Rorug05G0033100

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
2167516 .. 2169041
1526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0033100.1

Sequence Viewer

Length: 948 bp
ATGGCAATTAGAAACTCCATATTGAATGGAACTGCAGAACTGAAGGTGGCTTTACGAACTCAGCTTCAATACAAAACCTTGGGAAGAAACAGCAAGCATCATGGGGTAAACTTGCAAGCTGTATTACCAATCGGGCCAGATGGCAAGATTTCTGGTAAGAAGAAGAAAATCAAGCTAAAGCGCCATTTTGAAGGAATATATGCCCAGTTTGATAAAACCTCGTGTTGCAGAAGCAAAGGCCTAAGTCTAGCACAGATATCCAGCTTTTCAAGTGAACCTATGGGGCATAACCCTGCTCTGGAAGAAAAGAACATATCCAGTTCTAACTTCAGATTGCAAATGGCAATCTGTTCCTCATTATTCGGGAAAATGTGCGAAAGCGAAAACAAGCATTTCTATTTGTGTGTCTTAGAAATTTTTGCCCTTTTGGGTCTTCTGGCCTTAGTTCTTTGGCTAAGTTTACGCCCAAAGTCCCCATGTTATACCATTGTGGATATCACCATTCCAAATTCTGATATAGAGAATGGGGCACAGAATGGCTCTATTGTGTATGTTCTTGAGATTGAAAACTCTAACAAAGACTCCAGTATTTTTTATGATACCTCAGTCTTGACGTTCTATTATGGGCAGGATAAAGTTGCAGAGAAAACCATACCACCTTTTCATCAAGGAAGAAGCAAAACCCGTACGGTGATGGATGATATTGATGCCAATCCACAGGTGTGGAGAGCTGTTCGCAATTCAATATCGAATGCAACTGCAGAGTTGAAGGTGACTTTGCTAACTAAGATTAGATACAAAACATGGGGAATCAAGAGTAAACGTCACGGGCAAGACTTGCAAGGTGCGTTACCAATAGGTAAAGACGGCAAGCTTTCTGGTAAGAAGAAGAAAATCAAGCTAAGCCATGCTTCCAAGAAACTGAGGAGGAATAGTCTTAGATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

315

Amino Acids

35.23

Weight (kDa)

9.88

Isoelectric Point (pI)

41.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LEA_2 PF03168 186 - 276 8.2e-08 Late embryogenesis abundant protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 414, 508
AcuI CTGAAG 2 cut(s) 62, 313
AfaI GTAC 1 cut(s) 688
AfiI CCNNNNNNNGG 1 cut(s) 298
AgsI TTSAA 7 cut(s) 25, 68, 191, 270, 566, 744, 769
AleI CACNNNNGTG 1 cut(s) 721
AluBI AGCT 7 cut(s) 64, 119, 175, 264, 731, 874, 901
AluI AGCT 7 cut(s) 64, 119, 175, 264, 731, 874, 901
AoxI GGCC 3 cut(s) 134, 238, 438
ApoI RAATTY 2 cut(s) 414, 508
AspLEI GCGC 1 cut(s) 183
AspS9I GGNCC 1 cut(s) 134
AsuHPI GGTGA 3 cut(s) 490, 703, 784
BaeGI GKGCMC 1 cut(s) 532
BaeI ACNNNNGTAYC 2 cut(s) 591, 624
BauI CACGAG 1 cut(s) 220
BbsI GAAGAC 1 cut(s) 425
BccI CCATC 2 cut(s) 134, 688
BceAI ACGGC 1 cut(s) 883
BfaI CTAG 1 cut(s) 248
BfmI CTRYAG 2 cut(s) 33, 759
BfoI RGCGCY 1 cut(s) 184
BlpI GCTNAGC 1 cut(s) 902
BmgT120I GGNCC 1 cut(s) 134
BmrI ACTGGG 1 cut(s) 199
BmsI GCATC 2 cut(s) 106, 697
BmuI ACTGGG 1 cut(s) 199
BpiI GAAGAC 1 cut(s) 425
BpmI CTGGAG 1 cut(s) 568
Bpu1102I GCTNAGC 1 cut(s) 902
BpuEI CTTGAG 1 cut(s) 578
BsaBI GATNNNNATC 1 cut(s) 711
BsaJI CCNNGG 1 cut(s) 78
BsaXI ACNNNNNCTCC 3 cut(s) 566, 596, 919
Bsc4I CCNNNNNNNGG 1 cut(s) 298
Bse1I ACTGG 3 cut(s) 205, 318, 585
Bse8I GATNNNNATC 1 cut(s) 711
BseDI CCNNGG 1 cut(s) 78
BseGI GGATG 1 cut(s) 703
BseJI GATNNNNATC 1 cut(s) 711
BseLI CCNNNNNNNGG 1 cut(s) 298
BseMII CTCAG 3 cut(s) 74, 618, 914
BseNI ACTGG 3 cut(s) 205, 318, 585
BseRI GAGGAG 1 cut(s) 940
BseSI GKGCMC 1 cut(s) 532
BshFI GGCC 3 cut(s) 136, 240, 440
BsiWI CGTACG 1 cut(s) 686
BslFI GGGAC 1 cut(s) 457
BslI CCNNNNNNNGG 1 cut(s) 298
BsmFI GGGAC 1 cut(s) 457
BsmI GAATGC 1 cut(s) 757
BsnI GGCC 3 cut(s) 136, 240, 440
Bsp1286I GDGCHC 1 cut(s) 532
Bsp1720I GCTNAGC 1 cut(s) 902
BspANI GGCC 3 cut(s) 136, 240, 440
BspCNI CTCAG 3 cut(s) 73, 617, 915
BspMAI CTGCAG 2 cut(s) 37, 763
BsrI ACTGG 3 cut(s) 205, 318, 585
BssECI CCNNGG 1 cut(s) 78
BssSI CACGAG 1 cut(s) 220
BssT1I CCWWGG 1 cut(s) 78
Bst2BI CACGAG 1 cut(s) 220
Bst4CI ACNGT 1 cut(s) 691
BstAPI GCANNNNNTGC 1 cut(s) 838
BstC8I GCNNGC 3 cut(s) 95, 117, 872
BstF5I GGATG 1 cut(s) 703
BstH2I RGCGCY 1 cut(s) 184
BstHHI GCGC 1 cut(s) 183
BstMWI GCNNNNNNNGC 1 cut(s) 838
BstSFI CTRYAG 2 cut(s) 33, 759
BstSLI GKGCMC 1 cut(s) 532
BstV2I GAAGAC 1 cut(s) 425
BstXI CCANNNNNNTGG 1 cut(s) 723
BsuRI GGCC 3 cut(s) 136, 240, 440
BtsCI GGATG 1 cut(s) 703
Cac8I GCNNGC 3 cut(s) 95, 117, 872
CfoI GCGC 1 cut(s) 183
Cfr13I GGNCC 1 cut(s) 134
Csp6I GTAC 1 cut(s) 687
CviAII CATG 4 cut(s) 101, 477, 804, 908
CviQI GTAC 1 cut(s) 687
Eco130I CCWWGG 1 cut(s) 78
Eco147I AGGCCT 1 cut(s) 240
Eco32I GATATC 2 cut(s) 258, 496
Eco57I CTGAAG 2 cut(s) 62, 313
EcoRV GATATC 2 cut(s) 258, 496
EcoT14I CCWWGG 1 cut(s) 78
ErhI CCWWGG 1 cut(s) 78
FaeI CATG 4 cut(s) 104, 480, 807, 911
FalI AAGNNNNNCTT 2 cut(s) 895, 927
FaqI GGGAC 1 cut(s) 457
FatI CATG 4 cut(s) 100, 476, 803, 907
FokI GGATG 1 cut(s) 710
FspBI CTAG 1 cut(s) 248
GlaI GCGC 1 cut(s) 182
GsuI CTGGAG 1 cut(s) 568
HaeII RGCGCY 1 cut(s) 184
HaeIII GGCC 3 cut(s) 136, 240, 440
HhaI GCGC 1 cut(s) 183
Hin1II CATG 4 cut(s) 104, 480, 807, 911
Hin6I GCGC 1 cut(s) 181
HinP1I GCGC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 872
HinfI GANTC 2 cut(s) 581, 810
HphI GGTGA 3 cut(s) 490, 703, 784
Hpy166II GTNNAC 4 cut(s) 109, 275, 461, 821
Hpy188I TCNGA 2 cut(s) 332, 514
Hpy188III TCNNGA 5 cut(s) 299, 364, 557, 610, 814
Hpy8I GTNNAC 4 cut(s) 109, 275, 461, 821
HpyAV CCTTC 3 cut(s) 37, 185, 763
HpyCH4III ACNGT 1 cut(s) 691
HpyCH4IV ACGT 2 cut(s) 614, 823
HpyCH4V TGCA 8 cut(s) 35, 115, 228, 337, 641, 755, 761, 841
HpyF10VI GCNNNNNNNGC 1 cut(s) 838
HpySE526I ACGT 2 cut(s) 614, 823
Hsp92II CATG 4 cut(s) 104, 480, 807, 911
HspAI GCGC 1 cut(s) 181
LweI GCATC 2 cut(s) 106, 697
MaeI CTAG 1 cut(s) 248
MaeII ACGT 2 cut(s) 614, 823
MaeIII GTNAC 3 cut(s) 772, 824, 849
MboII GAAGA 8 cut(s) 96, 172, 175, 314, 425, 684, 898, 901
MhlI GDGCHC 1 cut(s) 532
MluCI AATT 4 cut(s) 6, 414, 508, 739
MlyI GAGTC 1 cut(s) 575
MnlI CCTC 5 cut(s) 229, 364, 613, 918, 921
MslI CAYNNNNRTG 1 cut(s) 721
Mva1269I GAATGC 1 cut(s) 757
MwoI GCNNNNNNNGC 1 cut(s) 838
NlaIII CATG 4 cut(s) 104, 480, 807, 911
NmuCI GTSAC 2 cut(s) 772, 824
OliI CACNNNNGTG 1 cut(s) 721
PceI AGGCCT 1 cut(s) 240
PctI GAATGC 1 cut(s) 757
PfeI GAWTC 1 cut(s) 810
Pfl23II CGTACG 1 cut(s) 686
PleI GAGTC 1 cut(s) 575
PpsI GAGTC 1 cut(s) 575
PspLI CGTACG 1 cut(s) 686
PspPI GGNCC 1 cut(s) 134
PstI CTGCAG 2 cut(s) 37, 763
RsaI GTAC 1 cut(s) 688
RsaNI GTAC 1 cut(s) 687
RseI CAYNNNNRTG 1 cut(s) 721
Sau96I GGNCC 1 cut(s) 134
SchI GAGTC 1 cut(s) 575
SduI GDGCHC 1 cut(s) 532
SfaNI GCATC 2 cut(s) 106, 697
SfcI CTRYAG 2 cut(s) 33, 759
SmiMI CAYNNNNRTG 1 cut(s) 721
SmlI CTYRAG 1 cut(s) 557
SmoI CTYRAG 1 cut(s) 557
Sse9I AATT 4 cut(s) 6, 414, 508, 739
SseBI AGGCCT 1 cut(s) 240
SspMI CTAG 1 cut(s) 248
StuI AGGCCT 1 cut(s) 240
StyI CCWWGG 1 cut(s) 78
TaaI ACNGT 1 cut(s) 691
TaiI ACGT 2 cut(s) 617, 826
TaqI TCGA 1 cut(s) 749
TasI AATT 4 cut(s) 6, 414, 508, 739
TfiI GAWTC 1 cut(s) 810
TseFI GTSAC 2 cut(s) 772, 824
Tsp45I GTSAC 2 cut(s) 772, 824
TspDTI ATGAA 1 cut(s) 653
XapI RAATTY 2 cut(s) 414, 508
XspI CTAG 1 cut(s) 248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.