Rmu_sc0005319.1_g000018

specification of plant organ axis polarity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005319.1
OG0000066
Physical Location & Seq
Forward (+)
84029 .. 94646
10618 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005319.1_g000018.1.cds

Sequence Viewer

Length: 1962 bp
atggcgttgcgactctcattggtggcagtcctactcctgttattggtggctagtactactacaacaacagcagctgctgctcaagccctgcctggttgctcagacaagtgcggcaatctcacaattccatacccatttggcatggaggagggttgttacctgcgagaagaattctttatcaagtgtagcaataccacccaaccaccaacagcatatttaagagtcagcaatatccttgttactaacatttcccttgatgaaggtgagttgcaaatatccaacaacgtggctgaagcttgctataacgagcagggcaatgtgacatccagcaacgattattcgctcgacctgccccttccttatacgatatccgataccaaaaacaagttctacactgttggtgagttgcaaatatccaacaacgtggctgaagcttgctataacgagcagggcaatgtgacatccagcaacgattattcgctcgacctgccccttccttatacgatatccgataccaaaaacaagctctacaccgttggttgtgacacttattcaattttacaaggcttccgaggggaagatgagttcgatacggggtgcatttccatattcaacaggcttgacattgttgatcaatattcttgctctggcgctgggtgttgccagactaacatccccagagggttgaaaaatacgacggtgacgttggataccatcaacagtcataaggatataggggactctaacccctgcagctacgccttcattgcagaccaaggacagttcaatttctctaatgcaagtttaaagaaacaggacaaaaactaccggcttccagcggttcttaattgggctattgggaatgacacagactcctgtgatgaagctcaaaagaggaaggatttcgcttgcaaggctaatagcaggtgcgccaacgggcctatcaacgggtctgtaggttacttgtgccaatgcttacctggttatgaaggaaacccctaccatcctgatggttgccaagatattgatgagtgcacggctttaaacccctgcaatggactgaatgaagtatgtgtaaattcactggggaattactcttgtttatgtcgcaatggctacaaaaacaatggcccgaatggaaagtgcattaaagacaattccagcgaccgtctcctgctcataattctttcattgggaatttctgtaggcctatttgtgattttattagttggaagtttatggatgtattggggactgaagaaaaatgacaattacacagccaaagtgtcagattttggagcttcacgcttcattcctattgatcagactcaactagcaacaatggtgcaaggaacatttggatacttggaccctgaatacttccattcaaatcaactaacagaaaagagtgacgtctatagctttggagtggttctagcagagctactcacaagtaaagaggcattttcttttgcaaggcctgaggcagagagatgccttgcacacttttttgtttgttcggtggaagatggtcacttgaaccaaattctatatgatgacattattaatgaaggagatattgaccagacagtaatagaaaatgtggcccatcttgcaagaagatgtttgagggtaaaaggggaggaaaggcctaccatgagagaagtagccatggagctagaaggaatgattatgacaaagcatccacggggttctgcagatcattacttcccagaagagactacgcacttgctcggatcacctaatacttccaaggattatgttgtgaattttgatggtgatgttggtcctggtacaaccagtgggcaagactgcttttgcaactccaccggcctaatattgtccagccatgttttggcttttgatgaccctaggcaagaaaaattccaagcccatgacatttttcttgcccaggcttggccggctgccaacatggaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase_Tyr

Protein Analysis

653

Amino Acids

71.81

Weight (kDa)

4.67

Isoelectric Point (pI)

28.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 915
AatII GACGTC 1 cut(s) 1416
Acc36I ACCTGC 4 cut(s) 168, 357, 495, 915
AccB7I CCANNNNNTGG 1 cut(s) 1876
AciI CCGC 2 cut(s) 111, 839
AclWI GGATC 1 cut(s) 1765
AcoI YGGCCR 1 cut(s) 1940
AcsI RAATTY 6 cut(s) 170, 1078, 1197, 1545, 1789, 1904
AcuI CTGAAG 3 cut(s) 312, 450, 1277
AcyI GRCGYC 1 cut(s) 1413
AfaI GTAC 2 cut(s) 55, 1816
AfiI CCNNNNNNNGG 5 cut(s) 43, 947, 1055, 1876, 1938
AgsI TTSAA 6 cut(s) 555, 613, 688, 787, 1389, 1540
AjnI CCWGG 4 cut(s) 91, 979, 1810, 1932
AjuI GAANNNNNNNTTGG 2 cut(s) 371, 403
AloI GAACNNNNNNTCC 2 cut(s) 569, 601
Alw21I GWGCWC 1 cut(s) 1037
Alw26I GTCTC 2 cut(s) 1175, 1733
Alw44I GTGCAC 1 cut(s) 1033
AlwI GGATC 1 cut(s) 1765
AlwNI CAGNNNCTG 2 cut(s) 74, 77
AoxI GGCC 8 cut(s) 938, 1129, 1207, 1478, 1605, 1649, 1852, 1940
ApaLI GTGCAC 1 cut(s) 1033
ApeKI GCWGC 5 cut(s) 71, 74, 77, 753, 1946
ApoI RAATTY 6 cut(s) 170, 1078, 1197, 1545, 1789, 1904
AseI ATTAAT 1 cut(s) 1566
Asp700I GAANNNNTTC 1 cut(s) 902
AspA2I CCTAGG 1 cut(s) 1892
AspLEI GCGC 2 cut(s) 653, 932
AspS9I GGNCC 5 cut(s) 938, 1130, 1369, 1606, 1808
AsuHPI GGTGA 5 cut(s) 275, 413, 712, 1752, 1811
AvaII GGWCC 2 cut(s) 1369, 1808
AvrII CCTAGG 1 cut(s) 1892
AxyI CCTNAGG 1 cut(s) 1482
BaeGI GKGCMC 1 cut(s) 1037
Bbv12I GWGCWC 1 cut(s) 1037
BbvI GCAGC 5 cut(s) 61, 64, 83, 765, 1933
BccI CCATC 6 cut(s) 722, 1004, 1011, 1523, 1617, 1790
BceAI ACGGC 1 cut(s) 1053
BciT130I CCWGG 4 cut(s) 93, 981, 1812, 1934
BciVI GTATCC 2 cut(s) 703, 1355
BclI TGATCA 2 cut(s) 631, 1321
BcoDI GTCTC 2 cut(s) 1175, 1733
BfaI CTAG 5 cut(s) 51, 1334, 1436, 1679, 1893
BfmI CTRYAG 5 cut(s) 751, 954, 1203, 1417, 1716
BfoI RGCGCY 1 cut(s) 654
BfuAI ACCTGC 4 cut(s) 168, 357, 495, 915
BfuI GTATCC 2 cut(s) 703, 1355
BisI GCNGC 6 cut(s) 72, 75, 78, 112, 754, 1947
BlnI CCTAGG 1 cut(s) 1892
BlsI GCNGC 6 cut(s) 73, 76, 79, 113, 755, 1948
BmcAI AGTACT 1 cut(s) 55
Bme1390I CCNGG 4 cut(s) 93, 981, 1812, 1934
Bme18I GGWCC 2 cut(s) 1369, 1808
BmgT120I GGNCC 5 cut(s) 938, 1130, 1369, 1606, 1808
BmiI GGNNCC 1 cut(s) 1371
BmrFI CCNGG 4 cut(s) 93, 981, 1812, 1934
BmrI ACTGGG 1 cut(s) 1094
BmsI GCATC 2 cut(s) 1484, 1711
BmuI ACTGGG 1 cut(s) 1094
BpuEI CTTGAG 1 cut(s) 66
BsaHI GRCGYC 1 cut(s) 1413
BsaJI CCNNGG 7 cut(s) 571, 775, 1671, 1706, 1773, 1892, 1932
BsaXI ACNNNNNCTCC 2 cut(s) 857, 887
Bsc4I CCNNNNNNNGG 5 cut(s) 43, 947, 1055, 1876, 1938
Bse118I RCCGGY 3 cut(s) 828, 1850, 1942
Bse1I ACTGG 2 cut(s) 1089, 1821
Bse21I CCTNAGG 1 cut(s) 1482
Bse3DI GCAATG 5 cut(s) 322, 460, 765, 1060, 1117
BseBI CCWGG 4 cut(s) 93, 981, 1812, 1934
BseDI CCNNGG 7 cut(s) 571, 775, 1671, 1706, 1773, 1892, 1932
BseGI GGATG 6 cut(s) 323, 461, 672, 1003, 1248, 1702
BseLI CCNNNNNNNGG 5 cut(s) 43, 947, 1055, 1876, 1938
BseMI GCAATG 5 cut(s) 322, 460, 765, 1060, 1117
BseMII CTCAG 2 cut(s) 114, 1473
BseNI ACTGG 2 cut(s) 1089, 1821
BseRI GAGGAG 1 cut(s) 161
BseSI GKGCMC 1 cut(s) 1037
BseXI GCAGC 5 cut(s) 61, 64, 83, 765, 1933
BseYI CCCAGC 1 cut(s) 653
Bsh1285I CGRYCG 1 cut(s) 1168
BshFI GGCC 8 cut(s) 940, 1131, 1209, 1480, 1607, 1651, 1854, 1942
BsiEI CGRYCG 1 cut(s) 1168
BsiHKAI GWGCWC 1 cut(s) 1037
BsiSI CCGG 3 cut(s) 829, 1851, 1943
BslFI GGGAC 2 cut(s) 752, 1266
BslI CCNNNNNNNGG 5 cut(s) 43, 947, 1055, 1876, 1938
BsmAI GTCTC 2 cut(s) 1175, 1733
BsmBI CGTCTC 1 cut(s) 1175
BsmFI GGGAC 2 cut(s) 752, 1266
BsnI GGCC 8 cut(s) 940, 1131, 1209, 1480, 1607, 1651, 1854, 1942
Bsp1286I GDGCHC 1 cut(s) 1037
Bsp143I GATC 4 cut(s) 631, 1321, 1720, 1757
Bsp19I CCATGG 1 cut(s) 1671
BspACI CCGC 2 cut(s) 111, 839
BspANI GGCC 8 cut(s) 940, 1131, 1209, 1480, 1607, 1651, 1854, 1942
BspCNI CTCAG 2 cut(s) 113, 1474
BspLI GGNNCC 1 cut(s) 1371
BspMAI CTGCAG 2 cut(s) 755, 1720
BspMI ACCTGC 4 cut(s) 168, 357, 495, 915
BspPI GGATC 1 cut(s) 1765
BsrDI GCAATG 5 cut(s) 322, 460, 765, 1060, 1117
BsrFI RCCGGY 3 cut(s) 828, 1850, 1942
BsrI ACTGG 2 cut(s) 1089, 1821
BssAI RCCGGY 3 cut(s) 828, 1850, 1942
BssECI CCNNGG 7 cut(s) 571, 775, 1671, 1706, 1773, 1892, 1932
BssMI GATC 4 cut(s) 631, 1321, 1720, 1757
BssNI GRCGYC 1 cut(s) 1413
BssT1I CCWWGG 4 cut(s) 775, 1671, 1773, 1892
Bst2UI CCWGG 4 cut(s) 93, 981, 1812, 1934
Bst4CI ACNGT 7 cut(s) 397, 535, 700, 722, 783, 1169, 1591
Bst6I CTCTTC 1 cut(s) 1731
BstACI GRCGYC 1 cut(s) 1413
BstAPI GCANNNNNTGC 1 cut(s) 77
BstC8I GCNNGC 4 cut(s) 298, 436, 910, 1944
BstDEI CTNAG 2 cut(s) 100, 1482
BstDSI CCRYGG 2 cut(s) 1671, 1706
BstF5I GGATG 6 cut(s) 323, 461, 672, 1003, 1248, 1702
BstH2I RGCGCY 1 cut(s) 654
BstHHI GCGC 2 cut(s) 653, 932
BstKTI GATC 4 cut(s) 634, 1324, 1723, 1760
BstMAI GTCTC 2 cut(s) 1175, 1733
BstMBI GATC 4 cut(s) 631, 1321, 1720, 1757
BstMCI CGRYCG 1 cut(s) 1168
BstMWI GCNNNNNNNGC 8 cut(s) 77, 83, 349, 487, 767, 914, 1613, 1943
BstNI CCWGG 4 cut(s) 93, 981, 1812, 1934
BstSCI CCNGG 4 cut(s) 91, 979, 1810, 1932
BstSFI CTRYAG 5 cut(s) 751, 954, 1203, 1417, 1716
BstSLI GKGCMC 1 cut(s) 1037
BstV1I GCAGC 5 cut(s) 61, 64, 83, 765, 1933
BstXI CCANNNNNNTGG 3 cut(s) 286, 424, 1010
Bsu36I CCTNAGG 1 cut(s) 1482
BsuI GTATCC 2 cut(s) 703, 1355
BsuRI GGCC 8 cut(s) 940, 1131, 1209, 1480, 1607, 1651, 1854, 1942
BtgI CCRYGG 2 cut(s) 1671, 1706
BtsCI GGATG 6 cut(s) 323, 461, 672, 1003, 1248, 1702
BtsIMutI CAGTG 3 cut(s) 393, 1082, 1828
BveI ACCTGC 4 cut(s) 168, 357, 495, 915
Cac8I GCNNGC 4 cut(s) 298, 436, 910, 1944
CaiI CAGNNNCTG 2 cut(s) 74, 77
CfoI GCGC 2 cut(s) 653, 932
Cfr10I RCCGGY 3 cut(s) 828, 1850, 1942
Cfr13I GGNCC 5 cut(s) 938, 1130, 1369, 1606, 1808
CsiI ACCWGGT 1 cut(s) 979
Csp6I GTAC 2 cut(s) 54, 1815
CviAII CATG 6 cut(s) 142, 1657, 1672, 1871, 1916, 1954
CviQI GTAC 2 cut(s) 54, 1815
DdeI CTNAG 2 cut(s) 100, 1482
DpnI GATC 4 cut(s) 633, 1323, 1722, 1759
DpnII GATC 4 cut(s) 631, 1321, 1720, 1757
DraI TTTAAA 2 cut(s) 807, 1044
EaeI YGGCCR 1 cut(s) 1940
Eam1104I CTCTTC 1 cut(s) 1731
EarI CTCTTC 1 cut(s) 1731
Eco130I CCWWGG 4 cut(s) 775, 1671, 1773, 1892
Eco147I AGGCCT 3 cut(s) 1209, 1480, 1651
Eco32I GATATC 2 cut(s) 369, 507
Eco47I GGWCC 2 cut(s) 1369, 1808
Eco57I CTGAAG 3 cut(s) 312, 450, 1277
Eco81I CCTNAGG 1 cut(s) 1482
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 4 cut(s) 91, 979, 1810, 1932
EcoRV GATATC 2 cut(s) 369, 507
EcoT14I CCWWGG 4 cut(s) 775, 1671, 1773, 1892
ErhI CCWWGG 4 cut(s) 775, 1671, 1773, 1892
Esp3I CGTCTC 1 cut(s) 1175
FaeI CATG 6 cut(s) 145, 1660, 1675, 1874, 1919, 1957
FaqI GGGAC 2 cut(s) 752, 1266
FatI CATG 6 cut(s) 141, 1656, 1671, 1870, 1915, 1953
FbaI TGATCA 2 cut(s) 631, 1321
Fnu4HI GCNGC 6 cut(s) 72, 75, 78, 112, 754, 1947
FokI GGATG 6 cut(s) 310, 448, 659, 990, 1255, 1689
Fsp4HI GCNGC 6 cut(s) 72, 75, 78, 112, 754, 1947
FspBI CTAG 5 cut(s) 51, 1334, 1436, 1679, 1893
GlaI GCGC 2 cut(s) 652, 931
GluI GCNGC 6 cut(s) 72, 75, 78, 112, 754, 1947
GsaI CCCAGC 1 cut(s) 657
HaeII RGCGCY 1 cut(s) 654
HaeIII GGCC 8 cut(s) 940, 1131, 1209, 1480, 1607, 1651, 1854, 1942
HapII CCGG 3 cut(s) 829, 1851, 1943
HhaI GCGC 2 cut(s) 653, 932
Hin1I GRCGYC 1 cut(s) 1413
Hin1II CATG 6 cut(s) 145, 1660, 1675, 1874, 1919, 1957
Hin6I GCGC 2 cut(s) 651, 930
HinP1I GCGC 2 cut(s) 651, 930
HindIII AAGCTT 2 cut(s) 294, 432
HinfI GANTC 5 cut(s) 12, 222, 740, 872, 1327
HpaII CCGG 3 cut(s) 829, 1851, 1943
HphI GGTGA 5 cut(s) 275, 413, 712, 1752, 1811
Hpy166II GTNNAC 1 cut(s) 1035
Hpy188I TCNGA 7 cut(s) 103, 373, 511, 572, 1291, 1326, 1757
Hpy188III TCNNGA 1 cut(s) 1007
Hpy8I GTNNAC 1 cut(s) 1035
Hpy99I CGWCG 1 cut(s) 700
HpyAV CCTTC 8 cut(s) 254, 365, 503, 772, 892, 983, 1565, 1676
HpyCH4III ACNGT 7 cut(s) 397, 535, 700, 722, 783, 1169, 1591
HpyCH4IV ACGT 4 cut(s) 285, 423, 704, 1413
HpyF10VI GCNNNNNNNGC 8 cut(s) 77, 83, 349, 487, 767, 914, 1613, 1943
HpyF3I CTNAG 2 cut(s) 100, 1482
HpySE526I ACGT 4 cut(s) 285, 423, 704, 1413
Hsp92I GRCGYC 1 cut(s) 1413
Hsp92II CATG 6 cut(s) 145, 1660, 1675, 1874, 1919, 1957
HspAI GCGC 2 cut(s) 651, 930
KroI GCCGGC 1 cut(s) 1942
KroNI GCCGGC 1 cut(s) 1944
Ksp22I TGATCA 2 cut(s) 631, 1321
Kzo9I GATC 4 cut(s) 631, 1321, 1720, 1757
LmnI GCTCC 2 cut(s) 1298, 1675
Lsp1109I GCAGC 5 cut(s) 61, 64, 83, 765, 1933
LweI GCATC 2 cut(s) 1484, 1711
MabI ACCWGGT 1 cut(s) 979
MaeI CTAG 5 cut(s) 51, 1334, 1436, 1679, 1893
MaeII ACGT 4 cut(s) 285, 423, 704, 1413
MaeIII GTNAC 9 cut(s) 155, 238, 319, 457, 542, 700, 959, 1409, 1532
MalI GATC 4 cut(s) 633, 1323, 1722, 1759
MboI GATC 4 cut(s) 631, 1321, 1720, 1757
MboII GAAGA 6 cut(s) 179, 590, 1270, 1538, 1632, 1748
MhlI GDGCHC 1 cut(s) 1037
MlyI GAGTC 5 cut(s) 6, 231, 734, 866, 1321
MmeI TCCRAC 4 cut(s) 303, 441, 687, 1210
MnlI CCTC 9 cut(s) 139, 142, 566, 674, 888, 1453, 1477, 1623, 1636
MroNI GCCGGC 1 cut(s) 1942
MroXI GAANNNNTTC 1 cut(s) 902
MseI TTAA 6 cut(s) 218, 806, 846, 1043, 1149, 1566
MslI CAYNNNNRTG 1 cut(s) 1008
MspA1I CMGCKG 2 cut(s) 74, 839
MspI CCGG 3 cut(s) 829, 1851, 1943
MspR9I CCNGG 4 cut(s) 93, 981, 1812, 1934
MvaI CCWGG 4 cut(s) 93, 981, 1812, 1934
MwoI GCNNNNNNNGC 8 cut(s) 77, 83, 349, 487, 767, 914, 1613, 1943
NaeI GCCGGC 1 cut(s) 1944
NcoI CCATGG 1 cut(s) 1671
NdeII GATC 4 cut(s) 631, 1321, 1720, 1757
NgoMIV GCCGGC 1 cut(s) 1942
NlaIII CATG 6 cut(s) 145, 1660, 1675, 1874, 1919, 1957
NlaIV GGNNCC 1 cut(s) 1371
NmuCI GTSAC 6 cut(s) 319, 457, 542, 700, 1409, 1532
PaqCI CACCTGC 1 cut(s) 915
PceI AGGCCT 3 cut(s) 1209, 1480, 1651
PcsI WCGNNNNNNNCGW 1 cut(s) 701
PdiI GCCGGC 1 cut(s) 1944
PdmI GAANNNNTTC 1 cut(s) 902
PflMI CCANNNNNTGG 1 cut(s) 1876
PkrI GCNGC 6 cut(s) 73, 76, 79, 113, 755, 1948
PleI GAGTC 5 cut(s) 6, 230, 734, 866, 1321
PpsI GAGTC 5 cut(s) 6, 230, 734, 866, 1321
PshBI ATTAAT 1 cut(s) 1566
Psp6I CCWGG 4 cut(s) 91, 979, 1810, 1932
PspFI CCCAGC 1 cut(s) 653
PspGI CCWGG 4 cut(s) 91, 979, 1810, 1932
PspN4I GGNNCC 1 cut(s) 1371
PspPI GGNCC 5 cut(s) 938, 1130, 1369, 1606, 1808
PstI CTGCAG 2 cut(s) 755, 1720
PstNI CAGNNNCTG 2 cut(s) 74, 77
PvuII CAGCTG 1 cut(s) 74
RsaI GTAC 2 cut(s) 55, 1816
RsaNI GTAC 2 cut(s) 54, 1815
RseI CAYNNNNRTG 1 cut(s) 1008
SaqAI TTAA 6 cut(s) 218, 806, 846, 1043, 1149, 1566
SatI GCNGC 6 cut(s) 72, 75, 78, 112, 754, 1947
Sau3AI GATC 4 cut(s) 631, 1321, 1720, 1757
Sau96I GGNCC 5 cut(s) 938, 1130, 1369, 1606, 1808
ScaI AGTACT 1 cut(s) 55
SchI GAGTC 5 cut(s) 6, 231, 734, 866, 1321
ScrFI CCNGG 4 cut(s) 93, 981, 1812, 1934
SduI GDGCHC 1 cut(s) 1037
SexAI ACCWGGT 1 cut(s) 979
SfaNI GCATC 2 cut(s) 1484, 1711
SfcI CTRYAG 5 cut(s) 751, 954, 1203, 1417, 1716
SinI GGWCC 2 cut(s) 1369, 1808
SmiMI CAYNNNNRTG 1 cut(s) 1008
SmlI CTYRAG 1 cut(s) 81
SmoI CTYRAG 1 cut(s) 81
SseBI AGGCCT 3 cut(s) 1209, 1480, 1651
SsiI CCGC 2 cut(s) 111, 839
SspI AATATT 2 cut(s) 638, 1860
SspMI CTAG 5 cut(s) 51, 1334, 1436, 1679, 1893
StuI AGGCCT 3 cut(s) 1209, 1480, 1651
StyD4I CCNGG 4 cut(s) 91, 979, 1810, 1932
StyI CCWWGG 4 cut(s) 775, 1671, 1773, 1892
TaaI ACNGT 7 cut(s) 397, 535, 700, 722, 783, 1169, 1591
TaiI ACGT 4 cut(s) 288, 426, 707, 1416
TaqI TCGA 3 cut(s) 345, 483, 588
TatI WGTACW 1 cut(s) 53
TauI GCSGC 1 cut(s) 114
Tru1I TTAA 6 cut(s) 218, 806, 846, 1043, 1149, 1566
Tru9I TTAA 6 cut(s) 218, 806, 846, 1043, 1149, 1566
TscAI CASTG 3 cut(s) 400, 1089, 1828
TseFI GTSAC 6 cut(s) 319, 457, 542, 700, 1409, 1532
TseI GCWGC 5 cut(s) 71, 74, 77, 753, 1946
Tsp45I GTSAC 6 cut(s) 319, 457, 542, 700, 1409, 1532
TspDTI ATGAA 8 cut(s) 273, 754, 897, 1002, 1080, 1179, 1300, 1584
TspRI CASTG 3 cut(s) 400, 1089, 1828
Van91I CCANNNNNTGG 1 cut(s) 1876
VneI GTGCAC 1 cut(s) 1033
VpaK11BI GGWCC 2 cut(s) 1369, 1808
VspI ATTAAT 1 cut(s) 1566
XapI RAATTY 6 cut(s) 170, 1078, 1197, 1545, 1789, 1904
XcmI CCANNNNNNNNNTGG 2 cut(s) 977, 1873
XmaJI CCTAGG 1 cut(s) 1892
XmnI GAANNNNTTC 1 cut(s) 902
XspI CTAG 5 cut(s) 51, 1334, 1436, 1679, 1893
ZraI GACGTC 1 cut(s) 1414
ZrmI AGTACT 1 cut(s) 55
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.