Rroxscaffold_1G00026200

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000066
Physical Location & Seq
Reverse (-)
32953002 .. 32957837
4836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00026200.1

Sequence Viewer

Length: 1560 bp
ATGGCTGTGCACGGGAGGATGCTAGTTATGCAGCTGTTCATAGCGGTGGCCATAGCAGCAGCAGCAGCAGCTGATCGAACCCCACCTCCTCAAGCACTACCTGGCTGCCCCGACCACTGTGGTAATCTCACAATCCCATATCCTTTCGGCATCGGGGAGGGTTGTTTCCAGCGAGAATGGTTCAACCTCACATGTGACGAATCCGCCGAACCCCCAACAACACTCTTGGGCGATGGTGGTGTCACGGTTACTAACATATTGCTTGCTGAAGGTAAGTTGGAGATTTTGAATTACATAGCCTATGATTGTTATGATCAGCAGGGTAATCAAACAGAAGACATGTCCAATTCCCCTTCTCTCCGGTTGCATCCTTCTTTCACCATCTCCGGGACCAGAAACAAGTTTATTGCCGTTGGCTGCGACACTTATGCAATTTTCAAAGGGTACCGCCGTGACGAACATAGGTACATCACCGGATGCATGTCTGTATGTGACAGTCTTGACAGTGCAGTTAACGGTTCGTGCTCTGGCATTGGGTGTTGCGAAACTTCCATCCCTAGCGGACTCAAAAATCGCTCCATCAATTTGGATAGCTATTCTCAACACAAGGACGTGTGGGGCTTCAATCCATGCAGCTACGCTTTCATTGTGGAAGAAGGCAGGTTCACATTCAACCCTAATACAAGTTTTGAAGAACTCAACAACACTGACAAACTTCCCATGATTATTAACTGGGCTATTAATGAAGGGTCATGTGCTCTAGCTCAAAACAGGTCTGGTTATGCTTGCAAAGCAAATAGCAGCTGTGTCAATCGGACCGTCGATTACCAGACTGAACCGACTGGTTATTATTGCCAGTGCTTGCCAGGCTTCGAAGGGAACCCATATCTTCCAGATGGTTGCCAAGATATTGACGAGTGCATGGCTCCATCAAGTCCATGCAACAATGGAATATGCCAAAATTCACCTGGAGCTTATAGCTGTTTATGTAACAAAGGTTTCAGAAACCTGGACTCAAAGAATTGCATAGAAAACACTCCCGTGCCAAAGAACATGCCCCTGAAAATTTCGTTGGGTTTGAGCTTGAGCCTTGGACTCTTATTGTTGCTTATTGGTGTATGGTTTGGCTACAAACTCGTGAAGAAAAAGAATGAGATAAAACGAAAAAAGATGTTCTTCAAGAAAAATGGTGGTTTATTATTAGAACAACAATTATCGTCGGGTGAAGTTAATGTCGAGAAAATTAAATTGTTCAAATCACAAGAGTTAGAGAAGTCTACCGATAATTTTAATGTGGATAGAATTCTTGGCCAAGGAGGTCAAGGTACTGTATACAAAGCCATGTTGGATGATGGGAGAATTGTTGCTGTGAAGAAGTCTAAAATAGTTGATGAAAGCCAACTTTCAGAATTCATCAATGAGGTTGTCATTCTTTCCCAAATTAACCATAGAAATGTGGTTCAACTATTGGGTTGCTGTTTAGAGACGGAAGTTCCTCTTTTGGTTTATGAATTTATACCAAATGGAACTCTTTCCAAGTATATCACAGAGCAAGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK cEGF

Protein Analysis

519

Amino Acids

57.06

Weight (kDa)

5.39

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 36 - 95 4.3e-12 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 303 - 342 8.7e-09 Calcium-binding EGF domain
Pkinase PF00069 430 - 518 2.4e-14 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 432 - 518 1.5e-15 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 651
Acc65I GGTACC 1 cut(s) 444
AccB1I GGYRCC 1 cut(s) 444
AccI GTMKAC 2 cut(s) 1277, 1332
AciI CCGC 4 cut(s) 44, 204, 448, 561
AcoI YGGCCR 2 cut(s) 48, 1309
AcsI RAATTY 5 cut(s) 961, 1065, 1302, 1409, 1511
AcuI CTGAAG 1 cut(s) 288
AfaI GTAC 3 cut(s) 446, 467, 1327
AfiI CCNNNNNNNGG 1 cut(s) 387
AflIII ACRYGT 3 cut(s) 191, 339, 612
AgsI TTSAA 9 cut(s) 184, 289, 439, 625, 673, 692, 1180, 1255, 1463
AjiI CACGTC 1 cut(s) 613
AjnI CCWGG 4 cut(s) 100, 865, 967, 1008
AjuI GAANNNNNNNTTGG 2 cut(s) 1055, 1087
AleI CACNNNNGTG 1 cut(s) 1040
AloI GAACNNNNNNTCC 2 cut(s) 70, 102
AluBI AGCT 9 cut(s) 34, 71, 594, 636, 764, 804, 974, 981, 1083
AluI AGCT 9 cut(s) 34, 71, 594, 636, 764, 804, 974, 981, 1083
Alw21I GWGCWC 3 cut(s) 12, 527, 760
Alw26I GTCTC 1 cut(s) 1478
Alw44I GTGCAC 1 cut(s) 8
AlwNI CAGNNNCTG 1 cut(s) 71
AoxI GGCC 2 cut(s) 48, 1309
ApaLI GTGCAC 1 cut(s) 8
ApoI RAATTY 5 cut(s) 961, 1065, 1302, 1409, 1511
AseI ATTAAT 1 cut(s) 741
Asp700I GAANNNNTTC 1 cut(s) 1531
Asp718I GGTACC 1 cut(s) 444
AspS9I GGNCC 2 cut(s) 390, 816
AsuC2I CCSGG 1 cut(s) 388
AsuHPI GGTGA 4 cut(s) 370, 463, 957, 1235
AsuII TTCGAA 1 cut(s) 873
AvaII GGWCC 2 cut(s) 390, 816
BaeGI GKGCMC 1 cut(s) 12
BaeI ACNNNNGTAYC 2 cut(s) 436, 469
BalI TGGCCA 2 cut(s) 50, 1311
BanI GGYRCC 1 cut(s) 444
BauI CACGAG 1 cut(s) 1136
BbsI GAAGAC 1 cut(s) 342
Bbv12I GWGCWC 3 cut(s) 12, 527, 760
BccI CCATC 7 cut(s) 227, 389, 560, 587, 890, 937, 1346
BceAI ACGGC 2 cut(s) 395, 435
BcgI CGANNNNNNTGC 2 cut(s) 410, 444
BciT130I CCWGG 4 cut(s) 102, 867, 969, 1010
BclI TGATCA 1 cut(s) 313
BcnI CCSGG 1 cut(s) 388
BcoDI GTCTC 1 cut(s) 1478
BfaI CTAG 3 cut(s) 23, 558, 761
BfuAI ACCTGC 1 cut(s) 651
Bme1390I CCNGG 5 cut(s) 102, 388, 867, 969, 1010
Bme18I GGWCC 2 cut(s) 390, 816
BmgBI CACGTC 1 cut(s) 613
BmgT120I GGNCC 2 cut(s) 390, 816
BmiI GGNNCC 4 cut(s) 391, 446, 881, 927
BmrFI CCNGG 5 cut(s) 102, 388, 867, 969, 1010
BmrI ACTGGG 1 cut(s) 742
BmsI GCATC 4 cut(s) 9, 159, 376, 467
BmuI ACTGGG 1 cut(s) 742
BpiI GAAGAC 1 cut(s) 342
BpmI CTGGAG 1 cut(s) 990
Bpu14I TTCGAA 1 cut(s) 873
BpuEI CTTGAG 2 cut(s) 75, 1105
BpuMI CCSGG 1 cut(s) 388
BsaJI CCNNGG 2 cut(s) 1090, 1312
BsaWI WCCGGW 2 cut(s) 360, 473
BsaXI ACNNNNNCTCC 2 cut(s) 70, 100
Bsc4I CCNNNNNNNGG 1 cut(s) 387
Bse1I ACTGG 3 cut(s) 737, 847, 856
BseBI CCWGG 4 cut(s) 102, 867, 969, 1010
BseDI CCNNGG 2 cut(s) 1090, 1312
BseGI GGATG 5 cut(s) 24, 367, 482, 552, 1354
BseLI CCNNNNNNNGG 1 cut(s) 387
BseNI ACTGG 3 cut(s) 737, 847, 856
BseRI GAGGAG 1 cut(s) 78
BseSI GKGCMC 1 cut(s) 12
BsgI GTGCAG 1 cut(s) 528
BshFI GGCC 2 cut(s) 50, 1311
BshNI GGYRCC 1 cut(s) 444
BsiHKAI GWGCWC 3 cut(s) 12, 527, 760
BsiSI CCGG 3 cut(s) 361, 387, 474
BslFI GGGAC 1 cut(s) 403
BslI CCNNNNNNNGG 1 cut(s) 387
BsmAI GTCTC 1 cut(s) 1478
BsmBI CGTCTC 1 cut(s) 1478
BsmFI GGGAC 1 cut(s) 403
BsnI GGCC 2 cut(s) 50, 1311
Bsp119I TTCGAA 1 cut(s) 873
Bsp1286I GDGCHC 3 cut(s) 12, 527, 760
Bsp143I GATC 2 cut(s) 73, 313
BspACI CCGC 4 cut(s) 44, 204, 448, 561
BspANI GGCC 2 cut(s) 50, 1311
BspLI GGNNCC 4 cut(s) 391, 446, 881, 927
BspMI ACCTGC 1 cut(s) 651
BspT104I TTCGAA 1 cut(s) 873
BspT107I GGYRCC 1 cut(s) 444
BsrI ACTGG 3 cut(s) 737, 847, 856
BssECI CCNNGG 2 cut(s) 1090, 1312
BssMI GATC 2 cut(s) 73, 313
BssNAI GTATAC 1 cut(s) 1333
BssSI CACGAG 1 cut(s) 1136
BssT1I CCWWGG 2 cut(s) 1090, 1312
Bst1107I GTATAC 1 cut(s) 1333
Bst2BI CACGAG 1 cut(s) 1136
Bst2UI CCWGG 4 cut(s) 102, 867, 969, 1010
Bst4CI ACNGT 7 cut(s) 119, 247, 497, 506, 518, 820, 1330
BstBI TTCGAA 1 cut(s) 873
BstC8I GCNNGC 3 cut(s) 264, 787, 863
BstF5I GGATG 5 cut(s) 24, 367, 482, 552, 1354
BstKTI GATC 2 cut(s) 76, 316
BstMAI GTCTC 1 cut(s) 1478
BstMBI GATC 2 cut(s) 73, 313
BstMWI GCNNNNNNNGC 7 cut(s) 28, 56, 62, 65, 68, 791, 867
BstNI CCWGG 4 cut(s) 102, 867, 969, 1010
BstNSI RCATGY 4 cut(s) 195, 343, 484, 1057
BstSCI CCNGG 5 cut(s) 100, 386, 865, 967, 1008
BstSLI GKGCMC 1 cut(s) 12
BstV2I GAAGAC 1 cut(s) 342
BstXI CCANNNNNNTGG 1 cut(s) 586
BstZ17I GTATAC 1 cut(s) 1333
BsuRI GGCC 2 cut(s) 50, 1311
BtgZI GCGATG 1 cut(s) 246
BtrI CACGTC 1 cut(s) 613
BtsCI GGATG 5 cut(s) 24, 367, 482, 552, 1354
BtsIMutI CAGTG 4 cut(s) 115, 511, 705, 863
BveI ACCTGC 1 cut(s) 651
Cac8I GCNNGC 3 cut(s) 264, 787, 863
CaiI CAGNNNCTG 1 cut(s) 71
Cfr13I GGNCC 2 cut(s) 390, 816
CpoI CGGWCCG 1 cut(s) 816
Csp6I GTAC 3 cut(s) 445, 466, 1326
CspI CGGWCCG 1 cut(s) 816
CviQI GTAC 3 cut(s) 445, 466, 1326
DpnI GATC 2 cut(s) 75, 315
DpnII GATC 2 cut(s) 73, 313
EaeI YGGCCR 2 cut(s) 48, 1309
EciI GGCGGA 1 cut(s) 193
Eco130I CCWWGG 2 cut(s) 1090, 1312
Eco47I GGWCC 2 cut(s) 390, 816
Eco57I CTGAAG 1 cut(s) 288
EcoRI GAATTC 2 cut(s) 1302, 1409
EcoRII CCWGG 4 cut(s) 100, 865, 967, 1008
EcoT14I CCWWGG 2 cut(s) 1090, 1312
EcoT22I ATGCAT 1 cut(s) 482
ErhI CCWWGG 2 cut(s) 1090, 1312
Esp3I CGTCTC 1 cut(s) 1478
FalI AAGNNNNNCTT 4 cut(s) 1160, 1192, 1482, 1514
FaqI GGGAC 1 cut(s) 403
FbaI TGATCA 1 cut(s) 313
FblI GTMKAC 2 cut(s) 1277, 1332
FokI GGATG 5 cut(s) 31, 354, 489, 539, 1361
FspBI CTAG 3 cut(s) 23, 558, 761
GsuI CTGGAG 1 cut(s) 990
HaeIII GGCC 2 cut(s) 50, 1311
HapII CCGG 3 cut(s) 361, 387, 474
HincII GTYRAC 1 cut(s) 514
HindII GTYRAC 1 cut(s) 514
HinfI GANTC 4 cut(s) 200, 564, 1013, 1095
HpaI GTTAAC 1 cut(s) 514
HpaII CCGG 3 cut(s) 361, 387, 474
HphI GGTGA 4 cut(s) 370, 463, 957, 1235
Hpy166II GTNNAC 5 cut(s) 10, 514, 666, 1278, 1333
Hpy188I TCNGA 3 cut(s) 816, 1004, 1408
Hpy188III TCNNGA 5 cut(s) 500, 893, 1138, 1180, 1237
Hpy8I GTNNAC 5 cut(s) 10, 514, 666, 1278, 1333
Hpy99I CGWCG 2 cut(s) 824, 1222
HpyAV CCTTC 6 cut(s) 263, 363, 381, 650, 740, 869
HpyCH4III ACNGT 7 cut(s) 119, 247, 497, 506, 518, 820, 1330
HpyCH4IV ACGT 1 cut(s) 612
HpyF10VI GCNNNNNNNGC 7 cut(s) 28, 56, 62, 65, 68, 791, 867
HpySE526I ACGT 1 cut(s) 612
KpnI GGTACC 1 cut(s) 448
Ksp22I TGATCA 1 cut(s) 313
KspAI GTTAAC 1 cut(s) 514
Kzo9I GATC 2 cut(s) 73, 313
LmnI GCTCC 3 cut(s) 581, 931, 971
LweI GCATC 4 cut(s) 9, 159, 376, 467
MaeI CTAG 3 cut(s) 23, 558, 761
MaeII ACGT 1 cut(s) 612
MaeIII GTNAC 6 cut(s) 194, 241, 247, 452, 491, 989
MalI GATC 2 cut(s) 75, 315
MboI GATC 2 cut(s) 73, 313
MboII GAAGA 7 cut(s) 347, 665, 704, 881, 1153, 1168, 1384
MhlI GDGCHC 3 cut(s) 12, 527, 760
MlsI TGGCCA 2 cut(s) 50, 1311
MluNI TGGCCA 2 cut(s) 50, 1311
MlyI GAGTC 3 cut(s) 558, 1007, 1089
MmeI TCCRAC 2 cut(s) 258, 1326
MnlI CCTC 8 cut(s) 9, 96, 99, 151, 197, 1310, 1414, 1506
Mox20I TGGCCA 2 cut(s) 50, 1311
Mph1103I ATGCAT 1 cut(s) 482
MroXI GAANNNNTTC 1 cut(s) 1531
MscI TGGCCA 2 cut(s) 50, 1311
MseI TTAA 7 cut(s) 513, 729, 741, 1230, 1245, 1290, 1443
MslI CAYNNNNRTG 3 cut(s) 44, 1040, 1452
Msp20I TGGCCA 2 cut(s) 50, 1311
MspA1I CMGCKG 3 cut(s) 34, 71, 804
MspI CCGG 3 cut(s) 361, 387, 474
MspR9I CCNGG 5 cut(s) 102, 388, 867, 969, 1010
MvaI CCWGG 4 cut(s) 102, 867, 969, 1010
MwoI GCNNNNNNNGC 7 cut(s) 28, 56, 62, 65, 68, 791, 867
NciI CCSGG 1 cut(s) 388
NdeII GATC 2 cut(s) 73, 313
NlaIV GGNNCC 4 cut(s) 391, 446, 881, 927
NmuCI GTSAC 4 cut(s) 194, 241, 452, 491
NsiI ATGCAT 1 cut(s) 482
NspI RCATGY 4 cut(s) 195, 343, 484, 1057
NspV TTCGAA 1 cut(s) 873
OliI CACNNNNGTG 1 cut(s) 1040
PciI ACATGT 2 cut(s) 191, 339
PcsI WCGNNNNNNNCGW 1 cut(s) 204
PdmI GAANNNNTTC 1 cut(s) 1531
PfeI GAWTC 1 cut(s) 200
PfoI TCCNGGA 1 cut(s) 386
PleI GAGTC 3 cut(s) 558, 1007, 1089
PpsI GAGTC 3 cut(s) 558, 1007, 1089
PscI ACATGT 2 cut(s) 191, 339
PshBI ATTAAT 1 cut(s) 741
Psp6I CCWGG 4 cut(s) 100, 865, 967, 1008
PspGI CCWGG 4 cut(s) 100, 865, 967, 1008
PspN4I GGNNCC 4 cut(s) 391, 446, 881, 927
PspPI GGNCC 2 cut(s) 390, 816
PstNI CAGNNNCTG 1 cut(s) 71
PvuII CAGCTG 3 cut(s) 34, 71, 804
RsaI GTAC 3 cut(s) 446, 467, 1327
RsaNI GTAC 3 cut(s) 445, 466, 1326
RseI CAYNNNNRTG 3 cut(s) 44, 1040, 1452
Rsr2I CGGWCCG 1 cut(s) 816
RsrII CGGWCCG 1 cut(s) 816
SaqAI TTAA 7 cut(s) 513, 729, 741, 1230, 1245, 1290, 1443
Sau3AI GATC 2 cut(s) 73, 313
Sau96I GGNCC 2 cut(s) 390, 816
SchI GAGTC 3 cut(s) 558, 1007, 1089
ScrFI CCNGG 5 cut(s) 102, 388, 867, 969, 1010
SduI GDGCHC 3 cut(s) 12, 527, 760
SfaNI GCATC 4 cut(s) 9, 159, 376, 467
SfuI TTCGAA 1 cut(s) 873
SinI GGWCC 2 cut(s) 390, 816
SmiMI CAYNNNNRTG 3 cut(s) 44, 1040, 1452
SmlI CTYRAG 2 cut(s) 90, 1084
SmoI CTYRAG 2 cut(s) 90, 1084
SsiI CCGC 4 cut(s) 44, 204, 448, 561
SspMI CTAG 3 cut(s) 23, 558, 761
StyD4I CCNGG 5 cut(s) 100, 386, 865, 967, 1008
StyI CCWWGG 2 cut(s) 1090, 1312
TaaI ACNGT 7 cut(s) 119, 247, 497, 506, 518, 820, 1330
TaiI ACGT 1 cut(s) 615
TaqI TCGA 4 cut(s) 76, 822, 873, 1236
TfiI GAWTC 1 cut(s) 200
Tru1I TTAA 7 cut(s) 513, 729, 741, 1230, 1245, 1290, 1443
Tru9I TTAA 7 cut(s) 513, 729, 741, 1230, 1245, 1290, 1443
TscAI CASTG 4 cut(s) 122, 511, 712, 863
TseFI GTSAC 4 cut(s) 194, 241, 452, 491
Tsp45I GTSAC 4 cut(s) 194, 241, 452, 491
TspDTI ATGAA 6 cut(s) 28, 634, 759, 1402, 1407, 1524
TspGWI ACGGA 1 cut(s) 1502
TspRI CASTG 4 cut(s) 122, 511, 712, 863
VneI GTGCAC 1 cut(s) 8
VpaK11BI GGWCC 2 cut(s) 390, 816
VspI ATTAAT 1 cut(s) 741
XapI RAATTY 5 cut(s) 961, 1065, 1302, 1409, 1511
XceI RCATGY 4 cut(s) 195, 343, 484, 1057
XcmI CCANNNNNNNNNTGG 1 cut(s) 965
XmiI GTMKAC 2 cut(s) 1277, 1332
XmnI GAANNNNTTC 1 cut(s) 1531
XspI CTAG 3 cut(s) 23, 558, 761
Zsp2I ATGCAT 1 cut(s) 482
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.