Rmu_sc0003382.1_g000006

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003382.1
OG0000066
Physical Location & Seq
Forward (+)
46960 .. 51584
4625 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003382.1_g000006.1.cds

Sequence Viewer

Length: 1200 bp
atgaaaagaatgaagggcagcaaactcaggcagaagtactttagtcacaaagagggtatattgttacaacatcaattggccaatcatgaggcatatgctgagagaagaatgaaaatctttactttcaaagaacttcagaaggcaacaaataatttcgatccccataagaaaattggtcaaggagttcttggatcagtttaccaaggaatactaccagataaaacagtggttgccataaagaagttgaaagtagttaatgccgcaagaattgttaatgagacacgcaagcctttactggtttacgagtacttctccaatattggcactctttataaccacacatatgggagagaattaatgatcaccattttcattgcaactgcaaatgaaaatagctgtagaaaccgtacccggcgtaccgctgctgcactggcatacttgcactcctccacttccaagcccgtaatcatacacaaaaacgtgaagacaatgaacatactattagatgataaatacatggtaaaactgacagactccggattttcaccactccgggggcacattaaaatgcaaaggacactcggatacttagaccctgaatgtcttcattcaaacacaataacaggaaaaagcaacgtgtacagctttggagttgtcctagcggagctaataacaagcaggagggcagcttctccccataggcctgaggcagaaagaagcctggcacatgtctttgctagggcaattgagggcgacatcggggacttgcatgaaattctggatgaaaaaattcttgtgggagacatagaaatggtggaaaaagtggcagatttggcatatagatgcataagggaaagaggggaggaaagaccttccatgaaagaagtagccatggaagtacttgaggcattgcgaattatggccaagcatccagagggcatgcttagtttctctgagtctcccgaaaggacagagcactttgttacaccaccttcagacgcttacgttgttgatgttagaggtgaaggctttgatggcgtgccagcaccgcggggtgcagtcgttgggggcgttacccttgcttcgctggaagtaacagtggcggttgtgctcgcagtcggctcctggggagactgggactggaagtacggtcgccaggttgatctggtgaggctgacagtcgcctcgcgaggagactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

399

Amino Acids

44.75

Weight (kDa)

9.24

Isoelectric Point (pI)

37.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 333
AccII CGCG 2 cut(s) 1051, 1189
AccIII TCCGGA 1 cut(s) 536
AciI CCGC 6 cut(s) 261, 420, 662, 1049, 1051, 1103
AclWI GGATC 2 cut(s) 152, 199
AcoI YGGCCR 2 cut(s) 78, 921
AcsI RAATTY 2 cut(s) 774, 789
AcuI CTGAAG 2 cut(s) 119, 978
AfaI GTAC 7 cut(s) 38, 308, 409, 418, 641, 900, 1148
AfiI CCNNNNNNNGG 1 cut(s) 554
AflIII ACRYGT 2 cut(s) 636, 727
AgsI TTSAA 3 cut(s) 127, 247, 612
AjnI CCWGG 3 cut(s) 720, 1124, 1155
AluBI AGCT 4 cut(s) 396, 645, 667, 689
AluI AGCT 4 cut(s) 396, 645, 667, 689
Alw21I GWGCWC 2 cut(s) 978, 1113
Alw26I GTCTC 5 cut(s) 272, 795, 963, 1125, 1188
AlwI GGATC 2 cut(s) 152, 199
Aor13HI TCCGGA 1 cut(s) 536
AoxI GGCC 3 cut(s) 78, 701, 921
ApeKI GCWGC 4 cut(s) 18, 422, 425, 686
ApoI RAATTY 2 cut(s) 774, 789
AseI ATTAAT 1 cut(s) 356
Asp700I GAANNNNTTC 2 cut(s) 603, 789
AsuC2I CCSGG 2 cut(s) 412, 554
AsuHPI GGTGA 4 cut(s) 355, 537, 1034, 1180
AxyI CCTNAGG 1 cut(s) 705
BaeGI GKGCMC 1 cut(s) 561
BalI TGGCCA 2 cut(s) 80, 923
BbsI GAAGAC 2 cut(s) 491, 596
Bbv12I GWGCWC 2 cut(s) 978, 1113
BbvI GCAGC 4 cut(s) 30, 409, 412, 698
BccI CCATC 1 cut(s) 1028
BciT130I CCWGG 3 cut(s) 722, 1126, 1157
BciVI GTATCC 1 cut(s) 578
BclI TGATCA 1 cut(s) 360
BcnI CCSGG 2 cut(s) 412, 554
BcoDI GTCTC 5 cut(s) 272, 795, 963, 1125, 1188
BfaI CTAG 3 cut(s) 659, 738, 1198
BfmI CTRYAG 1 cut(s) 397
BfuI GTATCC 1 cut(s) 578
BisI GCNGC 5 cut(s) 19, 261, 423, 426, 687
BlsI GCNGC 5 cut(s) 20, 262, 424, 427, 688
BmcAI AGTACT 3 cut(s) 38, 308, 900
Bme1390I CCNGG 5 cut(s) 412, 554, 722, 1126, 1157
BmiI GGNNCC 1 cut(s) 1123
BmrFI CCNGG 5 cut(s) 412, 554, 722, 1126, 1157
BmrI ACTGGG 1 cut(s) 1144
BmsI GCATC 2 cut(s) 833, 937
BmuI ACTGGG 1 cut(s) 1144
BpiI GAAGAC 2 cut(s) 491, 596
BplI GAGNNNNNCTC 2 cut(s) 296, 328
BpuEI CTTGAG 1 cut(s) 923
BpuMI CCSGG 2 cut(s) 412, 554
BsaJI CCNNGG 5 cut(s) 202, 553, 891, 1049, 1125
BsaWI WCCGGW 1 cut(s) 536
BsaXI ACNNNNNCTCC 2 cut(s) 428, 458
Bsc4I CCNNNNNNNGG 1 cut(s) 554
Bse1I ACTGG 4 cut(s) 300, 435, 1139, 1145
Bse21I CCTNAGG 1 cut(s) 705
Bse3DI GCAATG 2 cut(s) 372, 908
BseAI TCCGGA 1 cut(s) 536
BseBI CCWGG 3 cut(s) 722, 1126, 1157
BseDI CCNNGG 5 cut(s) 202, 553, 891, 1049, 1125
BseGI GGATG 2 cut(s) 787, 928
BseLI CCNNNNNNNGG 1 cut(s) 554
BseMI GCAATG 2 cut(s) 372, 908
BseMII CTCAG 4 cut(s) 40, 90, 696, 945
BseNI ACTGG 4 cut(s) 300, 435, 1139, 1145
BseRI GAGGAG 1 cut(s) 436
BseSI GKGCMC 1 cut(s) 561
BseXI GCAGC 4 cut(s) 30, 409, 412, 698
BsgI GTGCAG 2 cut(s) 411, 1077
Bsh1236I CGCG 2 cut(s) 1051, 1189
Bsh1285I CGRYCG 1 cut(s) 1153
BshFI GGCC 3 cut(s) 80, 703, 923
BsiEI CGRYCG 1 cut(s) 1153
BsiHKAI GWGCWC 2 cut(s) 978, 1113
BsiSI CCGG 3 cut(s) 412, 537, 553
BslFI GGGAC 2 cut(s) 776, 1151
BslI CCNNNNNNNGG 1 cut(s) 554
BsmAI GTCTC 5 cut(s) 272, 795, 963, 1125, 1188
BsmFI GGGAC 2 cut(s) 776, 1151
BsnI GGCC 3 cut(s) 80, 703, 923
Bsp1286I GDGCHC 3 cut(s) 561, 978, 1113
Bsp13I TCCGGA 1 cut(s) 536
Bsp1407I TGTACA 1 cut(s) 639
Bsp143I GATC 4 cut(s) 157, 191, 360, 1162
Bsp19I CCATGG 1 cut(s) 891
Bsp68I TCGCGA 1 cut(s) 1189
BspACI CCGC 6 cut(s) 261, 420, 662, 1049, 1051, 1103
BspANI GGCC 3 cut(s) 80, 703, 923
BspCNI CTCAG 4 cut(s) 39, 91, 697, 946
BspEI TCCGGA 1 cut(s) 536
BspFNI CGCG 2 cut(s) 1051, 1189
BspHI TCATGA 1 cut(s) 85
BspLI GGNNCC 1 cut(s) 1123
BspPI GGATC 2 cut(s) 152, 199
BsrDI GCAATG 2 cut(s) 372, 908
BsrGI TGTACA 1 cut(s) 639
BsrI ACTGG 4 cut(s) 300, 435, 1139, 1145
BssECI CCNNGG 5 cut(s) 202, 553, 891, 1049, 1125
BssMI GATC 4 cut(s) 157, 191, 360, 1162
BssT1I CCWWGG 2 cut(s) 202, 891
Bst2UI CCWGG 3 cut(s) 722, 1126, 1157
Bst4CI ACNGT 5 cut(s) 226, 407, 1099, 1151, 1180
BstAUI TGTACA 1 cut(s) 639
BstC8I GCNNGC 5 cut(s) 287, 941, 1040, 1044, 1113
BstDEI CTNAG 6 cut(s) 26, 99, 589, 705, 944, 954
BstDSI CCRYGG 2 cut(s) 891, 1049
BstF5I GGATG 2 cut(s) 787, 928
BstFNI CGCG 2 cut(s) 1051, 1189
BstKTI GATC 4 cut(s) 160, 194, 363, 1165
BstMAI GTCTC 5 cut(s) 272, 795, 963, 1125, 1188
BstMBI GATC 4 cut(s) 157, 191, 360, 1162
BstMCI CGRYCG 1 cut(s) 1153
BstMWI GCNNNNNNNGC 4 cut(s) 431, 833, 1035, 1048
BstNI CCWGG 3 cut(s) 722, 1126, 1157
BstNSI RCATGY 2 cut(s) 731, 943
BstSCI CCNGG 5 cut(s) 410, 552, 720, 1124, 1155
BstSFI CTRYAG 1 cut(s) 397
BstSLI GKGCMC 1 cut(s) 561
BstUI CGCG 2 cut(s) 1051, 1189
BstV1I GCAGC 4 cut(s) 30, 409, 412, 698
BstV2I GAAGAC 2 cut(s) 491, 596
BstXI CCANNNNNNTGG 1 cut(s) 344
Bsu36I CCTNAGG 1 cut(s) 705
BsuI GTATCC 1 cut(s) 578
BsuRI GGCC 3 cut(s) 80, 703, 923
BtgI CCRYGG 2 cut(s) 891, 1049
BtsCI GGATG 2 cut(s) 787, 928
BtsIMutI CAGTG 3 cut(s) 231, 428, 1104
BtuMI TCGCGA 1 cut(s) 1189
Cac8I GCNNGC 5 cut(s) 287, 941, 1040, 1044, 1113
CciI TCATGA 1 cut(s) 85
Cfr42I CCGCGG 1 cut(s) 1052
CseI GACGC 1 cut(s) 1007
Csp6I GTAC 7 cut(s) 37, 307, 408, 417, 640, 899, 1147
CviAII CATG 7 cut(s) 86, 517, 728, 770, 877, 892, 940
CviQI GTAC 7 cut(s) 37, 307, 408, 417, 640, 899, 1147
DdeI CTNAG 6 cut(s) 26, 99, 589, 705, 944, 954
DpnI GATC 4 cut(s) 159, 193, 362, 1164
DpnII GATC 4 cut(s) 157, 191, 360, 1162
EaeI YGGCCR 2 cut(s) 78, 921
Eco130I CCWWGG 2 cut(s) 202, 891
Eco147I AGGCCT 1 cut(s) 703
Eco57I CTGAAG 2 cut(s) 119, 978
Eco81I CCTNAGG 1 cut(s) 705
EcoRII CCWGG 3 cut(s) 720, 1124, 1155
EcoT14I CCWWGG 2 cut(s) 202, 891
EcoT22I ATGCAT 1 cut(s) 848
ErhI CCWWGG 2 cut(s) 202, 891
FaeI CATG 7 cut(s) 89, 520, 731, 773, 880, 895, 943
FalI AAGNNNNNCTT 2 cut(s) 171, 203
FaqI GGGAC 2 cut(s) 776, 1151
FatI CATG 7 cut(s) 85, 516, 727, 769, 876, 891, 939
FauI CCCGC 1 cut(s) 1044
FauNDI CATATG 2 cut(s) 94, 343
FbaI TGATCA 1 cut(s) 360
Fnu4HI GCNGC 5 cut(s) 19, 261, 423, 426, 687
FokI GGATG 2 cut(s) 794, 915
Fsp4HI GCNGC 5 cut(s) 19, 261, 423, 426, 687
FspBI CTAG 3 cut(s) 659, 738, 1198
GluI GCNGC 5 cut(s) 19, 261, 423, 426, 687
HaeIII GGCC 3 cut(s) 80, 703, 923
HapII CCGG 3 cut(s) 412, 537, 553
HgaI GACGC 1 cut(s) 1007
Hin1II CATG 7 cut(s) 89, 520, 731, 773, 880, 895, 943
HinfI GANTC 2 cut(s) 533, 956
HpaII CCGG 3 cut(s) 412, 537, 553
HphI GGTGA 4 cut(s) 355, 537, 1034, 1180
Hpy166II GTNNAC 3 cut(s) 199, 301, 640
Hpy188I TCNGA 4 cut(s) 138, 584, 955, 997
Hpy188III TCNNGA 6 cut(s) 86, 537, 779, 932, 962, 1188
Hpy8I GTNNAC 3 cut(s) 199, 301, 640
HpyAV CCTTC 5 cut(s) 7, 133, 882, 1002, 1019
HpyCH4III ACNGT 5 cut(s) 226, 407, 1099, 1151, 1180
HpyCH4IV ACGT 3 cut(s) 480, 636, 1005
HpyCH4V TGCA 8 cut(s) 377, 383, 428, 442, 571, 769, 846, 1058
HpyF10VI GCNNNNNNNGC 4 cut(s) 431, 833, 1035, 1048
HpyF3I CTNAG 6 cut(s) 26, 99, 589, 705, 944, 954
HpySE526I ACGT 3 cut(s) 480, 636, 1005
Hsp92II CATG 7 cut(s) 89, 520, 731, 773, 880, 895, 943
Kpn2I TCCGGA 1 cut(s) 536
Ksp22I TGATCA 1 cut(s) 360
KspI CCGCGG 1 cut(s) 1052
Kzo9I GATC 4 cut(s) 157, 191, 360, 1162
LmnI GCTCC 2 cut(s) 664, 1127
Lsp1109I GCAGC 4 cut(s) 30, 409, 412, 698
LweI GCATC 2 cut(s) 833, 937
MaeI CTAG 3 cut(s) 659, 738, 1198
MaeII ACGT 3 cut(s) 480, 636, 1005
MaeIII GTNAC 5 cut(s) 44, 63, 982, 1072, 1093
MalI GATC 4 cut(s) 159, 193, 362, 1164
MboI GATC 4 cut(s) 157, 191, 360, 1162
MboII GAAGA 3 cut(s) 117, 496, 596
MfeI CAATTG 2 cut(s) 74, 744
MhlI GDGCHC 3 cut(s) 561, 978, 1113
MlsI TGGCCA 2 cut(s) 80, 923
MluCI AATT 9 cut(s) 74, 151, 171, 267, 353, 744, 774, 789, 915
MluNI TGGCCA 2 cut(s) 80, 923
MlyI GAGTC 2 cut(s) 527, 965
Mox20I TGGCCA 2 cut(s) 80, 923
Mph1103I ATGCAT 1 cut(s) 848
MroI TCCGGA 1 cut(s) 536
MroXI GAANNNNTTC 2 cut(s) 603, 789
MscI TGGCCA 2 cut(s) 80, 923
MseI TTAA 4 cut(s) 255, 273, 356, 564
MslI CAYNNNNRTG 4 cut(s) 342, 566, 809, 841
Msp20I TGGCCA 2 cut(s) 80, 923
MspA1I CMGCKG 2 cut(s) 422, 1051
MspI CCGG 3 cut(s) 412, 537, 553
MspR9I CCNGG 5 cut(s) 412, 554, 722, 1126, 1157
MunI CAATTG 2 cut(s) 74, 744
MvaI CCWGG 3 cut(s) 722, 1126, 1157
MvnI CGCG 2 cut(s) 1051, 1189
MwoI GCNNNNNNNGC 4 cut(s) 431, 833, 1035, 1048
NciI CCSGG 2 cut(s) 412, 554
NcoI CCATGG 1 cut(s) 891
NdeI CATATG 2 cut(s) 94, 343
NdeII GATC 4 cut(s) 157, 191, 360, 1162
NlaIII CATG 7 cut(s) 89, 520, 731, 773, 880, 895, 943
NlaIV GGNNCC 1 cut(s) 1123
NmuCI GTSAC 1 cut(s) 44
NruI TCGCGA 1 cut(s) 1189
NsiI ATGCAT 1 cut(s) 848
NspI RCATGY 2 cut(s) 731, 943
PaeI GCATGC 1 cut(s) 943
PagI TCATGA 1 cut(s) 85
PceI AGGCCT 1 cut(s) 703
PciI ACATGT 1 cut(s) 727
PcsI WCGNNNNNNNCGW 1 cut(s) 1068
PdmI GAANNNNTTC 2 cut(s) 603, 789
PkrI GCNGC 5 cut(s) 20, 262, 424, 427, 688
PleI GAGTC 2 cut(s) 527, 964
PpsI GAGTC 2 cut(s) 527, 964
PscI ACATGT 1 cut(s) 727
PshBI ATTAAT 1 cut(s) 356
PsiI TTATAA 1 cut(s) 333
Psp6I CCWGG 3 cut(s) 720, 1124, 1155
PspGI CCWGG 3 cut(s) 720, 1124, 1155
PspN4I GGNNCC 1 cut(s) 1123
RruI TCGCGA 1 cut(s) 1189
RsaI GTAC 7 cut(s) 38, 308, 409, 418, 641, 900, 1148
RsaNI GTAC 7 cut(s) 37, 307, 408, 417, 640, 899, 1147
RseI CAYNNNNRTG 4 cut(s) 342, 566, 809, 841
SacII CCGCGG 1 cut(s) 1052
SaqAI TTAA 4 cut(s) 255, 273, 356, 564
SatI GCNGC 5 cut(s) 19, 261, 423, 426, 687
Sau3AI GATC 4 cut(s) 157, 191, 360, 1162
ScaI AGTACT 3 cut(s) 38, 308, 900
SchI GAGTC 2 cut(s) 527, 965
ScrFI CCNGG 5 cut(s) 412, 554, 722, 1126, 1157
SduI GDGCHC 3 cut(s) 561, 978, 1113
SfaNI GCATC 2 cut(s) 833, 937
SfcI CTRYAG 1 cut(s) 397
Sfr303I CCGCGG 1 cut(s) 1052
SgrBI CCGCGG 1 cut(s) 1052
SmiMI CAYNNNNRTG 4 cut(s) 342, 566, 809, 841
SmlI CTYRAG 1 cut(s) 902
SmoI CTYRAG 1 cut(s) 902
SphI GCATGC 1 cut(s) 943
Sse9I AATT 9 cut(s) 74, 151, 171, 267, 353, 744, 774, 789, 915
SseBI AGGCCT 1 cut(s) 703
SsiI CCGC 6 cut(s) 261, 420, 662, 1049, 1051, 1103
SspI AATATT 1 cut(s) 319
SspMI CTAG 3 cut(s) 659, 738, 1198
StuI AGGCCT 1 cut(s) 703
StyD4I CCNGG 5 cut(s) 410, 552, 720, 1124, 1155
StyI CCWWGG 2 cut(s) 202, 891
TaaI ACNGT 5 cut(s) 226, 407, 1099, 1151, 1180
TaiI ACGT 3 cut(s) 483, 639, 1008
TaqI TCGA 1 cut(s) 156
TasI AATT 9 cut(s) 74, 151, 171, 267, 353, 744, 774, 789, 915
TatI WGTACW 4 cut(s) 36, 306, 639, 898
TauI GCSGC 1 cut(s) 263
Tru1I TTAA 4 cut(s) 255, 273, 356, 564
Tru9I TTAA 4 cut(s) 255, 273, 356, 564
TscAI CASTG 3 cut(s) 231, 435, 1104
TseFI GTSAC 1 cut(s) 44
TseI GCWGC 4 cut(s) 18, 422, 425, 686
Tsp45I GTSAC 1 cut(s) 44
TspRI CASTG 3 cut(s) 231, 435, 1104
VspI ATTAAT 1 cut(s) 356
XapI RAATTY 2 cut(s) 774, 789
XceI RCATGY 2 cut(s) 731, 943
XcmI CCANNNNNNNNNTGG 1 cut(s) 170
XmnI GAANNNNTTC 2 cut(s) 603, 789
XspI CTAG 3 cut(s) 659, 738, 1198
ZrmI AGTACT 3 cut(s) 38, 308, 900
Zsp2I ATGCAT 1 cut(s) 848
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.