specification of plant organ axis polarity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| EGF_CA | PF07645 | 249 - 279 | 1e-05 | Calcium-binding EGF domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 639 |
| Acc36I | ACCTGC | 3 cut(s) | 30, 219, 639 |
| AciI | CCGC | 1 cut(s) | 563 |
| AcsI | RAATTY | 2 cut(s) | 32, 802 |
| AdeI | CACNNNGTG | 1 cut(s) | 381 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 671, 779 |
| AgsI | TTSAA | 3 cut(s) | 279, 412, 511 |
| AjnI | CCWGG | 2 cut(s) | 551, 703 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 293, 325 |
| AluBI | AGCT | 2 cut(s) | 250, 611 |
| AluI | AGCT | 2 cut(s) | 250, 611 |
| Alw21I | GWGCWC | 1 cut(s) | 761 |
| Alw44I | GTGCAC | 1 cut(s) | 757 |
| AoxI | GGCC | 1 cut(s) | 662 |
| ApaLI | GTGCAC | 1 cut(s) | 757 |
| ApeKI | GCWGC | 1 cut(s) | 521 |
| ApoI | RAATTY | 2 cut(s) | 32, 802 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 626 |
| AspA2I | CCTAGG | 1 cut(s) | 295 |
| AspLEI | GCGC | 1 cut(s) | 656 |
| AspS9I | GGNCC | 1 cut(s) | 662 |
| AsuHPI | GGTGA | 2 cut(s) | 137, 436 |
| AvrII | CCTAGG | 1 cut(s) | 295 |
| BaeGI | GKGCMC | 1 cut(s) | 761 |
| Bbv12I | GWGCWC | 1 cut(s) | 761 |
| BbvI | GCAGC | 1 cut(s) | 508 |
| BccI | CCATC | 3 cut(s) | 446, 728, 735 |
| BceAI | ACGGC | 1 cut(s) | 777 |
| BciT130I | CCWGG | 2 cut(s) | 553, 705 |
| BciVI | GTATCC | 1 cut(s) | 427 |
| BclI | TGATCA | 1 cut(s) | 355 |
| BfaI | CTAG | 2 cut(s) | 296, 809 |
| BfmI | CTRYAG | 1 cut(s) | 475 |
| BfuAI | ACCTGC | 3 cut(s) | 30, 219, 639 |
| BfuI | GTATCC | 1 cut(s) | 427 |
| BisI | GCNGC | 1 cut(s) | 522 |
| BlnI | CCTAGG | 1 cut(s) | 295 |
| BlsI | GCNGC | 1 cut(s) | 523 |
| Bme1390I | CCNGG | 2 cut(s) | 553, 705 |
| BmgT120I | GGNCC | 1 cut(s) | 662 |
| BmrFI | CCNGG | 2 cut(s) | 553, 705 |
| BmrI | ACTGGG | 1 cut(s) | 387 |
| BmuI | ACTGGG | 1 cut(s) | 387 |
| BsaJI | CCNNGG | 2 cut(s) | 295, 499 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 581, 611 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 671, 779 |
| Bse1I | ACTGG | 1 cut(s) | 382 |
| Bse3DI | GCAATG | 3 cut(s) | 184, 489, 784 |
| BseBI | CCWGG | 2 cut(s) | 553, 705 |
| BseDI | CCNNGG | 2 cut(s) | 295, 499 |
| BseGI | GGATG | 3 cut(s) | 185, 396, 727 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 671, 779 |
| BseMI | GCAATG | 3 cut(s) | 184, 489, 784 |
| BseNI | ACTGG | 1 cut(s) | 382 |
| BseSI | GKGCMC | 1 cut(s) | 761 |
| BseXI | GCAGC | 1 cut(s) | 508 |
| BshFI | GGCC | 1 cut(s) | 664 |
| BsiHKAI | GWGCWC | 1 cut(s) | 761 |
| BslFI | GGGAC | 1 cut(s) | 476 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 671, 779 |
| BsmFI | GGGAC | 1 cut(s) | 476 |
| BsnI | GGCC | 1 cut(s) | 664 |
| Bsp1286I | GDGCHC | 1 cut(s) | 761 |
| Bsp143I | GATC | 1 cut(s) | 355 |
| BspACI | CCGC | 1 cut(s) | 563 |
| BspANI | GGCC | 1 cut(s) | 664 |
| BspMAI | CTGCAG | 1 cut(s) | 479 |
| BspMI | ACCTGC | 3 cut(s) | 30, 219, 639 |
| BsrDI | GCAATG | 3 cut(s) | 184, 489, 784 |
| BsrI | ACTGG | 1 cut(s) | 382 |
| BssECI | CCNNGG | 2 cut(s) | 295, 499 |
| BssMI | GATC | 1 cut(s) | 355 |
| BssT1I | CCWWGG | 2 cut(s) | 295, 499 |
| Bst2UI | CCWGG | 2 cut(s) | 553, 705 |
| Bst4CI | ACNGT | 5 cut(s) | 17, 259, 424, 446, 507 |
| BstC8I | GCNNGC | 1 cut(s) | 634 |
| BstF5I | GGATG | 3 cut(s) | 185, 396, 727 |
| BstHHI | GCGC | 1 cut(s) | 656 |
| BstKTI | GATC | 1 cut(s) | 358 |
| BstMBI | GATC | 1 cut(s) | 355 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 211, 491, 638 |
| BstNI | CCWGG | 2 cut(s) | 553, 705 |
| BstSCI | CCNGG | 2 cut(s) | 551, 703 |
| BstSFI | CTRYAG | 1 cut(s) | 475 |
| BstSLI | GKGCMC | 1 cut(s) | 761 |
| BstV1I | GCAGC | 1 cut(s) | 508 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 148, 734 |
| BsuI | GTATCC | 1 cut(s) | 427 |
| BsuRI | GGCC | 1 cut(s) | 664 |
| BtsCI | GGATG | 3 cut(s) | 185, 396, 727 |
| BtsIMutI | CAGTG | 1 cut(s) | 375 |
| BveI | ACCTGC | 3 cut(s) | 30, 219, 639 |
| Cac8I | GCNNGC | 1 cut(s) | 634 |
| CfoI | GCGC | 1 cut(s) | 656 |
| Cfr13I | GGNCC | 1 cut(s) | 662 |
| CsiI | ACCWGGT | 1 cut(s) | 703 |
| CviAII | CATG | 1 cut(s) | 148 |
| DpnI | GATC | 1 cut(s) | 357 |
| DpnII | GATC | 1 cut(s) | 355 |
| DraI | TTTAAA | 2 cut(s) | 531, 768 |
| DraIII | CACNNNGTG | 1 cut(s) | 381 |
| Eco130I | CCWWGG | 2 cut(s) | 295, 499 |
| Eco32I | GATATC | 1 cut(s) | 231 |
| EcoRI | GAATTC | 1 cut(s) | 32 |
| EcoRII | CCWGG | 2 cut(s) | 551, 703 |
| EcoRV | GATATC | 1 cut(s) | 231 |
| EcoT14I | CCWWGG | 2 cut(s) | 295, 499 |
| ErhI | CCWWGG | 2 cut(s) | 295, 499 |
| FaeI | CATG | 1 cut(s) | 151 |
| FaqI | GGGAC | 1 cut(s) | 476 |
| FatI | CATG | 1 cut(s) | 147 |
| FauNDI | CATATG | 1 cut(s) | 332 |
| FbaI | TGATCA | 1 cut(s) | 355 |
| Fnu4HI | GCNGC | 1 cut(s) | 522 |
| FokI | GGATG | 3 cut(s) | 172, 383, 714 |
| Fsp4HI | GCNGC | 1 cut(s) | 522 |
| FspBI | CTAG | 2 cut(s) | 296, 809 |
| GlaI | GCGC | 1 cut(s) | 655 |
| GluI | GCNGC | 1 cut(s) | 522 |
| HaeIII | GGCC | 1 cut(s) | 664 |
| HhaI | GCGC | 1 cut(s) | 656 |
| Hin1II | CATG | 1 cut(s) | 151 |
| Hin6I | GCGC | 1 cut(s) | 654 |
| HinP1I | GCGC | 1 cut(s) | 654 |
| HinfI | GANTC | 3 cut(s) | 4, 84, 596 |
| HphI | GGTGA | 2 cut(s) | 137, 436 |
| Hpy166II | GTNNAC | 1 cut(s) | 759 |
| Hpy188I | TCNGA | 1 cut(s) | 235 |
| Hpy188III | TCNNGA | 1 cut(s) | 731 |
| Hpy8I | GTNNAC | 1 cut(s) | 759 |
| Hpy99I | CGWCG | 1 cut(s) | 424 |
| HpyAV | CCTTC | 5 cut(s) | 116, 227, 496, 616, 707 |
| HpyCH4III | ACNGT | 5 cut(s) | 17, 259, 424, 446, 507 |
| HpyCH4IV | ACGT | 1 cut(s) | 428 |
| HpyCH4V | TGCA | 9 cut(s) | 133, 324, 336, 477, 494, 524, 636, 759, 777 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 211, 491, 638 |
| HpySE526I | ACGT | 1 cut(s) | 428 |
| Hsp92II | CATG | 1 cut(s) | 151 |
| HspAI | GCGC | 1 cut(s) | 654 |
| Ksp22I | TGATCA | 1 cut(s) | 355 |
| Kzo9I | GATC | 1 cut(s) | 355 |
| Lsp1109I | GCAGC | 1 cut(s) | 508 |
| MabI | ACCWGGT | 1 cut(s) | 703 |
| MaeI | CTAG | 2 cut(s) | 296, 809 |
| MaeII | ACGT | 1 cut(s) | 428 |
| MaeIII | GTNAC | 7 cut(s) | 17, 100, 181, 266, 424, 479, 683 |
| MalI | GATC | 1 cut(s) | 357 |
| MboI | GATC | 1 cut(s) | 355 |
| MboII | GAAGA | 2 cut(s) | 41, 314 |
| MfeI | CAATTG | 1 cut(s) | 43 |
| MhlI | GDGCHC | 1 cut(s) | 761 |
| MluCI | AATT | 7 cut(s) | 32, 43, 279, 511, 571, 802, 814 |
| MlyI | GAGTC | 2 cut(s) | 93, 590 |
| MmeI | TCCRAC | 2 cut(s) | 165, 411 |
| MnlI | CCTC | 2 cut(s) | 398, 612 |
| MroXI | GAANNNNTTC | 1 cut(s) | 626 |
| MseI | TTAA | 5 cut(s) | 80, 468, 530, 570, 767 |
| MslI | CAYNNNNRTG | 1 cut(s) | 732 |
| MspA1I | CMGCKG | 1 cut(s) | 563 |
| MspR9I | CCNGG | 2 cut(s) | 553, 705 |
| MunI | CAATTG | 1 cut(s) | 43 |
| MvaI | CCWGG | 2 cut(s) | 553, 705 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 211, 491, 638 |
| NdeI | CATATG | 1 cut(s) | 332 |
| NdeII | GATC | 1 cut(s) | 355 |
| NlaIII | CATG | 1 cut(s) | 151 |
| NmeAIII | GCCGAG | 1 cut(s) | 497 |
| NmuCI | GTSAC | 3 cut(s) | 181, 266, 424 |
| PaqCI | CACCTGC | 1 cut(s) | 639 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 425 |
| PdmI | GAANNNNTTC | 1 cut(s) | 626 |
| PkrI | GCNGC | 1 cut(s) | 523 |
| PleI | GAGTC | 2 cut(s) | 92, 590 |
| PpsI | GAGTC | 2 cut(s) | 92, 590 |
| Psp6I | CCWGG | 2 cut(s) | 551, 703 |
| PspGI | CCWGG | 2 cut(s) | 551, 703 |
| PspPI | GGNCC | 1 cut(s) | 662 |
| PstI | CTGCAG | 1 cut(s) | 479 |
| RseI | CAYNNNNRTG | 1 cut(s) | 732 |
| SaqAI | TTAA | 5 cut(s) | 80, 468, 530, 570, 767 |
| SatI | GCNGC | 1 cut(s) | 522 |
| Sau3AI | GATC | 1 cut(s) | 355 |
| Sau96I | GGNCC | 1 cut(s) | 662 |
| SchI | GAGTC | 2 cut(s) | 93, 590 |
| ScrFI | CCNGG | 2 cut(s) | 553, 705 |
| SduI | GDGCHC | 1 cut(s) | 761 |
| SetI | ASST | 9 cut(s) | 24, 127, 213, 252, 431, 613, 653, 685, 706 |
| SexAI | ACCWGGT | 1 cut(s) | 703 |
| SfcI | CTRYAG | 1 cut(s) | 475 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 732 |
| Sse9I | AATT | 7 cut(s) | 32, 43, 279, 511, 571, 802, 814 |
| SsiI | CCGC | 1 cut(s) | 563 |
| SspI | AATATT | 1 cut(s) | 362 |
| SspMI | CTAG | 2 cut(s) | 296, 809 |
| StyD4I | CCNGG | 2 cut(s) | 551, 703 |
| StyI | CCWWGG | 2 cut(s) | 295, 499 |
| TaaI | ACNGT | 5 cut(s) | 17, 259, 424, 446, 507 |
| TaiI | ACGT | 1 cut(s) | 431 |
| TaqI | TCGA | 2 cut(s) | 207, 312 |
| TasI | AATT | 7 cut(s) | 32, 43, 279, 511, 571, 802, 814 |
| Tru1I | TTAA | 5 cut(s) | 80, 468, 530, 570, 767 |
| Tru9I | TTAA | 5 cut(s) | 80, 468, 530, 570, 767 |
| TscAI | CASTG | 1 cut(s) | 382 |
| TseFI | GTSAC | 3 cut(s) | 181, 266, 424 |
| TseI | GCWGC | 1 cut(s) | 521 |
| Tsp45I | GTSAC | 3 cut(s) | 181, 266, 424 |
| TspDTI | ATGAA | 5 cut(s) | 135, 478, 621, 726, 804 |
| TspRI | CASTG | 1 cut(s) | 382 |
| VneI | GTGCAC | 1 cut(s) | 757 |
| XapI | RAATTY | 2 cut(s) | 32, 802 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 701 |
| XmaJI | CCTAGG | 1 cut(s) | 295 |
| XmnI | GAANNNNTTC | 1 cut(s) | 626 |
| XspI | CTAG | 2 cut(s) | 296, 809 |