Rorug05G0033900

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
2351317 .. 2353011
1695 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0033900.1

Sequence Viewer

Length: 1179 bp
ATGAGTTCCTCAAGATTGCTTTTCTTCATGCTAATTCCTATTATCTTGGACCTTGTTGCTCCTGCCACAGTGCAAATTGATGACGGTGTATGTACTTTCACAGCTGATTTCTGCTGGAGATGTTCCAGCATTGGCACCTACACTGATGGCAGCATCTACCAAGAAAACCTCAACAACCTCCTGTCCAACTTCTCTTCCAACACCCAAATCAATTACGGGTTTTACAATTCTTCCATGGGACAGGACCCCAACAAGGTTAATGCAATTGCGTTGTGTAGAGGAGATATCGCACTGGACATGTGCCATACTTGTGTGACTGAGGCCAGTCAACTTCTCTTCCAGAATTGCTCACATCAAAAGGAAGCGATCCTATGGGCTCAGCCTTGTATGGTACGGTACTCGAGCAAGTTAATATTTGATATTCAGGAAGATGAACCTATCAAGTATGTCCCTAGCCCTACCGATGCAGCGAACATAGAACAGTTTACACCACTGCTAAATTCCTTGTTGGATACCTTAAGTGAGAAAGCGGCATCAGGGGACTCTCTCAAAAAATATGCAGCAGGACATACAACTCTCCAAGTTGTTCCAAAATATCAAGCAATATATGGACTTGTTCAGTGCACTCCAGATATGGACAAGAACAATTGCAGCAATTGCCTTCAAGATGCTATCTCAAAAATTCCAACATGTTGTGGTGGAAAGCAAGGAGGAAGAGTTCTTAAACCCAGCTGCAGTGTAAGGTTTGAGGCCACTCTTTTCTACGAGTCTACAGCCGATTCGGAAGTGAGTCTTCCACCAATAAAAGGAAAGAAGGGGAACGAGTCAAAAACTACCATGATCATCATCATTGTGGCCGTGATTGCTTTTATCCTCACACTTCTCGTCAGCATATGCATTTTTTTTAGAGCAAAGAAGCGAAATCTTGAAAATGATAATTCCGGTGAAATTAGTTTGGCAGATTCATTGCAATATGACTTTGAAACTATTAGAGATGCAACAGATGACTTCTCTGATGAAAATAAGCTTGGACAAGGTGGATTTGGAGCTGTTTATAAGGGTCGTCTAGCTAATGGACAGGATATAGCTGTCAAAAGGCTCTCTAAGAATTCTGAACAGGGTGACCAAGAGTTCAAAAATGAGGTCACATTAGTTGCTCAACTTCAACATCGGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

392

Amino Acids

43.19

Weight (kDa)

5.1

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 40 - 135 3.1e-24 Salt stress response/antifungal
Stress-antifung PF01657 159 - 251 3.7e-13 Salt stress response/antifungal
Pkinase PF00069 338 - 392 1.3e-06 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 340 - 392 1.8e-06 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1056
AccB1I GGYRCC 1 cut(s) 134
AccI GTMKAC 1 cut(s) 770
AciI CCGC 1 cut(s) 530
AclWI GGATC 1 cut(s) 361
AcoI YGGCCR 1 cut(s) 855
AcsI RAATTY 3 cut(s) 499, 681, 1108
AfaI GTAC 3 cut(s) 94, 393, 398
AfiI CCNNNNNNNGG 2 cut(s) 253, 806
AflII CTTAAG 1 cut(s) 517
AflIII ACRYGT 2 cut(s) 297, 689
AgsI TTSAA 5 cut(s) 665, 929, 983, 1135, 1166
AjuI GAANNNNNNNTTGG 2 cut(s) 1011, 1043
AloI GAACNNNNNNTCC 2 cut(s) 702, 734
AluBI AGCT 6 cut(s) 104, 732, 1027, 1049, 1070, 1088
AluI AGCT 6 cut(s) 104, 732, 1027, 1049, 1070, 1088
Alw21I GWGCWC 1 cut(s) 626
Alw44I GTGCAC 1 cut(s) 622
AlwI GGATC 1 cut(s) 361
Ama87I CYCGRG 1 cut(s) 400
AoxI GGCC 3 cut(s) 321, 750, 855
ApaLI GTGCAC 1 cut(s) 622
ApeKI GCWGC 5 cut(s) 150, 467, 560, 651, 732
ApoI RAATTY 3 cut(s) 499, 681, 1108
ArsI GACNNNNNNTTYG 2 cut(s) 1128, 1160
AspS9I GGNCC 2 cut(s) 49, 244
AsuHPI GGTGA 2 cut(s) 956, 1133
AvaI CYCGRG 1 cut(s) 400
AvaII GGWCC 2 cut(s) 49, 244
BaeGI GKGCMC 1 cut(s) 626
BanI GGYRCC 1 cut(s) 134
BanII GRGCYC 1 cut(s) 379
BbsI GAAGAC 1 cut(s) 785
Bbv12I GWGCWC 1 cut(s) 626
BbvI GCAGC 5 cut(s) 162, 479, 572, 663, 719
BccI CCATC 1 cut(s) 140
BceAI ACGGC 1 cut(s) 842
BciVI GTATCC 1 cut(s) 505
BclI TGATCA 1 cut(s) 840
BfaI CTAG 2 cut(s) 453, 1067
BfmI CTRYAG 2 cut(s) 733, 771
BfrI CTTAAG 1 cut(s) 517
BfuI GTATCC 1 cut(s) 505
BisI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
BlpI GCTNAGC 1 cut(s) 378
BlsI GCNGC 6 cut(s) 152, 469, 532, 562, 653, 734
Bme18I GGWCC 2 cut(s) 49, 244
BmeT110I CYCGRG 1 cut(s) 400
BmgT120I GGNCC 2 cut(s) 49, 244
BmiI GGNNCC 2 cut(s) 136, 246
BmsI GCATC 5 cut(s) 162, 454, 542, 658, 985
BpiI GAAGAC 1 cut(s) 785
BpmI CTGGAG 2 cut(s) 136, 612
Bpu1102I GCTNAGC 1 cut(s) 378
BsaBI GATNNNNATC 1 cut(s) 845
BsaJI CCNNGG 1 cut(s) 234
BsaWI WCCGGW 1 cut(s) 941
BsaXI ACNNNNNCTCC 2 cut(s) 702, 732
Bsc4I CCNNNNNNNGG 2 cut(s) 253, 806
Bse1I ACTGG 2 cut(s) 297, 324
Bse3DI GCAATG 1 cut(s) 965
Bse8I GATNNNNATC 1 cut(s) 845
BseDI CCNNGG 1 cut(s) 234
BseJI GATNNNNATC 1 cut(s) 845
BseLI CCNNNNNNNGG 2 cut(s) 253, 806
BseMI GCAATG 1 cut(s) 965
BseMII CTCAG 2 cut(s) 309, 392
BseNI ACTGG 2 cut(s) 297, 324
BseRI GAGGAG 1 cut(s) 294
BseSI GKGCMC 1 cut(s) 626
BseXI GCAGC 5 cut(s) 162, 479, 572, 663, 719
BseYI CCCAGC 1 cut(s) 728
BshFI GGCC 3 cut(s) 323, 752, 857
BshNI GGYRCC 1 cut(s) 134
BsiHKAI GWGCWC 1 cut(s) 626
BsiHKCI CYCGRG 1 cut(s) 400
BsiSI CCGG 1 cut(s) 942
BslFI GGGAC 3 cut(s) 252, 434, 554
BslI CCNNNNNNNGG 2 cut(s) 253, 806
BsmFI GGGAC 3 cut(s) 252, 434, 554
BsnI GGCC 3 cut(s) 323, 752, 857
BsoBI CYCGRG 1 cut(s) 400
Bsp1286I GDGCHC 2 cut(s) 379, 626
Bsp143I GATC 2 cut(s) 366, 840
Bsp1720I GCTNAGC 1 cut(s) 378
Bsp19I CCATGG 1 cut(s) 234
BspACI CCGC 1 cut(s) 530
BspANI GGCC 3 cut(s) 323, 752, 857
BspCNI CTCAG 2 cut(s) 310, 391
BspLI GGNNCC 2 cut(s) 136, 246
BspMAI CTGCAG 1 cut(s) 737
BspPI GGATC 1 cut(s) 361
BspT107I GGYRCC 1 cut(s) 134
BspTI CTTAAG 1 cut(s) 517
BsrDI GCAATG 1 cut(s) 965
BsrI ACTGG 2 cut(s) 297, 324
BssECI CCNNGG 1 cut(s) 234
BssMI GATC 2 cut(s) 366, 840
BssT1I CCWWGG 1 cut(s) 234
Bst4CI ACNGT 4 cut(s) 70, 86, 396, 483
Bst6I CTCTTC 3 cut(s) 199, 341, 709
BstAFI CTTAAG 1 cut(s) 517
BstAPI GCANNNNNTGC 1 cut(s) 657
BstDEI CTNAG 3 cut(s) 318, 378, 1104
BstDSI CCRYGG 1 cut(s) 234
BstEII GGTNACC 1 cut(s) 1121
BstKTI GATC 2 cut(s) 369, 843
BstMBI GATC 2 cut(s) 366, 840
BstMWI GCNNNNNNNGC 2 cut(s) 657, 863
BstNSI RCATGY 2 cut(s) 301, 693
BstPI GGTNACC 1 cut(s) 1121
BstSFI CTRYAG 2 cut(s) 733, 771
BstSLI GKGCMC 1 cut(s) 626
BstV1I GCAGC 5 cut(s) 162, 479, 572, 663, 719
BstV2I GAAGAC 1 cut(s) 785
BsuI GTATCC 1 cut(s) 505
BsuRI GGCC 3 cut(s) 323, 752, 857
BtgI CCRYGG 1 cut(s) 234
BtsI GCAGTG 2 cut(s) 491, 742
BtsIMutI CAGTG 6 cut(s) 75, 141, 290, 491, 626, 742
Cfr13I GGNCC 2 cut(s) 49, 244
Csp6I GTAC 3 cut(s) 93, 392, 397
CviAII CATG 5 cut(s) 28, 235, 298, 690, 838
CviQI GTAC 3 cut(s) 93, 392, 397
DdeI CTNAG 3 cut(s) 318, 378, 1104
DpnI GATC 2 cut(s) 368, 842
DpnII GATC 2 cut(s) 366, 840
EaeI YGGCCR 1 cut(s) 855
Eam1104I CTCTTC 3 cut(s) 199, 341, 709
EarI CTCTTC 3 cut(s) 199, 341, 709
Eco130I CCWWGG 1 cut(s) 234
Eco24I GRGCYC 1 cut(s) 379
Eco32I GATATC 1 cut(s) 286
Eco47I GGWCC 2 cut(s) 49, 244
Eco88I CYCGRG 1 cut(s) 400
Eco91I GGTNACC 1 cut(s) 1121
EcoO109I RGGNCCY 1 cut(s) 244
EcoO65I GGTNACC 1 cut(s) 1121
EcoRI GAATTC 1 cut(s) 1108
EcoRV GATATC 1 cut(s) 286
EcoT14I CCWWGG 1 cut(s) 234
EcoT22I ATGCAT 1 cut(s) 899
EcoT38I GRGCYC 1 cut(s) 379
ErhI CCWWGG 1 cut(s) 234
FaeI CATG 5 cut(s) 31, 238, 301, 693, 841
FalI AAGNNNNNCTT 2 cut(s) 777, 809
FaqI GGGAC 3 cut(s) 252, 434, 554
FatI CATG 5 cut(s) 27, 234, 297, 689, 837
FauNDI CATATG 1 cut(s) 893
FbaI TGATCA 1 cut(s) 840
FblI GTMKAC 1 cut(s) 770
Fnu4HI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
FriOI GRGCYC 1 cut(s) 379
Fsp4HI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
FspBI CTAG 2 cut(s) 453, 1067
GluI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 2 cut(s) 136, 612
HaeIII GGCC 3 cut(s) 323, 752, 857
HapII CCGG 1 cut(s) 942
Hin1II CATG 5 cut(s) 31, 238, 301, 693, 841
HincII GTYRAC 1 cut(s) 329
HindII GTYRAC 1 cut(s) 329
HindIII AAGCTT 1 cut(s) 1025
HinfI GANTC 6 cut(s) 542, 767, 779, 790, 824, 962
HpaII CCGG 1 cut(s) 942
HphI GGTGA 2 cut(s) 956, 1133
Hpy166II GTNNAC 4 cut(s) 329, 486, 624, 771
Hpy188I TCNGA 4 cut(s) 784, 1015, 1114, 1173
Hpy188III TCNNGA 6 cut(s) 12, 340, 425, 629, 665, 926
Hpy8I GTNNAC 4 cut(s) 329, 486, 624, 771
HpyAV CCTTC 2 cut(s) 671, 808
HpyCH4III ACNGT 4 cut(s) 70, 86, 396, 483
HpyF10VI GCNNNNNNNGC 2 cut(s) 657, 863
HpyF3I CTNAG 3 cut(s) 318, 378, 1104
Hsp92II CATG 5 cut(s) 31, 238, 301, 693, 841
Ksp22I TGATCA 1 cut(s) 840
Kzo9I GATC 2 cut(s) 366, 840
LmnI GCTCC 2 cut(s) 64, 1046
Lsp1109I GCAGC 5 cut(s) 162, 479, 572, 663, 719
LweI GCATC 5 cut(s) 162, 454, 542, 658, 985
MaeI CTAG 2 cut(s) 453, 1067
MaeIII GTNAC 3 cut(s) 313, 1121, 1144
MalI GATC 2 cut(s) 368, 842
MboI GATC 2 cut(s) 366, 840
MboII GAAGA 7 cut(s) 16, 186, 222, 328, 440, 726, 785
MfeI CAATTG 3 cut(s) 264, 646, 655
MhlI GDGCHC 2 cut(s) 379, 626
MlyI GAGTC 4 cut(s) 536, 776, 799, 833
MmeI TCCRAC 4 cut(s) 210, 222, 489, 710
MnlI CCTC 9 cut(s) 19, 179, 188, 272, 313, 704, 742, 884, 1135
Mph1103I ATGCAT 1 cut(s) 899
MseI TTAA 5 cut(s) 258, 410, 518, 723, 1177
MslI CAYNNNNRTG 2 cut(s) 309, 851
MspA1I CMGCKG 2 cut(s) 104, 732
MspCI CTTAAG 1 cut(s) 517
MspI CCGG 1 cut(s) 942
MunI CAATTG 3 cut(s) 264, 646, 655
MwoI GCNNNNNNNGC 2 cut(s) 657, 863
NcoI CCATGG 1 cut(s) 234
NdeI CATATG 1 cut(s) 893
NdeII GATC 2 cut(s) 366, 840
NlaIII CATG 5 cut(s) 31, 238, 301, 693, 841
NlaIV GGNNCC 2 cut(s) 136, 246
NmuCI GTSAC 3 cut(s) 313, 1121, 1144
NsiI ATGCAT 1 cut(s) 899
NspI RCATGY 2 cut(s) 301, 693
PaeR7I CTCGAG 1 cut(s) 400
PciI ACATGT 2 cut(s) 297, 689
PfeI GAWTC 2 cut(s) 779, 962
PkrI GCNGC 6 cut(s) 152, 469, 532, 562, 653, 734
PleI GAGTC 4 cut(s) 536, 775, 798, 832
PpsI GAGTC 4 cut(s) 536, 775, 798, 832
PpuMI RGGWCCY 1 cut(s) 244
PscI ACATGT 2 cut(s) 297, 689
PsiI TTATAA 1 cut(s) 1056
Psp5II RGGWCCY 1 cut(s) 244
PspEI GGTNACC 1 cut(s) 1121
PspFI CCCAGC 1 cut(s) 728
PspN4I GGNNCC 2 cut(s) 136, 246
PspPI GGNCC 2 cut(s) 49, 244
PspPPI RGGWCCY 1 cut(s) 244
PspXI VCTCGAGB 1 cut(s) 400
PstI CTGCAG 1 cut(s) 737
PvuII CAGCTG 2 cut(s) 104, 732
RsaI GTAC 3 cut(s) 94, 393, 398
RsaNI GTAC 3 cut(s) 93, 392, 397
RseI CAYNNNNRTG 2 cut(s) 309, 851
SaqAI TTAA 5 cut(s) 258, 410, 518, 723, 1177
SatI GCNGC 6 cut(s) 151, 468, 531, 561, 652, 733
Sau3AI GATC 2 cut(s) 366, 840
Sau96I GGNCC 2 cut(s) 49, 244
SchI GAGTC 4 cut(s) 536, 776, 799, 833
SduI GDGCHC 2 cut(s) 379, 626
SfaNI GCATC 5 cut(s) 162, 454, 542, 658, 985
SfcI CTRYAG 2 cut(s) 733, 771
Sfr274I CTCGAG 1 cut(s) 400
SinI GGWCC 2 cut(s) 49, 244
SlaI CTCGAG 1 cut(s) 400
SmiMI CAYNNNNRTG 2 cut(s) 309, 851
SmlI CTYRAG 3 cut(s) 10, 400, 517
SmoI CTYRAG 3 cut(s) 10, 400, 517
SsiI CCGC 1 cut(s) 530
SspI AATATT 1 cut(s) 414
SspMI CTAG 2 cut(s) 453, 1067
StyI CCWWGG 1 cut(s) 234
TaaI ACNGT 4 cut(s) 70, 86, 396, 483
TaqI TCGA 1 cut(s) 401
TatI WGTACW 1 cut(s) 92
TauI GCSGC 1 cut(s) 533
TfiI GAWTC 2 cut(s) 779, 962
Tru1I TTAA 5 cut(s) 258, 410, 518, 723, 1177
Tru9I TTAA 5 cut(s) 258, 410, 518, 723, 1177
TscAI CASTG 6 cut(s) 75, 148, 297, 498, 626, 742
TseFI GTSAC 3 cut(s) 313, 1121, 1144
TseI GCWGC 5 cut(s) 150, 467, 560, 651, 732
Tsp45I GTSAC 3 cut(s) 313, 1121, 1144
TspDTI ATGAA 4 cut(s) 16, 447, 954, 1032
TspRI CASTG 6 cut(s) 75, 148, 297, 498, 626, 742
Vha464I CTTAAG 1 cut(s) 517
VneI GTGCAC 1 cut(s) 622
VpaK11BI GGWCC 2 cut(s) 49, 244
XapI RAATTY 3 cut(s) 499, 681, 1108
XceI RCATGY 2 cut(s) 301, 693
XhoI CTCGAG 1 cut(s) 400
XmiI GTMKAC 1 cut(s) 770
XspI CTAG 2 cut(s) 453, 1067
Zsp2I ATGCAT 1 cut(s) 899
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.