Rmu_sc0000083.1_g000009

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000083.1
Physical Location & Seq
Forward (+)
65316 .. 65669
354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000083.1_g000009.1.cds

Sequence Viewer

Length: 354 bp
atggatgaagattgcttaaaacaagttcatgatgatgccatagtgaatgagggaaacattgagacagtagaaaacgtggcgagtctcgcaaaaagatgtttgagggtaaaaggggaggaaaggcctaccatgaaagaagttgccatggagttagagggaatgacaattatggcaaagcatccatggggaaagaatgccatgttttgtccagaggagaatgagtacttgcttcggtcaccttcagacagttatgttatggatgttagaggaggtgatcgcaattctagtggtttaactactgggtataacagcatgcaaatccagatgttgatgccacgtggtgatggacgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

117

Amino Acids

13.16

Weight (kDa)

4.9

Isoelectric Point (pI)

48.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 225
AcvI CACGTG 1 cut(s) 338
AdeI CACNNNGTG 1 cut(s) 341
AfaI GTAC 1 cut(s) 224
Alw26I GTCTC 2 cut(s) 56, 89
AoxI GGCC 1 cut(s) 122
AsuHPI GGTGA 3 cut(s) 228, 284, 353
BbrPI CACGTG 1 cut(s) 338
BccI CCATC 1 cut(s) 338
BcoDI GTCTC 2 cut(s) 56, 89
BfaI CTAG 1 cut(s) 285
BmcAI AGTACT 1 cut(s) 224
BmrI ACTGGG 1 cut(s) 309
BmsI GCATC 3 cut(s) 25, 187, 321
BmuI ACTGGG 1 cut(s) 309
BsaAI YACGTR 1 cut(s) 338
BsaJI CCNNGG 2 cut(s) 144, 182
BsaXI ACNNNNNCTCC 2 cut(s) 206, 236
Bse1I ACTGG 1 cut(s) 304
BseDI CCNNGG 2 cut(s) 144, 182
BseGI GGATG 3 cut(s) 10, 178, 265
BseNI ACTGG 1 cut(s) 304
BseRI GAGGAG 2 cut(s) 227, 282
BshFI GGCC 1 cut(s) 124
BsmAI GTCTC 2 cut(s) 56, 89
BsmI GAATGC 1 cut(s) 199
BsnI GGCC 1 cut(s) 124
Bsp143I GATC 1 cut(s) 274
Bsp19I CCATGG 2 cut(s) 144, 182
BspANI GGCC 1 cut(s) 124
BspHI TCATGA 1 cut(s) 28
BsrI ACTGG 1 cut(s) 304
BssECI CCNNGG 2 cut(s) 144, 182
BssMI GATC 1 cut(s) 274
BssT1I CCWWGG 2 cut(s) 144, 182
Bst4CI ACNGT 2 cut(s) 67, 248
BstBAI YACGTR 1 cut(s) 338
BstC8I GCNNGC 1 cut(s) 314
BstDSI CCRYGG 2 cut(s) 144, 182
BstEII GGTNACC 1 cut(s) 234
BstF5I GGATG 3 cut(s) 10, 178, 265
BstKTI GATC 1 cut(s) 277
BstMAI GTCTC 2 cut(s) 56, 89
BstMBI GATC 1 cut(s) 274
BstMWI GCNNNNNNNGC 1 cut(s) 86
BstNSI RCATGY 1 cut(s) 316
BstPI GGTNACC 1 cut(s) 234
BsuRI GGCC 1 cut(s) 124
BtgI CCRYGG 2 cut(s) 144, 182
BtsCI GGATG 3 cut(s) 10, 178, 265
Cac8I GCNNGC 1 cut(s) 314
CciI TCATGA 1 cut(s) 28
Csp6I GTAC 1 cut(s) 223
CspCI CAANNNNNGTGG 2 cut(s) 268, 303
CviAII CATG 6 cut(s) 29, 130, 145, 183, 199, 313
CviJI RGCY 1 cut(s) 124
CviKI_1 RGCY 1 cut(s) 124
CviQI GTAC 1 cut(s) 223
DpnI GATC 1 cut(s) 276
DpnII GATC 1 cut(s) 274
DraIII CACNNNGTG 1 cut(s) 341
Eco130I CCWWGG 2 cut(s) 144, 182
Eco147I AGGCCT 1 cut(s) 124
Eco57I CTGAAG 1 cut(s) 225
Eco72I CACGTG 1 cut(s) 338
Eco91I GGTNACC 1 cut(s) 234
EcoO65I GGTNACC 1 cut(s) 234
EcoT14I CCWWGG 2 cut(s) 144, 182
ErhI CCWWGG 2 cut(s) 144, 182
FaeI CATG 6 cut(s) 32, 133, 148, 186, 202, 316
FatI CATG 6 cut(s) 28, 129, 144, 182, 198, 312
FokI GGATG 3 cut(s) 17, 165, 272
FspBI CTAG 1 cut(s) 285
HaeIII GGCC 1 cut(s) 124
Hin1II CATG 6 cut(s) 32, 133, 148, 186, 202, 316
HinfI GANTC 1 cut(s) 82
HphI GGTGA 3 cut(s) 228, 284, 353
Hpy188I TCNGA 1 cut(s) 244
Hpy188III TCNNGA 3 cut(s) 29, 209, 322
HpyAV CCTTC 1 cut(s) 249
HpyCH4III ACNGT 2 cut(s) 67, 248
HpyCH4IV ACGT 2 cut(s) 75, 337
HpyCH4V TGCA 1 cut(s) 316
HpyF10VI GCNNNNNNNGC 1 cut(s) 86
HpySE526I ACGT 2 cut(s) 75, 337
Hsp92II CATG 6 cut(s) 32, 133, 148, 186, 202, 316
Kzo9I GATC 1 cut(s) 274
LpnPI CCDG 3 cut(s) 222, 285, 335
LweI GCATC 3 cut(s) 25, 187, 321
MaeI CTAG 1 cut(s) 285
MaeII ACGT 2 cut(s) 75, 337
MaeIII GTNAC 1 cut(s) 234
MalI GATC 1 cut(s) 276
MboI GATC 1 cut(s) 274
MboII GAAGA 1 cut(s) 20
MluCI AATT 2 cut(s) 165, 280
MlyI GAGTC 1 cut(s) 91
MnlI CCTC 7 cut(s) 43, 96, 109, 148, 205, 260, 263
MseI TTAA 2 cut(s) 17, 293
MslI CAYNNNNRTG 1 cut(s) 33
Mva1269I GAATGC 1 cut(s) 199
MwoI GCNNNNNNNGC 1 cut(s) 86
NcoI CCATGG 2 cut(s) 144, 182
NdeII GATC 1 cut(s) 274
NlaIII CATG 6 cut(s) 32, 133, 148, 186, 202, 316
NmuCI GTSAC 1 cut(s) 234
NspI RCATGY 1 cut(s) 316
PaeI GCATGC 1 cut(s) 316
PagI TCATGA 1 cut(s) 28
PceI AGGCCT 1 cut(s) 124
PctI GAATGC 1 cut(s) 199
PleI GAGTC 1 cut(s) 90
PmaCI CACGTG 1 cut(s) 338
PmlI CACGTG 1 cut(s) 338
PpsI GAGTC 1 cut(s) 90
Ppu21I YACGTR 1 cut(s) 338
PspCI CACGTG 1 cut(s) 338
PspEI GGTNACC 1 cut(s) 234
RsaI GTAC 1 cut(s) 224
RsaNI GTAC 1 cut(s) 223
RseI CAYNNNNRTG 1 cut(s) 33
SaqAI TTAA 2 cut(s) 17, 293
Sau3AI GATC 1 cut(s) 274
ScaI AGTACT 1 cut(s) 224
SchI GAGTC 1 cut(s) 91
SetI ASST 4 cut(s) 78, 241, 274, 340
SfaNI GCATC 3 cut(s) 25, 187, 321
SmiMI CAYNNNNRTG 1 cut(s) 33
SphI GCATGC 1 cut(s) 316
Sse9I AATT 2 cut(s) 165, 280
SseBI AGGCCT 1 cut(s) 124
SspMI CTAG 1 cut(s) 285
StuI AGGCCT 1 cut(s) 124
StyI CCWWGG 2 cut(s) 144, 182
TaaI ACNGT 2 cut(s) 67, 248
TaiI ACGT 2 cut(s) 78, 340
TaqII GACCGA 1 cut(s) 222
TasI AATT 2 cut(s) 165, 280
TatI WGTACW 1 cut(s) 222
Tru1I TTAA 2 cut(s) 17, 293
Tru9I TTAA 2 cut(s) 17, 293
TseFI GTSAC 1 cut(s) 234
Tsp45I GTSAC 1 cut(s) 234
TspDTI ATGAA 3 cut(s) 17, 21, 146
XceI RCATGY 1 cut(s) 316
XspI CTAG 1 cut(s) 285
ZrmI AGTACT 1 cut(s) 224
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.