Rmu_sc0005418.1_g000012

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005418.1
OG0000066
Physical Location & Seq
Reverse (-)
22480 .. 26209
3730 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005418.1_g000012.1.cds

Sequence Viewer

Length: 2337 bp
atggcctcattacatgagaggattcttgttacgctgctctctttgttaatgttagtggccgcaacaacaacattgctagcagcggcgcagaccctagtgccgtctcctcaagccaagccaggatgccgagagaagtgcggtggtctcacaatcccatacccgtttggcctaggcgaagcttgttccatgcgacccgagttcaccatcacttgcgatgaatccaccacagcacccccatcagcaaactttacaaacagtacattcacctttcccatcaccattactaacttttcgcttgttgacggtgagttacaagtaatgcaggagatagccagaaattgctatgacgatgagggttataatacaaacagcagcagttcactcgagctgcctccttcttacaccatctcaaccaaaaacaacttctttacccttggctgcaacgttttagcagtctatctgcaaggtgtggatgtgggctaccaaaccggagtaaatgtggccttatgtatggatattcttggcgaggaattgaccgagtcttgcatcggcgttgggtgcgcccaaacttccatccctagtggactgcaaaacatttcaattgtagtgggttcacttaacgacggttataacgcgagtgatccctgggtatcaaactacaagtgcagctacgctttcatcgttgaagaaggcaacttcacattcgcaccgaaaacaagttttcaacaactgaatacaacaattcaacagcttccggtggctgttaattgggcaatcggggacgagccatgtgcagtagcgaagaacctaactgattattcgtgcaaagagaatacaatttgtgtcgaccggagtaccatcagtaatgagacggctgcaggttacatttgccggtgcttgccaggctacgaagggaacccgtacctcggttgtcgagatatcgatgagtgcacgacctcatcaagggacccctgcacgaatggaaagtgcgtaaattcacctccagggaattactcgtgtaaatgtaataaaggattcagaaaccaagacgacatgacttgcatcccatattcctggtcaaacaacacttccctaaaaatatcattaggtgtcagtataggcttcttggttttagtggtcgtaatttcgtggatgtattgggaaatgaacaaaaggaggctcatcaaacttaaaaagaagtacttcaaagaaaacggtggcttaacattacaacaacaactcgctagtcatggaggagccgtggaaacaacaagaatctttacagcggaagaacttaagaaggcgacaaacaattaccatgcagatgagattcttggtgaaggagcctatggaacagtttataaaggcattctacctgataagaaagttgttgccataaaaaaatcaaaaattggcgccccaactcaaagtgagcagttcgttaatgaggttatcgttctctctcaaatcaaccacagaaatgtggtaaaactattgggttgttgttttgagactgaagtgcctttactagtttatgagtacattacccatggcactctttttgagcatatattcaataagggaaaaggatcaccgctttcatgggaattacgattgaagatagcattagaaacggcaggggcactagcttacttacactcctctacttccacaccaatcatacatcgagacgtgaaagcaacaaatatactattagatgccaattacacggccaaagtgtccgattttggagcttcgcgtttcattcctctagatcaaactgagctagcaacactagtgcaagggacgcttggctacttggaccctgaatactttcattccaatcaactgactgaaaagagtgacgtctacagctttggagttgtcctagcagagctattaacgagcagagtggcactttctttcgctagacctgacgcagagagatgtctagcaagtttctttgtttcttcaatagagaaagattgcttgattgaaattcttgacgctgacatagtgaatgaggggaacatagacacagcagagcaagttgcttatctcgcaaaaagatgtctaaggataaaaggggaggaaaggccttcaatgaaagaagtggccatggagttggagggaatgcaaaatacagcgaagcatccatggggaaaaaatgcaaattcatgtcccgaggagactgagtacttgctggggtcacctatcaattcagaagcttacattgtgaatgttagaggtgatggtgatgaaggttctagtggtacaactagtgggtatgacagcatgcaaattcaaatgttaatgccatatgatgatgcgcgatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK hEGF

Protein Analysis

778

Amino Acids

85.2

Weight (kDa)

4.97

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 360, 630, 1362
AatII GACGTC 1 cut(s) 1869
Acc36I ACCTGC 1 cut(s) 869
AccB1I GGYRCC 1 cut(s) 1415
AccI GTMKAC 2 cut(s) 846, 1869
AccII CGCG 3 cut(s) 635, 1759, 2332
AciI CCGC 5 cut(s) 60, 83, 138, 1286, 1595
AclI AACGTT 1 cut(s) 444
AclWI GGATC 2 cut(s) 635, 1597
AcoI YGGCCR 3 cut(s) 57, 1731, 2115
AcsI RAATTY 4 cut(s) 994, 1998, 2173, 2301
AcuI CTGAAG 1 cut(s) 1536
AcyI GRCGYC 2 cut(s) 1416, 1866
AfaI GTAC 7 cut(s) 259, 856, 923, 1202, 1541, 2198, 2275
AfiI CCNNNNNNNGG 2 cut(s) 926, 963
AflII CTTAAG 1 cut(s) 1295
AhlI ACTAGT 3 cut(s) 1528, 1795, 2279
AjiI CACGTC 1 cut(s) 1693
AjnI CCWGG 5 cut(s) 118, 644, 901, 1003, 1073
AjuI GAANNNNNNNTTGG 2 cut(s) 407, 439
Alw21I GWGCWC 1 cut(s) 953
Alw26I GTCTC 6 cut(s) 108, 149, 863, 1505, 1683, 2183
Alw44I GTGCAC 1 cut(s) 949
AlwI GGATC 2 cut(s) 635, 1597
Ama87I CYCGRG 3 cut(s) 194, 383, 2183
AoxI GGCC 7 cut(s) 3, 57, 166, 501, 1731, 2096, 2115
ApaLI GTGCAC 1 cut(s) 949
ApeKI GCWGC 7 cut(s) 34, 80, 372, 388, 438, 666, 875
ApoI RAATTY 4 cut(s) 994, 1998, 2173, 2301
Asp700I GAANNNNTTC 2 cut(s) 1202, 1833
AspA2I CCTAGG 1 cut(s) 169
AspLEI GCGC 4 cut(s) 88, 563, 1418, 2332
AspS9I GGNCC 2 cut(s) 967, 1822
AsuNHI GCTAGC 2 cut(s) 76, 1786
AvaI CYCGRG 3 cut(s) 194, 383, 2183
AvaII GGWCC 2 cut(s) 967, 1822
AvrII CCTAGG 1 cut(s) 169
BaeGI GKGCMC 2 cut(s) 953, 1645
BaeI ACNNNNGTAYC 2 cut(s) 838, 871
BalI TGGCCA 1 cut(s) 2117
BanI GGYRCC 1 cut(s) 1415
BarI GAAGNNNNNNTAC 2 cut(s) 1509, 1541
BauI CACGAG 1 cut(s) 1015
Bbv12I GWGCWC 1 cut(s) 953
BbvI GCAGC 7 cut(s) 21, 92, 375, 384, 425, 678, 862
BccI CCATC 7 cut(s) 212, 244, 281, 413, 581, 866, 2246
BceAI ACGGC 5 cut(s) 85, 888, 1244, 1650, 1746
BcgI CGANNNNNNTGC 6 cut(s) 117, 151, 364, 398, 773, 807
BciT130I CCWGG 5 cut(s) 120, 646, 903, 1005, 1075
BcoDI GTCTC 6 cut(s) 108, 149, 863, 1505, 1683, 2183
BcuI ACTAGT 3 cut(s) 1528, 1795, 2279
BfmI CTRYAG 2 cut(s) 876, 1870
BfoI RGCGCY 1 cut(s) 1419
BfrI CTTAAG 1 cut(s) 1295
BfuAI ACCTGC 1 cut(s) 869
BisI GCNGC 9 cut(s) 35, 60, 81, 84, 373, 389, 439, 667, 876
BlnI CCTAGG 1 cut(s) 169
BlsI GCNGC 9 cut(s) 36, 61, 82, 85, 374, 390, 440, 668, 877
BmcAI AGTACT 2 cut(s) 1202, 2198
Bme1390I CCNGG 5 cut(s) 120, 646, 903, 1005, 1075
Bme18I GGWCC 2 cut(s) 967, 1822
BmeT110I CYCGRG 3 cut(s) 194, 383, 2183
BmgBI CACGTC 1 cut(s) 1693
BmgT120I GGNCC 2 cut(s) 967, 1822
BmiI GGNNCC 7 cut(s) 917, 968, 969, 1258, 1345, 1417, 1824
BmrFI CCNGG 5 cut(s) 120, 646, 903, 1005, 1075
BmsI GCATC 6 cut(s) 113, 555, 1071, 1708, 2161, 2317
BmtI GCTAGC 2 cut(s) 80, 1790
BpmI CTGGAG 1 cut(s) 987
BpuEI CTTGAG 1 cut(s) 93
Bsa29I ATCGAT 1 cut(s) 942
BsaHI GRCGYC 2 cut(s) 1416, 1866
BsaI GGTCTC 1 cut(s) 149
BsaWI WCCGGW 3 cut(s) 488, 754, 849
BsaXI ACNNNNNCTCC 8 cut(s) 483, 513, 1245, 1275, 1643, 1673, 2180, 2210
Bsc4I CCNNNNNNNGG 2 cut(s) 926, 963
Bse118I RCCGGY 1 cut(s) 891
Bse3DI GCAATG 1 cut(s) 71
BseBI CCWGG 5 cut(s) 120, 646, 903, 1005, 1075
BseCI ATCGAT 1 cut(s) 942
BseGI GGATG 6 cut(s) 128, 478, 573, 1062, 1158, 2152
BseLI CCNNNNNNNGG 2 cut(s) 926, 963
BseMI GCAATG 1 cut(s) 71
BseMII CTCAG 2 cut(s) 1773, 2184
BseRI GAGGAG 4 cut(s) 96, 1269, 1651, 2201
BseSI GKGCMC 2 cut(s) 953, 1645
BseXI GCAGC 7 cut(s) 21, 92, 375, 384, 425, 678, 862
BseYI CCCAGC 1 cut(s) 2203
BsgI GTGCAG 3 cut(s) 685, 813, 958
Bsh1236I CGCG 3 cut(s) 635, 1759, 2332
Bsh1285I CGRYCG 1 cut(s) 850
BshFI GGCC 7 cut(s) 5, 59, 168, 503, 1733, 2098, 2117
BshNI GGYRCC 1 cut(s) 1415
BshVI ATCGAT 1 cut(s) 942
BsiEI CGRYCG 1 cut(s) 850
BsiHKAI GWGCWC 1 cut(s) 953
BsiHKCI CYCGRG 3 cut(s) 194, 383, 2183
BsiSI CCGG 4 cut(s) 489, 755, 850, 892
BslFI GGGAC 4 cut(s) 794, 980, 1819, 2166
BslI CCNNNNNNNGG 2 cut(s) 926, 963
BsmAI GTCTC 6 cut(s) 108, 149, 863, 1505, 1683, 2183
BsmBI CGTCTC 3 cut(s) 108, 863, 1683
BsmFI GGGAC 4 cut(s) 794, 980, 1819, 2166
BsmI GAATGC 2 cut(s) 1368, 2139
BsnI GGCC 7 cut(s) 5, 59, 168, 503, 1733, 2098, 2117
Bso31I GGTCTC 1 cut(s) 149
BsoBI CYCGRG 3 cut(s) 194, 383, 2183
Bsp1286I GDGCHC 2 cut(s) 953, 1645
Bsp143I GATC 3 cut(s) 640, 1589, 1774
Bsp19I CCATGG 3 cut(s) 1549, 2118, 2156
BspACI CCGC 5 cut(s) 60, 83, 138, 1286, 1595
BspANI GGCC 7 cut(s) 5, 59, 168, 503, 1733, 2098, 2117
BspCNI CTCAG 2 cut(s) 1774, 2185
BspDI ATCGAT 1 cut(s) 942
BspFNI CGCG 3 cut(s) 635, 1759, 2332
BspLI GGNNCC 7 cut(s) 917, 968, 969, 1258, 1345, 1417, 1824
BspMAI CTGCAG 1 cut(s) 880
BspMI ACCTGC 1 cut(s) 869
BspOI GCTAGC 2 cut(s) 80, 1790
BspPI GGATC 2 cut(s) 635, 1597
BspT107I GGYRCC 1 cut(s) 1415
BspTI CTTAAG 1 cut(s) 1295
BspTNI GGTCTC 1 cut(s) 149
BsrDI GCAATG 1 cut(s) 71
BsrFI RCCGGY 1 cut(s) 891
BssAI RCCGGY 1 cut(s) 891
BssMI GATC 3 cut(s) 640, 1589, 1774
BssNI GRCGYC 2 cut(s) 1416, 1866
BssSI CACGAG 1 cut(s) 1015
BssT1I CCWWGG 5 cut(s) 169, 433, 1549, 2118, 2156
Bst2BI CACGAG 1 cut(s) 1015
Bst2UI CCWGG 5 cut(s) 120, 646, 903, 1005, 1075
Bst4CI ACNGT 5 cut(s) 257, 305, 626, 1217, 1357
BstACI GRCGYC 2 cut(s) 1416, 1866
BstAFI CTTAAG 1 cut(s) 1295
BstC8I GCNNGC 4 cut(s) 78, 899, 1788, 2297
BstDEI CTNAG 3 cut(s) 1782, 2075, 2193
BstDSI CCRYGG 4 cut(s) 1260, 1549, 2118, 2156
BstEII GGTNACC 1 cut(s) 2208
BstENI CCTNNNNNAGG 1 cut(s) 961
BstF5I GGATG 6 cut(s) 128, 478, 573, 1062, 1158, 2152
BstFNI CGCG 3 cut(s) 635, 1759, 2332
BstH2I RGCGCY 1 cut(s) 1419
BstHHI GCGC 4 cut(s) 88, 563, 1418, 2332
BstKTI GATC 3 cut(s) 643, 1592, 1777
BstMAI GTCTC 6 cut(s) 108, 149, 863, 1505, 1683, 2183
BstMBI GATC 3 cut(s) 640, 1589, 1774
BstMCI CGRYCG 1 cut(s) 850
BstMWI GCNNNNNNNGC 4 cut(s) 558, 903, 1807, 2060
BstNI CCWGG 5 cut(s) 120, 646, 903, 1005, 1075
BstNSI RCATGY 1 cut(s) 2299
BstPI GGTNACC 1 cut(s) 2208
BstSCI CCNGG 5 cut(s) 118, 644, 901, 1003, 1073
BstSFI CTRYAG 2 cut(s) 876, 1870
BstSLI GKGCMC 2 cut(s) 953, 1645
BstUI CGCG 3 cut(s) 635, 1759, 2332
BstV1I GCAGC 7 cut(s) 21, 92, 375, 384, 425, 678, 862
BstXI CCANNNNNNTGG 2 cut(s) 1074, 2125
Bsu15I ATCGAT 1 cut(s) 942
BsuRI GGCC 7 cut(s) 5, 59, 168, 503, 1733, 2098, 2117
BsuTUI ATCGAT 1 cut(s) 942
BtgI CCRYGG 4 cut(s) 1260, 1549, 2118, 2156
BtgZI GCGATG 1 cut(s) 228
BtrI CACGTC 1 cut(s) 1693
BtsCI GGATG 6 cut(s) 128, 478, 573, 1062, 1158, 2152
BveI ACCTGC 1 cut(s) 869
Cac8I GCNNGC 4 cut(s) 78, 899, 1788, 2297
CfoI GCGC 4 cut(s) 88, 563, 1418, 2332
Cfr10I RCCGGY 1 cut(s) 891
Cfr13I GGNCC 2 cut(s) 967, 1822
ClaI ATCGAT 1 cut(s) 942
CseI GACGC 3 cut(s) 1816, 1946, 2015
Csp6I GTAC 7 cut(s) 258, 855, 922, 1201, 1540, 2197, 2274
CspCI CAANNNNNGTGG 2 cut(s) 588, 623
CviQI GTAC 7 cut(s) 258, 855, 922, 1201, 1540, 2197, 2274
DdeI CTNAG 3 cut(s) 1782, 2075, 2193
DinI GGCGCC 1 cut(s) 1417
DpnI GATC 3 cut(s) 642, 1591, 1776
DpnII GATC 3 cut(s) 640, 1589, 1774
EaeI YGGCCR 3 cut(s) 57, 1731, 2115
Eco130I CCWWGG 5 cut(s) 169, 433, 1549, 2118, 2156
Eco147I AGGCCT 1 cut(s) 2098
Eco31I GGTCTC 1 cut(s) 149
Eco32I GATATC 1 cut(s) 940
Eco47I GGWCC 2 cut(s) 967, 1822
Eco57I CTGAAG 1 cut(s) 1536
Eco88I CYCGRG 3 cut(s) 194, 383, 2183
Eco91I GGTNACC 1 cut(s) 2208
EcoNI CCTNNNNNAGG 1 cut(s) 961
EcoO109I RGGNCCY 1 cut(s) 967
EcoO65I GGTNACC 1 cut(s) 2208
EcoRII CCWGG 5 cut(s) 118, 644, 901, 1003, 1073
EcoRV GATATC 1 cut(s) 940
EcoT14I CCWWGG 5 cut(s) 169, 433, 1549, 2118, 2156
EgeI GGCGCC 1 cut(s) 1417
EheI GGCGCC 1 cut(s) 1417
ErhI CCWWGG 5 cut(s) 169, 433, 1549, 2118, 2156
Esp3I CGTCTC 3 cut(s) 108, 863, 1683
FalI AAGNNNNNCTT 4 cut(s) 1187, 1219, 1794, 1826
FaqI GGGAC 4 cut(s) 794, 980, 1819, 2166
FauNDI CATATG 1 cut(s) 2320
FblI GTMKAC 2 cut(s) 846, 1869
Fnu4HI GCNGC 9 cut(s) 35, 60, 81, 84, 373, 389, 439, 667, 876
FokI GGATG 6 cut(s) 135, 485, 560, 1049, 1165, 2139
Fsp4HI GCNGC 9 cut(s) 35, 60, 81, 84, 373, 389, 439, 667, 876
GlaI GCGC 4 cut(s) 87, 562, 1417, 2331
GluI GCNGC 9 cut(s) 35, 60, 81, 84, 373, 389, 439, 667, 876
GsaI CCCAGC 1 cut(s) 2207
GsuI CTGGAG 1 cut(s) 987
HaeII RGCGCY 1 cut(s) 1419
HaeIII GGCC 7 cut(s) 5, 59, 168, 503, 1733, 2098, 2117
HapII CCGG 4 cut(s) 489, 755, 850, 892
HgaI GACGC 3 cut(s) 1816, 1946, 2015
HhaI GCGC 4 cut(s) 88, 563, 1418, 2332
Hin1I GRCGYC 2 cut(s) 1416, 1866
Hin6I GCGC 4 cut(s) 86, 561, 1416, 2330
HinP1I GCGC 4 cut(s) 86, 561, 1416, 2330
HincII GTYRAC 2 cut(s) 301, 847
HindII GTYRAC 2 cut(s) 301, 847
HindIII AAGCTT 2 cut(s) 177, 2226
HinfI GANTC 6 cut(s) 22, 218, 539, 1035, 1275, 1330
HpaII CCGG 4 cut(s) 489, 755, 850, 892
Hpy166II GTNNAC 8 cut(s) 201, 301, 380, 584, 614, 847, 951, 1870
Hpy188I TCNGA 3 cut(s) 1040, 1744, 2224
Hpy188III TCNNGA 5 cut(s) 935, 1688, 1772, 2003, 2183
Hpy8I GTNNAC 8 cut(s) 201, 301, 380, 584, 614, 847, 951, 1870
Hpy99I CGWCG 1 cut(s) 626
HpyAV CCTTC 7 cut(s) 405, 683, 905, 1294, 1334, 2109, 2255
HpyCH4III ACNGT 5 cut(s) 257, 305, 626, 1217, 1357
HpyCH4IV ACGT 3 cut(s) 444, 1692, 1866
HpyF10VI GCNNNNNNNGC 4 cut(s) 558, 903, 1807, 2060
HpyF3I CTNAG 3 cut(s) 1782, 2075, 2193
HpySE526I ACGT 3 cut(s) 444, 1692, 1866
Hsp92I GRCGYC 2 cut(s) 1416, 1866
HspAI GCGC 4 cut(s) 86, 561, 1416, 2330
KasI GGCGCC 1 cut(s) 1415
KflI GGGWCCC 1 cut(s) 967
Kzo9I GATC 3 cut(s) 640, 1589, 1774
LmnI GCTCC 3 cut(s) 1256, 1343, 1751
Lsp1109I GCAGC 7 cut(s) 21, 92, 375, 384, 425, 678, 862
LweI GCATC 6 cut(s) 113, 555, 1071, 1708, 2161, 2317
MaeII ACGT 3 cut(s) 444, 1692, 1866
MaeIII GTNAC 5 cut(s) 28, 309, 881, 1862, 2208
MalI GATC 3 cut(s) 642, 1591, 1776
MboI GATC 3 cut(s) 640, 1589, 1774
MboII GAAGA 5 cut(s) 698, 814, 1301, 1630, 1962
MfeI CAATTG 1 cut(s) 600
MhlI GDGCHC 2 cut(s) 953, 1645
MlsI TGGCCA 1 cut(s) 2117
MluNI TGGCCA 1 cut(s) 2117
Mly113I GGCGCC 1 cut(s) 1416
MlyI GAGTC 1 cut(s) 548
MmeI TCCRAC 1 cut(s) 2106
Mox20I TGGCCA 1 cut(s) 2117
MroXI GAANNNNTTC 2 cut(s) 1202, 1833
MscI TGGCCA 1 cut(s) 2117
MseI TTAA 9 cut(s) 47, 618, 765, 1191, 1223, 1296, 1443, 1901, 2312
MslI CAYNNNNRTG 2 cut(s) 1323, 1479
Msp20I TGGCCA 1 cut(s) 2117
MspA1I CMGCKG 2 cut(s) 83, 1286
MspCI CTTAAG 1 cut(s) 1295
MspI CCGG 4 cut(s) 489, 755, 850, 892
MspR9I CCNGG 5 cut(s) 120, 646, 903, 1005, 1075
MunI CAATTG 1 cut(s) 600
Mva1269I GAATGC 2 cut(s) 1368, 2139
MvaI CCWGG 5 cut(s) 120, 646, 903, 1005, 1075
MvnI CGCG 3 cut(s) 635, 1759, 2332
MwoI GCNNNNNNNGC 4 cut(s) 558, 903, 1807, 2060
NarI GGCGCC 1 cut(s) 1416
NcoI CCATGG 3 cut(s) 1549, 2118, 2156
NdeI CATATG 1 cut(s) 2320
NdeII GATC 3 cut(s) 640, 1589, 1774
NheI GCTAGC 2 cut(s) 76, 1786
NlaIV GGNNCC 7 cut(s) 917, 968, 969, 1258, 1345, 1417, 1824
NmeAIII GCCGAG 1 cut(s) 152
NmuCI GTSAC 2 cut(s) 1862, 2208
NspI RCATGY 1 cut(s) 2299
PaeI GCATGC 1 cut(s) 2299
PaeR7I CTCGAG 1 cut(s) 383
PasI CCCWGGG 1 cut(s) 645
PceI AGGCCT 1 cut(s) 2098
PcsI WCGNNNNNNNCGW 1 cut(s) 678
PctI GAATGC 2 cut(s) 1368, 2139
PdmI GAANNNNTTC 2 cut(s) 1202, 1833
PfeI GAWTC 5 cut(s) 22, 218, 1035, 1275, 1330
PflFI GACNNNGTC 1 cut(s) 538
PkrI GCNGC 9 cut(s) 36, 61, 82, 85, 374, 390, 440, 668, 877
PleI GAGTC 1 cut(s) 547
PluTI GGCGCC 1 cut(s) 1419
PpsI GAGTC 1 cut(s) 547
PpuMI RGGWCCY 1 cut(s) 967
PsiI TTATAA 3 cut(s) 360, 630, 1362
Psp1406I AACGTT 1 cut(s) 444
Psp5II RGGWCCY 1 cut(s) 967
Psp6I CCWGG 5 cut(s) 118, 644, 901, 1003, 1073
PspEI GGTNACC 1 cut(s) 2208
PspFI CCCAGC 1 cut(s) 2203
PspGI CCWGG 5 cut(s) 118, 644, 901, 1003, 1073
PspN4I GGNNCC 7 cut(s) 917, 968, 969, 1258, 1345, 1417, 1824
PspPI GGNCC 2 cut(s) 967, 1822
PspPPI RGGWCCY 1 cut(s) 967
PspXI VCTCGAGB 1 cut(s) 383
PstI CTGCAG 1 cut(s) 880
PsyI GACNNNGTC 1 cut(s) 538
RsaI GTAC 7 cut(s) 259, 856, 923, 1202, 1541, 2198, 2275
RsaNI GTAC 7 cut(s) 258, 855, 922, 1201, 1540, 2197, 2274
RseI CAYNNNNRTG 2 cut(s) 1323, 1479
SalI GTCGAC 1 cut(s) 845
SaqAI TTAA 9 cut(s) 47, 618, 765, 1191, 1223, 1296, 1443, 1901, 2312
SatI GCNGC 9 cut(s) 35, 60, 81, 84, 373, 389, 439, 667, 876
Sau3AI GATC 3 cut(s) 640, 1589, 1774
Sau96I GGNCC 2 cut(s) 967, 1822
ScaI AGTACT 2 cut(s) 1202, 2198
SchI GAGTC 1 cut(s) 548
ScrFI CCNGG 5 cut(s) 120, 646, 903, 1005, 1075
SduI GDGCHC 2 cut(s) 953, 1645
SfaNI GCATC 6 cut(s) 113, 555, 1071, 1708, 2161, 2317
SfcI CTRYAG 2 cut(s) 876, 1870
SfoI GGCGCC 1 cut(s) 1417
Sfr274I CTCGAG 1 cut(s) 383
SinI GGWCC 2 cut(s) 967, 1822
SlaI CTCGAG 1 cut(s) 383
SmiMI CAYNNNNRTG 2 cut(s) 1323, 1479
SmlI CTYRAG 3 cut(s) 108, 383, 1295
SmoI CTYRAG 3 cut(s) 108, 383, 1295
SpeI ACTAGT 3 cut(s) 1528, 1795, 2279
SphI GCATGC 1 cut(s) 2299
SseBI AGGCCT 1 cut(s) 2098
SsiI CCGC 5 cut(s) 60, 83, 138, 1286, 1595
SspDI GGCGCC 1 cut(s) 1415
StuI AGGCCT 1 cut(s) 2098
StyD4I CCNGG 5 cut(s) 118, 644, 901, 1003, 1073
StyI CCWWGG 5 cut(s) 169, 433, 1549, 2118, 2156
TaaI ACNGT 5 cut(s) 257, 305, 626, 1217, 1357
TaiI ACGT 3 cut(s) 447, 1695, 1869
TaqI TCGA 5 cut(s) 384, 846, 934, 942, 1687
TaqII GACCGA 1 cut(s) 551
TatI WGTACW 4 cut(s) 257, 1200, 1539, 2196
TauI GCSGC 2 cut(s) 62, 86
TfiI GAWTC 5 cut(s) 22, 218, 1035, 1275, 1330
Tru1I TTAA 9 cut(s) 47, 618, 765, 1191, 1223, 1296, 1443, 1901, 2312
Tru9I TTAA 9 cut(s) 47, 618, 765, 1191, 1223, 1296, 1443, 1901, 2312
TseFI GTSAC 2 cut(s) 1862, 2208
TseI GCWGC 7 cut(s) 34, 80, 372, 388, 438, 666, 875
Tsp45I GTSAC 2 cut(s) 1862, 2208
TspDTI ATGAA 9 cut(s) 231, 667, 1181, 1590, 1753, 1826, 2120, 2166, 2274
Tth111I GACNNNGTC 1 cut(s) 538
Vha464I CTTAAG 1 cut(s) 1295
VneI GTGCAC 1 cut(s) 949
VpaK11BI GGWCC 2 cut(s) 967, 1822
XagI CCTNNNNNAGG 1 cut(s) 961
XapI RAATTY 4 cut(s) 994, 1998, 2173, 2301
XbaI TCTAGA 1 cut(s) 1771
XceI RCATGY 1 cut(s) 2299
XhoI CTCGAG 1 cut(s) 383
XmaJI CCTAGG 1 cut(s) 169
XmiI GTMKAC 2 cut(s) 846, 1869
XmnI GAANNNNTTC 2 cut(s) 1202, 1833
ZraI GACGTC 1 cut(s) 1867
ZrmI AGTACT 2 cut(s) 1202, 2198
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.