MD10G1249200.v1.1

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000066
Physical Location & Seq
Forward (+)
34208634 .. 34209569
936 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1249200.v1.1.491

Sequence Viewer

Length: 915 bp
ATGGCGTTACTTAGGAGGATGCATATTTTGCATCTCTCTTTAGTAATGGTGGTGGTAGTTACAATTTTACTAGGAATTCCAACTCCAACCACAGCTCAATCTCTCCTTCCGCCTCAGGCACTGCCTGGCTGCCCTGACCATTGTGGTAATCTCACAATTCCATACCCATTTGGCATAGGCGATGGTTGCTACCTCAACGACCGGTTTAACATCACTTATAACATTTCCACTCAACCGCCAACAGCATTTATGATGACGAGCAATCTCGAAATTACCAACATTTCTCTTTATGACGGTGAGCTCCAAATACTACAGTTCACATCCAGTGATTGTTATGATGCCCAAGGCAACAGGACCCGACGGAACCGTCCCAAGCTCTGGGTGCCTCCTCCTTACACCATCTCCAAAACCAAAAACGTGTTCGTTGCAGTTGGATGCGACACATATGCGTTTTTTATAGGTTACCGGGGTGAAGAAAAGTACACAACTGGGTGTATGTCCATATGTGACAATCTTGGCAAAGCTATCGATCAGCGGGATACTTGCTCTGGCTTTGGATGTTGCCAAACTAAAATCCCCGGTGGGCTGCAAAATCAGACTGTGACCTTGGGAAGTTTAGACAATTATACGGATGTGCAGGACTCCCACCGATGCAGCTACGCGTTCCTTGTGCAAGAAGGCGAGTTCAACTTTACCAGCACGAGTTTTCGAGAACTAAACGAAACAACCAAGCTTCCGGCAATTATTGATTGGGTAATTGGGAATAAGTCATGTGATATTGCAGCTAAAAACGAGAGCACTTTTGCATGCAAGGCAAATAGCTCCTGCCATACTCGGTCTTCAGGCTACATATGCCGGTGCTGGTCAGGTTACGAAGGGAACCCATACCTCCCAGGTGGTTGCCAAGGTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

305

Amino Acids

33.53

Weight (kDa)

6.5

Isoelectric Point (pI)

49.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 44 - 103 9.7e-09 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 219
AasI GACNNNNNNGTC 1 cut(s) 366
AccB1I GGYRCC 1 cut(s) 382
AccB7I CCANNNNNTGG 1 cut(s) 378
AccII CGCG 1 cut(s) 662
AciI CCGC 3 cut(s) 110, 236, 535
AcsI RAATTY 1 cut(s) 75
AcuI CTGAAG 1 cut(s) 825
AfaI GTAC 1 cut(s) 482
AfiI CCNNNNNNNGG 1 cut(s) 378
AflIII ACRYGT 2 cut(s) 417, 660
AgeI ACCGGT 1 cut(s) 201
AgsI TTSAA 1 cut(s) 688
AjnI CCWGG 2 cut(s) 124, 892
AjuI GAANNNNNNNTTGG 2 cut(s) 404, 436
AluBI AGCT 8 cut(s) 95, 301, 376, 524, 657, 733, 785, 822
AluI AGCT 8 cut(s) 95, 301, 376, 524, 657, 733, 785, 822
Alw21I GWGCWC 2 cut(s) 303, 800
AlwNI CAGNNNCTG 1 cut(s) 121
ApeKI GCWGC 4 cut(s) 129, 586, 654, 782
ApoI RAATTY 1 cut(s) 75
AsiGI ACCGGT 1 cut(s) 201
AspS9I GGNCC 1 cut(s) 354
AsuC2I CCSGG 2 cut(s) 467, 579
AsuHPI GGTGA 2 cut(s) 308, 482
AvaII GGWCC 1 cut(s) 354
AxyI CCTNAGG 1 cut(s) 114
BanI GGYRCC 1 cut(s) 382
BanII GRGCYC 1 cut(s) 303
BauI CACGAG 1 cut(s) 700
BbsI GAAGAC 1 cut(s) 831
Bbv12I GWGCWC 2 cut(s) 303, 800
BbvI GCAGC 4 cut(s) 116, 573, 666, 794
BccI CCATC 2 cut(s) 176, 407
BcgI CGANNNNNNTGC 4 cut(s) 428, 462, 508, 542
BciT130I CCWGG 2 cut(s) 126, 894
BciVI GTATCC 1 cut(s) 532
BcnI CCSGG 2 cut(s) 467, 579
BfaI CTAG 1 cut(s) 71
BfmI CTRYAG 1 cut(s) 311
BfuI GTATCC 1 cut(s) 532
BisI GCNGC 4 cut(s) 130, 587, 655, 783
BlsI GCNGC 4 cut(s) 131, 588, 656, 784
Bme1390I CCNGG 4 cut(s) 126, 467, 579, 894
Bme18I GGWCC 1 cut(s) 354
BmgT120I GGNCC 1 cut(s) 354
BmiI GGNNCC 4 cut(s) 356, 365, 384, 881
BmrFI CCNGG 4 cut(s) 126, 467, 579, 894
BmrI ACTGGG 1 cut(s) 498
BmsI GCATC 5 cut(s) 9, 40, 328, 425, 641
BmuI ACTGGG 1 cut(s) 498
BpiI GAAGAC 1 cut(s) 831
BpuMI CCSGG 2 cut(s) 467, 579
Bsa29I ATCGAT 1 cut(s) 528
BsaJI CCNNGG 6 cut(s) 343, 466, 577, 606, 892, 904
BsaWI WCCGGW 1 cut(s) 201
BsaXI ACNNNNNCTCC 2 cut(s) 386, 416
Bsc4I CCNNNNNNNGG 1 cut(s) 378
Bse118I RCCGGY 2 cut(s) 201, 855
Bse1I ACTGG 2 cut(s) 324, 493
Bse21I CCTNAGG 1 cut(s) 114
BseBI CCWGG 2 cut(s) 126, 894
BseCI ATCGAT 1 cut(s) 528
BseDI CCNNGG 6 cut(s) 343, 466, 577, 606, 892, 904
BseGI GGATG 5 cut(s) 24, 320, 440, 563, 637
BseLI CCNNNNNNNGG 1 cut(s) 378
BseMII CTCAG 1 cut(s) 128
BseNI ACTGG 2 cut(s) 324, 493
BseRI GAGGAG 1 cut(s) 378
BseXI GCAGC 4 cut(s) 116, 573, 666, 794
BsgI GTGCAG 1 cut(s) 656
Bsh1236I CGCG 1 cut(s) 662
Bsh1285I CGRYCG 1 cut(s) 202
BshNI GGYRCC 1 cut(s) 382
BshTI ACCGGT 1 cut(s) 201
BshVI ATCGAT 1 cut(s) 528
BsiEI CGRYCG 1 cut(s) 202
BsiHKAI GWGCWC 2 cut(s) 303, 800
BsiSI CCGG 5 cut(s) 202, 466, 579, 737, 856
BslFI GGGAC 1 cut(s) 354
BslI CCNNNNNNNGG 1 cut(s) 378
BsmFI GGGAC 1 cut(s) 354
Bsp1286I GDGCHC 2 cut(s) 303, 800
Bsp143I GATC 1 cut(s) 529
BspACI CCGC 3 cut(s) 110, 236, 535
BspCNI CTCAG 1 cut(s) 127
BspDI ATCGAT 1 cut(s) 528
BspFNI CGCG 1 cut(s) 662
BspLI GGNNCC 4 cut(s) 356, 365, 384, 881
BspT107I GGYRCC 1 cut(s) 382
BsrFI RCCGGY 2 cut(s) 201, 855
BsrI ACTGG 2 cut(s) 324, 493
BssAI RCCGGY 2 cut(s) 201, 855
BssECI CCNNGG 6 cut(s) 343, 466, 577, 606, 892, 904
BssMI GATC 1 cut(s) 529
BssSI CACGAG 1 cut(s) 700
BssT1I CCWWGG 3 cut(s) 343, 606, 904
Bst2BI CACGAG 1 cut(s) 700
Bst2UI CCWGG 2 cut(s) 126, 894
Bst4CI ACNGT 4 cut(s) 296, 315, 368, 601
BstAPI GCANNNNNTGC 1 cut(s) 28
BstC8I GCNNGC 1 cut(s) 808
BstDEI CTNAG 2 cut(s) 11, 114
BstEII GGTNACC 1 cut(s) 461
BstF5I GGATG 5 cut(s) 24, 320, 440, 563, 637
BstFNI CGCG 1 cut(s) 662
BstKTI GATC 1 cut(s) 532
BstMBI GATC 1 cut(s) 529
BstMCI CGRYCG 1 cut(s) 202
BstMWI GCNNNNNNNGC 5 cut(s) 28, 186, 382, 812, 852
BstNI CCWGG 2 cut(s) 126, 894
BstNSI RCATGY 1 cut(s) 810
BstPI GGTNACC 1 cut(s) 461
BstSCI CCNGG 4 cut(s) 124, 465, 577, 892
BstSFI CTRYAG 1 cut(s) 311
BstUI CGCG 1 cut(s) 662
BstV1I GCAGC 4 cut(s) 116, 573, 666, 794
BstV2I GAAGAC 1 cut(s) 831
Bsu15I ATCGAT 1 cut(s) 528
Bsu36I CCTNAGG 1 cut(s) 114
BsuI GTATCC 1 cut(s) 532
BsuTUI ATCGAT 1 cut(s) 528
BtgZI GCGATG 1 cut(s) 195
BtsCI GGATG 5 cut(s) 24, 320, 440, 563, 637
BtsI GCAGTG 1 cut(s) 119
BtsIMutI CAGTG 2 cut(s) 119, 331
Cac8I GCNNGC 1 cut(s) 808
CaiI CAGNNNCTG 1 cut(s) 121
Cfr10I RCCGGY 2 cut(s) 201, 855
Cfr13I GGNCC 1 cut(s) 354
ClaI ATCGAT 1 cut(s) 528
Csp6I GTAC 1 cut(s) 481
CspAI ACCGGT 1 cut(s) 201
CviAII CATG 2 cut(s) 771, 807
CviQI GTAC 1 cut(s) 481
DdeI CTNAG 2 cut(s) 11, 114
DpnI GATC 1 cut(s) 531
DpnII GATC 1 cut(s) 529
DrdI GACNNNNNNGTC 1 cut(s) 366
DseDI GACNNNNNNGTC 1 cut(s) 366
EciI GGCGGA 1 cut(s) 99
Ecl136II GAGCTC 1 cut(s) 301
Eco130I CCWWGG 3 cut(s) 343, 606, 904
Eco24I GRGCYC 1 cut(s) 303
Eco47I GGWCC 1 cut(s) 354
Eco53kI GAGCTC 1 cut(s) 301
Eco57I CTGAAG 1 cut(s) 825
Eco81I CCTNAGG 1 cut(s) 114
Eco91I GGTNACC 1 cut(s) 461
EcoICRI GAGCTC 1 cut(s) 301
EcoO109I RGGNCCY 1 cut(s) 354
EcoO65I GGTNACC 1 cut(s) 461
EcoRI GAATTC 1 cut(s) 75
EcoRII CCWGG 2 cut(s) 124, 892
EcoT14I CCWWGG 3 cut(s) 343, 606, 904
EcoT22I ATGCAT 1 cut(s) 24
EcoT38I GRGCYC 1 cut(s) 303
ErhI CCWWGG 3 cut(s) 343, 606, 904
FaeI CATG 2 cut(s) 774, 810
FaqI GGGAC 1 cut(s) 354
FatI CATG 2 cut(s) 770, 806
FauI CCCGC 1 cut(s) 528
FauNDI CATATG 3 cut(s) 445, 503, 851
Fnu4HI GCNGC 4 cut(s) 130, 587, 655, 783
FokI GGATG 5 cut(s) 31, 307, 447, 570, 644
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 4 cut(s) 130, 587, 655, 783
FspBI CTAG 1 cut(s) 71
GluI GCNGC 4 cut(s) 130, 587, 655, 783
HapII CCGG 5 cut(s) 202, 466, 579, 737, 856
Hin1II CATG 2 cut(s) 774, 810
HindIII AAGCTT 1 cut(s) 731
HinfI GANTC 1 cut(s) 641
HpaII CCGG 5 cut(s) 202, 466, 579, 737, 856
HphI GGTGA 2 cut(s) 308, 482
Hpy166II GTNNAC 2 cut(s) 318, 483
Hpy188I TCNGA 1 cut(s) 597
Hpy188III TCNNGA 2 cut(s) 266, 710
Hpy8I GTNNAC 2 cut(s) 318, 483
Hpy99I CGWCG 1 cut(s) 363
HpyAV CCTTC 3 cut(s) 116, 671, 869
HpyCH4III ACNGT 4 cut(s) 296, 315, 368, 601
HpyCH4IV ACGT 1 cut(s) 417
HpyF10VI GCNNNNNNNGC 5 cut(s) 28, 186, 382, 812, 852
HpyF3I CTNAG 2 cut(s) 11, 114
HpySE526I ACGT 1 cut(s) 417
Hsp92II CATG 2 cut(s) 774, 810
Kzo9I GATC 1 cut(s) 529
LmnI GCTCC 2 cut(s) 306, 827
Lsp1109I GCAGC 4 cut(s) 116, 573, 666, 794
LweI GCATC 5 cut(s) 9, 40, 328, 425, 641
MaeI CTAG 1 cut(s) 71
MaeII ACGT 1 cut(s) 417
MaeIII GTNAC 6 cut(s) 6, 58, 461, 506, 601, 869
MalI GATC 1 cut(s) 531
MboI GATC 1 cut(s) 529
MboII GAAGA 2 cut(s) 485, 831
MhlI GDGCHC 2 cut(s) 303, 800
MluCI AATT 7 cut(s) 63, 75, 156, 270, 622, 741, 756
MluI ACGCGT 1 cut(s) 660
MlyI GAGTC 1 cut(s) 635
MmeI TCCRAC 3 cut(s) 104, 110, 412
MnlI CCTC 6 cut(s) 9, 123, 203, 396, 399, 899
Mph1103I ATGCAT 1 cut(s) 24
MseI TTAA 1 cut(s) 207
MspA1I CMGCKG 1 cut(s) 535
MspI CCGG 5 cut(s) 202, 466, 579, 737, 856
MspR9I CCNGG 4 cut(s) 126, 467, 579, 894
MvaI CCWGG 2 cut(s) 126, 894
MvnI CGCG 1 cut(s) 662
MwoI GCNNNNNNNGC 5 cut(s) 28, 186, 382, 812, 852
NciI CCSGG 2 cut(s) 467, 579
NdeI CATATG 3 cut(s) 445, 503, 851
NdeII GATC 1 cut(s) 529
NlaIII CATG 2 cut(s) 774, 810
NlaIV GGNNCC 4 cut(s) 356, 365, 384, 881
NmuCI GTSAC 2 cut(s) 506, 601
NsiI ATGCAT 1 cut(s) 24
NspI RCATGY 1 cut(s) 810
PaeI GCATGC 1 cut(s) 810
PflMI CCANNNNNTGG 1 cut(s) 378
PinAI ACCGGT 1 cut(s) 201
PkrI GCNGC 4 cut(s) 131, 588, 656, 784
PleI GAGTC 1 cut(s) 635
PpsI GAGTC 1 cut(s) 635
PpuMI RGGWCCY 1 cut(s) 354
PsiI TTATAA 1 cut(s) 219
Psp124BI GAGCTC 1 cut(s) 303
Psp5II RGGWCCY 1 cut(s) 354
Psp6I CCWGG 2 cut(s) 124, 892
PspEI GGTNACC 1 cut(s) 461
PspGI CCWGG 2 cut(s) 124, 892
PspN4I GGNNCC 4 cut(s) 356, 365, 384, 881
PspPI GGNCC 1 cut(s) 354
PspPPI RGGWCCY 1 cut(s) 354
PstNI CAGNNNCTG 1 cut(s) 121
RsaI GTAC 1 cut(s) 482
RsaNI GTAC 1 cut(s) 481
SacI GAGCTC 1 cut(s) 303
SaqAI TTAA 1 cut(s) 207
SatI GCNGC 4 cut(s) 130, 587, 655, 783
Sau3AI GATC 1 cut(s) 529
Sau96I GGNCC 1 cut(s) 354
SchI GAGTC 1 cut(s) 635
ScrFI CCNGG 4 cut(s) 126, 467, 579, 894
SduI GDGCHC 2 cut(s) 303, 800
SfaNI GCATC 5 cut(s) 9, 40, 328, 425, 641
SfcI CTRYAG 1 cut(s) 311
SinI GGWCC 1 cut(s) 354
SphI GCATGC 1 cut(s) 810
Sse9I AATT 7 cut(s) 63, 75, 156, 270, 622, 741, 756
SsiI CCGC 3 cut(s) 110, 236, 535
SspMI CTAG 1 cut(s) 71
SstI GAGCTC 1 cut(s) 303
StyD4I CCNGG 4 cut(s) 124, 465, 577, 892
StyI CCWWGG 3 cut(s) 343, 606, 904
TaaI ACNGT 4 cut(s) 296, 315, 368, 601
TaiI ACGT 1 cut(s) 420
TaqI TCGA 3 cut(s) 267, 528, 709
TaqII GACCGA 1 cut(s) 825
TasI AATT 7 cut(s) 63, 75, 156, 270, 622, 741, 756
TatI WGTACW 1 cut(s) 480
Tru1I TTAA 1 cut(s) 207
Tru9I TTAA 1 cut(s) 207
TscAI CASTG 2 cut(s) 126, 331
TseFI GTSAC 2 cut(s) 506, 601
TseI GCWGC 4 cut(s) 129, 586, 654, 782
Tsp45I GTSAC 2 cut(s) 506, 601
TspGWI ACGGA 2 cut(s) 376, 644
TspRI CASTG 2 cut(s) 126, 331
Van91I CCANNNNNTGG 1 cut(s) 378
VpaK11BI GGWCC 1 cut(s) 354
XapI RAATTY 1 cut(s) 75
XceI RCATGY 1 cut(s) 810
XspI CTAG 1 cut(s) 71
Zsp2I ATGCAT 1 cut(s) 24
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.