FvH4_7g31920

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000066
Physical Location & Seq
Reverse (-)
23018141 .. 23021328
3188 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g31920.t1

Sequence Viewer

Length: 2394 bp
ATGGCCTTACATGGGAGAATGCTTCTTTTGCAACTCTCTTTGGCCGCAGTGCTATTAGCAAGGACAATGCTAGCAGCTGCTCAAGCCCCGCCGCCTGACTGCAATGAGAGCTGCGGTGGTGTCTCAGTTCCTTATCCATTTGGTCTCAGTGATGGTTGTTACCTACATGTGCCGGGACAAGATTCTCAGCAGCCATTCAAGATCACTTGCAACACCACCACCTCGCAACCATCCCTACAGTTCTCGGACAGCGATAACTTCCCCACAAATATTGCCAACATTTTTGTGGAAGAGAGTGCGCTGCAAGTAATGATGGCCCCATCCTATAACTGCTACACCAACAATACATACGACTCCTCCATGGACAAAGTCATGGACCTCAATCTTCCGCCTTCTTTCACCCTCTCCGACAGAAACAAGGTTTATAACCTTGGGTGCAACAAAGTAACCAAGCTCATAGGTTATCCTCTTCAAGTTACAGACCCTGAGCAGCTCTTTGAAGTAGCGTTCAGCGGTGTAAGCTTGTGTCAAGATGAATTTGGCAAAAGATTCCCCGACACTTGCACCGGATTTGGGTGCTCCGTAAATCCTATCCCTATCGGACTGCAGAATATTACGTTGGGTGTGTGGACACTCGGTACCAGCCTCGGAACAACGGCGCAGTGGGGCCTGAGCTACCCTTGCAGTTACGGCTTCGTTGTGGATGAACGCAACTTCACATTCGCCGGGAATCAAAGTTTTGATGCACTGAGGTCCGGCGCAATAAAGAAGCTTCCGGTGCTTGCTAATTGGGCGATTGGGAATGACAACTGCGAAGCAGCAAAGAAGAAGAACGAGACTGCTTTTGCATGCAACACTGTGAATTCCAAGTGTGTCGACCGTGCTGGTGGTGGTTACTTTTGCCAGTGTGAAGATGGTTACGAAGGGAACCCATACCTCCTCGATAATTGCCTAGATATCAATGAGTGCAAGAACTCAACCCTTTGCAGTGGTCCTGCAACTTGCGTAAACTCAATTGGAAGTTACATCTGTAAATGTCACAAGGGCTATAGAAATGATGACCACGACAAGAATAAGTGTGTCCAAATCACTGAAACCTCCAGCAAAAATGACAAAGAAATGAAAATTTCCCTGGGTGTCTCTTTGAGCTTCCTAGTCATATTGATTATAACTTTTTCGATATACTGCGTACTGAAAAGAAGAAAGTTCAAGCAGCTCTGTGACAGGTACTACAAAGACAATGGGGGCTTCTTGTTACCACAAGAAATGCAGAAGTACAAAGGGTCTCAGGCACCCAGAATCTTTAAATTAGAAGAGCTTAAGAAGGCAACCAACAAGTTTGATCCCCACGAAATAATTGGAGAAGGAGGCTTTGGATTGGTTTACAAGGGAACATTGCCAGACAACAAGCAGGTGGTTGCCATAAAGAAATCAAAAACTGATGCTCCCACCATGACCCCCGAAAGTAGGATCGCCCACACTAAGCAGTTCATTAATGAGATGATTGTTCTCTCTGGAATCAAGCATAGAAATGTCGTGAGGCTTTTAGGTTGTTGTTTGGAGACCAAAACGCCTATATTAGTGTACGAGTTCGTCAGCAATGGCACACTTTATGAGCACATTCATAAACAGAAAGACAAAGGACCTCTTTCCTTTGAGCAACGAGTGAAGATAGCAGCAGAAACAGCAGGATCCCTAGCATACTTGCACTACAGCGCTTCTTCCACGCCAATTCTGCATCGAGATGTCAAGGCATCTAACATCCTACTGGATGAGAATTGCACAGCCAAAGTATCAGACTTTGGAGCTTCAAAATTGGTTCCTGAAGATGAAAATACTCAAATGGCTACTTTAGTGCAAGGGACGCTAGGGTACTTGGACCCTGAATATCTTCAGTCACACGCACTGACGGAGAAGAGTGATGTCTATAGTTTCGGGGTTGTCCTTGTGGAGCTAATAACAAGTCAAGTGGCAATTTCTAACAAGAAGCTTGAGGCAGAGAAAAACCTAGCAAACTGTTTTTTAAAGTCGGTGGCAGATAATAACTTGGATCAGATTCTTGATCATGAAATTATCAAAGAAGAAAGCTTCGAAATAGCCGAACAAGTAGCCCATCTTGCCAAAAGATGTTTAAGTTTGAAAGGAGAAGATAGGCCTACCATGGAAGAAGTAGAAACGGAGCTTAAGGTAATATTGGCAGTTATGGCAAAGCATCCAGGAGGAAAGCCTGACTCCTCCCCCAAAGAGACAGATTACTTGCTTAGAGCGTCACCTTCAAACGCTTACGTTGTTGATGTTAGAAGTGATGAAGGTGAAGTCATAACCAGCATAGATTATGACAAGAGCATGCAGAATCAAGCCCAGATGATGAAGCCTTATGATGGTGGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

798

Amino Acids

87.94

Weight (kDa)

5.78

Isoelectric Point (pI)

36.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 34 - 103 4e-09 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 319 - 360 6e-08 Calcium-binding EGF domain
Pkinase PF00069 449 - 724 4.7e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 450 - 728 8.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 426, 1169
AarI CACCTGC 1 cut(s) 1402
Acc36I ACCTGC 1 cut(s) 1402
Acc65I GGTACC 1 cut(s) 638
AccB1I GGYRCC 2 cut(s) 638, 1291
AccI GTMKAC 1 cut(s) 876
AciI CCGC 6 cut(s) 45, 89, 92, 114, 389, 513
AclWI GGATC 5 cut(s) 1337, 1478, 1686, 1699, 2058
AcoI YGGCCR 1 cut(s) 42
AcsI RAATTY 3 cut(s) 536, 862, 1125
AcuI CTGAAG 2 cut(s) 1845, 1877
AfaI GTAC 6 cut(s) 640, 1191, 1229, 1277, 1586, 1874
AfeI AGCGCT 1 cut(s) 1717
AfiI CCNNNNNNNGG 4 cut(s) 12, 573, 1467, 2381
AflII CTTAAG 2 cut(s) 1319, 2183
AflIII ACRYGT 1 cut(s) 166
AgsI TTSAA 7 cut(s) 199, 473, 500, 1210, 1812, 2140, 2277
AjnI CCWGG 2 cut(s) 1131, 2215
AjuI GAANNNNNNNTTGG 4 cut(s) 602, 634, 1356, 1388
Alw21I GWGCWC 2 cut(s) 581, 1620
Alw26I GTCTC 7 cut(s) 127, 149, 830, 1144, 1290, 1556, 2240
AlwI GGATC 5 cut(s) 1337, 1478, 1686, 1699, 2058
AlwNI CAGNNNCTG 1 cut(s) 485
Aor51HI AGCGCT 1 cut(s) 1717
AoxI GGCC 5 cut(s) 3, 42, 315, 667, 2153
ApeKI GCWGC 9 cut(s) 74, 77, 111, 190, 301, 490, 818, 1213, 1676
ApoI RAATTY 3 cut(s) 536, 862, 1125
AseI ATTAAT 1 cut(s) 1494
Asp700I GAANNNNTTC 1 cut(s) 1890
Asp718I GGTACC 1 cut(s) 638
AspLEI GCGC 4 cut(s) 301, 661, 761, 1718
AspS9I GGNCC 7 cut(s) 316, 376, 667, 753, 992, 1643, 1879
AsuC2I CCSGG 2 cut(s) 174, 727
AsuHPI GGTGA 3 cut(s) 391, 2262, 2324
AsuII TTCGAA 1 cut(s) 2091
AsuNHI GCTAGC 1 cut(s) 70
AvaII GGWCC 5 cut(s) 376, 753, 992, 1643, 1879
BamHI GGATCC 1 cut(s) 1691
BanI GGYRCC 2 cut(s) 638, 1291
Bbv12I GWGCWC 2 cut(s) 581, 1620
BbvI GCAGC 9 cut(s) 64, 86, 98, 202, 288, 502, 830, 1225, 1688
BccI CCATC 7 cut(s) 146, 238, 307, 328, 908, 2121, 2375
BceAI ACGGC 2 cut(s) 672, 706
BciT130I CCWGG 2 cut(s) 1133, 2217
BclI TGATCA 1 cut(s) 2062
BcnI CCSGG 2 cut(s) 174, 727
BcoDI GTCTC 7 cut(s) 127, 149, 830, 1144, 1290, 1556, 2240
BfaI CTAG 6 cut(s) 71, 953, 1154, 1697, 1868, 2009
BfmI CTRYAG 5 cut(s) 236, 605, 1048, 1711, 1927
BfoI RGCGCY 1 cut(s) 1719
BfrI CTTAAG 2 cut(s) 1319, 2183
BfuAI ACCTGC 1 cut(s) 1402
Bme1390I CCNGG 4 cut(s) 174, 727, 1133, 2217
Bme18I GGWCC 5 cut(s) 376, 753, 992, 1643, 1879
BmgT120I GGNCC 7 cut(s) 316, 376, 667, 753, 992, 1643, 1879
BmiI GGNNCC 8 cut(s) 318, 640, 668, 929, 1293, 1693, 1821, 1881
BmrFI CCNGG 4 cut(s) 174, 727, 1133, 2217
BmsI GCATC 5 cut(s) 733, 1432, 1747, 1763, 2221
BmtI GCTAGC 1 cut(s) 74
BpmI CTGGAG 1 cut(s) 1084
Bpu10I CCTNAGC 2 cut(s) 486, 671
Bpu14I TTCGAA 1 cut(s) 2091
BpuEI CTTGAG 2 cut(s) 66, 2012
BpuMI CCSGG 2 cut(s) 174, 727
BsaI GGTCTC 3 cut(s) 149, 1290, 1556
BsaJI CCNNGG 6 cut(s) 360, 430, 646, 1131, 1132, 2160
BsaWI WCCGGW 2 cut(s) 566, 775
BsaXI ACNNNNNCTCC 4 cut(s) 341, 371, 1429, 1459
Bsc4I CCNNNNNNNGG 4 cut(s) 12, 573, 1467, 2381
Bse1I ACTGG 2 cut(s) 904, 1773
Bse3DI GCAATG 3 cut(s) 109, 1394, 1606
BseBI CCWGG 2 cut(s) 1133, 2217
BseDI CCNNGG 6 cut(s) 360, 430, 646, 1131, 1132, 2160
BseGI GGATG 6 cut(s) 230, 320, 709, 1761, 1777, 2212
BseLI CCNNNNNNNGG 4 cut(s) 12, 573, 1467, 2381
BseMI GCAATG 3 cut(s) 109, 1394, 1606
BseMII CTCAG 7 cut(s) 138, 160, 200, 477, 662, 740, 1301
BseNI ACTGG 2 cut(s) 904, 1773
BseRI GAGGAG 3 cut(s) 346, 929, 2224
BseXI GCAGC 9 cut(s) 64, 86, 98, 202, 288, 502, 830, 1225, 1688
Bsh1285I CGRYCG 1 cut(s) 880
BshFI GGCC 5 cut(s) 5, 44, 317, 669, 2155
BshNI GGYRCC 2 cut(s) 638, 1291
BsiEI CGRYCG 1 cut(s) 880
BsiHKAI GWGCWC 2 cut(s) 581, 1620
BsiSI CCGG 5 cut(s) 173, 567, 726, 756, 776
BslFI GGGAC 2 cut(s) 189, 1876
BslI CCNNNNNNNGG 4 cut(s) 12, 573, 1467, 2381
BsmAI GTCTC 7 cut(s) 127, 149, 830, 1144, 1290, 1556, 2240
BsmFI GGGAC 2 cut(s) 189, 1876
BsmI GAATGC 1 cut(s) 24
BsnI GGCC 5 cut(s) 5, 44, 317, 669, 2155
Bso31I GGTCTC 3 cut(s) 149, 1290, 1556
Bsp119I TTCGAA 1 cut(s) 2091
Bsp1286I GDGCHC 2 cut(s) 581, 1620
Bsp143I GATC 6 cut(s) 201, 1342, 1470, 1691, 2050, 2062
Bsp19I CCATGG 2 cut(s) 360, 2160
BspACI CCGC 6 cut(s) 45, 89, 92, 114, 389, 513
BspANI GGCC 5 cut(s) 5, 44, 317, 669, 2155
BspCNI CTCAG 7 cut(s) 137, 159, 199, 478, 663, 741, 1300
BspHI TCATGA 1 cut(s) 2065
BspLI GGNNCC 8 cut(s) 318, 640, 668, 929, 1293, 1693, 1821, 1881
BspMAI CTGCAG 1 cut(s) 609
BspMI ACCTGC 1 cut(s) 1402
BspOI GCTAGC 1 cut(s) 74
BspPI GGATC 5 cut(s) 1337, 1478, 1686, 1699, 2058
BspQI GCTCTTC 1 cut(s) 1308
BspT104I TTCGAA 1 cut(s) 2091
BspT107I GGYRCC 2 cut(s) 638, 1291
BspTI CTTAAG 2 cut(s) 1319, 2183
BspTNI GGTCTC 3 cut(s) 149, 1290, 1556
BsrDI GCAATG 3 cut(s) 109, 1394, 1606
BsrI ACTGG 2 cut(s) 904, 1773
BssECI CCNNGG 6 cut(s) 360, 430, 646, 1131, 1132, 2160
BssMI GATC 6 cut(s) 201, 1342, 1470, 1691, 2050, 2062
BssT1I CCWWGG 3 cut(s) 360, 430, 2160
Bst2UI CCWGG 2 cut(s) 1133, 2217
Bst4CI ACNGT 4 cut(s) 240, 859, 881, 2018
Bst6I CTCTTC 4 cut(s) 285, 474, 1308, 1910
BstAFI CTTAAG 2 cut(s) 1319, 2183
BstBI TTCGAA 1 cut(s) 2091
BstC8I GCNNGC 4 cut(s) 72, 783, 850, 2348
BstDEI CTNAG 9 cut(s) 124, 146, 186, 486, 671, 749, 1287, 1482, 2261
BstDSI CCRYGG 2 cut(s) 360, 2160
BstF5I GGATG 6 cut(s) 230, 320, 709, 1761, 1777, 2212
BstH2I RGCGCY 1 cut(s) 1719
BstHHI GCGC 4 cut(s) 301, 661, 761, 1718
BstKTI GATC 6 cut(s) 204, 1345, 1473, 1694, 2053, 2065
BstMAI GTCTC 7 cut(s) 127, 149, 830, 1144, 1290, 1556, 2240
BstMBI GATC 6 cut(s) 201, 1342, 1470, 1691, 2050, 2062
BstMCI CGRYCG 1 cut(s) 880
BstNI CCWGG 2 cut(s) 1133, 2217
BstNSI RCATGY 3 cut(s) 170, 852, 2350
BstSCI CCNGG 4 cut(s) 172, 725, 1131, 2215
BstSFI CTRYAG 5 cut(s) 236, 605, 1048, 1711, 1927
BstV1I GCAGC 9 cut(s) 64, 86, 98, 202, 288, 502, 830, 1225, 1688
BstX2I RGATCY 1 cut(s) 1691
BstYI RGATCY 1 cut(s) 1691
BsuRI GGCC 5 cut(s) 5, 44, 317, 669, 2155
BtgI CCRYGG 2 cut(s) 360, 2160
BtsCI GGATG 6 cut(s) 230, 320, 709, 1761, 1777, 2212
BtsI GCAGTG 3 cut(s) 54, 668, 994
BtsIMutI CAGTG 9 cut(s) 54, 154, 668, 746, 855, 911, 994, 1089, 1904
BveI ACCTGC 1 cut(s) 1402
Cac8I GCNNGC 4 cut(s) 72, 783, 850, 2348
CaiI CAGNNNCTG 1 cut(s) 485
CciI TCATGA 1 cut(s) 2065
CfoI GCGC 4 cut(s) 301, 661, 761, 1718
Cfr13I GGNCC 7 cut(s) 316, 376, 667, 753, 992, 1643, 1879
CseI GACGC 2 cut(s) 1873, 2256
Csp6I GTAC 6 cut(s) 639, 1190, 1228, 1276, 1585, 1873
CspCI CAANNNNNGTGG 4 cut(s) 253, 288, 1950, 1985
CviAII CATG 9 cut(s) 11, 167, 361, 373, 849, 1453, 2066, 2161, 2347
CviQI GTAC 6 cut(s) 639, 1190, 1228, 1276, 1585, 1873
DdeI CTNAG 9 cut(s) 124, 146, 186, 486, 671, 749, 1287, 1482, 2261
DpnI GATC 6 cut(s) 203, 1344, 1472, 1693, 2052, 2064
DpnII GATC 6 cut(s) 201, 1342, 1470, 1691, 2050, 2062
DraI TTTAAA 2 cut(s) 1306, 2025
EaeI YGGCCR 1 cut(s) 42
Eam1104I CTCTTC 4 cut(s) 285, 474, 1308, 1910
EarI CTCTTC 4 cut(s) 285, 474, 1308, 1910
EciI GGCGGA 1 cut(s) 378
Eco130I CCWWGG 3 cut(s) 360, 430, 2160
Eco147I AGGCCT 1 cut(s) 2155
Eco31I GGTCTC 3 cut(s) 149, 1290, 1556
Eco32I GATATC 1 cut(s) 958
Eco47I GGWCC 5 cut(s) 376, 753, 992, 1643, 1879
Eco47III AGCGCT 1 cut(s) 1717
Eco57I CTGAAG 2 cut(s) 1845, 1877
EcoO109I RGGNCCY 2 cut(s) 667, 1643
EcoRI GAATTC 1 cut(s) 862
EcoRII CCWGG 2 cut(s) 1131, 2215
EcoRV GATATC 1 cut(s) 958
EcoT14I CCWWGG 3 cut(s) 360, 430, 2160
ErhI CCWWGG 3 cut(s) 360, 430, 2160
FaeI CATG 9 cut(s) 14, 170, 364, 376, 852, 1456, 2069, 2164, 2350
FalI AAGNNNNNCTT 2 cut(s) 1632, 1664
FaqI GGGAC 2 cut(s) 189, 1876
FatI CATG 9 cut(s) 10, 166, 360, 372, 848, 1452, 2065, 2160, 2346
FauI CCCGC 1 cut(s) 96
FbaI TGATCA 1 cut(s) 2062
FblI GTMKAC 1 cut(s) 876
FokI GGATG 6 cut(s) 217, 307, 716, 1748, 1784, 2199
FspBI CTAG 6 cut(s) 71, 953, 1154, 1697, 1868, 2009
GlaI GCGC 4 cut(s) 300, 660, 760, 1717
GsuI CTGGAG 1 cut(s) 1084
HaeII RGCGCY 1 cut(s) 1719
HaeIII GGCC 5 cut(s) 5, 44, 317, 669, 2155
HapII CCGG 5 cut(s) 173, 567, 726, 756, 776
HgaI GACGC 2 cut(s) 1873, 2256
HhaI GCGC 4 cut(s) 301, 661, 761, 1718
Hin1II CATG 9 cut(s) 14, 170, 364, 376, 852, 1456, 2069, 2164, 2350
Hin6I GCGC 4 cut(s) 299, 659, 759, 1716
HinP1I GCGC 4 cut(s) 299, 659, 759, 1716
HincII GTYRAC 1 cut(s) 877
HindII GTYRAC 1 cut(s) 877
HindIII AAGCTT 4 cut(s) 520, 770, 1988, 2086
HinfI GANTC 9 cut(s) 182, 353, 549, 730, 1299, 1518, 2056, 2231, 2353
HpaII CCGG 5 cut(s) 173, 567, 726, 756, 776
HphI GGTGA 3 cut(s) 391, 2262, 2324
Hpy166II GTNNAC 5 cut(s) 630, 877, 1009, 1384, 1585
Hpy188I TCNGA 6 cut(s) 247, 409, 602, 650, 1798, 2055
Hpy188III TCNNGA 8 cut(s) 199, 530, 1515, 1537, 1742, 1823, 2060, 2066
Hpy8I GTNNAC 5 cut(s) 630, 877, 1009, 1384, 1585
HpyAV CCTTC 6 cut(s) 402, 917, 1318, 1358, 2283, 2303
HpyCH4III ACNGT 4 cut(s) 240, 859, 881, 2018
HpyCH4IV ACGT 2 cut(s) 617, 2286
HpyF3I CTNAG 9 cut(s) 124, 146, 186, 486, 671, 749, 1287, 1482, 2261
HpySE526I ACGT 2 cut(s) 617, 2286
Hsp92II CATG 9 cut(s) 14, 170, 364, 376, 852, 1456, 2069, 2164, 2350
HspAI GCGC 4 cut(s) 299, 659, 759, 1716
KpnI GGTACC 1 cut(s) 642
Ksp22I TGATCA 1 cut(s) 2062
Kzo9I GATC 6 cut(s) 201, 1342, 1470, 1691, 2050, 2062
LguI GCTCTTC 1 cut(s) 1308
LmnI GCTCC 5 cut(s) 584, 1450, 1805, 1951, 2179
Lsp1109I GCAGC 9 cut(s) 64, 86, 98, 202, 288, 502, 830, 1225, 1688
LweI GCATC 5 cut(s) 733, 1432, 1747, 1763, 2221
MaeI CTAG 6 cut(s) 71, 953, 1154, 1697, 1868, 2009
MaeII ACGT 2 cut(s) 617, 2286
MalI GATC 6 cut(s) 203, 1344, 1472, 1693, 2052, 2064
MboI GATC 6 cut(s) 201, 1342, 1470, 1691, 2050, 2062
MfeI CAATTG 1 cut(s) 1014
MflI RGATCY 1 cut(s) 1691
MhlI GDGCHC 2 cut(s) 581, 1620
MlyI GAGTC 2 cut(s) 347, 2225
MmeI TCCRAC 1 cut(s) 432
MroXI GAANNNNTTC 1 cut(s) 1890
MseI TTAA 6 cut(s) 1305, 1320, 1494, 2024, 2132, 2184
MslI CAYNNNNRTG 3 cut(s) 284, 1530, 1743
MspA1I CMGCKG 2 cut(s) 77, 513
MspCI CTTAAG 2 cut(s) 1319, 2183
MspI CCGG 5 cut(s) 173, 567, 726, 756, 776
MspR9I CCNGG 4 cut(s) 174, 727, 1133, 2217
MunI CAATTG 1 cut(s) 1014
Mva1269I GAATGC 1 cut(s) 24
MvaI CCWGG 2 cut(s) 1133, 2217
NciI CCSGG 2 cut(s) 174, 727
NcoI CCATGG 2 cut(s) 360, 2160
NdeII GATC 6 cut(s) 201, 1342, 1470, 1691, 2050, 2062
NheI GCTAGC 1 cut(s) 70
NlaIII CATG 9 cut(s) 14, 170, 364, 376, 852, 1456, 2069, 2164, 2350
NlaIV GGNNCC 8 cut(s) 318, 640, 668, 929, 1293, 1693, 1821, 1881
NmuCI GTSAC 4 cut(s) 1037, 1220, 1896, 2268
NspI RCATGY 3 cut(s) 170, 852, 2350
NspV TTCGAA 1 cut(s) 2091
PaeI GCATGC 2 cut(s) 852, 2350
PagI TCATGA 1 cut(s) 2065
PaqCI CACCTGC 1 cut(s) 1402
PasI CCCWGGG 1 cut(s) 1132
PceI AGGCCT 1 cut(s) 2155
PciI ACATGT 1 cut(s) 166
PciSI GCTCTTC 1 cut(s) 1308
PcsI WCGNNNNNNNCGW 1 cut(s) 2097
PctI GAATGC 1 cut(s) 24
PdmI GAANNNNTTC 1 cut(s) 1890
PfeI GAWTC 7 cut(s) 182, 549, 730, 1299, 1518, 2056, 2353
PflFI GACNNNGTC 1 cut(s) 368
PfoI TCCNGGA 1 cut(s) 2215
PleI GAGTC 2 cut(s) 347, 2225
PpsI GAGTC 2 cut(s) 347, 2225
PpuMI RGGWCCY 1 cut(s) 1643
PscI ACATGT 1 cut(s) 166
PshBI ATTAAT 1 cut(s) 1494
PsiI TTATAA 2 cut(s) 426, 1169
Psp5II RGGWCCY 1 cut(s) 1643
Psp6I CCWGG 2 cut(s) 1131, 2215
PspGI CCWGG 2 cut(s) 1131, 2215
PspN4I GGNNCC 8 cut(s) 318, 640, 668, 929, 1293, 1693, 1821, 1881
PspPI GGNCC 7 cut(s) 316, 376, 667, 753, 992, 1643, 1879
PspPPI RGGWCCY 1 cut(s) 1643
PstI CTGCAG 1 cut(s) 609
PstNI CAGNNNCTG 1 cut(s) 485
PsuI RGATCY 1 cut(s) 1691
PsyI GACNNNGTC 1 cut(s) 368
PvuII CAGCTG 1 cut(s) 77
RsaI GTAC 6 cut(s) 640, 1191, 1229, 1277, 1586, 1874
RsaNI GTAC 6 cut(s) 639, 1190, 1228, 1276, 1585, 1873
RseI CAYNNNNRTG 3 cut(s) 284, 1530, 1743
SalI GTCGAC 1 cut(s) 875
SapI GCTCTTC 1 cut(s) 1308
SaqAI TTAA 6 cut(s) 1305, 1320, 1494, 2024, 2132, 2184
Sau3AI GATC 6 cut(s) 201, 1342, 1470, 1691, 2050, 2062
Sau96I GGNCC 7 cut(s) 316, 376, 667, 753, 992, 1643, 1879
SchI GAGTC 2 cut(s) 347, 2225
ScrFI CCNGG 4 cut(s) 174, 727, 1133, 2217
SduI GDGCHC 2 cut(s) 581, 1620
SfaNI GCATC 5 cut(s) 733, 1432, 1747, 1763, 2221
SfcI CTRYAG 5 cut(s) 236, 605, 1048, 1711, 1927
SfuI TTCGAA 1 cut(s) 2091
SinI GGWCC 5 cut(s) 376, 753, 992, 1643, 1879
SmiMI CAYNNNNRTG 3 cut(s) 284, 1530, 1743
SmlI CTYRAG 4 cut(s) 81, 1319, 1991, 2183
SmoI CTYRAG 4 cut(s) 81, 1319, 1991, 2183
SphI GCATGC 2 cut(s) 852, 2350
SseBI AGGCCT 1 cut(s) 2155
SsiI CCGC 6 cut(s) 45, 89, 92, 114, 389, 513
SspI AATATT 3 cut(s) 271, 613, 2193
SspMI CTAG 6 cut(s) 71, 953, 1154, 1697, 1868, 2009
StuI AGGCCT 1 cut(s) 2155
StyD4I CCNGG 4 cut(s) 172, 725, 1131, 2215
StyI CCWWGG 3 cut(s) 360, 430, 2160
TaaI ACNGT 4 cut(s) 240, 859, 881, 2018
TaiI ACGT 2 cut(s) 620, 2289
TaqI TCGA 5 cut(s) 876, 942, 1178, 1741, 2091
TatI WGTACW 1 cut(s) 1275
TauI GCSGC 2 cut(s) 47, 94
TfiI GAWTC 7 cut(s) 182, 549, 730, 1299, 1518, 2056, 2353
Tru1I TTAA 6 cut(s) 1305, 1320, 1494, 2024, 2132, 2184
Tru9I TTAA 6 cut(s) 1305, 1320, 1494, 2024, 2132, 2184
TscAI CASTG 9 cut(s) 54, 154, 668, 753, 862, 911, 994, 1096, 1911
TseFI GTSAC 4 cut(s) 1037, 1220, 1896, 2268
TseI GCWGC 9 cut(s) 74, 77, 111, 190, 301, 490, 818, 1213, 1676
Tsp45I GTSAC 4 cut(s) 1037, 1220, 1896, 2268
TspDTI ATGAA 9 cut(s) 549, 720, 1136, 1480, 1613, 1845, 2082, 2322, 2384
TspGWI ACGGA 3 cut(s) 571, 1925, 2192
TspRI CASTG 9 cut(s) 54, 154, 668, 753, 862, 911, 994, 1096, 1911
Tth111I GACNNNGTC 1 cut(s) 368
Vha464I CTTAAG 2 cut(s) 1319, 2183
VpaK11BI GGWCC 5 cut(s) 376, 753, 992, 1643, 1879
VspI ATTAAT 1 cut(s) 1494
XapI RAATTY 3 cut(s) 536, 862, 1125
XceI RCATGY 3 cut(s) 170, 852, 2350
XcmI CCANNNNNNNNNTGG 3 cut(s) 283, 911, 1355
XmiI GTMKAC 1 cut(s) 876
XmnI GAANNNNTTC 1 cut(s) 1890
XspI CTAG 6 cut(s) 71, 953, 1154, 1697, 1868, 2009
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.