Rw0G014820

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00660
OG0000066
Physical Location & Seq
Reverse (-)
14930 .. 18300
3371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G014820.1

Sequence Viewer

Length: 1461 bp
ATGGCGTTGCGACTTTCATTGGTGGCAGTCCTACTCCTGTTATTGGCGGCTAGTTCTACTACGACAACAGCAGCTGCTGCTCAAGCCCTCCCTGGTTGCTCAGACAAGTGCGGCAATCTCACAATCCCATATCCATTTGGCATGAAGAAGGGTTGTTACCTGCGAAAAGAATTCTTTATCAATTGCGACCAGACGACCCAACCACCAACGGCATATTTGATGAAAGGGCATCTCATTGTTACTAAAATATACCTAGACGTTGGGGAGTTGCAAATATTGAACAGTGTAGGGCAAGATTGTTACGATAAAGAGCGCAATCCAACAGGTAGTCCAAATATACAAAAGCTCTGGTTGGTACCTCCGTACACCATATCTGATTCCAAAAACAAGTTCTACGCCGTTGGTTGTGACACTTACGCAACCATGGAAGGCTTCCGAGAGGGAAAAAAATTCGTTACTGGGTGCGTGTCAGTATGTTACAGCCTTGACAATGTTGATAAGAACTCTTGCTCTGGCGCTGGGTGTTGCCAGACTAACATCCCCAGTGGACTGCACAATCGTACTAGTGAGCAATTTGTCAACGAGGTAATCGTTCTTTCTCAAATCAACCACAGAAATGTTGTGAAGCTTTTAGGTTGTTGTTTAGAAACAGAAGTACCTATACTTGTATACGAGTTCATCAGCCATGGAACTCTTTATGAGCACATTCATAAGAAAAGATCATCACTCTCATTTGAATTACGAATGAAGATAGCAGCTGAAACAGCAGGAGCATTAGCCCATTTACACTCCTCAATTTCCACACCAGTCATACATCGAGATGTCAAAGCAGCGAATATTTTGTTAGATGATAAGTATACAGCGAAAGTGTCAGATTTTGGAGCTTCACGTTTCATTCCTATTGATGAAACTCAACTAGCAACATTAGTGCAAGGGACGTTTGGATACTTGGACCCTGAATACTACCATTCAAATCAACTAACAGGAAAAAGTGACGTCTATAGCTTTGGAGTGGTACTAGCAGAGCTACTCACAGGTAAAGTGGCACTTTCTTTTGCAAGGCCTGAGGCAGAGAGATGCCTTGCACACTTTTTTGTTTGTTCGATGGAAGACGGTTACTTGAACCAAATTCTATATGATGACATTGTTAATGAGGGAGATATTGACCAGAAAGTAATAGAAAATGTGGCCAATCTTGCAAGAAGATGTTTGAGGGTAAAAGGGGAGGAAAGGCCTACCATGAGAGAAGTAGCCATGGAGCTGGAAGGAATGATTATGACAAAGCATCCATGGGGTTCTGCAGATCATTACTTTCCAGAAGAGACTACGCACTTGCTGGGATCATTTACTACTTCCAAGGATTACTCTGTGAATGTTGAAGGTGATGGTGGCCCTGGTACTGCCAGTGGGTCTAGCATGCAAATAGACATGTCAATGTCTTCATATGCTTATGGGCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

486

Amino Acids

53.55

Weight (kDa)

5.8

Isoelectric Point (pI)

34.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 33 - 92 2.1e-09 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 185 - 421 3e-40 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 187 - 417 9.1e-38 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 999
Acc36I ACCTGC 1 cut(s) 168
Acc65I GGTACC 1 cut(s) 355
AccB1I GGYRCC 1 cut(s) 355
AccI GTMKAC 2 cut(s) 669, 857
AciI CCGC 2 cut(s) 47, 111
AclWI GGATC 1 cut(s) 1348
AcoI YGGCCR 1 cut(s) 1188
AcsI RAATTY 3 cut(s) 170, 449, 1128
AcyI GRCGYC 1 cut(s) 996
AfaI GTAC 6 cut(s) 357, 365, 562, 657, 1017, 1399
AfiI CCNNNNNNNGG 1 cut(s) 43
AflIII ACRYGT 1 cut(s) 1428
AgsI TTSAA 5 cut(s) 280, 737, 972, 1123, 1379
AhlI ACTAGT 1 cut(s) 563
AjnI CCWGG 2 cut(s) 91, 1393
AjuI GAANNNNNNNTTGG 2 cut(s) 374, 406
AluBI AGCT 8 cut(s) 74, 346, 628, 758, 884, 1005, 1027, 1261
AluI AGCT 8 cut(s) 74, 346, 628, 758, 884, 1005, 1027, 1261
Alw21I GWGCWC 1 cut(s) 705
Alw26I GTCTC 1 cut(s) 1316
AlwI GGATC 1 cut(s) 1348
AlwNI CAGNNNCTG 2 cut(s) 74, 77
AoxI GGCC 4 cut(s) 1061, 1188, 1232, 1390
ApeKI GCWGC 5 cut(s) 71, 74, 77, 755, 830
ApoI RAATTY 3 cut(s) 170, 449, 1128
Asp718I GGTACC 1 cut(s) 355
AspLEI GCGC 2 cut(s) 315, 518
AspS9I GGNCC 2 cut(s) 952, 1391
AsuHPI GGTGA 1 cut(s) 1394
AvaII GGWCC 1 cut(s) 952
AxyI CCTNAGG 1 cut(s) 1065
BaeI ACNNNNGTAYC 4 cut(s) 347, 380, 639, 672
BalI TGGCCA 1 cut(s) 1190
BanI GGYRCC 1 cut(s) 355
BarI GAAGNNNNNNTAC 4 cut(s) 140, 172, 645, 677
BbsI GAAGAC 2 cut(s) 1116, 1431
Bbv12I GWGCWC 1 cut(s) 705
BbvI GCAGC 5 cut(s) 61, 64, 83, 767, 842
BccI CCATC 2 cut(s) 1099, 1379
BceAI ACGGC 2 cut(s) 225, 383
BciT130I CCWGG 2 cut(s) 93, 1395
BciVI GTATCC 1 cut(s) 938
BcoDI GTCTC 1 cut(s) 1316
BcuI ACTAGT 1 cut(s) 563
BfaI CTAG 6 cut(s) 51, 254, 564, 917, 1019, 1413
BfmI CTRYAG 2 cut(s) 1000, 1299
BfoI RGCGCY 1 cut(s) 519
BfuAI ACCTGC 1 cut(s) 168
BfuI GTATCC 1 cut(s) 938
BisI GCNGC 7 cut(s) 48, 72, 75, 78, 112, 756, 831
BlsI GCNGC 7 cut(s) 49, 73, 76, 79, 113, 757, 832
Bme1390I CCNGG 2 cut(s) 93, 1395
Bme18I GGWCC 1 cut(s) 952
BmgT120I GGNCC 2 cut(s) 952, 1391
BmiI GGNNCC 2 cut(s) 357, 954
BmrFI CCNGG 2 cut(s) 93, 1395
BmrI ACTGGG 2 cut(s) 468, 537
BmsI GCATC 3 cut(s) 238, 1067, 1294
BmuI ACTGGG 2 cut(s) 468, 537
BpiI GAAGAC 2 cut(s) 1116, 1431
BpuEI CTTGAG 1 cut(s) 66
BsaHI GRCGYC 1 cut(s) 996
BsaJI CCNNGG 7 cut(s) 91, 423, 685, 1254, 1289, 1356, 1393
Bsc4I CCNNNNNNNGG 1 cut(s) 43
Bse1I ACTGG 4 cut(s) 463, 543, 806, 1404
Bse21I CCTNAGG 1 cut(s) 1065
BseBI CCWGG 2 cut(s) 93, 1395
BseDI CCNNGG 7 cut(s) 91, 423, 685, 1254, 1289, 1356, 1393
BseGI GGATG 2 cut(s) 537, 1285
BseLI CCNNNNNNNGG 1 cut(s) 43
BseMII CTCAG 2 cut(s) 114, 1056
BseNI ACTGG 4 cut(s) 463, 543, 806, 1404
BseRI GAGGAG 1 cut(s) 781
BseXI GCAGC 5 cut(s) 61, 64, 83, 767, 842
BseYI CCCAGC 2 cut(s) 518, 1336
BsgI GTGCAG 1 cut(s) 536
BshFI GGCC 4 cut(s) 1063, 1190, 1234, 1392
BshNI GGYRCC 1 cut(s) 355
BsiHKAI GWGCWC 1 cut(s) 705
BslFI GGGAC 1 cut(s) 949
BslI CCNNNNNNNGG 1 cut(s) 43
BsmAI GTCTC 1 cut(s) 1316
BsmFI GGGAC 1 cut(s) 949
BsnI GGCC 4 cut(s) 1063, 1190, 1234, 1392
Bsp1286I GDGCHC 1 cut(s) 705
Bsp143I GATC 3 cut(s) 719, 1303, 1340
Bsp19I CCATGG 4 cut(s) 423, 685, 1254, 1289
BspACI CCGC 2 cut(s) 47, 111
BspANI GGCC 4 cut(s) 1063, 1190, 1234, 1392
BspCNI CTCAG 2 cut(s) 113, 1057
BspLI GGNNCC 2 cut(s) 357, 954
BspMAI CTGCAG 1 cut(s) 1303
BspMI ACCTGC 1 cut(s) 168
BspPI GGATC 1 cut(s) 1348
BspT107I GGYRCC 1 cut(s) 355
BsrI ACTGG 4 cut(s) 463, 543, 806, 1404
BssECI CCNNGG 7 cut(s) 91, 423, 685, 1254, 1289, 1356, 1393
BssMI GATC 3 cut(s) 719, 1303, 1340
BssNAI GTATAC 2 cut(s) 670, 858
BssNI GRCGYC 1 cut(s) 996
BssT1I CCWWGG 5 cut(s) 423, 685, 1254, 1289, 1356
Bst1107I GTATAC 2 cut(s) 670, 858
Bst2UI CCWGG 2 cut(s) 93, 1395
Bst4CI ACNGT 2 cut(s) 284, 1115
Bst6I CTCTTC 1 cut(s) 1314
BstACI GRCGYC 1 cut(s) 996
BstAPI GCANNNNNTGC 1 cut(s) 77
BstC8I GCNNGC 1 cut(s) 1418
BstDEI CTNAG 2 cut(s) 100, 1065
BstDSI CCRYGG 4 cut(s) 423, 685, 1254, 1289
BstF5I GGATG 2 cut(s) 537, 1285
BstH2I RGCGCY 1 cut(s) 519
BstHHI GCGC 2 cut(s) 315, 518
BstKTI GATC 3 cut(s) 722, 1306, 1343
BstMAI GTCTC 1 cut(s) 1316
BstMBI GATC 3 cut(s) 719, 1303, 1340
BstMWI GCNNNNNNNGC 4 cut(s) 77, 83, 764, 1196
BstNI CCWGG 2 cut(s) 93, 1395
BstNSI RCATGY 2 cut(s) 1420, 1432
BstSCI CCNGG 2 cut(s) 91, 1393
BstSFI CTRYAG 2 cut(s) 1000, 1299
BstV1I GCAGC 5 cut(s) 61, 64, 83, 767, 842
BstV2I GAAGAC 2 cut(s) 1116, 1431
BstXI CCANNNNNNTGG 1 cut(s) 1261
BstZ17I GTATAC 2 cut(s) 670, 858
Bsu36I CCTNAGG 1 cut(s) 1065
BsuI GTATCC 1 cut(s) 938
BsuRI GGCC 4 cut(s) 1063, 1190, 1234, 1392
BtgI CCRYGG 4 cut(s) 423, 685, 1254, 1289
BtsCI GGATG 2 cut(s) 537, 1285
BtsIMutI CAGTG 3 cut(s) 289, 550, 1411
BveI ACCTGC 1 cut(s) 168
Cac8I GCNNGC 1 cut(s) 1418
CaiI CAGNNNCTG 2 cut(s) 74, 77
CfoI GCGC 2 cut(s) 315, 518
Cfr13I GGNCC 2 cut(s) 952, 1391
Csp6I GTAC 6 cut(s) 356, 364, 561, 656, 1016, 1398
CviAII CATG 8 cut(s) 142, 424, 686, 1240, 1255, 1290, 1417, 1429
CviQI GTAC 6 cut(s) 356, 364, 561, 656, 1016, 1398
DdeI CTNAG 2 cut(s) 100, 1065
DpnI GATC 3 cut(s) 721, 1305, 1342
DpnII GATC 3 cut(s) 719, 1303, 1340
EaeI YGGCCR 1 cut(s) 1188
Eam1104I CTCTTC 1 cut(s) 1314
EarI CTCTTC 1 cut(s) 1314
Eco130I CCWWGG 5 cut(s) 423, 685, 1254, 1289, 1356
Eco147I AGGCCT 2 cut(s) 1063, 1234
Eco47I GGWCC 1 cut(s) 952
Eco81I CCTNAGG 1 cut(s) 1065
EcoRI GAATTC 1 cut(s) 170
EcoRII CCWGG 2 cut(s) 91, 1393
EcoT14I CCWWGG 5 cut(s) 423, 685, 1254, 1289, 1356
ErhI CCWWGG 5 cut(s) 423, 685, 1254, 1289, 1356
FaeI CATG 8 cut(s) 145, 427, 689, 1243, 1258, 1293, 1420, 1432
FalI AAGNNNNNCTT 2 cut(s) 1032, 1064
FaqI GGGAC 1 cut(s) 949
FatI CATG 8 cut(s) 141, 423, 685, 1239, 1254, 1289, 1416, 1428
FauNDI CATATG 1 cut(s) 1444
FblI GTMKAC 2 cut(s) 669, 857
Fnu4HI GCNGC 7 cut(s) 48, 72, 75, 78, 112, 756, 831
FokI GGATG 2 cut(s) 524, 1272
Fsp4HI GCNGC 7 cut(s) 48, 72, 75, 78, 112, 756, 831
FspBI CTAG 6 cut(s) 51, 254, 564, 917, 1019, 1413
GlaI GCGC 2 cut(s) 314, 517
GluI GCNGC 7 cut(s) 48, 72, 75, 78, 112, 756, 831
GsaI CCCAGC 2 cut(s) 522, 1340
HaeII RGCGCY 1 cut(s) 519
HaeIII GGCC 4 cut(s) 1063, 1190, 1234, 1392
HhaI GCGC 2 cut(s) 315, 518
Hin1I GRCGYC 1 cut(s) 996
Hin1II CATG 8 cut(s) 145, 427, 689, 1243, 1258, 1293, 1420, 1432
Hin6I GCGC 2 cut(s) 313, 516
HinP1I GCGC 2 cut(s) 313, 516
HincII GTYRAC 1 cut(s) 580
HindII GTYRAC 1 cut(s) 580
HindIII AAGCTT 1 cut(s) 626
HinfI GANTC 1 cut(s) 377
HphI GGTGA 1 cut(s) 1394
Hpy166II GTNNAC 5 cut(s) 366, 548, 580, 670, 858
Hpy188I TCNGA 4 cut(s) 103, 376, 437, 874
Hpy188III TCNNGA 2 cut(s) 818, 1316
Hpy8I GTNNAC 5 cut(s) 366, 548, 580, 670, 858
HpyAV CCTTC 4 cut(s) 142, 422, 1259, 1373
HpyCH4III ACNGT 2 cut(s) 284, 1115
HpyCH4IV ACGT 4 cut(s) 258, 889, 938, 996
HpyCH4V TGCA 8 cut(s) 271, 553, 931, 1058, 1085, 1199, 1301, 1420
HpyF10VI GCNNNNNNNGC 4 cut(s) 77, 83, 764, 1196
HpyF3I CTNAG 2 cut(s) 100, 1065
HpySE526I ACGT 4 cut(s) 258, 889, 938, 996
Hsp92I GRCGYC 1 cut(s) 996
Hsp92II CATG 8 cut(s) 145, 427, 689, 1243, 1258, 1293, 1420, 1432
HspAI GCGC 2 cut(s) 313, 516
KpnI GGTACC 1 cut(s) 359
Kzo9I GATC 3 cut(s) 719, 1303, 1340
LmnI GCTCC 3 cut(s) 770, 881, 1258
Lsp1109I GCAGC 5 cut(s) 61, 64, 83, 767, 842
LweI GCATC 3 cut(s) 238, 1067, 1294
MaeI CTAG 6 cut(s) 51, 254, 564, 917, 1019, 1413
MaeII ACGT 4 cut(s) 258, 889, 938, 996
MaeIII GTNAC 8 cut(s) 155, 238, 299, 407, 454, 476, 992, 1115
MalI GATC 3 cut(s) 721, 1305, 1342
MboI GATC 3 cut(s) 719, 1303, 1340
MboII GAAGA 6 cut(s) 157, 760, 1121, 1215, 1331, 1431
MfeI CAATTG 1 cut(s) 181
MhlI GDGCHC 1 cut(s) 705
MlsI TGGCCA 1 cut(s) 1190
MluCI AATT 7 cut(s) 170, 181, 449, 572, 737, 795, 1128
MluNI TGGCCA 1 cut(s) 1190
MmeI TCCRAC 1 cut(s) 344
MnlI CCTC 9 cut(s) 98, 369, 433, 577, 802, 1060, 1147, 1206, 1219
Mox20I TGGCCA 1 cut(s) 1190
MscI TGGCCA 1 cut(s) 1190
MseI TTAA 1 cut(s) 1149
MslI CAYNNNNRTG 3 cut(s) 615, 819, 1433
Msp20I TGGCCA 1 cut(s) 1190
MspA1I CMGCKG 2 cut(s) 74, 758
MspR9I CCNGG 2 cut(s) 93, 1395
MunI CAATTG 1 cut(s) 181
MvaI CCWGG 2 cut(s) 93, 1395
MwoI GCNNNNNNNGC 4 cut(s) 77, 83, 764, 1196
NcoI CCATGG 4 cut(s) 423, 685, 1254, 1289
NdeI CATATG 1 cut(s) 1444
NdeII GATC 3 cut(s) 719, 1303, 1340
NlaIII CATG 8 cut(s) 145, 427, 689, 1243, 1258, 1293, 1420, 1432
NlaIV GGNNCC 2 cut(s) 357, 954
NmuCI GTSAC 2 cut(s) 407, 992
NspI RCATGY 2 cut(s) 1420, 1432
PaeI GCATGC 1 cut(s) 1420
PceI AGGCCT 2 cut(s) 1063, 1234
PciI ACATGT 1 cut(s) 1428
PcsI WCGNNNNNNNCGW 1 cut(s) 588
PfeI GAWTC 1 cut(s) 377
PkrI GCNGC 7 cut(s) 49, 73, 76, 79, 113, 757, 832
PscI ACATGT 1 cut(s) 1428
Psp6I CCWGG 2 cut(s) 91, 1393
PspFI CCCAGC 2 cut(s) 518, 1336
PspGI CCWGG 2 cut(s) 91, 1393
PspN4I GGNNCC 2 cut(s) 357, 954
PspPI GGNCC 2 cut(s) 952, 1391
PstI CTGCAG 1 cut(s) 1303
PstNI CAGNNNCTG 2 cut(s) 74, 77
PvuII CAGCTG 2 cut(s) 74, 758
RsaI GTAC 6 cut(s) 357, 365, 562, 657, 1017, 1399
RsaNI GTAC 6 cut(s) 356, 364, 561, 656, 1016, 1398
RseI CAYNNNNRTG 3 cut(s) 615, 819, 1433
SaqAI TTAA 1 cut(s) 1149
SatI GCNGC 7 cut(s) 48, 72, 75, 78, 112, 756, 831
Sau3AI GATC 3 cut(s) 719, 1303, 1340
Sau96I GGNCC 2 cut(s) 952, 1391
ScrFI CCNGG 2 cut(s) 93, 1395
SduI GDGCHC 1 cut(s) 705
SfaNI GCATC 3 cut(s) 238, 1067, 1294
SfcI CTRYAG 2 cut(s) 1000, 1299
SinI GGWCC 1 cut(s) 952
SmiMI CAYNNNNRTG 3 cut(s) 615, 819, 1433
SmlI CTYRAG 1 cut(s) 81
SmoI CTYRAG 1 cut(s) 81
SpeI ACTAGT 1 cut(s) 563
SphI GCATGC 1 cut(s) 1420
Sse9I AATT 7 cut(s) 170, 181, 449, 572, 737, 795, 1128
SseBI AGGCCT 2 cut(s) 1063, 1234
SsiI CCGC 2 cut(s) 47, 111
SspI AATATT 2 cut(s) 276, 838
SspMI CTAG 6 cut(s) 51, 254, 564, 917, 1019, 1413
StuI AGGCCT 2 cut(s) 1063, 1234
StyD4I CCNGG 2 cut(s) 91, 1393
StyI CCWWGG 5 cut(s) 423, 685, 1254, 1289, 1356
TaaI ACNGT 2 cut(s) 284, 1115
TaiI ACGT 4 cut(s) 261, 892, 941, 999
TaqI TCGA 2 cut(s) 817, 1103
TasI AATT 7 cut(s) 170, 181, 449, 572, 737, 795, 1128
TauI GCSGC 2 cut(s) 50, 114
TfiI GAWTC 1 cut(s) 377
Tru1I TTAA 1 cut(s) 1149
Tru9I TTAA 1 cut(s) 1149
TscAI CASTG 3 cut(s) 289, 550, 1411
TseFI GTSAC 2 cut(s) 407, 992
TseI GCWGC 5 cut(s) 71, 74, 77, 755, 830
Tsp45I GTSAC 2 cut(s) 407, 992
TspDTI ATGAA 9 cut(s) 6, 158, 236, 667, 698, 761, 883, 921, 1431
TspGWI ACGGA 1 cut(s) 351
TspRI CASTG 3 cut(s) 289, 550, 1411
VpaK11BI GGWCC 1 cut(s) 952
XapI RAATTY 3 cut(s) 170, 449, 1128
XceI RCATGY 2 cut(s) 1420, 1432
XmiI GTMKAC 2 cut(s) 669, 857
XspI CTAG 6 cut(s) 51, 254, 564, 917, 1019, 1413
ZraI GACGTC 1 cut(s) 997
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.