Rmu_co8241929.1_g000001

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8241929.1
Physical Location & Seq
Reverse (-)
2 .. 346
345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8241929.1_g000001.1.cds

Sequence Viewer

Length: 345 bp
atggagttgcgactctctttggtggcagtcctactgctgttatcggcggctagtactactacgtcgacaacagcagctcctgctcaagccaagcttggctgctcagacaagtgcggcaatctcacaattccatatccatttggcatgaagaaggattgttacctgcgagaagaattctttatcaattgtagccataccacccaatcaccagtggcatatttgatggaagggagtctcattgttactaacatttcccttgatgacggtgagttgggaatattgggctccgtagctgcagattgctataacgcccagggcaatttgacgtgcagcttcccttcttcg
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

115

Amino Acids

12.15

Weight (kDa)

4.64

Isoelectric Point (pI)

32.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 171
AccI GTMKAC 1 cut(s) 65
AciI CCGC 2 cut(s) 47, 114
AcsI RAATTY 1 cut(s) 173
AfaI GTAC 1 cut(s) 55
AjiI CACGTC 1 cut(s) 327
AjnI CCWGG 1 cut(s) 312
AluBI AGCT 4 cut(s) 77, 94, 293, 333
AluI AGCT 4 cut(s) 77, 94, 293, 333
Alw26I GTCTC 1 cut(s) 239
AlwNI CAGNNNCTG 1 cut(s) 80
ApeKI GCWGC 4 cut(s) 74, 99, 293, 330
ApoI RAATTY 1 cut(s) 173
AsuHPI GGTGA 2 cut(s) 198, 278
BanII GRGCYC 1 cut(s) 287
BarI GAAGNNNNNNTAC 2 cut(s) 143, 175
BbvI GCAGC 3 cut(s) 86, 86, 280
BccI CCATC 1 cut(s) 217
BciT130I CCWGG 1 cut(s) 314
BcoDI GTCTC 1 cut(s) 239
BfaI CTAG 1 cut(s) 51
BfmI CTRYAG 1 cut(s) 294
BfuAI ACCTGC 1 cut(s) 171
BisI GCNGC 6 cut(s) 48, 75, 100, 115, 294, 331
BlsI GCNGC 6 cut(s) 49, 76, 101, 116, 295, 332
BmcAI AGTACT 1 cut(s) 55
Bme1390I CCNGG 1 cut(s) 314
BmgBI CACGTC 1 cut(s) 327
BmiI GGNNCC 1 cut(s) 286
BmrFI CCNGG 1 cut(s) 314
BpuEI CTTGAG 1 cut(s) 69
BsaJI CCNNGG 2 cut(s) 312, 313
BsaXI ACNNNNNCTCC 2 cut(s) 61, 91
Bse1I ACTGG 1 cut(s) 209
BseBI CCWGG 1 cut(s) 314
BseDI CCNNGG 2 cut(s) 312, 313
BseMII CTCAG 1 cut(s) 117
BseNI ACTGG 1 cut(s) 209
BseXI GCAGC 3 cut(s) 86, 86, 280
BsmAI GTCTC 1 cut(s) 239
Bsp1286I GDGCHC 1 cut(s) 287
BspACI CCGC 2 cut(s) 47, 114
BspCNI CTCAG 1 cut(s) 116
BspLI GGNNCC 1 cut(s) 286
BspMAI CTGCAG 1 cut(s) 298
BspMI ACCTGC 1 cut(s) 171
BsrI ACTGG 1 cut(s) 209
BssECI CCNNGG 2 cut(s) 312, 313
Bst2UI CCWGG 1 cut(s) 314
Bst4CI ACNGT 1 cut(s) 266
BstAPI GCANNNNNTGC 1 cut(s) 80
BstDEI CTNAG 1 cut(s) 103
BstMAI GTCTC 1 cut(s) 239
BstMWI GCNNNNNNNGC 1 cut(s) 80
BstNI CCWGG 1 cut(s) 314
BstSCI CCNGG 1 cut(s) 312
BstSFI CTRYAG 1 cut(s) 294
BstV1I GCAGC 3 cut(s) 86, 86, 280
BtrI CACGTC 1 cut(s) 327
BtsIMutI CAGTG 1 cut(s) 216
BveI ACCTGC 1 cut(s) 171
CaiI CAGNNNCTG 1 cut(s) 80
Csp6I GTAC 1 cut(s) 54
CviAII CATG 1 cut(s) 145
CviJI RGCY 9 cut(s) 50, 77, 89, 94, 99, 192, 285, 293, 333
CviKI_1 RGCY 9 cut(s) 50, 77, 89, 94, 99, 192, 285, 293, 333
CviQI GTAC 1 cut(s) 54
DdeI CTNAG 1 cut(s) 103
Eco24I GRGCYC 1 cut(s) 287
EcoRI GAATTC 1 cut(s) 173
EcoRII CCWGG 1 cut(s) 312
EcoT38I GRGCYC 1 cut(s) 287
FaeI CATG 1 cut(s) 148
FaiI YATR 5 cut(s) 133, 146, 195, 217, 306
FalI AAGNNNNNCTT 2 cut(s) 78, 110
FatI CATG 1 cut(s) 144
FblI GTMKAC 1 cut(s) 65
Fnu4HI GCNGC 6 cut(s) 48, 75, 100, 115, 294, 331
FriOI GRGCYC 1 cut(s) 287
Fsp4HI GCNGC 6 cut(s) 48, 75, 100, 115, 294, 331
FspBI CTAG 1 cut(s) 51
GluI GCNGC 6 cut(s) 48, 75, 100, 115, 294, 331
Hin1II CATG 1 cut(s) 148
HincII GTYRAC 1 cut(s) 66
HindII GTYRAC 1 cut(s) 66
HindIII AAGCTT 1 cut(s) 92
HinfI GANTC 2 cut(s) 12, 232
HphI GGTGA 2 cut(s) 198, 278
Hpy166II GTNNAC 1 cut(s) 66
Hpy188I TCNGA 1 cut(s) 106
Hpy8I GTNNAC 1 cut(s) 66
Hpy99I CGWCG 1 cut(s) 67
HpyAV CCTTC 2 cut(s) 145, 221
HpyCH4III ACNGT 1 cut(s) 266
HpyCH4IV ACGT 2 cut(s) 62, 326
HpyCH4V TGCA 2 cut(s) 296, 330
HpyF10VI GCNNNNNNNGC 1 cut(s) 80
HpyF3I CTNAG 1 cut(s) 103
HpySE526I ACGT 2 cut(s) 62, 326
Hsp92II CATG 1 cut(s) 148
LmnI GCTCC 2 cut(s) 82, 290
LpnPI CCDG 5 cut(s) 93, 176, 222, 299, 326
Lsp1109I GCAGC 3 cut(s) 86, 86, 280
MaeI CTAG 1 cut(s) 51
MaeII ACGT 2 cut(s) 62, 326
MaeIII GTNAC 2 cut(s) 158, 241
MboII GAAGA 3 cut(s) 160, 182, 333
MfeI CAATTG 1 cut(s) 184
MhlI GDGCHC 1 cut(s) 287
MluCI AATT 4 cut(s) 126, 173, 184, 319
MlyI GAGTC 2 cut(s) 6, 241
MspR9I CCNGG 1 cut(s) 314
MunI CAATTG 1 cut(s) 184
MvaI CCWGG 1 cut(s) 314
MwoI GCNNNNNNNGC 1 cut(s) 80
NlaIII CATG 1 cut(s) 148
NlaIV GGNNCC 1 cut(s) 286
PasI CCCWGGG 1 cut(s) 313
PkrI GCNGC 6 cut(s) 49, 76, 101, 116, 295, 332
PleI GAGTC 2 cut(s) 6, 240
PpsI GAGTC 2 cut(s) 6, 240
Psp6I CCWGG 1 cut(s) 312
PspGI CCWGG 1 cut(s) 312
PspN4I GGNNCC 1 cut(s) 286
PstI CTGCAG 1 cut(s) 298
PstNI CAGNNNCTG 1 cut(s) 80
RsaI GTAC 1 cut(s) 55
RsaNI GTAC 1 cut(s) 54
SalI GTCGAC 1 cut(s) 64
SatI GCNGC 6 cut(s) 48, 75, 100, 115, 294, 331
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 2 cut(s) 6, 241
ScrFI CCNGG 1 cut(s) 314
SduI GDGCHC 1 cut(s) 287
SetI ASST 7 cut(s) 65, 79, 96, 165, 295, 329, 335
SfcI CTRYAG 1 cut(s) 294
SmlI CTYRAG 1 cut(s) 84
SmoI CTYRAG 1 cut(s) 84
Sse9I AATT 4 cut(s) 126, 173, 184, 319
SsiI CCGC 2 cut(s) 47, 114
SspI AATATT 1 cut(s) 279
SspMI CTAG 1 cut(s) 51
StyD4I CCNGG 1 cut(s) 312
TaaI ACNGT 1 cut(s) 266
TaiI ACGT 2 cut(s) 65, 329
TaqI TCGA 1 cut(s) 65
TasI AATT 4 cut(s) 126, 173, 184, 319
TatI WGTACW 1 cut(s) 53
TauI GCSGC 2 cut(s) 50, 117
TscAI CASTG 1 cut(s) 216
TseI GCWGC 4 cut(s) 74, 99, 293, 330
TspDTI ATGAA 1 cut(s) 161
TspGWI ACGGA 1 cut(s) 277
TspRI CASTG 1 cut(s) 216
XapI RAATTY 1 cut(s) 173
XmiI GTMKAC 1 cut(s) 65
XspI CTAG 1 cut(s) 51
ZrmI AGTACT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.