RchiOBHm_Chr1g0326861

specification of plant organ axis polarity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000066
Physical Location & Seq
Forward (+)
15418844 .. 15420066
1223 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55643

Sequence Viewer

Length: 1062 bp
ATGTCGATCATGGCCTTGCAATTTCCATTGGCGGCAGTCCTACTCCTATTATCGGCGGCTAGAACTACGAAAACAACAGCTGCTGCTCAAGCCCTGCCTGGCTGCTCTGACAAGTGCGGCGATCTCACAATTCCATATCCATTTGGCATGAACAAGGATTGTTACCTGCGAGAAGAATTCTTTATCAATTGTAGCAATACCGCCCAACCACCAACAGCATATTTGATGACAAGCAATTTAACTGTTACTAACATTTCCCTTGATGATGGTGAGTTGCGAATATTGAACATGGGAGCTGAAGATTGCTATAACGCCCAGGGCAATGTGACGTCCAACTTCCCTTATGAGCTCAGCCTCCCTCTTCCTTATACGATCTCCTATACCAAAAATAAGTTCTACACCGTTGGTTGTGACTCACTTTCAATTTTCCAAGGCTTCCGAGGGGAAGACGAGCTCGAGATGGGGTGCATGTCCATGTGCAACAGGCTTGACATTGTTGATCAATATTCTTGCTCTGGCGCTGGGTGTTGCCAGACTAATATTCCCAGAGGACTGAAAAATGTGACGGTGTTATTGGACAGCCTTGACAATCATGCTGGTATATGGGAATTTAACCCCTGCGGCTACGCCTTCATTGCAGAGCAAGGACAGTTCAATTTCTCTGCTGCAAGTTTAAAGAAACAGAACAACTACCAGCTTCCGTCGGTTCTTAATTGGGCTATTGGGAATGAAACAGACTCCTGTGATGAAGCTCACAAGAAGACGAATTTCGCATGCAAGGCTAATAGCATGTGCGTCAATGGGTCAGTAGGTTACTTGTGCCGGTGCTTGCCTGGTTATGAAGGAAACCCTTACCACCCAGATCGATGGTTGCCAAGGGCTTCAAACCTCTGCCAGAACGGACAGTGCTTAAATACTTTCCCTCCAGGAAACTACTCTTGTTCATGTCACAAAGGATACAAAAACGACGGCATGAATGACAAGAGTTGCATCGAAGACGATTCCAAAAGACACTCAAAGATCGTTCTCCTGCTTATAGTTTCATTGGGTATGTATAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase_Tyr

Protein Analysis

353

Amino Acids

38.88

Weight (kDa)

5.28

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 95 8.4e-12 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 332
Acc36I ACCTGC 1 cut(s) 174
AciI CCGC 5 cut(s) 32, 56, 117, 201, 621
AcsI RAATTY 3 cut(s) 176, 608, 766
AcuI CTGAAG 1 cut(s) 318
AcyI GRCGYC 1 cut(s) 329
AfiI CCNNNNNNNGG 1 cut(s) 52
AgsI TTSAA 4 cut(s) 286, 423, 655, 885
AjnI CCWGG 4 cut(s) 97, 315, 832, 925
AjuI GAANNNNNNNTTGG 2 cut(s) 377, 409
AluBI AGCT 6 cut(s) 80, 296, 349, 454, 697, 752
AluI AGCT 6 cut(s) 80, 296, 349, 454, 697, 752
Alw21I GWGCWC 2 cut(s) 351, 456
AlwNI CAGNNNCTG 1 cut(s) 83
Ama87I CYCGRG 1 cut(s) 455
AoxI GGCC 1 cut(s) 12
ApeKI GCWGC 4 cut(s) 80, 83, 102, 665
ApoI RAATTY 3 cut(s) 176, 608, 766
AspLEI GCGC 1 cut(s) 521
AsuHPI GGTGA 1 cut(s) 281
AvaI CYCGRG 1 cut(s) 455
BanII GRGCYC 2 cut(s) 351, 456
BbsI GAAGAC 3 cut(s) 453, 767, 1002
Bbv12I GWGCWC 2 cut(s) 351, 456
BbvI GCAGC 4 cut(s) 67, 70, 89, 652
BccI CCATC 3 cut(s) 260, 454, 861
BceAI ACGGC 1 cut(s) 985
BciT130I CCWGG 4 cut(s) 99, 317, 834, 927
BciVI GTATCC 1 cut(s) 950
BclI TGATCA 1 cut(s) 499
BfaI CTAG 1 cut(s) 60
BfoI RGCGCY 1 cut(s) 522
BfuAI ACCTGC 1 cut(s) 174
BfuI GTATCC 1 cut(s) 950
BisI GCNGC 8 cut(s) 33, 57, 81, 84, 103, 118, 622, 666
BlpI GCTNAGC 1 cut(s) 350
BlsI GCNGC 8 cut(s) 34, 58, 82, 85, 104, 119, 623, 667
Bme1390I CCNGG 4 cut(s) 99, 317, 834, 927
BmeT110I CYCGRG 1 cut(s) 455
BmrFI CCNGG 4 cut(s) 99, 317, 834, 927
BmsI GCATC 1 cut(s) 999
BpiI GAAGAC 3 cut(s) 453, 767, 1002
BpmI CTGGAG 1 cut(s) 909
Bpu1102I GCTNAGC 1 cut(s) 350
BpuEI CTTGAG 1 cut(s) 72
Bsa29I ATCGAT 1 cut(s) 865
BsaHI GRCGYC 1 cut(s) 329
BsaJI CCNNGG 5 cut(s) 315, 316, 430, 439, 875
BsaXI ACNNNNNCTCC 2 cut(s) 907, 937
Bsc4I CCNNNNNNNGG 1 cut(s) 52
Bse118I RCCGGY 1 cut(s) 822
Bse3DI GCAATG 2 cut(s) 328, 633
BseBI CCWGG 4 cut(s) 99, 317, 834, 927
BseCI ATCGAT 1 cut(s) 865
BseDI CCNNGG 5 cut(s) 315, 316, 430, 439, 875
BseLI CCNNNNNNNGG 1 cut(s) 52
BseMI GCAATG 2 cut(s) 328, 633
BseMII CTCAG 1 cut(s) 364
BseXI GCAGC 4 cut(s) 67, 70, 89, 652
BseYI CCCAGC 1 cut(s) 521
BshFI GGCC 1 cut(s) 14
BshVI ATCGAT 1 cut(s) 865
BsiHKAI GWGCWC 2 cut(s) 351, 456
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 1 cut(s) 823
BslI CCNNNNNNNGG 1 cut(s) 52
BsnI GGCC 1 cut(s) 14
BsoBI CYCGRG 1 cut(s) 455
Bsp1286I GDGCHC 2 cut(s) 351, 456
Bsp143I GATC 6 cut(s) 6, 121, 372, 499, 862, 1020
Bsp1720I GCTNAGC 1 cut(s) 350
BspACI CCGC 5 cut(s) 32, 56, 117, 201, 621
BspANI GGCC 1 cut(s) 14
BspCNI CTCAG 1 cut(s) 363
BspDI ATCGAT 1 cut(s) 865
BspMI ACCTGC 1 cut(s) 174
BsrDI GCAATG 2 cut(s) 328, 633
BsrFI RCCGGY 1 cut(s) 822
BssAI RCCGGY 1 cut(s) 822
BssECI CCNNGG 5 cut(s) 315, 316, 430, 439, 875
BssMI GATC 6 cut(s) 6, 121, 372, 499, 862, 1020
BssNI GRCGYC 1 cut(s) 329
BssT1I CCWWGG 2 cut(s) 430, 875
Bst2UI CCWGG 4 cut(s) 99, 317, 834, 927
Bst4CI ACNGT 5 cut(s) 244, 403, 568, 651, 906
Bst6I CTCTTC 1 cut(s) 366
BstACI GRCGYC 1 cut(s) 329
BstC8I GCNNGC 2 cut(s) 775, 830
BstDEI CTNAG 1 cut(s) 350
BstH2I RGCGCY 1 cut(s) 522
BstHHI GCGC 1 cut(s) 521
BstKTI GATC 6 cut(s) 9, 124, 375, 502, 865, 1023
BstMBI GATC 6 cut(s) 6, 121, 372, 499, 862, 1020
BstMWI GCNNNNNNNGC 3 cut(s) 89, 635, 779
BstNI CCWGG 4 cut(s) 99, 317, 834, 927
BstNSI RCATGY 3 cut(s) 472, 777, 793
BstSCI CCNGG 4 cut(s) 97, 315, 832, 925
BstV1I GCAGC 4 cut(s) 67, 70, 89, 652
BstV2I GAAGAC 3 cut(s) 453, 767, 1002
BstXI CCANNNNNNTGG 1 cut(s) 867
Bsu15I ATCGAT 1 cut(s) 865
BsuI GTATCC 1 cut(s) 950
BsuRI GGCC 1 cut(s) 14
BsuTUI ATCGAT 1 cut(s) 865
BtsIMutI CAGTG 1 cut(s) 911
BveI ACCTGC 1 cut(s) 174
Cac8I GCNNGC 2 cut(s) 775, 830
CaiI CAGNNNCTG 1 cut(s) 83
CfoI GCGC 1 cut(s) 521
Cfr10I RCCGGY 1 cut(s) 822
ClaI ATCGAT 1 cut(s) 865
CseI GACGC 1 cut(s) 784
DdeI CTNAG 1 cut(s) 350
DpnI GATC 6 cut(s) 8, 123, 374, 501, 864, 1022
DpnII GATC 6 cut(s) 6, 121, 372, 499, 862, 1020
DraI TTTAAA 1 cut(s) 675
Eam1104I CTCTTC 1 cut(s) 366
EarI CTCTTC 1 cut(s) 366
Ecl136II GAGCTC 2 cut(s) 349, 454
Eco130I CCWWGG 2 cut(s) 430, 875
Eco24I GRGCYC 2 cut(s) 351, 456
Eco53kI GAGCTC 2 cut(s) 349, 454
Eco57I CTGAAG 1 cut(s) 318
Eco88I CYCGRG 1 cut(s) 455
EcoICRI GAGCTC 2 cut(s) 349, 454
EcoRI GAATTC 1 cut(s) 176
EcoRII CCWGG 4 cut(s) 97, 315, 832, 925
EcoT14I CCWWGG 2 cut(s) 430, 875
EcoT38I GRGCYC 2 cut(s) 351, 456
ErhI CCWWGG 2 cut(s) 430, 875
FbaI TGATCA 1 cut(s) 499
Fnu4HI GCNGC 8 cut(s) 33, 57, 81, 84, 103, 118, 622, 666
FriOI GRGCYC 2 cut(s) 351, 456
Fsp4HI GCNGC 8 cut(s) 33, 57, 81, 84, 103, 118, 622, 666
FspBI CTAG 1 cut(s) 60
GlaI GCGC 1 cut(s) 520
GluI GCNGC 8 cut(s) 33, 57, 81, 84, 103, 118, 622, 666
GsaI CCCAGC 1 cut(s) 525
GsuI CTGGAG 1 cut(s) 909
HaeII RGCGCY 1 cut(s) 522
HaeIII GGCC 1 cut(s) 14
HapII CCGG 1 cut(s) 823
HgaI GACGC 1 cut(s) 784
HhaI GCGC 1 cut(s) 521
Hin1I GRCGYC 1 cut(s) 329
Hin6I GCGC 1 cut(s) 519
HinP1I GCGC 1 cut(s) 519
HinfI GANTC 3 cut(s) 413, 737, 1001
HpaII CCGG 1 cut(s) 823
HphI GGTGA 1 cut(s) 281
Hpy188I TCNGA 2 cut(s) 109, 440
Hpy188III TCNNGA 1 cut(s) 457
Hpy99I CGWCG 2 cut(s) 706, 971
HpyAV CCTTC 2 cut(s) 640, 836
HpyCH4III ACNGT 5 cut(s) 244, 403, 568, 651, 906
HpyCH4IV ACGT 1 cut(s) 329
HpyCH4V TGCA 7 cut(s) 19, 468, 480, 638, 668, 777, 990
HpyF10VI GCNNNNNNNGC 3 cut(s) 89, 635, 779
HpyF3I CTNAG 1 cut(s) 350
HpySE526I ACGT 1 cut(s) 329
Hsp92I GRCGYC 1 cut(s) 329
HspAI GCGC 1 cut(s) 519
Ksp22I TGATCA 1 cut(s) 499
Kzo9I GATC 6 cut(s) 6, 121, 372, 499, 862, 1020
LmnI GCTCC 1 cut(s) 293
Lsp1109I GCAGC 4 cut(s) 67, 70, 89, 652
LweI GCATC 1 cut(s) 999
MaeI CTAG 1 cut(s) 60
MaeII ACGT 1 cut(s) 329
MaeIII GTNAC 7 cut(s) 161, 244, 325, 410, 562, 812, 947
MalI GATC 6 cut(s) 8, 123, 374, 501, 864, 1022
MboI GATC 6 cut(s) 6, 121, 372, 499, 862, 1020
MboII GAAGA 6 cut(s) 185, 311, 353, 458, 772, 1007
MfeI CAATTG 1 cut(s) 187
MhlI GDGCHC 2 cut(s) 351, 456
MlyI GAGTC 2 cut(s) 407, 731
MmeI TCCRAC 1 cut(s) 357
MnlI CCTC 6 cut(s) 365, 369, 434, 542, 899, 933
MseI TTAA 5 cut(s) 239, 612, 674, 711, 911
MslI CAYNNNNRTG 1 cut(s) 473
MspA1I CMGCKG 1 cut(s) 80
MspI CCGG 1 cut(s) 823
MspR9I CCNGG 4 cut(s) 99, 317, 834, 927
MunI CAATTG 1 cut(s) 187
MvaI CCWGG 4 cut(s) 99, 317, 834, 927
MwoI GCNNNNNNNGC 3 cut(s) 89, 635, 779
NdeII GATC 6 cut(s) 6, 121, 372, 499, 862, 1020
NmuCI GTSAC 4 cut(s) 325, 410, 562, 947
NspI RCATGY 3 cut(s) 472, 777, 793
PaeI GCATGC 1 cut(s) 777
PaeR7I CTCGAG 1 cut(s) 455
PasI CCCWGGG 1 cut(s) 316
PfeI GAWTC 1 cut(s) 1001
PfoI TCCNGGA 1 cut(s) 925
PkrI GCNGC 8 cut(s) 34, 58, 82, 85, 104, 119, 623, 667
PleI GAGTC 2 cut(s) 407, 731
PpsI GAGTC 2 cut(s) 407, 731
Psp124BI GAGCTC 2 cut(s) 351, 456
Psp6I CCWGG 4 cut(s) 97, 315, 832, 925
PspFI CCCAGC 1 cut(s) 521
PspGI CCWGG 4 cut(s) 97, 315, 832, 925
PstNI CAGNNNCTG 1 cut(s) 83
PvuII CAGCTG 1 cut(s) 80
RseI CAYNNNNRTG 1 cut(s) 473
SacI GAGCTC 2 cut(s) 351, 456
SaqAI TTAA 5 cut(s) 239, 612, 674, 711, 911
SatI GCNGC 8 cut(s) 33, 57, 81, 84, 103, 118, 622, 666
Sau3AI GATC 6 cut(s) 6, 121, 372, 499, 862, 1020
SchI GAGTC 2 cut(s) 407, 731
ScrFI CCNGG 4 cut(s) 99, 317, 834, 927
SduI GDGCHC 2 cut(s) 351, 456
SfaNI GCATC 1 cut(s) 999
Sfr274I CTCGAG 1 cut(s) 455
SlaI CTCGAG 1 cut(s) 455
SmiMI CAYNNNNRTG 1 cut(s) 473
SmlI CTYRAG 2 cut(s) 87, 455
SmoI CTYRAG 2 cut(s) 87, 455
SphI GCATGC 1 cut(s) 777
SsiI CCGC 5 cut(s) 32, 56, 117, 201, 621
SspI AATATT 3 cut(s) 282, 506, 541
SspMI CTAG 1 cut(s) 60
SstI GAGCTC 2 cut(s) 351, 456
StyD4I CCNGG 4 cut(s) 97, 315, 832, 925
StyI CCWWGG 2 cut(s) 430, 875
TaaI ACNGT 5 cut(s) 244, 403, 568, 651, 906
TaiI ACGT 1 cut(s) 332
TaqI TCGA 4 cut(s) 5, 456, 865, 993
TauI GCSGC 4 cut(s) 35, 59, 120, 624
TfiI GAWTC 1 cut(s) 1001
Tru1I TTAA 5 cut(s) 239, 612, 674, 711, 911
Tru9I TTAA 5 cut(s) 239, 612, 674, 711, 911
TscAI CASTG 1 cut(s) 911
TseFI GTSAC 4 cut(s) 325, 410, 562, 947
TseI GCWGC 4 cut(s) 80, 83, 102, 665
Tsp45I GTSAC 4 cut(s) 325, 410, 562, 947
TspDTI ATGAA 8 cut(s) 164, 622, 744, 762, 855, 933, 989, 1032
TspGWI ACGGA 2 cut(s) 690, 915
TspRI CASTG 1 cut(s) 911
XapI RAATTY 3 cut(s) 176, 608, 766
XceI RCATGY 3 cut(s) 472, 777, 793
XhoI CTCGAG 1 cut(s) 455
XspI CTAG 1 cut(s) 60
ZraI GACGTC 1 cut(s) 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.