Rroxscaffold_7G00206550

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000066
Physical Location & Seq
Reverse (-)
56355555 .. 56358951
3397 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00206550.1

Sequence Viewer

Length: 1371 bp
ATGTCTGTGTGCACCACCCTTGGCGGTGTCGATTGGGAGTCTTGCACTGGCGTCGGCTGTTGCCAAACTCAAGTCCCGCATGGACTGAAAAACCGCACCGTGACATTGAGTAGCTATAACGGCCACAAGGAGATATGGAGCTTTAACCCTTGCAGTTACGCTTTTATTGTGCAAGATGGCCTCTTCACATTTAATACTACGAGTTTTGAACTACTGAACAACATCCAGGAGCTTCCCATGGTACTTAACTGGGATATGGGAAACGTGCCATGCGAGGTAGCTGGAAAGAGAAGTACGGATTATGCATGCAAGGCTAATAGCAAGTGTGCTAATCGGAGAAATTTCACCGGCGGCAATGGTTACTATTGCCAGTGCTTGCCTGGCTACGAAGGAAACCCATATCTCGGTTGCCAAGATATTGACGAGTGCTCGGCTGAAACTAACCCCTGCGAGAATGGAACATGCCTAAATTCACCTGCTGGCAATTACTCTTGTAAATGTCATAAAGGGTTCAGGAGTGATGGTCCATGGAAGTGCGTTCCCTCTCCCAAAGTTAACAACACTTCCTTGAAAATTTTATTGGGTATCAGCATAAGCTTCTTTGTATTGATGACTGGAATCTTTGGGATATATTGCGGATTCAAGAGACGACAATTCGAAAGACTTAAAGCAAAGTACTTCGATGCAAATGGCGGCCCAAAGTTGCTTGAAAAATTGTCCACTCAAAAAGAATCTCTTGAGACAAAAGCCCAAATCTTTACTGCAGAAGTACTTAAGAAGGCAACAAACAATTACCATGAAAGTGAAAAGCTTGGTGAAGGAGGCTATGGAACAGTCTACAAAGGTATACTCAAGGATGAAAGAGTGGTTGCAATAAAGAAGTCCAAAAATACTGCCCAGATCGAGAGTGACCAGTTTGTTAATGAGGTGGTTGTTCTCTCTCAAATCAATCATAAAAATGTGGTGAGGCTTATAGGTTGTTGTTTGGAGACACAAATGCCTTTGTTAGTCTATGAGTTTGTTGGCAACGGCACTCTTTATGAGCACATTCATAGAATAAATGGGAGAGAACCACTTTCGTGGGCGTTTCGATTGAAGATAGCCGCAGAAACTGCAAGTGCACTCTCATACTTACACCACTCGACATCGATCCCAATCATTCACCGAGATGTAAAAGCAACCAATATACTACTAGATGAGAAGTTCACCGCAAAAGTGTCGGACTTTGGAGCTTCCCGTTTGGTTCCCGAAGATCCAAATCAACTTCCAACTATAGTGCAAGGGACAATGGGGTACTTAGACCCTGAATATCTTCAATCAAACATACTCACAGACAAAAGTGACGTTTATAGCTTTGGAGTGTCCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK cEGF

Protein Analysis

456

Amino Acids

50.59

Weight (kDa)

7.43

Isoelectric Point (pI)

32.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EGF_CA PF07645 139 - 175 4.6e-06 Calcium-binding EGF domain
Pkinase PF00069 265 - 455 7.9e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 268 - 455 4.7e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 484
Acc36I ACCTGC 1 cut(s) 484
AccI GTMKAC 2 cut(s) 837, 847
AciI CCGC 8 cut(s) 24, 77, 94, 351, 636, 693, 1104, 1209
AclWI GGATC 2 cut(s) 1144, 1247
AcoI YGGCCR 1 cut(s) 121
AcsI RAATTY 3 cut(s) 340, 469, 573
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 5 cut(s) 243, 295, 677, 771, 1295
AfiI CCNNNNNNNGG 1 cut(s) 404
AflII CTTAAG 1 cut(s) 773
AgsI TTSAA 6 cut(s) 209, 571, 643, 710, 1096, 1316
AjnI CCWGG 2 cut(s) 225, 379
AjuI GAANNNNNNNTTGG 2 cut(s) 563, 595
AleI CACNNNNGTG 1 cut(s) 1078
AluBI AGCT 8 cut(s) 114, 141, 232, 281, 597, 811, 1232, 1353
AluI AGCT 8 cut(s) 114, 141, 232, 281, 597, 811, 1232, 1353
Alw21I GWGCWC 4 cut(s) 14, 431, 1047, 1123
Alw26I GTCTC 3 cut(s) 640, 734, 983
Alw44I GTGCAC 2 cut(s) 10, 1119
AlwI GGATC 2 cut(s) 1144, 1247
AlwNI CAGNNNCTG 1 cut(s) 1112
AoxI GGCC 3 cut(s) 121, 178, 694
ApaLI GTGCAC 2 cut(s) 10, 1119
ApoI RAATTY 3 cut(s) 340, 469, 573
Asp700I GAANNNNTTC 1 cut(s) 1311
AspS9I GGNCC 2 cut(s) 524, 695
AsuHPI GGTGA 6 cut(s) 337, 465, 827, 976, 1154, 1198
AsuII TTCGAA 1 cut(s) 657
AvaII GGWCC 1 cut(s) 524
BaeGI GKGCMC 2 cut(s) 14, 1123
Bbv12I GWGCWC 4 cut(s) 14, 431, 1047, 1123
BccI CCATC 2 cut(s) 170, 515
BceAI ACGGC 2 cut(s) 136, 1045
BcgI CGANNNNNNTGC 4 cut(s) 34, 68, 1200, 1234
BciT130I CCWGG 2 cut(s) 227, 381
BcoDI GTCTC 3 cut(s) 640, 734, 983
BfaI CTAG 1 cut(s) 1193
BfmI CTRYAG 2 cut(s) 762, 1272
BfrI CTTAAG 1 cut(s) 773
BfuAI ACCTGC 1 cut(s) 484
BisI GCNGC 3 cut(s) 352, 694, 1104
BlsI GCNGC 3 cut(s) 353, 695, 1105
BmcAI AGTACT 2 cut(s) 677, 771
Bme1390I CCNGG 2 cut(s) 227, 381
Bme18I GGWCC 1 cut(s) 524
BmgT120I GGNCC 2 cut(s) 524, 695
BmiI GGNNCC 1 cut(s) 1245
BmrFI CCNGG 2 cut(s) 227, 381
BmrI ACTGGG 1 cut(s) 259
BmsI GCATC 1 cut(s) 673
BmuI ACTGGG 1 cut(s) 259
Bpu14I TTCGAA 1 cut(s) 657
BpuEI CTTGAG 3 cut(s) 54, 758, 836
Bsa29I ATCGAT 1 cut(s) 1148
BsaBI GATNNNNATC 2 cut(s) 1154, 1257
BsaHI GRCGYC 1 cut(s) 51
BsaJI CCNNGG 3 cut(s) 19, 237, 527
BsaXI ACNNNNNCTCC 2 cut(s) 508, 538
Bsc4I CCNNNNNNNGG 1 cut(s) 404
Bse118I RCCGGY 1 cut(s) 347
Bse1I ACTGG 5 cut(s) 52, 254, 370, 619, 913
Bse3DI GCAATG 1 cut(s) 361
Bse8I GATNNNNATC 2 cut(s) 1154, 1257
BseBI CCWGG 2 cut(s) 227, 381
BseCI ATCGAT 1 cut(s) 1148
BseDI CCNNGG 3 cut(s) 19, 237, 527
BseGI GGATG 2 cut(s) 222, 862
BseJI GATNNNNATC 2 cut(s) 1154, 1257
BseLI CCNNNNNNNGG 1 cut(s) 404
BseMI GCAATG 1 cut(s) 361
BseNI ACTGG 5 cut(s) 52, 254, 370, 619, 913
BseSI GKGCMC 2 cut(s) 14, 1123
BshFI GGCC 3 cut(s) 123, 180, 696
BshVI ATCGAT 1 cut(s) 1148
BsiHKAI GWGCWC 4 cut(s) 14, 431, 1047, 1123
BsiSI CCGG 1 cut(s) 348
BslFI GGGAC 2 cut(s) 59, 1297
BslI CCNNNNNNNGG 1 cut(s) 404
BsmAI GTCTC 3 cut(s) 640, 734, 983
BsmBI CGTCTC 1 cut(s) 640
BsmFI GGGAC 2 cut(s) 59, 1297
BsnI GGCC 3 cut(s) 123, 180, 696
Bsp119I TTCGAA 1 cut(s) 657
Bsp1286I GDGCHC 4 cut(s) 14, 431, 1047, 1123
Bsp143I GATC 3 cut(s) 900, 1149, 1252
Bsp19I CCATGG 2 cut(s) 237, 527
BspACI CCGC 8 cut(s) 24, 77, 94, 351, 636, 693, 1104, 1209
BspANI GGCC 3 cut(s) 123, 180, 696
BspDI ATCGAT 1 cut(s) 1148
BspLI GGNNCC 1 cut(s) 1245
BspMAI CTGCAG 1 cut(s) 766
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 2 cut(s) 1144, 1247
BspT104I TTCGAA 1 cut(s) 657
BspTI CTTAAG 1 cut(s) 773
BsrDI GCAATG 1 cut(s) 361
BsrFI RCCGGY 1 cut(s) 347
BsrI ACTGG 5 cut(s) 52, 254, 370, 619, 913
BssAI RCCGGY 1 cut(s) 347
BssECI CCNNGG 3 cut(s) 19, 237, 527
BssMI GATC 3 cut(s) 900, 1149, 1252
BssNAI GTATAC 1 cut(s) 848
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 3 cut(s) 19, 237, 527
Bst1107I GTATAC 1 cut(s) 848
Bst2UI CCWGG 2 cut(s) 227, 381
Bst4CI ACNGT 2 cut(s) 100, 835
Bst6I CTCTTC 1 cut(s) 188
BstACI GRCGYC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 773
BstAPI GCANNNNNTGC 1 cut(s) 1112
BstBI TTCGAA 1 cut(s) 657
BstC8I GCNNGC 3 cut(s) 307, 377, 481
BstDEI CTNAG 1 cut(s) 1297
BstDSI CCRYGG 2 cut(s) 237, 527
BstF5I GGATG 2 cut(s) 222, 862
BstKTI GATC 3 cut(s) 903, 1152, 1255
BstMAI GTCTC 3 cut(s) 640, 734, 983
BstMBI GATC 3 cut(s) 900, 1149, 1252
BstMWI GCNNNNNNNGC 4 cut(s) 120, 311, 381, 1112
BstNI CCWGG 2 cut(s) 227, 381
BstNSI RCATGY 2 cut(s) 309, 465
BstSCI CCNGG 2 cut(s) 225, 379
BstSFI CTRYAG 2 cut(s) 762, 1272
BstSLI GKGCMC 2 cut(s) 14, 1123
BstX2I RGATCY 1 cut(s) 1252
BstXI CCANNNNNNTGG 1 cut(s) 1080
BstYI RGATCY 1 cut(s) 1252
BstZ17I GTATAC 1 cut(s) 848
Bsu15I ATCGAT 1 cut(s) 1148
BsuRI GGCC 3 cut(s) 123, 180, 696
BsuTUI ATCGAT 1 cut(s) 1148
BtgI CCRYGG 2 cut(s) 237, 527
BtsCI GGATG 2 cut(s) 222, 862
BtsIMutI CAGTG 2 cut(s) 45, 377
BveI ACCTGC 1 cut(s) 484
Cac8I GCNNGC 3 cut(s) 307, 377, 481
CaiI CAGNNNCTG 1 cut(s) 1112
Cfr10I RCCGGY 1 cut(s) 347
Cfr13I GGNCC 2 cut(s) 524, 695
ClaI ATCGAT 1 cut(s) 1148
CseI GACGC 1 cut(s) 40
Csp6I GTAC 5 cut(s) 242, 294, 676, 770, 1294
CviAII CATG 7 cut(s) 80, 238, 270, 306, 462, 528, 797
CviQI GTAC 5 cut(s) 242, 294, 676, 770, 1294
DdeI CTNAG 1 cut(s) 1297
DpnI GATC 3 cut(s) 902, 1151, 1254
DpnII GATC 3 cut(s) 900, 1149, 1252
EaeI YGGCCR 1 cut(s) 121
Eam1104I CTCTTC 1 cut(s) 188
EarI CTCTTC 1 cut(s) 188
Eco130I CCWWGG 3 cut(s) 19, 237, 527
Eco47I GGWCC 1 cut(s) 524
EcoRII CCWGG 2 cut(s) 225, 379
EcoT14I CCWWGG 3 cut(s) 19, 237, 527
EcoT22I ATGCAT 1 cut(s) 307
ErhI CCWWGG 3 cut(s) 19, 237, 527
Esp3I CGTCTC 1 cut(s) 640
FaeI CATG 7 cut(s) 83, 241, 273, 309, 465, 531, 800
FalI AAGNNNNNCTT 2 cut(s) 720, 752
FaqI GGGAC 2 cut(s) 59, 1297
FatI CATG 7 cut(s) 79, 237, 269, 305, 461, 527, 796
FauI CCCGC 1 cut(s) 84
FblI GTMKAC 2 cut(s) 837, 847
Fnu4HI GCNGC 3 cut(s) 352, 694, 1104
FokI GGATG 2 cut(s) 209, 869
Fsp4HI GCNGC 3 cut(s) 352, 694, 1104
FspBI CTAG 1 cut(s) 1193
GluI GCNGC 3 cut(s) 352, 694, 1104
HaeIII GGCC 3 cut(s) 123, 180, 696
HapII CCGG 1 cut(s) 348
HgaI GACGC 1 cut(s) 40
Hin1I GRCGYC 1 cut(s) 51
Hin1II CATG 7 cut(s) 83, 241, 273, 309, 465, 531, 800
HincII GTYRAC 1 cut(s) 556
HindII GTYRAC 1 cut(s) 556
HindIII AAGCTT 2 cut(s) 595, 809
HinfI GANTC 4 cut(s) 38, 618, 639, 731
HpaI GTTAAC 1 cut(s) 556
HpaII CCGG 1 cut(s) 348
HphI GGTGA 6 cut(s) 337, 465, 827, 976, 1154, 1198
Hpy166II GTNNAC 7 cut(s) 12, 556, 720, 838, 848, 1121, 1206
Hpy188I TCNGA 2 cut(s) 336, 1222
Hpy188III TCNNGA 5 cut(s) 514, 643, 737, 904, 1247
Hpy8I GTNNAC 7 cut(s) 12, 556, 720, 838, 848, 1121, 1206
Hpy99I CGWCG 1 cut(s) 56
HpyAV CCTTC 3 cut(s) 383, 772, 812
HpyCH4III ACNGT 2 cut(s) 100, 835
HpyCH4IV ACGT 2 cut(s) 264, 1344
HpyF10VI GCNNNNNNNGC 4 cut(s) 120, 311, 381, 1112
HpyF3I CTNAG 1 cut(s) 1297
HpySE526I ACGT 2 cut(s) 264, 1344
Hsp92I GRCGYC 1 cut(s) 51
Hsp92II CATG 7 cut(s) 83, 241, 273, 309, 465, 531, 800
KspAI GTTAAC 1 cut(s) 556
Kzo9I GATC 3 cut(s) 900, 1149, 1252
LmnI GCTCC 3 cut(s) 138, 229, 1229
LweI GCATC 1 cut(s) 673
MaeI CTAG 1 cut(s) 1193
MaeII ACGT 2 cut(s) 264, 1344
MaeIII GTNAC 5 cut(s) 100, 155, 359, 908, 1340
MalI GATC 3 cut(s) 902, 1151, 1254
MboI GATC 3 cut(s) 900, 1149, 1252
MboII GAAGA 4 cut(s) 175, 1108, 1262, 1304
MflI RGATCY 1 cut(s) 1252
MhlI GDGCHC 4 cut(s) 14, 431, 1047, 1123
MluCI AATT 7 cut(s) 340, 469, 484, 573, 653, 713, 790
MlyI GAGTC 1 cut(s) 47
MmeI TCCRAC 2 cut(s) 1200, 1292
MnlI CCTC 6 cut(s) 191, 268, 553, 815, 919, 960
Mph1103I ATGCAT 1 cut(s) 307
MroXI GAANNNNTTC 1 cut(s) 1311
MseI TTAA 7 cut(s) 144, 192, 246, 555, 666, 774, 921
MslI CAYNNNNRTG 5 cut(s) 532, 801, 957, 1078, 1167
MspCI CTTAAG 1 cut(s) 773
MspI CCGG 1 cut(s) 348
MspR9I CCNGG 2 cut(s) 227, 381
MvaI CCWGG 2 cut(s) 227, 381
MwoI GCNNNNNNNGC 4 cut(s) 120, 311, 381, 1112
NcoI CCATGG 2 cut(s) 237, 527
NdeII GATC 3 cut(s) 900, 1149, 1252
NlaIII CATG 7 cut(s) 83, 241, 273, 309, 465, 531, 800
NlaIV GGNNCC 1 cut(s) 1245
NmeAIII GCCGAG 1 cut(s) 410
NmuCI GTSAC 3 cut(s) 100, 908, 1340
NsiI ATGCAT 1 cut(s) 307
NspI RCATGY 2 cut(s) 309, 465
NspV TTCGAA 1 cut(s) 657
OliI CACNNNNGTG 1 cut(s) 1078
PaeI GCATGC 1 cut(s) 309
PaqCI CACCTGC 1 cut(s) 484
PcsI WCGNNNNNNNCGW 1 cut(s) 270
PdmI GAANNNNTTC 1 cut(s) 1311
PfeI GAWTC 3 cut(s) 618, 639, 731
PfoI TCCNGGA 1 cut(s) 225
PkrI GCNGC 3 cut(s) 353, 695, 1105
PleI GAGTC 1 cut(s) 46
PpsI GAGTC 1 cut(s) 46
Psp6I CCWGG 2 cut(s) 225, 379
PspGI CCWGG 2 cut(s) 225, 379
PspN4I GGNNCC 1 cut(s) 1245
PspPI GGNCC 2 cut(s) 524, 695
PstI CTGCAG 1 cut(s) 766
PstNI CAGNNNCTG 1 cut(s) 1112
PsuI RGATCY 1 cut(s) 1252
RsaI GTAC 5 cut(s) 243, 295, 677, 771, 1295
RsaNI GTAC 5 cut(s) 242, 294, 676, 770, 1294
RseI CAYNNNNRTG 5 cut(s) 532, 801, 957, 1078, 1167
SaqAI TTAA 7 cut(s) 144, 192, 246, 555, 666, 774, 921
SatI GCNGC 3 cut(s) 352, 694, 1104
Sau3AI GATC 3 cut(s) 900, 1149, 1252
Sau96I GGNCC 2 cut(s) 524, 695
ScaI AGTACT 2 cut(s) 677, 771
SchI GAGTC 1 cut(s) 47
ScrFI CCNGG 2 cut(s) 227, 381
SduI GDGCHC 4 cut(s) 14, 431, 1047, 1123
SfaNI GCATC 1 cut(s) 673
SfcI CTRYAG 2 cut(s) 762, 1272
SfuI TTCGAA 1 cut(s) 657
SgrAI CRCCGGYG 1 cut(s) 347
SinI GGWCC 1 cut(s) 524
SmiMI CAYNNNNRTG 5 cut(s) 532, 801, 957, 1078, 1167
SmlI CTYRAG 4 cut(s) 69, 737, 773, 851
SmoI CTYRAG 4 cut(s) 69, 737, 773, 851
SphI GCATGC 1 cut(s) 309
Sse9I AATT 7 cut(s) 340, 469, 484, 573, 653, 713, 790
SsiI CCGC 8 cut(s) 24, 77, 94, 351, 636, 693, 1104, 1209
SspMI CTAG 1 cut(s) 1193
StyD4I CCNGG 2 cut(s) 225, 379
StyI CCWWGG 3 cut(s) 19, 237, 527
TaaI ACNGT 2 cut(s) 100, 835
TaiI ACGT 2 cut(s) 267, 1347
TaqI TCGA 7 cut(s) 30, 657, 681, 903, 1090, 1142, 1148
TasI AATT 7 cut(s) 340, 469, 484, 573, 653, 713, 790
TatI WGTACW 2 cut(s) 675, 769
TauI GCSGC 3 cut(s) 354, 696, 1106
TfiI GAWTC 3 cut(s) 618, 639, 731
Tru1I TTAA 7 cut(s) 144, 192, 246, 555, 666, 774, 921
Tru9I TTAA 7 cut(s) 144, 192, 246, 555, 666, 774, 921
TscAI CASTG 2 cut(s) 52, 377
TseFI GTSAC 3 cut(s) 100, 908, 1340
Tsp45I GTSAC 3 cut(s) 100, 908, 1340
TspDTI ATGAA 3 cut(s) 813, 873, 1040
TspGWI ACGGA 1 cut(s) 311
TspRI CASTG 2 cut(s) 52, 377
Vha464I CTTAAG 1 cut(s) 773
VneI GTGCAC 2 cut(s) 10, 1119
VpaK11BI GGWCC 1 cut(s) 524
XapI RAATTY 3 cut(s) 340, 469, 573
XceI RCATGY 2 cut(s) 309, 465
XcmI CCANNNNNNNNNTGG 1 cut(s) 377
XmiI GTMKAC 2 cut(s) 837, 847
XmnI GAANNNNTTC 1 cut(s) 1311
XspI CTAG 1 cut(s) 1193
ZrmI AGTACT 2 cut(s) 677, 771
Zsp2I ATGCAT 1 cut(s) 307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.