RchiOBHm_Chr5g0016871

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000066
Physical Location & Seq
Reverse (-)
11569938 .. 11572565
2628 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29722

Sequence Viewer

Length: 1848 bp
ATGGCCGCCTTGCAGGGGATCTTGCTCATCATCCAACTCTCATTCGTAATCATCAGAGTATTGATTGTATCAACAACAGCAGCAGCACCTCAAGCGCTGCCTAACTGCCCTGACAAATGTGGTAATCTCACAGTTCCTTATCCATTTGGCATGGCCGAAGGTTGTTACCAAGGAAATGACTTCTTTGTCAATTGTAGCCAGGCAACCGATCCCCCAATAGCATATTTGACCAAAAATGGCACTGTCATCATTACCAACATATCCCTTGCTGAGGGTGAGTTGCAAATATCAGACTTTATAGCTCGATATTGCTATAGCACCTCTGCTCTGAGAACCAGAAGGAACAGCCCTGTGCTACGGCTGCCTTCTCCTTACATCATCTCTGATACCAAAAACAAATTCATTGCCGTTGGTTGTGACACTTATGCAATTTTCAAAGGATTCCAGGGCACAGAACAGTCCATAACTGGGTGTATGTCAGTATGTAACAGCCTAAAAAGCGTTGATCAGAATTCTTGCTCTGGGGTTGGGTGTGGCCAAACAAACATTCCTAGCGGACTGCATAACCGTACTATGACACTGGATAGCTATAGCAATCATTCAGGTATATGGGACTTTAACCCCTGCAGCTTTGCATTCATTGTTGAAGAGACACAGTTCAAGTTCTCTGGGAACACAAGTTTTCAACAACTGAACAGCACTACACGGCTTCCAATGGTTCTTAATTGGGCAATTGGGGACGAGCCAGACCCATGTGATGTAGCTAAAAAGAGGCAGGATTTCGTATGCCAGAACTATAGCAAGTGTGTGAATCCCACAAATAGGAATGGTTACATTTGCCAGTGCTTGGATGGTTACGAAGGGAACCCATACCACCCAAATGGTTGTCACGATATTGATGAGTGCAAGGATCCAAACCTCTGCAACCACGAAGAGTGCAAAAATTTGGCAGGAAGTTACTACTGTTCATGCTCAAAAGGATACAAGATCGACAGCATGAATGACAAGAGTTGCATCAAAGAGAATCCCAAAAATAAATCAAAGATGACTCTCCTGCTTATTATTTCATTGAGTGTAAGTATAGGCTTATTGGTTTTATTTGTGGGGATTTCGTGGATATGTTGCGGGATAAAGAGAAGAAAATACACTAAACTCAAAGAAAAGTACTTCAAAGAGAATGGTGGCTTATTGTTACTACAACAACTTGCTAGTCATGGAGGCACTGTGGAGACAACAAAAATCTTTTCCACAGAAGAACTTGAGAAGGCAACAAACAATTACCACGAGCGTAGAATCCTTGGAGAAGGAGGCTATGGAACCGTGTACAAAGGAATACTACCAGATGACAAAGTGGTGGCCATAAAGAAGTCAAAAGGTGGTGCCCCAACCCAAAGTGATCAGTTTGTTAACGAGGTAATTGTTCTTTCTCAAATAAACCACAGAAATGTGGTGAAGCTACTAGGTTGTTGTTTAGAGACAGAAGTGCCTTTACTAGTATATGAGTTCATCACCCATGGAACTCTTTATGAGCATATTCATAAAAAAAGATCATCACTGTCATTTGAATTACGAATGAAGATAGCAGTTGAAACGGCAGAAGCACTGGCATACTTACACTCCTCAACTTCAAATCCAATCATACATCGAGATGTGAAAGCAGAAAATATACTCTTAGATGATGCTTATACAGCAAAAATATCAGACTTTGGAGCTTCAAGATTGATTCCATCAGGTCAAACTGAAATACAAACTTTAGTGCTAGGGACATTCGGCTACCTAGACCCGGAATATCTGCAATCGAACCAACTAACAGAAAAGTGTGACGTCTACAGCTTTGGTGTGTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

615

Amino Acids

68.02

Weight (kDa)

6.67

Isoelectric Point (pI)

35.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 36 - 98 1.1e-10 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 298 - 338 1e-07 Calcium-binding EGF domain
Pkinase PF00069 427 - 614 3.2e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 430 - 614 5.7e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 185
AatII GACGTC 1 cut(s) 1827
AccB1I GGYRCC 1 cut(s) 1379
AccB7I CCANNNNNTGG 1 cut(s) 847
AccI GTMKAC 1 cut(s) 1827
AciI CCGC 3 cut(s) 6, 555, 1125
AclWI GGATC 4 cut(s) 26, 203, 905, 918
AcoI YGGCCR 4 cut(s) 3, 153, 535, 1356
AcsI RAATTY 3 cut(s) 398, 511, 943
AcyI GRCGYC 1 cut(s) 1824
AfaI GTAC 3 cut(s) 571, 1166, 1325
AfeI AGCGCT 1 cut(s) 96
AfiI CCNNNNNNNGG 6 cut(s) 15, 271, 468, 822, 847, 1783
AgsI TTSAA 9 cut(s) 436, 647, 661, 686, 1171, 1565, 1589, 1629, 1716
AhlI ACTAGT 1 cut(s) 1492
AjnI CCWGG 2 cut(s) 198, 444
AjuI GAANNNNNNNTTGG 4 cut(s) 383, 415, 531, 563
AluBI AGCT 7 cut(s) 302, 588, 630, 764, 1456, 1712, 1833
AluI AGCT 7 cut(s) 302, 588, 630, 764, 1456, 1712, 1833
Alw26I GTCTC 3 cut(s) 644, 1223, 1469
AlwI GGATC 4 cut(s) 26, 203, 905, 918
Aor51HI AGCGCT 1 cut(s) 96
AoxI GGCC 4 cut(s) 3, 153, 535, 1356
ApeKI GCWGC 5 cut(s) 80, 83, 97, 361, 627
ApoI RAATTY 3 cut(s) 398, 511, 943
AspLEI GCGC 1 cut(s) 97
AsuC2I CCSGG 1 cut(s) 1784
AsuHPI GGTGA 3 cut(s) 287, 1462, 1501
BaeGI GKGCMC 2 cut(s) 452, 1384
BalI TGGCCA 2 cut(s) 537, 1358
BamHI GGATCC 1 cut(s) 910
BanI GGYRCC 1 cut(s) 1379
BarI GAAGNNNNNNTAC 2 cut(s) 1473, 1505
BauI CACGAG 1 cut(s) 1283
BbvCI CCTCAGC 1 cut(s) 270
BbvI GCAGC 5 cut(s) 84, 92, 95, 348, 639
BccI CCATC 2 cut(s) 845, 1735
BceAI ACGGC 4 cut(s) 374, 392, 722, 1608
BciT130I CCWGG 2 cut(s) 200, 446
BciVI GTATCC 1 cut(s) 974
BclI TGATCA 2 cut(s) 505, 1396
BcnI CCSGG 1 cut(s) 1784
BcoDI GTCTC 3 cut(s) 644, 1223, 1469
BcuI ACTAGT 1 cut(s) 1492
BfaI CTAG 7 cut(s) 552, 1209, 1460, 1493, 1760, 1778, 1846
BfmI CTRYAG 5 cut(s) 313, 589, 625, 796, 1828
BfoI RGCGCY 1 cut(s) 98
BfuI GTATCC 1 cut(s) 974
BisI GCNGC 6 cut(s) 6, 81, 84, 98, 362, 628
BlsI GCNGC 6 cut(s) 7, 82, 85, 99, 363, 629
BmcAI AGTACT 1 cut(s) 1166
Bme1390I CCNGG 3 cut(s) 200, 446, 1784
BmiI GGNNCC 4 cut(s) 866, 912, 1318, 1381
BmrFI CCNGG 3 cut(s) 200, 446, 1784
BmrI ACTGGG 1 cut(s) 477
BmsI GCATC 2 cut(s) 1023, 1669
BmuI ACTGGG 1 cut(s) 477
Bpu10I CCTNAGC 1 cut(s) 270
BpuEI CTTGAG 2 cut(s) 75, 1280
BpuMI CCSGG 1 cut(s) 1784
BsaHI GRCGYC 1 cut(s) 1824
BsaJI CCNNGG 4 cut(s) 169, 445, 1297, 1513
BsaXI ACNNNNNCTCC 4 cut(s) 1209, 1239, 1601, 1631
Bsc4I CCNNNNNNNGG 6 cut(s) 15, 271, 468, 822, 847, 1783
Bse1I ACTGG 4 cut(s) 472, 585, 841, 1608
Bse3DI GCAATG 1 cut(s) 402
BseBI CCWGG 2 cut(s) 200, 446
BseDI CCNNGG 4 cut(s) 169, 445, 1297, 1513
BseGI GGATG 2 cut(s) 30, 856
BseLI CCNNNNNNNGG 6 cut(s) 15, 271, 468, 822, 847, 1783
BseMI GCAATG 1 cut(s) 402
BseMII CTCAG 2 cut(s) 261, 320
BseNI ACTGG 4 cut(s) 472, 585, 841, 1608
BseRI GAGGAG 1 cut(s) 1609
BseSI GKGCMC 2 cut(s) 452, 1384
BseXI GCAGC 5 cut(s) 84, 92, 95, 348, 639
BshFI GGCC 4 cut(s) 5, 155, 537, 1358
BshNI GGYRCC 1 cut(s) 1379
BsiSI CCGG 1 cut(s) 1784
BslFI GGGAC 3 cut(s) 626, 752, 1777
BslI CCNNNNNNNGG 6 cut(s) 15, 271, 468, 822, 847, 1783
BsmAI GTCTC 3 cut(s) 644, 1223, 1469
BsmFI GGGAC 3 cut(s) 626, 752, 1777
BsmI GAATGC 1 cut(s) 635
BsnI GGCC 4 cut(s) 5, 155, 537, 1358
Bsp1286I GDGCHC 2 cut(s) 452, 1384
Bsp1407I TGTACA 1 cut(s) 1323
Bsp143I GATC 7 cut(s) 18, 208, 505, 910, 987, 1396, 1547
Bsp19I CCATGG 1 cut(s) 1513
BspACI CCGC 3 cut(s) 6, 555, 1125
BspANI GGCC 4 cut(s) 5, 155, 537, 1358
BspCNI CTCAG 2 cut(s) 262, 321
BspLI GGNNCC 4 cut(s) 866, 912, 1318, 1381
BspMAI CTGCAG 1 cut(s) 629
BspPI GGATC 4 cut(s) 26, 203, 905, 918
BspT107I GGYRCC 1 cut(s) 1379
BsrDI GCAATG 1 cut(s) 402
BsrGI TGTACA 1 cut(s) 1323
BsrI ACTGG 4 cut(s) 472, 585, 841, 1608
BssECI CCNNGG 4 cut(s) 169, 445, 1297, 1513
BssMI GATC 7 cut(s) 18, 208, 505, 910, 987, 1396, 1547
BssNI GRCGYC 1 cut(s) 1824
BssSI CACGAG 1 cut(s) 1283
BssT1I CCWWGG 3 cut(s) 169, 1297, 1513
Bst2BI CACGAG 1 cut(s) 1283
Bst2UI CCWGG 2 cut(s) 200, 446
Bst4CI ACNGT 9 cut(s) 133, 244, 459, 569, 657, 965, 1225, 1321, 1557
Bst6I CTCTTC 2 cut(s) 642, 927
BstACI GRCGYC 1 cut(s) 1824
BstAUI TGTACA 1 cut(s) 1323
BstDEI CTNAG 3 cut(s) 270, 329, 1672
BstDSI CCRYGG 1 cut(s) 1513
BstENI CCTNNNNNAGG 1 cut(s) 269
BstF5I GGATG 2 cut(s) 30, 856
BstH2I RGCGCY 1 cut(s) 98
BstHHI GCGC 1 cut(s) 97
BstKTI GATC 7 cut(s) 21, 211, 508, 913, 990, 1399, 1550
BstMAI GTCTC 3 cut(s) 644, 1223, 1469
BstMBI GATC 7 cut(s) 18, 208, 505, 910, 987, 1396, 1547
BstMWI GCNNNNNNNGC 4 cut(s) 92, 361, 498, 1688
BstNI CCWGG 2 cut(s) 200, 446
BstSCI CCNGG 3 cut(s) 198, 444, 1782
BstSFI CTRYAG 5 cut(s) 313, 589, 625, 796, 1828
BstSLI GKGCMC 2 cut(s) 452, 1384
BstV1I GCAGC 5 cut(s) 84, 92, 95, 348, 639
BstX2I RGATCY 2 cut(s) 18, 910
BstXI CCANNNNNNTGG 1 cut(s) 881
BstYI RGATCY 2 cut(s) 18, 910
BsuI GTATCC 1 cut(s) 974
BsuRI GGCC 4 cut(s) 5, 155, 537, 1358
BtgI CCRYGG 1 cut(s) 1513
BtsCI GGATG 2 cut(s) 30, 856
BtsIMutI CAGTG 6 cut(s) 240, 578, 848, 1221, 1553, 1601
CfoI GCGC 1 cut(s) 97
Csp6I GTAC 3 cut(s) 570, 1165, 1324
CviAII CATG 6 cut(s) 151, 753, 969, 997, 1214, 1514
CviQI GTAC 3 cut(s) 570, 1165, 1324
DdeI CTNAG 3 cut(s) 270, 329, 1672
DpnI GATC 7 cut(s) 20, 210, 507, 912, 989, 1398, 1549
DpnII GATC 7 cut(s) 18, 208, 505, 910, 987, 1396, 1547
DrdI GACNNNNNNGTC 1 cut(s) 185
DseDI GACNNNNNNGTC 1 cut(s) 185
EaeI YGGCCR 4 cut(s) 3, 153, 535, 1356
Eam1104I CTCTTC 2 cut(s) 642, 927
EarI CTCTTC 2 cut(s) 642, 927
Eco130I CCWWGG 3 cut(s) 169, 1297, 1513
Eco47III AGCGCT 1 cut(s) 96
EcoNI CCTNNNNNAGG 1 cut(s) 269
EcoRI GAATTC 1 cut(s) 511
EcoRII CCWGG 2 cut(s) 198, 444
EcoT14I CCWWGG 3 cut(s) 169, 1297, 1513
ErhI CCWWGG 3 cut(s) 169, 1297, 1513
FaeI CATG 6 cut(s) 154, 756, 972, 1000, 1217, 1517
FaqI GGGAC 3 cut(s) 626, 752, 1777
FatI CATG 6 cut(s) 150, 752, 968, 996, 1213, 1513
FauI CCCGC 1 cut(s) 1118
FbaI TGATCA 2 cut(s) 505, 1396
FblI GTMKAC 1 cut(s) 1827
Fnu4HI GCNGC 6 cut(s) 6, 81, 84, 98, 362, 628
FokI GGATG 2 cut(s) 17, 863
Fsp4HI GCNGC 6 cut(s) 6, 81, 84, 98, 362, 628
FspBI CTAG 7 cut(s) 552, 1209, 1460, 1493, 1760, 1778, 1846
GlaI GCGC 1 cut(s) 96
GluI GCNGC 6 cut(s) 6, 81, 84, 98, 362, 628
HaeII RGCGCY 1 cut(s) 98
HaeIII GGCC 4 cut(s) 5, 155, 537, 1358
HapII CCGG 1 cut(s) 1784
HhaI GCGC 1 cut(s) 97
Hin1I GRCGYC 1 cut(s) 1824
Hin1II CATG 6 cut(s) 154, 756, 972, 1000, 1217, 1517
Hin6I GCGC 1 cut(s) 95
HinP1I GCGC 1 cut(s) 95
HincII GTYRAC 1 cut(s) 1408
HindII GTYRAC 1 cut(s) 1408
HinfI GANTC 6 cut(s) 441, 811, 1024, 1048, 1293, 1723
HpaI GTTAAC 1 cut(s) 1408
HpaII CCGG 1 cut(s) 1784
HphI GGTGA 3 cut(s) 287, 1462, 1501
Hpy166II GTNNAC 3 cut(s) 1324, 1408, 1828
Hpy188I TCNGA 6 cut(s) 56, 292, 330, 385, 510, 1702
Hpy188III TCNNGA 3 cut(s) 890, 1646, 1716
Hpy8I GTNNAC 3 cut(s) 1324, 1408, 1828
HpyAV CCTTC 6 cut(s) 152, 333, 375, 854, 1258, 1298
HpyCH4III ACNGT 9 cut(s) 133, 244, 459, 569, 657, 965, 1225, 1321, 1557
HpyCH4IV ACGT 1 cut(s) 1824
HpyF10VI GCNNNNNNNGC 4 cut(s) 92, 361, 498, 1688
HpyF3I CTNAG 3 cut(s) 270, 329, 1672
HpySE526I ACGT 1 cut(s) 1824
Hsp92I GRCGYC 1 cut(s) 1824
Hsp92II CATG 6 cut(s) 154, 756, 972, 1000, 1217, 1517
HspAI GCGC 1 cut(s) 95
Ksp22I TGATCA 2 cut(s) 505, 1396
KspAI GTTAAC 1 cut(s) 1408
Kzo9I GATC 7 cut(s) 18, 208, 505, 910, 987, 1396, 1547
LmnI GCTCC 1 cut(s) 1709
Lsp1109I GCAGC 5 cut(s) 84, 92, 95, 348, 639
LweI GCATC 2 cut(s) 1023, 1669
MaeI CTAG 7 cut(s) 552, 1209, 1460, 1493, 1760, 1778, 1846
MaeII ACGT 1 cut(s) 1824
MaeIII GTNAC 9 cut(s) 164, 416, 485, 830, 854, 887, 956, 1191, 1820
MalI GATC 7 cut(s) 20, 210, 507, 912, 989, 1398, 1549
MboI GATC 7 cut(s) 18, 208, 505, 910, 987, 1396, 1547
MboII GAAGA 5 cut(s) 659, 944, 1149, 1265, 1588
MfeI CAATTG 2 cut(s) 190, 732
MflI RGATCY 2 cut(s) 18, 910
MhlI GDGCHC 2 cut(s) 452, 1384
MlsI TGGCCA 2 cut(s) 537, 1358
MluNI TGGCCA 2 cut(s) 537, 1358
MlyI GAGTC 1 cut(s) 1042
MmeI TCCRAC 1 cut(s) 58
MnlI CCTC 9 cut(s) 99, 265, 331, 765, 929, 1211, 1301, 1405, 1630
Mox20I TGGCCA 2 cut(s) 537, 1358
MscI TGGCCA 2 cut(s) 537, 1358
MseI TTAA 3 cut(s) 618, 723, 1407
MslI CAYNNNNRTG 3 cut(s) 879, 1443, 1647
Msp20I TGGCCA 2 cut(s) 537, 1358
MspI CCGG 1 cut(s) 1784
MspR9I CCNGG 3 cut(s) 200, 446, 1784
MunI CAATTG 2 cut(s) 190, 732
Mva1269I GAATGC 1 cut(s) 635
MvaI CCWGG 2 cut(s) 200, 446
MwoI GCNNNNNNNGC 4 cut(s) 92, 361, 498, 1688
NciI CCSGG 1 cut(s) 1784
NcoI CCATGG 1 cut(s) 1513
NdeII GATC 7 cut(s) 18, 208, 505, 910, 987, 1396, 1547
NlaIII CATG 6 cut(s) 154, 756, 972, 1000, 1217, 1517
NlaIV GGNNCC 4 cut(s) 866, 912, 1318, 1381
NmuCI GTSAC 3 cut(s) 416, 887, 1820
PctI GAATGC 1 cut(s) 635
PfeI GAWTC 5 cut(s) 441, 811, 1024, 1293, 1723
PflMI CCANNNNNTGG 1 cut(s) 847
PkrI GCNGC 6 cut(s) 7, 82, 85, 99, 363, 629
PleI GAGTC 1 cut(s) 1042
PpsI GAGTC 1 cut(s) 1042
Psp6I CCWGG 2 cut(s) 198, 444
PspGI CCWGG 2 cut(s) 198, 444
PspN4I GGNNCC 4 cut(s) 866, 912, 1318, 1381
PstI CTGCAG 1 cut(s) 629
PsuI RGATCY 2 cut(s) 18, 910
RsaI GTAC 3 cut(s) 571, 1166, 1325
RsaNI GTAC 3 cut(s) 570, 1165, 1324
RseI CAYNNNNRTG 3 cut(s) 879, 1443, 1647
SaqAI TTAA 3 cut(s) 618, 723, 1407
SatI GCNGC 6 cut(s) 6, 81, 84, 98, 362, 628
Sau3AI GATC 7 cut(s) 18, 208, 505, 910, 987, 1396, 1547
ScaI AGTACT 1 cut(s) 1166
SchI GAGTC 1 cut(s) 1042
ScrFI CCNGG 3 cut(s) 200, 446, 1784
SduI GDGCHC 2 cut(s) 452, 1384
SfaNI GCATC 2 cut(s) 1023, 1669
SfcI CTRYAG 5 cut(s) 313, 589, 625, 796, 1828
SmiMI CAYNNNNRTG 3 cut(s) 879, 1443, 1647
SmlI CTYRAG 2 cut(s) 90, 1259
SmoI CTYRAG 2 cut(s) 90, 1259
SpeI ACTAGT 1 cut(s) 1492
SsiI CCGC 3 cut(s) 6, 555, 1125
SspMI CTAG 7 cut(s) 552, 1209, 1460, 1493, 1760, 1778, 1846
StyD4I CCNGG 3 cut(s) 198, 444, 1782
StyI CCWWGG 3 cut(s) 169, 1297, 1513
TaaI ACNGT 9 cut(s) 133, 244, 459, 569, 657, 965, 1225, 1321, 1557
TaiI ACGT 1 cut(s) 1827
TaqI TCGA 4 cut(s) 304, 990, 1645, 1799
TatI WGTACW 2 cut(s) 1164, 1323
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 5 cut(s) 441, 811, 1024, 1293, 1723
Tru1I TTAA 3 cut(s) 618, 723, 1407
Tru9I TTAA 3 cut(s) 618, 723, 1407
TscAI CASTG 6 cut(s) 247, 585, 848, 1228, 1560, 1608
TseFI GTSAC 3 cut(s) 416, 887, 1820
TseI GCWGC 5 cut(s) 80, 83, 97, 361, 627
Tsp45I GTSAC 3 cut(s) 416, 887, 1820
TspDTI ATGAA 8 cut(s) 391, 628, 957, 1013, 1056, 1495, 1526, 1589
TspRI CASTG 6 cut(s) 247, 585, 848, 1228, 1560, 1608
Van91I CCANNNNNTGG 1 cut(s) 847
XagI CCTNNNNNAGG 1 cut(s) 269
XapI RAATTY 3 cut(s) 398, 511, 943
XcmI CCANNNNNNNNNTGG 1 cut(s) 848
XmiI GTMKAC 1 cut(s) 1827
XspI CTAG 7 cut(s) 552, 1209, 1460, 1493, 1760, 1778, 1846
ZraI GACGTC 1 cut(s) 1825
ZrmI AGTACT 1 cut(s) 1166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.