Rmu_sc0008053.1_g000016

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008053.1
OG0000066
Physical Location & Seq
Forward (+)
53767 .. 55907
2141 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008053.1_g000016.1.cds

Sequence Viewer

Length: 1506 bp
atggctaataggaattgcataaaccgtcatattgatgggtctgtaggttacttgtgccagtgcttgcctggttatgaaggaaacccgtaccacccagatggttgccaagatattgatgagtgcagcagggctttcaacccctgccagaatggacagtgcttaaatactccaggaaatcactcttgttcatgttacaaaggatacaaaaacgacggcatgaatgacaagatttgcatcaaagacgattccgaaagacactcaaagatcgttctcctgcttatggtttcattgggtgtaactgttggcttcttggttttattccttggaatttcgtggacatgttggggaatgaagaaaagagagctcattaaactcaaagaaaagcacttcaaagagaatggtggcttattgttactgcaacaactcgctagtcatggaagctcgatgaggacaacaaaaatctttcctgctgaagaacttgagaaagcaacaaacaactaccatgagagtagagtccttggagaaggaggttatggaacagtttacaaaggaatactaccggacgacacaatggttgccataaagaagtcgaaaggtggtaccttgacccagagtgatcaatttgttaacgaggtgattgttctttctcaaatcaaccacaaaaatgtggtaaagctattgggttgttgtttagaaacggaagtacctttactagtatacgaattcattacccatggcactcttaatgagcacattcataaaaaaggatcatcactcccatttgaattacgaatgaagatagcaactcaaagcgcggaagcactgtcccacttacactcctcaatttccacaccaataatacatcgagatgtgaaaacagcaaatattctgttagatgatgattatacagcaaaagtgtcagattttggagcttcccgattggttccttcaggtcaaactgatatacaaactctagtgcttgggacatttggatacctggaccctgaatatctgcaatcaaaccaactaacagaaaagagtgatgtttacagctttggagttgtcctagtggagctactatcaagcaaaatgccggtttctaaagatagatgcttagcaagcatctttcttgcttccatggaagaaggttggctgaatcaaatacttgatgatggcatagtgaatgagggaaacattgagacggtaaagaaagtggccaatctcgcaaagcgatgcttgagggtaaacggggaggaaaggcctaccatgaaagaagttgcgaaagagttagaggaaatgagtgtcacggcaaaacatccgtgggtatttaatgctaatttttgtgaagaagagactgaatacttgcttgggtcagttaattcagacgcttacgttgtgggtaatggagaaggtgattgcagttctagtggtctaaccagtggtacgaccactgcatatgacagcatgcaaatcgaacagttaatgccacatgatggtggacgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

501

Amino Acids

55.33

Weight (kDa)

5.56

Isoelectric Point (pI)

35.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 599
AccB1I GGYRCC 1 cut(s) 599
AccB7I CCANNNNNTGG 1 cut(s) 1493
AccI GTMKAC 1 cut(s) 717
AccII CGCG 1 cut(s) 815
AciI CCGC 1 cut(s) 815
AclWI GGATC 1 cut(s) 775
AcoI YGGCCR 1 cut(s) 1215
AcsI RAATTY 2 cut(s) 327, 722
AcuI CTGAAG 2 cut(s) 492, 933
AfaI GTAC 4 cut(s) 89, 601, 705, 1444
AfiI CCNNNNNNNGG 2 cut(s) 280, 1493
AflIII ACRYGT 1 cut(s) 338
AgsI TTSAA 3 cut(s) 136, 391, 785
AhlI ACTAGT 1 cut(s) 712
AjnI CCWGG 3 cut(s) 67, 169, 996
AjuI GAANNNNNNNTTGG 2 cut(s) 1350, 1382
AluBI AGCT 6 cut(s) 364, 441, 676, 932, 1053, 1075
AluI AGCT 6 cut(s) 364, 441, 676, 932, 1053, 1075
Alw21I GWGCWC 2 cut(s) 366, 753
Alw26I GTCTC 2 cut(s) 1193, 1346
AlwI GGATC 1 cut(s) 775
AoxI GGCC 2 cut(s) 1215, 1259
ApeKI GCWGC 1 cut(s) 123
ApoI RAATTY 2 cut(s) 327, 722
Asp718I GGTACC 1 cut(s) 599
AspLEI GCGC 1 cut(s) 815
AspS9I GGNCC 1 cut(s) 1000
AsuHPI GGTGA 2 cut(s) 646, 1424
AvaII GGWCC 1 cut(s) 1000
BaeI ACNNNNGTAYC 2 cut(s) 687, 720
BalI TGGCCA 1 cut(s) 1217
BanI GGYRCC 1 cut(s) 599
BanII GRGCYC 1 cut(s) 366
BarI GAAGNNNNNNTAC 2 cut(s) 693, 725
Bbv12I GWGCWC 2 cut(s) 366, 753
BbvI GCAGC 1 cut(s) 135
BccI CCATC 4 cut(s) 29, 92, 1166, 1487
BceAI ACGGC 2 cut(s) 229, 1323
BcgI CGANNNNNNTGC 2 cut(s) 1453, 1487
BciT130I CCWGG 3 cut(s) 69, 171, 998
BciVI GTATCC 2 cut(s) 194, 986
BclI TGATCA 1 cut(s) 616
BcoDI GTCTC 2 cut(s) 1193, 1346
BcuI ACTAGT 1 cut(s) 712
BfaI CTAG 5 cut(s) 429, 713, 974, 1067, 1425
BfmI CTRYAG 1 cut(s) 42
BfuI GTATCC 2 cut(s) 194, 986
BisI GCNGC 1 cut(s) 124
BlpI GCTNAGC 1 cut(s) 1114
BlsI GCNGC 1 cut(s) 125
Bme1390I CCNGG 3 cut(s) 69, 171, 998
Bme18I GGWCC 1 cut(s) 1000
BmgT120I GGNCC 1 cut(s) 1000
BmiI GGNNCC 3 cut(s) 601, 945, 1002
BmrFI CCNGG 3 cut(s) 69, 171, 998
BmsI GCATC 4 cut(s) 243, 1100, 1131, 1223
BpmI CTGGAG 1 cut(s) 153
Bpu1102I GCTNAGC 1 cut(s) 1114
BpuEI CTTGAG 2 cut(s) 500, 1258
BsaBI GATNNNNATC 1 cut(s) 233
BsaJI CCNNGG 5 cut(s) 322, 517, 733, 1137, 1319
BsaWI WCCGGW 1 cut(s) 559
BsaXI ACNNNNNCTCC 2 cut(s) 821, 851
Bsc4I CCNNNNNNNGG 2 cut(s) 280, 1493
Bse118I RCCGGY 1 cut(s) 1093
Bse1I ACTGG 2 cut(s) 58, 1437
Bse8I GATNNNNATC 1 cut(s) 233
BseBI CCWGG 3 cut(s) 69, 171, 998
BseDI CCNNGG 5 cut(s) 322, 517, 733, 1137, 1319
BseGI GGATG 1 cut(s) 1315
BseJI GATNNNNATC 1 cut(s) 233
BseLI CCNNNNNNNGG 2 cut(s) 280, 1493
BseNI ACTGG 2 cut(s) 58, 1437
BseRI GAGGAG 1 cut(s) 829
BseXI GCAGC 1 cut(s) 135
BsgI GTGCAG 1 cut(s) 142
Bsh1236I CGCG 1 cut(s) 815
BshFI GGCC 2 cut(s) 1217, 1261
BshNI GGYRCC 1 cut(s) 599
BsiHKAI GWGCWC 2 cut(s) 366, 753
BsiSI CCGG 2 cut(s) 560, 1094
BslFI GGGAC 2 cut(s) 811, 997
BslI CCNNNNNNNGG 2 cut(s) 280, 1493
BsmAI GTCTC 2 cut(s) 1193, 1346
BsmBI CGTCTC 1 cut(s) 1193
BsmFI GGGAC 2 cut(s) 811, 997
BsnI GGCC 2 cut(s) 1217, 1261
Bsp1286I GDGCHC 2 cut(s) 366, 753
Bsp143I GATC 3 cut(s) 264, 616, 767
Bsp1720I GCTNAGC 1 cut(s) 1114
Bsp19I CCATGG 2 cut(s) 733, 1137
BspACI CCGC 1 cut(s) 815
BspANI GGCC 2 cut(s) 1217, 1261
BspFNI CGCG 1 cut(s) 815
BspLI GGNNCC 3 cut(s) 601, 945, 1002
BspPI GGATC 1 cut(s) 775
BspT107I GGYRCC 1 cut(s) 599
BsrFI RCCGGY 1 cut(s) 1093
BsrI ACTGG 2 cut(s) 58, 1437
BssAI RCCGGY 1 cut(s) 1093
BssECI CCNNGG 5 cut(s) 322, 517, 733, 1137, 1319
BssMI GATC 3 cut(s) 264, 616, 767
BssNAI GTATAC 1 cut(s) 718
BssT1I CCWWGG 4 cut(s) 322, 517, 733, 1137
Bst1107I GTATAC 1 cut(s) 718
Bst2UI CCWGG 3 cut(s) 69, 171, 998
Bst4CI ACNGT 7 cut(s) 26, 156, 301, 541, 825, 1204, 1479
Bst6I CTCTTC 1 cut(s) 1344
BstC8I GCNNGC 3 cut(s) 65, 1120, 1466
BstDEI CTNAG 1 cut(s) 1114
BstDSI CCRYGG 3 cut(s) 733, 1137, 1319
BstF5I GGATG 1 cut(s) 1315
BstFNI CGCG 1 cut(s) 815
BstHHI GCGC 1 cut(s) 815
BstKTI GATC 3 cut(s) 267, 619, 770
BstMAI GTCTC 2 cut(s) 1193, 1346
BstMBI GATC 3 cut(s) 264, 616, 767
BstMWI GCNNNNNNNGC 2 cut(s) 1119, 1223
BstNI CCWGG 3 cut(s) 69, 171, 998
BstNSI RCATGY 2 cut(s) 342, 1468
BstSCI CCNGG 3 cut(s) 67, 169, 996
BstSFI CTRYAG 1 cut(s) 42
BstUI CGCG 1 cut(s) 815
BstV1I GCAGC 1 cut(s) 135
BstXI CCANNNNNNTGG 1 cut(s) 98
BstZ17I GTATAC 1 cut(s) 718
BsuI GTATCC 2 cut(s) 194, 986
BsuRI GGCC 2 cut(s) 1217, 1261
BtgI CCRYGG 3 cut(s) 733, 1137, 1319
BtgZI GCGATG 1 cut(s) 1246
BtsCI GGATG 1 cut(s) 1315
BtsI GCAGTG 1 cut(s) 1449
BtsIMutI CAGTG 5 cut(s) 65, 161, 821, 1444, 1449
Cac8I GCNNGC 3 cut(s) 65, 1120, 1466
CfoI GCGC 1 cut(s) 815
Cfr10I RCCGGY 1 cut(s) 1093
Cfr13I GGNCC 1 cut(s) 1000
CseI GACGC 1 cut(s) 1394
Csp6I GTAC 4 cut(s) 88, 600, 704, 1443
CviQI GTAC 4 cut(s) 88, 600, 704, 1443
DdeI CTNAG 1 cut(s) 1114
DpnI GATC 3 cut(s) 266, 618, 769
DpnII GATC 3 cut(s) 264, 616, 767
EaeI YGGCCR 1 cut(s) 1215
Eam1104I CTCTTC 1 cut(s) 1344
EarI CTCTTC 1 cut(s) 1344
Ecl136II GAGCTC 1 cut(s) 364
Eco130I CCWWGG 4 cut(s) 322, 517, 733, 1137
Eco147I AGGCCT 1 cut(s) 1261
Eco24I GRGCYC 1 cut(s) 366
Eco47I GGWCC 1 cut(s) 1000
Eco53kI GAGCTC 1 cut(s) 364
Eco57I CTGAAG 2 cut(s) 492, 933
EcoICRI GAGCTC 1 cut(s) 364
EcoRI GAATTC 1 cut(s) 722
EcoRII CCWGG 3 cut(s) 67, 169, 996
EcoT14I CCWWGG 4 cut(s) 322, 517, 733, 1137
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 4 cut(s) 322, 517, 733, 1137
Esp3I CGTCTC 1 cut(s) 1193
FalI AAGNNNNNCTT 2 cut(s) 1220, 1252
FaqI GGGAC 2 cut(s) 811, 997
FauNDI CATATG 1 cut(s) 1456
FbaI TGATCA 1 cut(s) 616
FblI GTMKAC 1 cut(s) 717
Fnu4HI GCNGC 1 cut(s) 124
FokI GGATG 1 cut(s) 1302
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 1 cut(s) 124
FspBI CTAG 5 cut(s) 429, 713, 974, 1067, 1425
GlaI GCGC 1 cut(s) 814
GluI GCNGC 1 cut(s) 124
GsuI CTGGAG 1 cut(s) 153
HaeIII GGCC 2 cut(s) 1217, 1261
HapII CCGG 2 cut(s) 560, 1094
HgaI GACGC 1 cut(s) 1394
HhaI GCGC 1 cut(s) 815
Hin6I GCGC 1 cut(s) 813
HinP1I GCGC 1 cut(s) 813
HincII GTYRAC 1 cut(s) 628
HindII GTYRAC 1 cut(s) 628
HinfI GANTC 3 cut(s) 245, 513, 1156
HpaI GTTAAC 1 cut(s) 628
HpaII CCGG 2 cut(s) 560, 1094
HphI GGTGA 2 cut(s) 646, 1424
Hpy166II GTNNAC 7 cut(s) 336, 544, 628, 718, 1048, 1246, 1499
Hpy188I TCNGA 3 cut(s) 250, 922, 1384
Hpy188III TCNNGA 2 cut(s) 866, 936
Hpy8I GTNNAC 7 cut(s) 336, 544, 628, 718, 1048, 1246, 1499
Hpy99I CGWCG 1 cut(s) 215
HpyAV CCTTC 5 cut(s) 71, 518, 957, 1139, 1403
HpyCH4III ACNGT 7 cut(s) 26, 156, 301, 541, 825, 1204, 1479
HpyCH4IV ACGT 1 cut(s) 1392
HpyCH4V TGCA 8 cut(s) 18, 123, 234, 418, 1015, 1419, 1454, 1468
HpyF10VI GCNNNNNNNGC 2 cut(s) 1119, 1223
HpyF3I CTNAG 1 cut(s) 1114
HpySE526I ACGT 1 cut(s) 1392
HspAI GCGC 1 cut(s) 813
KpnI GGTACC 1 cut(s) 603
Ksp22I TGATCA 1 cut(s) 616
KspAI GTTAAC 1 cut(s) 628
Kzo9I GATC 3 cut(s) 264, 616, 767
LmnI GCTCC 2 cut(s) 929, 1072
Lsp1109I GCAGC 1 cut(s) 135
LweI GCATC 4 cut(s) 243, 1100, 1131, 1223
MaeI CTAG 5 cut(s) 429, 713, 974, 1067, 1425
MaeII ACGT 1 cut(s) 1392
MaeIII GTNAC 5 cut(s) 47, 191, 295, 411, 1303
MalI GATC 3 cut(s) 266, 618, 769
MboI GATC 3 cut(s) 264, 616, 767
MboII GAAGA 6 cut(s) 364, 485, 808, 1154, 1358, 1361
MhlI GDGCHC 2 cut(s) 366, 753
MlsI TGGCCA 1 cut(s) 1217
MluCI AATT 8 cut(s) 13, 327, 620, 722, 785, 843, 1336, 1378
MluNI TGGCCA 1 cut(s) 1217
MlyI GAGTC 1 cut(s) 522
MnlI CCTC 8 cut(s) 441, 521, 625, 850, 1180, 1233, 1246, 1285
Mox20I TGGCCA 1 cut(s) 1217
MscI TGGCCA 1 cut(s) 1217
MseI TTAA 7 cut(s) 161, 369, 627, 744, 1329, 1377, 1481
MslI CAYNNNNRTG 5 cut(s) 33, 96, 663, 867, 1494
Msp20I TGGCCA 1 cut(s) 1217
MspI CCGG 2 cut(s) 560, 1094
MspR9I CCNGG 3 cut(s) 69, 171, 998
MvaI CCWGG 3 cut(s) 69, 171, 998
MvnI CGCG 1 cut(s) 815
MwoI GCNNNNNNNGC 2 cut(s) 1119, 1223
NcoI CCATGG 2 cut(s) 733, 1137
NdeI CATATG 1 cut(s) 1456
NdeII GATC 3 cut(s) 264, 616, 767
NlaIV GGNNCC 3 cut(s) 601, 945, 1002
NmuCI GTSAC 1 cut(s) 1303
NspI RCATGY 2 cut(s) 342, 1468
PaeI GCATGC 1 cut(s) 1468
PceI AGGCCT 1 cut(s) 1261
PciI ACATGT 1 cut(s) 338
PfeI GAWTC 2 cut(s) 245, 1156
PflMI CCANNNNNTGG 1 cut(s) 1493
PfoI TCCNGGA 1 cut(s) 169
PkrI GCNGC 1 cut(s) 125
PleI GAGTC 1 cut(s) 521
PpsI GAGTC 1 cut(s) 521
PscI ACATGT 1 cut(s) 338
Psp124BI GAGCTC 1 cut(s) 366
Psp6I CCWGG 3 cut(s) 67, 169, 996
PspGI CCWGG 3 cut(s) 67, 169, 996
PspN4I GGNNCC 3 cut(s) 601, 945, 1002
PspPI GGNCC 1 cut(s) 1000
RsaI GTAC 4 cut(s) 89, 601, 705, 1444
RsaNI GTAC 4 cut(s) 88, 600, 704, 1443
RseI CAYNNNNRTG 5 cut(s) 33, 96, 663, 867, 1494
SacI GAGCTC 1 cut(s) 366
SaqAI TTAA 7 cut(s) 161, 369, 627, 744, 1329, 1377, 1481
SatI GCNGC 1 cut(s) 124
Sau3AI GATC 3 cut(s) 264, 616, 767
Sau96I GGNCC 1 cut(s) 1000
SchI GAGTC 1 cut(s) 522
ScrFI CCNGG 3 cut(s) 69, 171, 998
SduI GDGCHC 2 cut(s) 366, 753
SfaNI GCATC 4 cut(s) 243, 1100, 1131, 1223
SfcI CTRYAG 1 cut(s) 42
SinI GGWCC 1 cut(s) 1000
SmiMI CAYNNNNRTG 5 cut(s) 33, 96, 663, 867, 1494
SmlI CTYRAG 2 cut(s) 479, 1237
SmoI CTYRAG 2 cut(s) 479, 1237
SpeI ACTAGT 1 cut(s) 712
SphI GCATGC 1 cut(s) 1468
Sse9I AATT 8 cut(s) 13, 327, 620, 722, 785, 843, 1336, 1378
SseBI AGGCCT 1 cut(s) 1261
SsiI CCGC 1 cut(s) 815
SspI AATATT 1 cut(s) 886
SspMI CTAG 5 cut(s) 429, 713, 974, 1067, 1425
SstI GAGCTC 1 cut(s) 366
StuI AGGCCT 1 cut(s) 1261
StyD4I CCNGG 3 cut(s) 67, 169, 996
StyI CCWWGG 4 cut(s) 322, 517, 733, 1137
TaaI ACNGT 7 cut(s) 26, 156, 301, 541, 825, 1204, 1479
TaiI ACGT 1 cut(s) 1395
TaqI TCGA 4 cut(s) 443, 590, 865, 1473
TasI AATT 8 cut(s) 13, 327, 620, 722, 785, 843, 1336, 1378
TfiI GAWTC 2 cut(s) 245, 1156
Tru1I TTAA 7 cut(s) 161, 369, 627, 744, 1329, 1377, 1481
Tru9I TTAA 7 cut(s) 161, 369, 627, 744, 1329, 1377, 1481
TscAI CASTG 5 cut(s) 65, 161, 828, 1444, 1456
TseFI GTSAC 1 cut(s) 1303
TseI GCWGC 1 cut(s) 123
Tsp45I GTSAC 1 cut(s) 1303
TspDTI ATGAA 9 cut(s) 90, 177, 233, 276, 365, 715, 746, 809, 1283
TspGWI ACGGA 2 cut(s) 713, 1308
TspRI CASTG 5 cut(s) 65, 161, 828, 1444, 1456
Van91I CCANNNNNTGG 1 cut(s) 1493
VpaK11BI GGWCC 1 cut(s) 1000
XapI RAATTY 2 cut(s) 327, 722
XceI RCATGY 2 cut(s) 342, 1468
XcmI CCANNNNNNNNNTGG 1 cut(s) 65
XmiI GTMKAC 1 cut(s) 717
XspI CTAG 5 cut(s) 429, 713, 974, 1067, 1425
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.