RchiOBHm_Chr5g0017021

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
11712147 .. 11714476
2330 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29734

Sequence Viewer

Length: 1566 bp
ATGGTTCTTAATTGGGCAATTGGGGACGAGCCAGACCCATGTGATGTGGCTCAAATAAGGCAGGATTTCGTATGCAAGCAAAATAGCAAGTGTCTGAATCCCACAAATAGGAATGGTTACATTTGCCGGTGCTTGGAAGGTTATGAAGGGAACCCATACCACCCAGATGGGTGCCAAGATATTGATGAGTGCAAGGATCCAAATCTCTGCAACCACGGAGAGTGCAAAAATTTGGCGGGAAGTTACACTTGTTTGTGCTCAAAAGGATACAAGATCGACAGCATGAATGACAAGAGTTGCATCAAAGAGAATCCCAAAAATAACTCAAAGATGACTCTCCTGCTTATTATTTCATTGAGTGTAAGTATAGGCTTATTGATTTTTTTTGTGGGGATTTCGTGGATATGTTGCGGGATAAAGAGAAGACAATACACTAAACTCAAAGAAAAGTACTTCAAAGAGAATGGTGGCTTATCGTTACTACAACAACTTGCTAGTCATGGAGGCACTGTGGAGACAACAAAAATCTTTTCCACAGAAGAACTTGAGAAGGCAACAAACAATTACCACGAGAGTAGAATCCTTGGAGAAGGAGGCTATGGAACAGTTTACAAAGGAATACTACCAGATGACAAAGTGGTGGCCATAAAGAAGTCAAAAGGTGGTGCCCCAACCCAAAGTGATCAATTTGTTAACAAGGTGATTGTTCTTTCTCAAATAAACCACAGAAATTTGGTGAAGCTACTAGGTTGTTGTTTAGAGACAGAAGTGCCTTTACTAGTGTATGAGTTCATCACCCATGGAACTCTTTATGAGCATATTCATAAAAAAAGATCGTCACTGTCATTTGAATTACGAATGAAGATAGCAGTTGAAACGGTAGAAGCACTGGCATACTTACACTCCTCAACTTCAAATCCAATCATACATCGAGATGTGAAAGCAGAAAATATACTCTTAGATGATGCTTATACAGCAAAAATATCAGACTTTGGAGCTTCAAGATTGATTCCATCAGGTCAAACTGAAATACAAACTTTAGTGCTAGGGACATTCGGTTACCTAGACCCTGAATATCTGCAATCGAACCAACTAACAGAAAAGAGTGACATCTACAACTTTGGTGTTGTCCTAGTGGAGCTACTAACAAGCAAAATGGCACTTTCTAAGGACAGATGCTTAACAAGCATCTTTATTTCTTCCGTGGATGAAGATTGCTTGAATCCAATTCTTGATGATGACATTGTGAACGAGGGAAACATTGAGTCAGTAAAGAATGTGGCCAGTCTTGCAAAAAGATGCTTGAGGGTAAAAGGGGAGGAAAGGCCTACCATGAAAGAAGTAGCAATGGAGCTAGAGGGAATGAGGATTACAGCAAAGCACCCATGGGGAACTAATGTTGGTTTCTGTCCAGAGGAAAATGAGTACTTGCTTGGGTTACTTGATTCAGATGCTTATGTTTTGGATGTTAGAGGAGGTGGTGGTAGTTCTAGTGGTTTAACTACTGGTACAGGGTATGACAGCATGCAAATACAAATGTTAATGCCTTATGGTGATGGACGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

521

Amino Acids

57.77

Weight (kDa)

5.52

Isoelectric Point (pI)

33.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EGF_CA PF07645 60 - 100 4.4e-08 Calcium-binding EGF domain
Pkinase PF00069 189 - 448 6.5e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 192 - 452 7.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 171, 665
AciI CCGC 2 cut(s) 236, 411
AclWI GGATC 2 cut(s) 191, 204
AcoI YGGCCR 2 cut(s) 642, 1281
AcsI RAATTY 2 cut(s) 229, 730
AfaI GTAC 3 cut(s) 452, 1427, 1510
AfiI CCNNNNNNNGG 2 cut(s) 108, 133
AgsI TTSAA 6 cut(s) 457, 851, 875, 915, 1002, 1222
AhlI ACTAGT 1 cut(s) 778
AluBI AGCT 4 cut(s) 742, 998, 1141, 1354
AluI AGCT 4 cut(s) 742, 998, 1141, 1354
Alw21I GWGCWC 1 cut(s) 260
Alw26I GTCTC 2 cut(s) 509, 755
AlwI GGATC 2 cut(s) 191, 204
AoxI GGCC 3 cut(s) 642, 1281, 1325
ApoI RAATTY 2 cut(s) 229, 730
AsuHPI GGTGA 4 cut(s) 712, 748, 787, 1565
BaeGI GKGCMC 1 cut(s) 670
BalI TGGCCA 2 cut(s) 644, 1283
BamHI GGATCC 1 cut(s) 196
BanI GGYRCC 2 cut(s) 171, 665
BarI GAAGNNNNNNTAC 2 cut(s) 759, 791
BauI CACGAG 1 cut(s) 569
BbsI GAAGAC 1 cut(s) 430
Bbv12I GWGCWC 1 cut(s) 260
BccI CCATC 3 cut(s) 161, 1021, 1550
BciVI GTATCC 1 cut(s) 260
BclI TGATCA 1 cut(s) 682
BcoDI GTCTC 2 cut(s) 509, 755
BcuI ACTAGT 1 cut(s) 778
BfaI CTAG 8 cut(s) 495, 746, 779, 1046, 1064, 1133, 1355, 1491
BfuI GTATCC 1 cut(s) 260
BmcAI AGTACT 2 cut(s) 452, 1427
BmiI GGNNCC 4 cut(s) 152, 173, 198, 667
BmsI GCATC 6 cut(s) 309, 955, 1166, 1197, 1289, 1441
BpiI GAAGAC 1 cut(s) 430
BpuEI CTTGAG 2 cut(s) 566, 1324
BsaBI GATNNNNATC 1 cut(s) 201
BsaJI CCNNGG 5 cut(s) 214, 583, 799, 1203, 1385
BsaXI ACNNNNNCTCC 4 cut(s) 495, 525, 887, 917
Bsc4I CCNNNNNNNGG 2 cut(s) 108, 133
Bse118I RCCGGY 1 cut(s) 126
Bse1I ACTGG 3 cut(s) 894, 1284, 1510
Bse3DI GCAATG 1 cut(s) 1353
Bse8I GATNNNNATC 1 cut(s) 201
BseDI CCNNGG 5 cut(s) 214, 583, 799, 1203, 1385
BseGI GGATG 2 cut(s) 1213, 1471
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 2 cut(s) 108, 133
BseMI GCAATG 1 cut(s) 1353
BseNI ACTGG 3 cut(s) 894, 1284, 1510
BseRI GAGGAG 2 cut(s) 895, 1488
BseSI GKGCMC 1 cut(s) 670
BshFI GGCC 3 cut(s) 644, 1283, 1327
BshNI GGYRCC 2 cut(s) 171, 665
BsiHKAI GWGCWC 1 cut(s) 260
BsiSI CCGG 1 cut(s) 127
BslFI GGGAC 2 cut(s) 38, 1063
BslI CCNNNNNNNGG 2 cut(s) 108, 133
BsmAI GTCTC 2 cut(s) 509, 755
BsmFI GGGAC 2 cut(s) 38, 1063
BsnI GGCC 3 cut(s) 644, 1283, 1327
Bsp1286I GDGCHC 2 cut(s) 260, 670
Bsp143I GATC 4 cut(s) 196, 273, 682, 833
Bsp19I CCATGG 2 cut(s) 799, 1385
BspACI CCGC 2 cut(s) 236, 411
BspANI GGCC 3 cut(s) 644, 1283, 1327
BspLI GGNNCC 4 cut(s) 152, 173, 198, 667
BspPI GGATC 2 cut(s) 191, 204
BspT107I GGYRCC 2 cut(s) 171, 665
BsrDI GCAATG 1 cut(s) 1353
BsrFI RCCGGY 1 cut(s) 126
BsrI ACTGG 3 cut(s) 894, 1284, 1510
BssAI RCCGGY 1 cut(s) 126
BssECI CCNNGG 5 cut(s) 214, 583, 799, 1203, 1385
BssMI GATC 4 cut(s) 196, 273, 682, 833
BssSI CACGAG 1 cut(s) 569
BssT1I CCWWGG 3 cut(s) 583, 799, 1385
Bst2BI CACGAG 1 cut(s) 569
Bst4CI ACNGT 4 cut(s) 511, 607, 843, 880
BstC8I GCNNGC 2 cut(s) 77, 1526
BstDEI CTNAG 2 cut(s) 958, 1167
BstDSI CCRYGG 4 cut(s) 214, 799, 1203, 1385
BstEII GGTNACC 1 cut(s) 1058
BstF5I GGATG 2 cut(s) 1213, 1471
BstKTI GATC 4 cut(s) 199, 276, 685, 836
BstMAI GTCTC 2 cut(s) 509, 755
BstMBI GATC 4 cut(s) 196, 273, 682, 833
BstMWI GCNNNNNNNGC 3 cut(s) 974, 1185, 1289
BstNSI RCATGY 1 cut(s) 1528
BstPI GGTNACC 1 cut(s) 1058
BstSLI GKGCMC 1 cut(s) 670
BstV2I GAAGAC 1 cut(s) 430
BstX2I RGATCY 1 cut(s) 196
BstXI CCANNNNNNTGG 1 cut(s) 167
BstYI RGATCY 1 cut(s) 196
BsuI GTATCC 1 cut(s) 260
BsuRI GGCC 3 cut(s) 644, 1283, 1327
BtgI CCRYGG 4 cut(s) 214, 799, 1203, 1385
BtsCI GGATG 2 cut(s) 1213, 1471
BtsIMutI CAGTG 3 cut(s) 507, 839, 887
Cac8I GCNNGC 2 cut(s) 77, 1526
Cfr10I RCCGGY 1 cut(s) 126
Csp6I GTAC 3 cut(s) 451, 1426, 1509
CviAII CATG 7 cut(s) 39, 283, 500, 800, 1333, 1386, 1525
CviQI GTAC 3 cut(s) 451, 1426, 1509
DdeI CTNAG 2 cut(s) 958, 1167
DpnI GATC 4 cut(s) 198, 275, 684, 835
DpnII GATC 4 cut(s) 196, 273, 682, 833
EaeI YGGCCR 2 cut(s) 642, 1281
Eco130I CCWWGG 3 cut(s) 583, 799, 1385
Eco147I AGGCCT 1 cut(s) 1327
Eco91I GGTNACC 1 cut(s) 1058
EcoO65I GGTNACC 1 cut(s) 1058
EcoT14I CCWWGG 3 cut(s) 583, 799, 1385
ErhI CCWWGG 3 cut(s) 583, 799, 1385
FaeI CATG 7 cut(s) 42, 286, 503, 803, 1336, 1389, 1528
FalI AAGNNNNNCTT 2 cut(s) 232, 264
FaqI GGGAC 2 cut(s) 38, 1063
FatI CATG 7 cut(s) 38, 282, 499, 799, 1332, 1385, 1524
FauI CCCGC 2 cut(s) 229, 404
FbaI TGATCA 1 cut(s) 682
FokI GGATG 2 cut(s) 1220, 1478
FspBI CTAG 8 cut(s) 495, 746, 779, 1046, 1064, 1133, 1355, 1491
HaeIII GGCC 3 cut(s) 644, 1283, 1327
HapII CCGG 1 cut(s) 127
Hin1II CATG 7 cut(s) 42, 286, 503, 803, 1336, 1389, 1528
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HinfI GANTC 8 cut(s) 97, 310, 334, 579, 1009, 1222, 1265, 1445
HpaI GTTAAC 1 cut(s) 694
HpaII CCGG 1 cut(s) 127
HphI GGTGA 4 cut(s) 712, 748, 787, 1565
Hpy166II GTNNAC 3 cut(s) 610, 694, 1249
Hpy188I TCNGA 3 cut(s) 96, 988, 1450
Hpy188III TCNNGA 4 cut(s) 932, 1002, 1232, 1412
Hpy8I GTNNAC 3 cut(s) 610, 694, 1249
HpyAV CCTTC 4 cut(s) 131, 140, 544, 584
HpyCH4III ACNGT 4 cut(s) 511, 607, 843, 880
HpyCH4V TGCA 8 cut(s) 75, 192, 210, 225, 300, 1081, 1292, 1528
HpyF10VI GCNNNNNNNGC 3 cut(s) 974, 1185, 1289
HpyF3I CTNAG 2 cut(s) 958, 1167
Hsp92II CATG 7 cut(s) 42, 286, 503, 803, 1336, 1389, 1528
Ksp22I TGATCA 1 cut(s) 682
KspAI GTTAAC 1 cut(s) 694
Kzo9I GATC 4 cut(s) 196, 273, 682, 833
LmnI GCTCC 3 cut(s) 995, 1138, 1351
LweI GCATC 6 cut(s) 309, 955, 1166, 1197, 1289, 1441
MaeI CTAG 8 cut(s) 495, 746, 779, 1046, 1064, 1133, 1355, 1491
MaeIII GTNAC 7 cut(s) 116, 242, 477, 837, 1058, 1106, 1437
MalI GATC 4 cut(s) 198, 275, 684, 835
MboI GATC 4 cut(s) 196, 273, 682, 833
MboII GAAGA 5 cut(s) 435, 551, 874, 1191, 1223
MfeI CAATTG 1 cut(s) 18
MflI RGATCY 1 cut(s) 196
MhlI GDGCHC 2 cut(s) 260, 670
MlsI TGGCCA 2 cut(s) 644, 1283
MluCI AATT 8 cut(s) 10, 18, 229, 562, 686, 730, 851, 1227
MluNI TGGCCA 2 cut(s) 644, 1283
MlyI GAGTC 2 cut(s) 328, 1274
Mox20I TGGCCA 2 cut(s) 644, 1283
MscI TGGCCA 2 cut(s) 644, 1283
MseI TTAA 5 cut(s) 9, 693, 1181, 1499, 1541
MslI CAYNNNNRTG 2 cut(s) 165, 933
Msp20I TGGCCA 2 cut(s) 644, 1283
MspI CCGG 1 cut(s) 127
MunI CAATTG 1 cut(s) 18
MwoI GCNNNNNNNGC 3 cut(s) 974, 1185, 1289
NcoI CCATGG 2 cut(s) 799, 1385
NdeII GATC 4 cut(s) 196, 273, 682, 833
NlaIII CATG 7 cut(s) 42, 286, 503, 803, 1336, 1389, 1528
NlaIV GGNNCC 4 cut(s) 152, 173, 198, 667
NmuCI GTSAC 2 cut(s) 837, 1106
NspI RCATGY 1 cut(s) 1528
PaeI GCATGC 1 cut(s) 1528
PceI AGGCCT 1 cut(s) 1327
PfeI GAWTC 6 cut(s) 97, 310, 579, 1009, 1222, 1445
PleI GAGTC 2 cut(s) 328, 1273
PpsI GAGTC 2 cut(s) 328, 1273
PspEI GGTNACC 1 cut(s) 1058
PspN4I GGNNCC 4 cut(s) 152, 173, 198, 667
PsuI RGATCY 1 cut(s) 196
RsaI GTAC 3 cut(s) 452, 1427, 1510
RsaNI GTAC 3 cut(s) 451, 1426, 1509
RseI CAYNNNNRTG 2 cut(s) 165, 933
SaqAI TTAA 5 cut(s) 9, 693, 1181, 1499, 1541
Sau3AI GATC 4 cut(s) 196, 273, 682, 833
ScaI AGTACT 2 cut(s) 452, 1427
SchI GAGTC 2 cut(s) 328, 1274
SduI GDGCHC 2 cut(s) 260, 670
SfaNI GCATC 6 cut(s) 309, 955, 1166, 1197, 1289, 1441
SmiMI CAYNNNNRTG 2 cut(s) 165, 933
SmlI CTYRAG 2 cut(s) 545, 1303
SmoI CTYRAG 2 cut(s) 545, 1303
SpeI ACTAGT 1 cut(s) 778
SphI GCATGC 1 cut(s) 1528
Sse9I AATT 8 cut(s) 10, 18, 229, 562, 686, 730, 851, 1227
SseBI AGGCCT 1 cut(s) 1327
SsiI CCGC 2 cut(s) 236, 411
SspMI CTAG 8 cut(s) 495, 746, 779, 1046, 1064, 1133, 1355, 1491
StuI AGGCCT 1 cut(s) 1327
StyI CCWWGG 3 cut(s) 583, 799, 1385
TaaI ACNGT 4 cut(s) 511, 607, 843, 880
TaqI TCGA 3 cut(s) 276, 931, 1085
TasI AATT 8 cut(s) 10, 18, 229, 562, 686, 730, 851, 1227
TatI WGTACW 2 cut(s) 450, 1425
TfiI GAWTC 6 cut(s) 97, 310, 579, 1009, 1222, 1445
Tru1I TTAA 5 cut(s) 9, 693, 1181, 1499, 1541
Tru9I TTAA 5 cut(s) 9, 693, 1181, 1499, 1541
TscAI CASTG 3 cut(s) 514, 846, 894
TseFI GTSAC 2 cut(s) 837, 1106
Tsp45I GTSAC 2 cut(s) 837, 1106
TspDTI ATGAA 8 cut(s) 159, 299, 342, 781, 812, 875, 1224, 1349
TspGWI ACGGA 2 cut(s) 231, 1192
TspRI CASTG 3 cut(s) 514, 846, 894
XapI RAATTY 2 cut(s) 229, 730
XceI RCATGY 1 cut(s) 1528
XspI CTAG 8 cut(s) 495, 746, 779, 1046, 1064, 1133, 1355, 1491
ZrmI AGTACT 2 cut(s) 452, 1427
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.