s) 414, 437, 465, 501, 625, 712, 1279, 1429, 1536
Hpy99I CGWCG 3 cut(s) 179, 410, 1720
HpyAV CCTTC 8 cut(s) 565, 782, 937, 976, 1036, 1076, 1971, 1991
HpyCH4IV ACGT 3 cut(s) 771, 1715, 1974
HpyF10VI GCNNNNNNNGC 9 cut(s) 145, 486, 566, 689, 1086, 1379, 1426, 1805, 1892
HpyF3I CTNAG 3 cut(s) 932, 1252, 1680
HpySE526I ACGT 3 cut(s) 771, 1715, 1974
Hsp92I GRCGYC 1 cut(s) 405
Hsp92II CATG 5 cut(s) 687, 943, 1420, 1852, 2038
HspAI GCGC 2 cut(s) 602, 1016
KspAI GTTAAC 1 cut(s) 625
KspI CCGCGG 1 cut(s) 1069
Kzo9I GATC 7 cut(s) 370, 541, 976, 987, 1385, 1519, 1750
LguI GCTCTTC 1 cut(s) 1026
LmnI GCTCC 4 cut(s) 380, 1242, 1496, 1867
Lsp1109I GCAGC 6 cut(s) 135, 531, 728, 961, 1382, 1964
LweI GCATC 2 cut(s) 126, 1909
MaeI CTAG 7 cut(s) 506, 809, 1241, 1391, 1565, 1697, 1871
MaeII ACGT 3 cut(s) 771, 1715, 1974
MalI GATC 7 cut(s) 372, 543, 978, 989, 1387, 1521, 1752
MboI GATC 7 cut(s) 370, 541, 976, 987, 1385, 1519, 1750
MboII GAAGA 8 cut(s) 867, 961, 1043, 1162, 1336, 1375, 1529, 1736
MfeI CAATTG 1 cut(s) 394
MflI RGATCY 2 cut(s) 370, 1385
MhlI GDGCHC 3 cut(s) 216, 1314, 1431
MlyI GAGTC 4 cut(s) 988, 1252, 1660, 1913
MmeI TCCRAC 1 cut(s) 414
Mph1103I ATGCAT 2 cut(s) 685, 2040
MroXI GAANNNNTTC 1 cut(s) 884
MseI TTAA 6 cut(s) 450, 576, 624, 818, 1038, 1820
MslI CAYNNNNRTG 6 cut(s) 496, 944, 1142, 1224, 1415, 1434
MspA1I CMGCKG 3 cut(s) 741, 1068, 1531
MspCI CTTAAG 1 cut(s) 1037
MspI CCGG 5 cut(s) 11, 160, 351, 614, 985
MspR9I CCNGG 3 cut(s) 50, 160, 1905
MunI CAATTG 1 cut(s) 394
Mva1269I GAATGC 1 cut(s) 571
MvaI CCWGG 2 cut(s) 50, 1905
MvnI CGCG 3 cut(s) 602, 992, 1068
MwoI GCNNNNNNNGC 9 cut(s) 145, 486, 566, 689, 1086, 1379, 1426, 1805, 1892
NciI CCSGG 1 cut(s) 160
NdeII GATC 7 cut(s) 370, 541, 976, 987, 1385, 1519, 1750
NlaIII CATG 5 cut(s) 687, 943, 1420, 1852, 2038
NlaIV GGNNCC 5 cut(s) 9, 764, 1238, 1338, 1512
NmeAIII GCCGAG 1 cut(s) 960
NmuCI GTSAC 4 cut(s) 37, 44, 616, 1956
NruI TCGCGA 1 cut(s) 992
NsiI ATGCAT 2 cut(s) 685, 2040
NspI RCATGY 2 cut(s) 687, 2038
NspV TTCGAA 1 cut(s) 1502
PaeI GCATGC 2 cut(s) 687, 2038
PceI AGGCCT 2 cut(s) 480, 1843
PciSI GCTCTTC 1 cut(s) 1026
PctI GAATGC 1 cut(s) 571
PdmI GAANNNNTTC 1 cut(s) 884
PfeI GAWTC 2 cut(s) 191, 1729
PfoI TCCNGGA 2 cut(s) 158, 1903
PleI GAGTC 4 cut(s) 988, 1252, 1659, 1913
PpsI GAGTC 4 cut(s) 988, 1252, 1659, 1913
Ppu21I YACGTR 1 cut(s) 772
PshBI ATTAAT 1 cut(s) 818
PsiI TTATAA 2 cut(s) 824, 1646
Psp124BI GAGCTC 1 cut(s) 216
Psp6I CCWGG 2 cut(s) 48, 1903
PspEI GGTNACC 3 cut(s) 37, 752, 1559
PspFI CCCAGC 2 cut(s) 340, 1555
PspGI CCWGG 2 cut(s) 48, 1903
PspN4I GGNNCC 5 cut(s) 9, 764, 1238, 1338, 1512
PspPI GGNCC 2 cut(s) 423, 1337
PstI CTGCAG 1 cut(s) 1384
PstNI CAGNNNCTG 1 cut(s) 1379
PsuI RGATCY 2 cut(s) 370, 1385
PvuII CAGCTG 1 cut(s) 1531
RruI TCGCGA 1 cut(s) 992
RsaI GTAC 4 cut(s) 200, 415, 884, 1545
RsaNI GTAC 4 cut(s) 199, 414, 883, 1544
RseI CAYNNNNRTG 6 cut(s) 496, 944, 1142, 1224, 1415, 1434
SacI GAGCTC 1 cut(s) 216
SacII CCGCGG 1 cut(s) 1069
SapI GCTCTTC 1 cut(s) 1026
SaqAI TTAA 6 cut(s) 450, 576, 624, 818, 1038, 1820
Sau3AI GATC 7 cut(s) 370, 541, 976, 987, 1385, 1519, 1750
Sau96I GGNCC 2 cut(s) 423, 1337
ScaI AGTACT 1 cut(s) 884
SchI GAGTC 4 cut(s) 988, 1252, 1660, 1913
ScrFI CCNGG 3 cut(s) 50, 160, 1905
SduI GDGCHC 3 cut(s) 216, 1314, 1431
SfaNI GCATC 2 cut(s) 126, 1909
SfcI CTRYAG 3 cut(s) 120, 1380, 1615
Sfr303I CCGCGG 1 cut(s) 1069
SfuI TTCGAA 1 cut(s) 1502
SgrBI CCGCGG 1 cut(s) 1069
SinI GGWCC 2 cut(s) 423, 1337
SmiMI CAYNNNNRTG 6 cut(s) 496, 944, 1142, 1224, 1415, 1434
SmlI CTYRAG 2 cut(s) 71, 1037
SmoI CTYRAG 2 cut(s) 71, 1037
SphI GCATGC 2 cut(s) 687, 2038
SseBI AGGCCT 2 cut(s) 480, 1843
SsiI CCGC 8 cut(s) 592, 693, 739, 843, 1013, 1066, 1068, 1340
SspMI CTAG 7 cut(s) 506, 809, 1241, 1391, 1565, 1697, 1871
SstI GAGCTC 1 cut(s) 216
StuI AGGCCT 2 cut(s) 480, 1843
StyD4I CCNGG 3 cut(s) 48, 158, 1903
StyI CCWWGG 4 cut(s) 292, 481, 757, 1240
TaiI ACGT 3 cut(s) 774, 1718, 1977
TaqI TCGA 5 cut(s) 312, 333, 1059, 1148, 1502
TaqII GACCGA 1 cut(s) 1952
TatI WGTACW 3 cut(s) 198, 882, 1543
TauI GCSGC 4 cut(s) 594, 695, 741, 1016
TfiI GAWTC 2 cut(s) 191, 1729
Tru1I TTAA 6 cut(s) 450, 576, 624, 818, 1038, 1820
Tru9I TTAA 6 cut(s) 450, 576, 624, 818, 1038, 1820
TscAI CASTG 4 cut(s) 214, 406, 503, 1599
TseFI GTSAC 4 cut(s) 37, 44, 616, 1956
TseI GCWGC 6 cut(s) 148, 519, 741, 949, 1370, 1952
Tsp45I GTSAC 4 cut(s) 37, 44, 616, 1956
TspGWI ACGGA 2 cut(s) 1107, 1133
TspRI CASTG 4 cut(s) 214, 406, 503, 1599
Vha464I CTTAAG 1 cut(s) 1037
VneI GTGCAC 1 cut(s) 1427
VpaK11BI GGWCC 2 cut(s) 423, 1337
VspI ATTAAT 1 cut(s) 818
XapI RAATTY 2 cut(s) 29, 1468
XceI RCATGY 2 cut(s) 687, 2038
XcmI CCANNNNNNNNNTGG 1 cut(s) 1456
XmaJI CCTAGG 1 cut(s) 1240
XmnI GAANNNNTTC 1 cut(s) 884
XspI CTAG 7 cut(s) 506, 809, 1241, 1391, 1565, 1697, 1871
ZrmI AGTACT 1 cut(s) 884
Zsp2I ATGCAT 2 cut(s) 685, 2040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.