MD08G1107600.v1.1

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
9459183 .. 9461809
2627 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1107600.v1.1.491

Sequence Viewer

Length: 2145 bp
ATGCTTCTGCAACTTATCATCCTCCTAATAGTAACACAGGTACTATTAGCAGCAGCCACTTCAGCCCAAACACAATTAACCTCTCCACCTCTTCCTTCTCCTCCTCCTCCCGGTCAAGTAGAAGTCAAGCCGGGTTGTCAAGACAAATGTGGGAATGTTAGCATCCCATATCCATTTGGTACAAAAGAGGGCTGTTACTTAAATCAGGATTTCCTCATTACTTGCAATGGCATAGATTATGACCCCCCAAAACCATTTCTTAGAAAGAGTGATTCGATTGAAGTCACAAACATATCCGTGGAAGGGAAGCTTTACATTACCCTATACACAGCCGCACAATGTTACGAAAAATCAGGTCAGCCGACGACCGCCGGCTTCTCCAATTCTCTCAATCTTTCCAAATTCTTCATATCAAACACCGACAACGTGTTTGTCGCAGTAGGTTGTGACACCTATGCGTACATTGTGGGAAACAAAAATGGAAACTACGGGTACACTGGTGGGTGCACTACAATATGTGACAGCATTGACTACGTTGTCAATGGTTCCTGCACTGGTATCGGCTGTTGTAAAACACCCATTGCTCAAGGAATGACTTCTTTCGATGTAAGTGCAAGGAGTTATTATAATCATAAGAATGTGTCCTCCTTTAATCCTTGTAGCTTTGCCTTCGTTGTCCAAGAGGGCAAGTTCAACTTCAACCGCACTATGTTGTGGTCGGATTATTTGATAAATGCAAAACTTCCGGTGGTACTCGATTGGTCAGTTGGAAATGAGCCATGCACCAACGTTGTTGAGAAGAAACAAGTGATGAATTACACATGCCAGGGCAACACCACGTGTAATGATTTTGAGAATGGATACGGGTATCGCTGCAAGTGCAAGGACGGTTACCAAGGGAATCCATACCTAAATGACTGCTACGACACTGATGAATGTAAGGATCCAGACCTCAATACATGCAAGCAAAAATGTATAAATACGGAGGGAAACCATACTTGTTCTTGCCACAAGGGGTACTATGGTGATGGTAGAATAAAAGGAGAAGGTTGCACCCCTGATCCGACCTTTGTTATCCAAATTGTCGTTGGAATCGGCGTAGGCCTCGTGTCCCTATTAATGGGCAGCTCTTGGTTGTATTTGGGATACAAAAGATGGAAGCTCATGAAGCTAAAGGAAAAATTCTTCAAGCGAAATGGAGGAATCATGCTACAACAGCAACTTTCACAACGGCAAGGATCCTCTCATGAAACGGCAAAAATCTTCACGACAGGAGAACTTGAGAAGGCCACCAAAAATTATCATGAGACTAGAATCATTGGCAAAGGAGGGTTCGGTACAGTCTACAAAGGAATTTTAGCAGACGGCCGTGTAGTTGCAATCAAGAAGTCCAAAATGGTAGATCAGAGCCAGATAGAGCAATTCATAAATGAAGTGGTCGTACTTTCCCAAATCAACCACAGGAATGTGGTCAAGCTTTTAGGTTGTTGTTTTGAAACCGAAGTCCCCCTACTAGTTTATGAATTTGTCACCCATGGAACCCTATTTGAATACATCCATAACACAACCAAATCATCCAAATTCAACGCGCCTTGGGAAATTCGTCTACGTATAGCTACAGAAACTGCTGGAGTGCTATCATACTTGCACTCTGCAGCTTCTGTTCCTATCATTCACAGAGATGTCAAGTCTACAAATATACTCTTAGATGAGAATCTCACAGCCAAAGTGTCCGACTTTGGAGCCTCAAGATTGGTTCCGATTGGACACAGCTCAGTTATCTACAATGGTGCAAGGAACTCTCGGCACTCAAAGACGACTGCTTGCAGCAAGGTTCTTGATGATTGTATTGTGACTGAGGCAAACGTTGAGCAGCTTAAGGAAGTTTCTAACCTTGCAAAGAGGTGCTTGAGAGTAAAGGGAGAAGAAAGACCAACAATGAAGGAAGTTGCAATGGAACTGGAGGGGCTGAGAAGGATGGTCATGCATCCATGGGTTAATGATAATTCCAATTCAGAAGAAGCTGAATGCTTGCTTGGAGGAATATCAATGGAAACTATTAGTTATGAAGGAGGTGGCGAATCAAGTTCGGCGTTTCATAATACAAGGAACCACGTTGTATTACCAGTTAGTGATGGGAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

715

Amino Acids

78.83

Weight (kDa)

7.39

Isoelectric Point (pI)

33.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 46 - 103 2.7e-10 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 434 - 590 2e-31 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 437 - 586 2.6e-31 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 627
AasI GACNNNNNNGTC 1 cut(s) 536
AccI GTMKAC 3 cut(s) 1344, 1606, 1691
AccII CGCG 1 cut(s) 1589
AciI CCGC 3 cut(s) 333, 369, 703
AclI AACGTT 2 cut(s) 789, 1866
AclWI GGATC 5 cut(s) 938, 951, 1055, 1233, 1246
AcoI YGGCCR 1 cut(s) 1366
AcsI RAATTY 6 cut(s) 401, 1181, 1353, 1523, 1580, 1599
AcuI CTGAAG 1 cut(s) 45
AcvI CACGTG 1 cut(s) 840
AdeI CACNNNGTG 1 cut(s) 840
AfaI GTAC 8 cut(s) 42, 181, 461, 494, 753, 1019, 1339, 1443
AfiI CCNNNNNNNGG 3 cut(s) 110, 303, 1120
AflII CTTAAG 1 cut(s) 1877
AflIII ACRYGT 2 cut(s) 426, 839
AgsI TTSAA 7 cut(s) 281, 694, 700, 1189, 1496, 1550, 1585
AhlI ACTAGT 1 cut(s) 1513
AjnI CCWGG 1 cut(s) 825
AjuI GAANNNNNNNTTGG 2 cut(s) 2019, 2051
Alw21I GWGCWC 1 cut(s) 509
Alw26I GTCTC 1 cut(s) 1301
Alw44I GTGCAC 1 cut(s) 505
AlwI GGATC 5 cut(s) 938, 951, 1055, 1233, 1246
AlwNI CAGNNNCTG 2 cut(s) 1625, 1661
AoxI GGCC 3 cut(s) 1102, 1287, 1366
ApaLI GTGCAC 1 cut(s) 505
ApeKI GCWGC 7 cut(s) 50, 53, 873, 1125, 1655, 1827, 1873
ApoI RAATTY 6 cut(s) 401, 1181, 1353, 1523, 1580, 1599
ArsI GACNNNNNNTTYG 2 cut(s) 413, 445
AseI ATTAAT 1 cut(s) 1118
Asp700I GAANNNNTTC 1 cut(s) 595
AspLEI GCGC 1 cut(s) 1591
AsuC2I CCSGG 2 cut(s) 111, 132
AsuHPI GGTGA 2 cut(s) 1037, 1522
BaeGI GKGCMC 1 cut(s) 509
BaeI ACNNNNGTAYC 4 cut(s) 484, 517, 1009, 1042
BamHI GGATCC 2 cut(s) 943, 1238
BarI GAAGNNNNNNTAC 4 cut(s) 1425, 1457, 1494, 1526
BauI CACGAG 1 cut(s) 1106
BbrPI CACGTG 1 cut(s) 840
Bbv12I GWGCWC 1 cut(s) 509
BbvI GCAGC 7 cut(s) 62, 65, 860, 1137, 1667, 1839, 1885
BccI CCATC 4 cut(s) 1022, 1149, 1972, 2129
BceAI ACGGC 4 cut(s) 1247, 1269, 1353, 1381
BcgI CGANNNNNNTGC 4 cut(s) 541, 575, 593, 627
BciT130I CCWGG 1 cut(s) 827
BciVI GTATCC 2 cut(s) 854, 1139
BcnI CCSGG 2 cut(s) 111, 132
BcoDI GTCTC 1 cut(s) 1301
BcuI ACTAGT 1 cut(s) 1513
BfaI CTAG 2 cut(s) 1311, 1514
BfmI CTRYAG 2 cut(s) 1617, 1653
BfrI CTTAAG 1 cut(s) 1877
BfuI GTATCC 2 cut(s) 854, 1139
BisI GCNGC 8 cut(s) 51, 54, 333, 874, 1126, 1656, 1828, 1874
BlsI GCNGC 8 cut(s) 52, 55, 334, 875, 1127, 1657, 1829, 1875
Bme1390I CCNGG 3 cut(s) 111, 132, 827
BmiI GGNNCC 7 cut(s) 547, 945, 1240, 1540, 1744, 1758, 2111
BmrFI CCNGG 3 cut(s) 111, 132, 827
BmsI GCATC 2 cut(s) 171, 1996
BpmI CTGGAG 2 cut(s) 1650, 1982
BpuEI CTTGAG 4 cut(s) 570, 1301, 1732, 1930
BpuMI CCSGG 2 cut(s) 111, 132
BsaAI YACGTR 2 cut(s) 840, 1610
BsaBI GATNNNNATC 1 cut(s) 1713
BsaJI CCNNGG 6 cut(s) 297, 826, 895, 1534, 1592, 1991
BsaWI WCCGGW 1 cut(s) 745
Bsc4I CCNNNNNNNGG 3 cut(s) 110, 303, 1120
Bse118I RCCGGY 1 cut(s) 371
Bse1I ACTGG 4 cut(s) 502, 559, 1965, 2126
Bse3DI GCAATG 3 cut(s) 232, 579, 1959
Bse8I GATNNNNATC 1 cut(s) 1713
BseBI CCWGG 1 cut(s) 827
BseDI CCNNGG 6 cut(s) 297, 826, 895, 1534, 1592, 1991
BseGI GGATG 6 cut(s) 18, 162, 1554, 1574, 1983, 1987
BseJI GATNNNNATC 1 cut(s) 1713
BseLI CCNNNNNNNGG 3 cut(s) 110, 303, 1120
BseMI GCAATG 3 cut(s) 232, 579, 1959
BseMII CTCAG 3 cut(s) 1788, 1848, 1961
BseNI ACTGG 4 cut(s) 502, 559, 1965, 2126
BseRI GAGGAG 3 cut(s) 90, 93, 96
BseSI GKGCMC 1 cut(s) 509
BseX3I CGGCCG 1 cut(s) 1366
BseXI GCAGC 7 cut(s) 62, 65, 860, 1137, 1667, 1839, 1885
BsgI GTGCAG 1 cut(s) 535
Bsh1236I CGCG 1 cut(s) 1589
Bsh1285I CGRYCG 2 cut(s) 369, 1369
BshFI GGCC 3 cut(s) 1104, 1289, 1368
BsiEI CGRYCG 2 cut(s) 369, 1369
BsiHKAI GWGCWC 1 cut(s) 509
BsiSI CCGG 4 cut(s) 111, 131, 372, 746
BslFI GGGAC 2 cut(s) 1096, 1490
BslI CCNNNNNNNGG 3 cut(s) 110, 303, 1120
BsmAI GTCTC 1 cut(s) 1301
BsmFI GGGAC 2 cut(s) 1096, 1490
BsmI GAATGC 1 cut(s) 2033
BsnI GGCC 3 cut(s) 1104, 1289, 1368
Bsp1286I GDGCHC 1 cut(s) 509
Bsp143I GATC 4 cut(s) 943, 1060, 1238, 1402
Bsp19I CCATGG 2 cut(s) 1534, 1991
BspACI CCGC 3 cut(s) 333, 369, 703
BspANI GGCC 3 cut(s) 1104, 1289, 1368
BspCNI CTCAG 3 cut(s) 1787, 1849, 1962
BspFNI CGCG 1 cut(s) 1589
BspHI TCATGA 3 cut(s) 1164, 1246, 1303
BspLI GGNNCC 7 cut(s) 547, 945, 1240, 1540, 1744, 1758, 2111
BspMAI CTGCAG 1 cut(s) 1657
BspPI GGATC 5 cut(s) 938, 951, 1055, 1233, 1246
BspTI CTTAAG 1 cut(s) 1877
BsrDI GCAATG 3 cut(s) 232, 579, 1959
BsrFI RCCGGY 1 cut(s) 371
BsrI ACTGG 4 cut(s) 502, 559, 1965, 2126
BssAI RCCGGY 1 cut(s) 371
BssECI CCNNGG 6 cut(s) 297, 826, 895, 1534, 1592, 1991
BssMI GATC 4 cut(s) 943, 1060, 1238, 1402
BssSI CACGAG 1 cut(s) 1106
BssT1I CCWWGG 4 cut(s) 895, 1534, 1592, 1991
Bst2BI CACGAG 1 cut(s) 1106
Bst2UI CCWGG 1 cut(s) 827
Bst4CI ACNGT 2 cut(s) 890, 1342
Bst6I CTCTTC 1 cut(s) 96
BstAFI CTTAAG 1 cut(s) 1877
BstBAI YACGTR 2 cut(s) 840, 1610
BstC8I GCNNGC 4 cut(s) 373, 965, 1825, 2033
BstDEI CTNAG 5 cut(s) 260, 1705, 1774, 1857, 1970
BstDSI CCRYGG 3 cut(s) 297, 1534, 1991
BstEII GGTNACC 1 cut(s) 890
BstF5I GGATG 6 cut(s) 18, 162, 1554, 1574, 1983, 1987
BstFNI CGCG 1 cut(s) 1589
BstHHI GCGC 1 cut(s) 1591
BstKTI GATC 4 cut(s) 946, 1063, 1241, 1405
BstMAI GTCTC 1 cut(s) 1301
BstMBI GATC 4 cut(s) 943, 1060, 1238, 1402
BstMCI CGRYCG 2 cut(s) 369, 1369
BstMWI GCNNNNNNNGC 4 cut(s) 62, 879, 1168, 1216
BstNI CCWGG 1 cut(s) 827
BstNSI RCATGY 2 cut(s) 825, 963
BstPI GGTNACC 1 cut(s) 890
BstSCI CCNGG 3 cut(s) 109, 130, 825
BstSFI CTRYAG 2 cut(s) 1617, 1653
BstSLI GKGCMC 1 cut(s) 509
BstSNI TACGTA 1 cut(s) 1610
BstUI CGCG 1 cut(s) 1589
BstV1I GCAGC 7 cut(s) 62, 65, 860, 1137, 1667, 1839, 1885
BstX2I RGATCY 2 cut(s) 943, 1238
BstYI RGATCY 2 cut(s) 943, 1238
BstZI CGGCCG 1 cut(s) 1366
BsuI GTATCC 2 cut(s) 854, 1139
BsuRI GGCC 3 cut(s) 1104, 1289, 1368
BtgI CCRYGG 3 cut(s) 297, 1534, 1991
BtsCI GGATG 6 cut(s) 18, 162, 1554, 1574, 1983, 1987
BtsIMutI CAGTG 3 cut(s) 495, 552, 927
Cac8I GCNNGC 4 cut(s) 373, 965, 1825, 2033
CaiI CAGNNNCTG 2 cut(s) 1625, 1661
CciI TCATGA 3 cut(s) 1164, 1246, 1303
CfoI GCGC 1 cut(s) 1591
Cfr10I RCCGGY 1 cut(s) 371
Csp6I GTAC 8 cut(s) 41, 180, 460, 493, 752, 1018, 1338, 1442
CviQI GTAC 8 cut(s) 41, 180, 460, 493, 752, 1018, 1338, 1442
DdeI CTNAG 5 cut(s) 260, 1705, 1774, 1857, 1970
DpnI GATC 4 cut(s) 945, 1062, 1240, 1404
DpnII GATC 4 cut(s) 943, 1060, 1238, 1402
DraIII CACNNNGTG 1 cut(s) 840
DrdI GACNNNNNNGTC 1 cut(s) 536
DseDI GACNNNNNNGTC 1 cut(s) 536
EaeI YGGCCR 1 cut(s) 1366
EagI CGGCCG 1 cut(s) 1366
Eam1104I CTCTTC 1 cut(s) 96
EarI CTCTTC 1 cut(s) 96
EclXI CGGCCG 1 cut(s) 1366
Eco105I TACGTA 1 cut(s) 1610
Eco130I CCWWGG 4 cut(s) 895, 1534, 1592, 1991
Eco147I AGGCCT 1 cut(s) 1104
Eco52I CGGCCG 1 cut(s) 1366
Eco57I CTGAAG 1 cut(s) 45
Eco72I CACGTG 1 cut(s) 840
Eco91I GGTNACC 1 cut(s) 890
EcoO65I GGTNACC 1 cut(s) 890
EcoRII CCWGG 1 cut(s) 825
EcoT14I CCWWGG 4 cut(s) 895, 1534, 1592, 1991
EcoT22I ATGCAT 1 cut(s) 1989
ErhI CCWWGG 4 cut(s) 895, 1534, 1592, 1991
FalI AAGNNNNNCTT 6 cut(s) 294, 326, 680, 712, 1892, 1924
FaqI GGGAC 2 cut(s) 1096, 1490
FblI GTMKAC 3 cut(s) 1344, 1606, 1691
Fnu4HI GCNGC 8 cut(s) 51, 54, 333, 874, 1126, 1656, 1828, 1874
FokI GGATG 6 cut(s) 5, 149, 1541, 1561, 1974, 1990
Fsp4HI GCNGC 8 cut(s) 51, 54, 333, 874, 1126, 1656, 1828, 1874
FspBI CTAG 2 cut(s) 1311, 1514
GlaI GCGC 1 cut(s) 1590
GluI GCNGC 8 cut(s) 51, 54, 333, 874, 1126, 1656, 1828, 1874
GsuI CTGGAG 2 cut(s) 1650, 1982
HaeIII GGCC 3 cut(s) 1104, 1289, 1368
HapII CCGG 4 cut(s) 111, 131, 372, 746
HhaI GCGC 1 cut(s) 1591
Hin6I GCGC 1 cut(s) 1589
HinP1I GCGC 1 cut(s) 1589
HindIII AAGCTT 2 cut(s) 308, 1475
HinfI GANTC 7 cut(s) 272, 901, 1092, 1203, 1314, 1714, 2081
HpaII CCGG 4 cut(s) 111, 131, 372, 746
HphI GGTGA 2 cut(s) 1037, 1522
Hpy166II GTNNAC 5 cut(s) 495, 507, 1345, 1607, 1692
Hpy188I TCNGA 6 cut(s) 721, 1065, 1407, 1735, 1761, 2017
Hpy8I GTNNAC 5 cut(s) 495, 507, 1345, 1607, 1692
Hpy99I CGWCG 1 cut(s) 367
HpyAV CCTTC 8 cut(s) 105, 296, 679, 1040, 1279, 1936, 1968, 2063
HpyCH4III ACNGT 2 cut(s) 890, 1342
HpyCH4IV ACGT 7 cut(s) 426, 534, 789, 839, 1609, 1866, 2115
HpyF10VI GCNNNNNNNGC 4 cut(s) 62, 879, 1168, 1216
HpyF3I CTNAG 5 cut(s) 260, 1705, 1774, 1857, 1970
HpySE526I ACGT 7 cut(s) 426, 534, 789, 839, 1609, 1866, 2115
HspAI GCGC 1 cut(s) 1589
KroI GCCGGC 1 cut(s) 371
KroNI GCCGGC 1 cut(s) 373
Kzo9I GATC 4 cut(s) 943, 1060, 1238, 1402
LmnI GCTCC 1 cut(s) 1742
Lsp1109I GCAGC 7 cut(s) 62, 65, 860, 1137, 1667, 1839, 1885
LweI GCATC 2 cut(s) 171, 1996
MaeI CTAG 2 cut(s) 1311, 1514
MaeII ACGT 7 cut(s) 426, 534, 789, 839, 1609, 1866, 2115
MaeIII GTNAC 9 cut(s) 31, 194, 283, 341, 446, 518, 890, 1528, 1852
MalI GATC 4 cut(s) 945, 1062, 1240, 1404
MboI GATC 4 cut(s) 943, 1060, 1238, 1402
MboII GAAGA 7 cut(s) 83, 397, 811, 1177, 1255, 1937, 2030
MflI RGATCY 2 cut(s) 943, 1238
MhlI GDGCHC 1 cut(s) 509
MmeI TCCRAC 5 cut(s) 699, 748, 1069, 1088, 1758
Mph1103I ATGCAT 1 cut(s) 1989
MroNI GCCGGC 1 cut(s) 371
MroXI GAANNNNTTC 1 cut(s) 595
MseI TTAA 6 cut(s) 77, 200, 651, 1118, 1878, 1998
MslI CAYNNNNRTG 4 cut(s) 296, 636, 1464, 1680
MspCI CTTAAG 1 cut(s) 1877
MspI CCGG 4 cut(s) 111, 131, 372, 746
MspR9I CCNGG 3 cut(s) 111, 132, 827
Mva1269I GAATGC 1 cut(s) 2033
MvaI CCWGG 1 cut(s) 827
MvnI CGCG 1 cut(s) 1589
MwoI GCNNNNNNNGC 4 cut(s) 62, 879, 1168, 1216
NaeI GCCGGC 1 cut(s) 373
NciI CCSGG 2 cut(s) 111, 132
NcoI CCATGG 2 cut(s) 1534, 1991
NdeII GATC 4 cut(s) 943, 1060, 1238, 1402
NgoMIV GCCGGC 1 cut(s) 371
NlaIV GGNNCC 7 cut(s) 547, 945, 1240, 1540, 1744, 1758, 2111
NmeAIII GCCGAG 1 cut(s) 1783
NmuCI GTSAC 5 cut(s) 283, 446, 518, 1528, 1852
NsiI ATGCAT 1 cut(s) 1989
NspI RCATGY 2 cut(s) 825, 963
PagI TCATGA 3 cut(s) 1164, 1246, 1303
PceI AGGCCT 1 cut(s) 1104
PctI GAATGC 1 cut(s) 2033
PdiI GCCGGC 1 cut(s) 373
PdmI GAANNNNTTC 1 cut(s) 595
PfeI GAWTC 7 cut(s) 272, 901, 1092, 1203, 1314, 1714, 2081
PkrI GCNGC 8 cut(s) 52, 55, 334, 875, 1127, 1657, 1829, 1875
PmaCI CACGTG 1 cut(s) 840
PmlI CACGTG 1 cut(s) 840
Ppu21I YACGTR 2 cut(s) 840, 1610
PshBI ATTAAT 1 cut(s) 1118
PsiI TTATAA 1 cut(s) 627
Psp1406I AACGTT 2 cut(s) 789, 1866
Psp6I CCWGG 1 cut(s) 825
PspCI CACGTG 1 cut(s) 840
PspEI GGTNACC 1 cut(s) 890
PspGI CCWGG 1 cut(s) 825
PspN4I GGNNCC 7 cut(s) 547, 945, 1240, 1540, 1744, 1758, 2111
PstI CTGCAG 1 cut(s) 1657
PstNI CAGNNNCTG 2 cut(s) 1625, 1661
PsuI RGATCY 2 cut(s) 943, 1238
RsaI GTAC 8 cut(s) 42, 181, 461, 494, 753, 1019, 1339, 1443
RsaNI GTAC 8 cut(s) 41, 180, 460, 493, 752, 1018, 1338, 1442
RseI CAYNNNNRTG 4 cut(s) 296, 636, 1464, 1680
SaqAI TTAA 6 cut(s) 77, 200, 651, 1118, 1878, 1998
SatI GCNGC 8 cut(s) 51, 54, 333, 874, 1126, 1656, 1828, 1874
Sau3AI GATC 4 cut(s) 943, 1060, 1238, 1402
ScrFI CCNGG 3 cut(s) 111, 132, 827
SduI GDGCHC 1 cut(s) 509
SfaNI GCATC 2 cut(s) 171, 1996
SfcI CTRYAG 2 cut(s) 1617, 1653
SmiMI CAYNNNNRTG 4 cut(s) 296, 636, 1464, 1680
SmlI CTYRAG 5 cut(s) 585, 1280, 1747, 1877, 1909
SmoI CTYRAG 5 cut(s) 585, 1280, 1747, 1877, 1909
SnaBI TACGTA 1 cut(s) 1610
SpeI ACTAGT 1 cut(s) 1513
SseBI AGGCCT 1 cut(s) 1104
SsiI CCGC 3 cut(s) 333, 369, 703
SspMI CTAG 2 cut(s) 1311, 1514
StuI AGGCCT 1 cut(s) 1104
StyD4I CCNGG 3 cut(s) 109, 130, 825
StyI CCWWGG 4 cut(s) 895, 1534, 1592, 1991
TaaI ACNGT 2 cut(s) 890, 1342
TaiI ACGT 7 cut(s) 429, 537, 792, 842, 1612, 1869, 2118
TaqI TCGA 3 cut(s) 275, 603, 756
TauI GCSGC 1 cut(s) 335
TfiI GAWTC 7 cut(s) 272, 901, 1092, 1203, 1314, 1714, 2081
Tru1I TTAA 6 cut(s) 77, 200, 651, 1118, 1878, 1998
Tru9I TTAA 6 cut(s) 77, 200, 651, 1118, 1878, 1998
TscAI CASTG 3 cut(s) 502, 559, 934
TseFI GTSAC 5 cut(s) 283, 446, 518, 1528, 1852
TseI GCWGC 7 cut(s) 50, 53, 873, 1125, 1655, 1827, 1873
Tsp45I GTSAC 5 cut(s) 283, 446, 518, 1528, 1852
TspGWI ACGGA 2 cut(s) 286, 998
TspRI CASTG 3 cut(s) 502, 559, 934
Vha464I CTTAAG 1 cut(s) 1877
VneI GTGCAC 1 cut(s) 505
VspI ATTAAT 1 cut(s) 1118
XapI RAATTY 6 cut(s) 401, 1181, 1353, 1523, 1580, 1599
XceI RCATGY 2 cut(s) 825, 963
XcmI CCANNNNNNNNNTGG 1 cut(s) 1085
XmiI GTMKAC 3 cut(s) 1344, 1606, 1691
XmnI GAANNNNTTC 1 cut(s) 595
XspI CTAG 2 cut(s) 1311, 1514
Zsp2I ATGCAT 1 cut(s) 1989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.