FvH4_7g31910

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000066
Physical Location & Seq
Reverse (-)
23013835 .. 23016289
2455 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g31910.t1

Sequence Viewer

Length: 2007 bp
ATGTTGACCACGTCCCGAAACTGCTACAACGACACTGTATACAACTCCTCCTTGCACAGAGCCAGTTACCTATATCTTCCGCCTTCTTACACCCTCGCCGACAAAAACAAGGTTTATAACATTGGCTGCAACAAAGCAACGAAGCTCGTAGGTTATCCTCTTCATGTTACAGACCCTGAACAGCTCTTTGAAGTAGCGCTCAGCGGTGTAAGCTTGTGCAACGATGAATTTGGCAAAAGATTCCCCGAGACTTGCACCGGATTCGGATGCTCCGTAAATTCTATCCCTAGTGGACTGCAAAATATTACGGTCGATGTGTGGTCACTCGGTACCGGCCTCGGAACATCGGCGCCGTGGGGACTGAGTTACCCTTGCAGTTACGGCTTCGTTGTGGATGAACGCAACTTTACATTCGCCGGGAATCGAAGTTTTGATGAACTGAATCGCACAAGACAGGAGCTTCCGGTGCTTGCTAGTTGGGCGATTGGGAATGACAACTGCGAAGCAGCAAAGAAGAAGAACGAGACAGCTTTTGCATGCAAGGGTGAGAATACGGAGTGTGTCGACCGCGCTGGTGGTTACTTCTGCCAGTGTTGGGATGGCTACGAAGGGAACCCATACCTCCTCAAAGATTGCGTAGATGTCGATGAGTGCAAGAATAATTCAACCCTTTGCAGTGGTCCTGCAACTTGCGTAAACTCAATTGGAAGTTACAAATGTAAATGTCACAAGGGCTATAGAAATGATGACAACGACAAGAATAAGTGTGTCAAAATCAACGAAACCTCCAGCAAAAATGATACAGAAATGAAAATTTCCTTGGGTGTCTCTTTGAGCTTCCTAGTCATACTGATTATAAATTTTTCGATATACTGCGTACTGAAAAGAAGAAAGTTCAAGCAGCTATGTGACAGGTACTACAAAGACAATGGGGGTTTCTTGTTACCACAAGAAATGCAAAAGTACAAAGGGTCTCAGGCACCCAGAATCTTTAAATTAGAAGAGCTTAAGAAGGCAACCAACAAGTTTGATCCCCATGAAATAATTGGAGAAGGAGGCTTTGGATTGGTTTACAAGGGAACATTGCCGGACAACAAGCAGGTGGTTGCTATAAAGAAGTCAAAAACTGATGCTCCCACCATGACCCCCGAAAGTAGGATCGCCCACACTAAGCAGTTCATTAATGAGATGATTGTTCTCTCTGGAATCAAGCATAGAAATGTCGTGACCCTCTTAGAAAAAGAAAGGCAAAGGACCTCTTTCCTTTGGCAACGAGTGAAGATAGCAGCAGAAACAGCAGGATCCCTGGCATACTTGCACTCCCGCGCTTCTTCCACGCCAATTCTGCACCGAGATGTCAAGGCGACGAACATCCTGCTGGATGAGAATTTGACAGCCAAAGTATCAGACTTTGGAGCTTCAAAATTGGTTCCCGAAGATCAAAATACTCAAATGGCTACTTTAGTGCAAGGGACGCTAGGGTACTTGGACCCTGAATATATTCAGACACACAAACTGACGGAGAAGAGTGATGTCTATAGTTTCGGGGTTGTCCTTGTGGAGCTATTAACGAGTCAAATGGCAATTAATTCCAACAAGAAGCTTGAGGAAGAGAGAAACCTAGCGAACTGTTTTTTAATGGCGGTCGAAGATAATCACTTGGATCAGATTCTTGATCATGAAATTATCAAAGAAGAAAGCTTTGAAATAGCCGAACAAGTAGCCCAACTCGCCCAAAGATGTTTAAGTCCGAAAGGAGGAAATAGGCCTACCATGATAGAAGTAGAAACAGAGGTAGGGGCAATATTGGCAGTTATGGGAAAGCATCCAGGAGGAAAGCCCGACTCCTCCCCCAATGAGATCGATTACTTGCTTGCAGCGTCACCTTCAAATGCTTTCGTTGTTGATGTTAGAAGTGATGAAGGTGAAGTCATAACCAGCATAGATTATGACAAGAGCATGCATAGTCAAGCCCAGATGATGAAGCCTTATGATGGTGGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

669

Amino Acids

74.31

Weight (kDa)

6.08

Isoelectric Point (pI)

34.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EGF_CA PF07645 214 - 253 3.5e-09 Calcium-binding EGF domain
Pkinase PF00069 345 - 418 4.2e-08 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 422 - 597 5.5e-25 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 426 - 595 1.8e-28 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 117, 857
AarI CACCTGC 1 cut(s) 1090
Acc36I ACCTGC 1 cut(s) 1090
Acc65I GGTACC 1 cut(s) 329
AccB1I GGYRCC 3 cut(s) 329, 349, 979
AccI GTMKAC 2 cut(s) 39, 564
AccII CGCG 2 cut(s) 570, 1326
AciI CCGC 5 cut(s) 80, 204, 568, 1324, 1643
AclWI GGATC 5 cut(s) 1025, 1166, 1296, 1309, 1671
AcsI RAATTY 5 cut(s) 227, 277, 813, 859, 1387
AcyI GRCGYC 1 cut(s) 350
AfaI GTAC 5 cut(s) 331, 879, 917, 965, 1484
AfeI AGCGCT 1 cut(s) 198
AfiI CCNNNNNNNGG 4 cut(s) 595, 1155, 1757, 1994
AflII CTTAAG 1 cut(s) 1007
AgsI TTSAA 6 cut(s) 191, 666, 898, 1422, 1706, 1890
AjiI CACGTC 1 cut(s) 12
AjnI CCWGG 2 cut(s) 1305, 1828
AjuI GAANNNNNNNTTGG 4 cut(s) 803, 835, 1044, 1076
Alw26I GTCTC 4 cut(s) 242, 518, 832, 978
AlwI GGATC 5 cut(s) 1025, 1166, 1296, 1309, 1671
AlwNI CAGNNNCTG 1 cut(s) 176
Ama87I CYCGRG 1 cut(s) 245
Aor51HI AGCGCT 1 cut(s) 198
AoxI GGCC 2 cut(s) 334, 1766
ApeKI GCWGC 5 cut(s) 126, 506, 901, 1286, 1877
ApoI RAATTY 5 cut(s) 227, 277, 813, 859, 1387
AseI ATTAAT 2 cut(s) 1182, 1587
Asp700I GAANNNNTTC 1 cut(s) 1500
Asp718I GGTACC 1 cut(s) 329
AspLEI GCGC 4 cut(s) 199, 352, 572, 1328
AspS9I GGNCC 3 cut(s) 680, 1254, 1489
AsuC2I CCSGG 1 cut(s) 418
AsuHPI GGTGA 3 cut(s) 557, 1875, 1937
AvaI CYCGRG 1 cut(s) 245
AvaII GGWCC 3 cut(s) 680, 1254, 1489
BamHI GGATCC 1 cut(s) 1301
BanI GGYRCC 3 cut(s) 329, 349, 979
BbvI GCAGC 5 cut(s) 113, 518, 913, 1298, 1889
BccI CCATC 2 cut(s) 593, 1988
BceAI ACGGC 2 cut(s) 337, 397
BcgI CGANNNNNNTGC 4 cut(s) 244, 278, 1357, 1391
BciT130I CCWGG 2 cut(s) 1307, 1830
BclI TGATCA 1 cut(s) 1675
BcnI CCSGG 1 cut(s) 418
BcoDI GTCTC 4 cut(s) 242, 518, 832, 978
BfaI CTAG 5 cut(s) 288, 474, 842, 1478, 1622
BfmI CTRYAG 2 cut(s) 736, 1537
BfoI RGCGCY 2 cut(s) 200, 353
BfrI CTTAAG 1 cut(s) 1007
BfuAI ACCTGC 1 cut(s) 1090
BisI GCNGC 5 cut(s) 127, 507, 902, 1287, 1878
BlpI GCTNAGC 1 cut(s) 200
BlsI GCNGC 5 cut(s) 128, 508, 903, 1288, 1879
Bme1390I CCNGG 3 cut(s) 418, 1307, 1830
Bme18I GGWCC 3 cut(s) 680, 1254, 1489
BmeT110I CYCGRG 1 cut(s) 245
BmgBI CACGTC 1 cut(s) 12
BmgT120I GGNCC 3 cut(s) 680, 1254, 1489
BmiI GGNNCC 7 cut(s) 331, 351, 614, 981, 1303, 1431, 1491
BmrFI CCNGG 3 cut(s) 418, 1307, 1830
BmsI GCATC 3 cut(s) 257, 1120, 1834
BpmI CTGGAG 1 cut(s) 772
Bpu1102I GCTNAGC 1 cut(s) 200
BpuEI CTTGAG 1 cut(s) 1625
BpuMI CCSGG 1 cut(s) 418
Bsa29I ATCGAT 1 cut(s) 1863
BsaHI GRCGYC 1 cut(s) 350
BsaI GGTCTC 1 cut(s) 978
BsaJI CCNNGG 4 cut(s) 337, 353, 819, 1305
BsaWI WCCGGW 2 cut(s) 257, 463
BsaXI ACNNNNNCTCC 8 cut(s) 32, 62, 770, 800, 1117, 1147, 1304, 1334
Bsc4I CCNNNNNNNGG 4 cut(s) 595, 1155, 1757, 1994
Bse118I RCCGGY 1 cut(s) 332
Bse1I ACTGG 2 cut(s) 63, 589
Bse3DI GCAATG 1 cut(s) 1082
BseBI CCWGG 2 cut(s) 1307, 1830
BseCI ATCGAT 1 cut(s) 1863
BseDI CCNNGG 4 cut(s) 337, 353, 819, 1305
BseGI GGATG 6 cut(s) 272, 400, 604, 1371, 1387, 1825
BseLI CCNNNNNNNGG 4 cut(s) 595, 1155, 1757, 1994
BseMI GCAATG 1 cut(s) 1082
BseMII CTCAG 3 cut(s) 214, 353, 989
BseNI ACTGG 2 cut(s) 63, 589
BseRI GAGGAG 3 cut(s) 37, 614, 1837
BseXI GCAGC 5 cut(s) 113, 518, 913, 1298, 1889
BsgI GTGCAG 1 cut(s) 1331
Bsh1236I CGCG 2 cut(s) 570, 1326
Bsh1285I CGRYCG 3 cut(s) 312, 568, 1647
BshFI GGCC 2 cut(s) 336, 1768
BshNI GGYRCC 3 cut(s) 329, 349, 979
BshVI ATCGAT 1 cut(s) 1863
BsiEI CGRYCG 3 cut(s) 312, 568, 1647
BsiHKCI CYCGRG 1 cut(s) 245
BsiSI CCGG 5 cut(s) 258, 333, 417, 464, 1088
BslFI GGGAC 2 cut(s) 372, 1486
BslI CCNNNNNNNGG 4 cut(s) 595, 1155, 1757, 1994
BsmAI GTCTC 4 cut(s) 242, 518, 832, 978
BsmFI GGGAC 2 cut(s) 372, 1486
BsnI GGCC 2 cut(s) 336, 1768
Bso31I GGTCTC 1 cut(s) 978
BsoBI CYCGRG 1 cut(s) 245
Bsp143I GATC 7 cut(s) 1030, 1158, 1301, 1438, 1663, 1675, 1860
Bsp1720I GCTNAGC 1 cut(s) 200
BspACI CCGC 5 cut(s) 80, 204, 568, 1324, 1643
BspANI GGCC 2 cut(s) 336, 1768
BspCNI CTCAG 3 cut(s) 213, 354, 988
BspDI ATCGAT 1 cut(s) 1863
BspFNI CGCG 2 cut(s) 570, 1326
BspHI TCATGA 1 cut(s) 1678
BspLI GGNNCC 7 cut(s) 331, 351, 614, 981, 1303, 1431, 1491
BspMI ACCTGC 1 cut(s) 1090
BspPI GGATC 5 cut(s) 1025, 1166, 1296, 1309, 1671
BspQI GCTCTTC 1 cut(s) 996
BspT107I GGYRCC 3 cut(s) 329, 349, 979
BspTI CTTAAG 1 cut(s) 1007
BspTNI GGTCTC 1 cut(s) 978
BsrDI GCAATG 1 cut(s) 1082
BsrFI RCCGGY 1 cut(s) 332
BsrI ACTGG 2 cut(s) 63, 589
BssAI RCCGGY 1 cut(s) 332
BssECI CCNNGG 4 cut(s) 337, 353, 819, 1305
BssMI GATC 7 cut(s) 1030, 1158, 1301, 1438, 1663, 1675, 1860
BssNAI GTATAC 1 cut(s) 40
BssNI GRCGYC 1 cut(s) 350
BssT1I CCWWGG 1 cut(s) 819
Bst1107I GTATAC 1 cut(s) 40
Bst2UI CCWGG 2 cut(s) 1307, 1830
Bst4CI ACNGT 3 cut(s) 37, 310, 1631
Bst6I CTCTTC 4 cut(s) 165, 996, 1520, 1605
BstACI GRCGYC 1 cut(s) 350
BstAFI CTTAAG 1 cut(s) 1007
BstC8I GCNNGC 4 cut(s) 471, 538, 1875, 1961
BstDEI CTNAG 5 cut(s) 200, 362, 975, 1170, 1234
BstDSI CCRYGG 1 cut(s) 353
BstF5I GGATG 6 cut(s) 272, 400, 604, 1371, 1387, 1825
BstFNI CGCG 2 cut(s) 570, 1326
BstH2I RGCGCY 2 cut(s) 200, 353
BstHHI GCGC 4 cut(s) 199, 352, 572, 1328
BstKTI GATC 7 cut(s) 1033, 1161, 1304, 1441, 1666, 1678, 1863
BstMAI GTCTC 4 cut(s) 242, 518, 832, 978
BstMBI GATC 7 cut(s) 1030, 1158, 1301, 1438, 1663, 1675, 1860
BstMCI CGRYCG 3 cut(s) 312, 568, 1647
BstMWI GCNNNNNNNGC 9 cut(s) 210, 381, 466, 479, 1295, 1345, 1474, 1730, 1808
BstNI CCWGG 2 cut(s) 1307, 1830
BstNSI RCATGY 2 cut(s) 540, 1963
BstSCI CCNGG 3 cut(s) 416, 1305, 1828
BstSFI CTRYAG 2 cut(s) 736, 1537
BstUI CGCG 2 cut(s) 570, 1326
BstV1I GCAGC 5 cut(s) 113, 518, 913, 1298, 1889
BstX2I RGATCY 1 cut(s) 1301
BstYI RGATCY 1 cut(s) 1301
BstZ17I GTATAC 1 cut(s) 40
Bsu15I ATCGAT 1 cut(s) 1863
BsuRI GGCC 2 cut(s) 336, 1768
BsuTUI ATCGAT 1 cut(s) 1863
BtgI CCRYGG 1 cut(s) 353
BtrI CACGTC 1 cut(s) 12
BtsCI GGATG 6 cut(s) 272, 400, 604, 1371, 1387, 1825
BtsI GCAGTG 1 cut(s) 682
BtsIMutI CAGTG 3 cut(s) 33, 596, 682
BveI ACCTGC 1 cut(s) 1090
Cac8I GCNNGC 4 cut(s) 471, 538, 1875, 1961
CaiI CAGNNNCTG 1 cut(s) 176
CciI TCATGA 1 cut(s) 1678
CfoI GCGC 4 cut(s) 199, 352, 572, 1328
Cfr10I RCCGGY 1 cut(s) 332
Cfr13I GGNCC 3 cut(s) 680, 1254, 1489
ClaI ATCGAT 1 cut(s) 1863
CseI GACGC 2 cut(s) 1483, 1869
Csp6I GTAC 5 cut(s) 330, 878, 916, 964, 1483
CviAII CATG 7 cut(s) 164, 537, 1037, 1141, 1679, 1774, 1960
CviQI GTAC 5 cut(s) 330, 878, 916, 964, 1483
DdeI CTNAG 5 cut(s) 200, 362, 975, 1170, 1234
DinI GGCGCC 1 cut(s) 351
DpnI GATC 7 cut(s) 1032, 1160, 1303, 1440, 1665, 1677, 1862
DpnII GATC 7 cut(s) 1030, 1158, 1301, 1438, 1663, 1675, 1860
DraI TTTAAA 1 cut(s) 994
Eam1104I CTCTTC 4 cut(s) 165, 996, 1520, 1605
EarI CTCTTC 4 cut(s) 165, 996, 1520, 1605
EciI GGCGGA 1 cut(s) 69
Eco130I CCWWGG 1 cut(s) 819
Eco147I AGGCCT 1 cut(s) 1768
Eco31I GGTCTC 1 cut(s) 978
Eco47I GGWCC 3 cut(s) 680, 1254, 1489
Eco47III AGCGCT 1 cut(s) 198
Eco88I CYCGRG 1 cut(s) 245
EcoO109I RGGNCCY 1 cut(s) 1254
EcoRII CCWGG 2 cut(s) 1305, 1828
EcoT14I CCWWGG 1 cut(s) 819
EcoT22I ATGCAT 1 cut(s) 1965
EgeI GGCGCC 1 cut(s) 351
EheI GGCGCC 1 cut(s) 351
ErhI CCWWGG 1 cut(s) 819
FaeI CATG 7 cut(s) 167, 540, 1040, 1144, 1682, 1777, 1963
FalI AAGNNNNNCTT 2 cut(s) 1243, 1275
FaqI GGGAC 2 cut(s) 372, 1486
FatI CATG 7 cut(s) 163, 536, 1036, 1140, 1678, 1773, 1959
FauI CCCGC 1 cut(s) 1331
FbaI TGATCA 1 cut(s) 1675
FblI GTMKAC 2 cut(s) 39, 564
Fnu4HI GCNGC 5 cut(s) 127, 507, 902, 1287, 1878
FokI GGATG 6 cut(s) 279, 407, 611, 1358, 1394, 1812
Fsp4HI GCNGC 5 cut(s) 127, 507, 902, 1287, 1878
FspBI CTAG 5 cut(s) 288, 474, 842, 1478, 1622
GlaI GCGC 4 cut(s) 198, 351, 571, 1327
GluI GCNGC 5 cut(s) 127, 507, 902, 1287, 1878
GsuI CTGGAG 1 cut(s) 772
HaeII RGCGCY 2 cut(s) 200, 353
HaeIII GGCC 2 cut(s) 336, 1768
HapII CCGG 5 cut(s) 258, 333, 417, 464, 1088
HgaI GACGC 2 cut(s) 1483, 1869
HhaI GCGC 4 cut(s) 199, 352, 572, 1328
Hin1I GRCGYC 1 cut(s) 350
Hin1II CATG 7 cut(s) 167, 540, 1040, 1144, 1682, 1777, 1963
Hin6I GCGC 4 cut(s) 197, 350, 570, 1326
HinP1I GCGC 4 cut(s) 197, 350, 570, 1326
HincII GTYRAC 2 cut(s) 6, 565
HindII GTYRAC 2 cut(s) 6, 565
HindIII AAGCTT 3 cut(s) 211, 1601, 1699
HinfI GANTC 9 cut(s) 240, 261, 421, 442, 987, 1206, 1573, 1669, 1844
HpaII CCGG 5 cut(s) 258, 333, 417, 464, 1088
HphI GGTGA 3 cut(s) 557, 1875, 1937
Hpy166II GTNNAC 6 cut(s) 6, 40, 293, 565, 697, 1072
Hpy188I TCNGA 6 cut(s) 266, 341, 1408, 1506, 1668, 1752
Hpy188III TCNNGA 6 cut(s) 15, 1203, 1225, 1433, 1673, 1679
Hpy8I GTNNAC 6 cut(s) 6, 40, 293, 565, 697, 1072
Hpy99I CGWCG 1 cut(s) 1369
HpyAV CCTTC 6 cut(s) 93, 602, 1006, 1046, 1896, 1916
HpyCH4III ACNGT 3 cut(s) 37, 310, 1631
HpyCH4IV ACGT 1 cut(s) 11
HpyF10VI GCNNNNNNNGC 9 cut(s) 210, 381, 466, 479, 1295, 1345, 1474, 1730, 1808
HpyF3I CTNAG 5 cut(s) 200, 362, 975, 1170, 1234
HpySE526I ACGT 1 cut(s) 11
Hsp92I GRCGYC 1 cut(s) 350
Hsp92II CATG 7 cut(s) 167, 540, 1040, 1144, 1682, 1777, 1963
HspAI GCGC 4 cut(s) 197, 350, 570, 1326
KasI GGCGCC 1 cut(s) 349
KpnI GGTACC 1 cut(s) 333
Ksp22I TGATCA 1 cut(s) 1675
Kzo9I GATC 7 cut(s) 1030, 1158, 1301, 1438, 1663, 1675, 1860
LguI GCTCTTC 1 cut(s) 996
LmnI GCTCC 5 cut(s) 275, 457, 1138, 1415, 1561
Lsp1109I GCAGC 5 cut(s) 113, 518, 913, 1298, 1889
LweI GCATC 3 cut(s) 257, 1120, 1834
MaeI CTAG 5 cut(s) 288, 474, 842, 1478, 1622
MaeII ACGT 1 cut(s) 11
MalI GATC 7 cut(s) 1032, 1160, 1303, 1440, 1665, 1677, 1862
MboI GATC 7 cut(s) 1030, 1158, 1301, 1438, 1663, 1675, 1860
MfeI CAATTG 1 cut(s) 702
MflI RGATCY 1 cut(s) 1301
Mly113I GGCGCC 1 cut(s) 350
MlyI GAGTC 2 cut(s) 1582, 1838
MmeI TCCRAC 1 cut(s) 1617
Mph1103I ATGCAT 1 cut(s) 1965
MroXI GAANNNNTTC 1 cut(s) 1500
MseI TTAA 7 cut(s) 993, 1008, 1182, 1568, 1587, 1637, 1745
MslI CAYNNNNRTG 2 cut(s) 1218, 1353
MspA1I CMGCKG 1 cut(s) 204
MspCI CTTAAG 1 cut(s) 1007
MspI CCGG 5 cut(s) 258, 333, 417, 464, 1088
MspR9I CCNGG 3 cut(s) 418, 1307, 1830
MunI CAATTG 1 cut(s) 702
MvaI CCWGG 2 cut(s) 1307, 1830
MvnI CGCG 2 cut(s) 570, 1326
MwoI GCNNNNNNNGC 9 cut(s) 210, 381, 466, 479, 1295, 1345, 1474, 1730, 1808
NarI GGCGCC 1 cut(s) 350
NciI CCSGG 1 cut(s) 418
NdeII GATC 7 cut(s) 1030, 1158, 1301, 1438, 1663, 1675, 1860
NlaIII CATG 7 cut(s) 167, 540, 1040, 1144, 1682, 1777, 1963
NlaIV GGNNCC 7 cut(s) 331, 351, 614, 981, 1303, 1431, 1491
NmuCI GTSAC 5 cut(s) 321, 725, 908, 1225, 1881
NsiI ATGCAT 1 cut(s) 1965
NspI RCATGY 2 cut(s) 540, 1963
PaeI GCATGC 2 cut(s) 540, 1963
PagI TCATGA 1 cut(s) 1678
PaqCI CACCTGC 1 cut(s) 1090
PceI AGGCCT 1 cut(s) 1768
PciSI GCTCTTC 1 cut(s) 996
PcsI WCGNNNNNNNCGW 1 cut(s) 270
PdmI GAANNNNTTC 1 cut(s) 1500
PfeI GAWTC 7 cut(s) 240, 261, 421, 442, 987, 1206, 1669
PflFI GACNNNGTC 1 cut(s) 10
PfoI TCCNGGA 1 cut(s) 1828
PkrI GCNGC 5 cut(s) 128, 508, 903, 1288, 1879
PleI GAGTC 2 cut(s) 1581, 1838
PluTI GGCGCC 1 cut(s) 353
PpsI GAGTC 2 cut(s) 1581, 1838
PpuMI RGGWCCY 1 cut(s) 1254
PshBI ATTAAT 2 cut(s) 1182, 1587
PsiI TTATAA 2 cut(s) 117, 857
Psp5II RGGWCCY 1 cut(s) 1254
Psp6I CCWGG 2 cut(s) 1305, 1828
PspGI CCWGG 2 cut(s) 1305, 1828
PspN4I GGNNCC 7 cut(s) 331, 351, 614, 981, 1303, 1431, 1491
PspPI GGNCC 3 cut(s) 680, 1254, 1489
PspPPI RGGWCCY 1 cut(s) 1254
PstNI CAGNNNCTG 1 cut(s) 176
PsuI RGATCY 1 cut(s) 1301
PsyI GACNNNGTC 1 cut(s) 10
RsaI GTAC 5 cut(s) 331, 879, 917, 965, 1484
RsaNI GTAC 5 cut(s) 330, 878, 916, 964, 1483
RseI CAYNNNNRTG 2 cut(s) 1218, 1353
SalI GTCGAC 1 cut(s) 563
SapI GCTCTTC 1 cut(s) 996
SaqAI TTAA 7 cut(s) 993, 1008, 1182, 1568, 1587, 1637, 1745
SatI GCNGC 5 cut(s) 127, 507, 902, 1287, 1878
Sau3AI GATC 7 cut(s) 1030, 1158, 1301, 1438, 1663, 1675, 1860
Sau96I GGNCC 3 cut(s) 680, 1254, 1489
SchI GAGTC 2 cut(s) 1582, 1838
ScrFI CCNGG 3 cut(s) 418, 1307, 1830
SfaNI GCATC 3 cut(s) 257, 1120, 1834
SfcI CTRYAG 2 cut(s) 736, 1537
SfoI GGCGCC 1 cut(s) 351
SinI GGWCC 3 cut(s) 680, 1254, 1489
SmiMI CAYNNNNRTG 2 cut(s) 1218, 1353
SmlI CTYRAG 2 cut(s) 1007, 1604
SmoI CTYRAG 2 cut(s) 1007, 1604
SphI GCATGC 2 cut(s) 540, 1963
SseBI AGGCCT 1 cut(s) 1768
SsiI CCGC 5 cut(s) 80, 204, 568, 1324, 1643
SspDI GGCGCC 1 cut(s) 349
SspI AATATT 2 cut(s) 304, 1806
SspMI CTAG 5 cut(s) 288, 474, 842, 1478, 1622
StuI AGGCCT 1 cut(s) 1768
StyD4I CCNGG 3 cut(s) 416, 1305, 1828
StyI CCWWGG 1 cut(s) 819
TaaI ACNGT 3 cut(s) 37, 310, 1631
TaiI ACGT 1 cut(s) 14
TaqI TCGA 7 cut(s) 312, 424, 564, 645, 866, 1647, 1863
TatI WGTACW 1 cut(s) 963
TfiI GAWTC 7 cut(s) 240, 261, 421, 442, 987, 1206, 1669
Tru1I TTAA 7 cut(s) 993, 1008, 1182, 1568, 1587, 1637, 1745
Tru9I TTAA 7 cut(s) 993, 1008, 1182, 1568, 1587, 1637, 1745
TscAI CASTG 3 cut(s) 40, 596, 682
TseFI GTSAC 5 cut(s) 321, 725, 908, 1225, 1881
TseI GCWGC 5 cut(s) 126, 506, 901, 1286, 1877
Tsp45I GTSAC 5 cut(s) 321, 725, 908, 1225, 1881
TspGWI ACGGA 3 cut(s) 262, 569, 1535
TspRI CASTG 3 cut(s) 40, 596, 682
Tth111I GACNNNGTC 1 cut(s) 10
Vha464I CTTAAG 1 cut(s) 1007
VpaK11BI GGWCC 3 cut(s) 680, 1254, 1489
VspI ATTAAT 2 cut(s) 1182, 1587
XapI RAATTY 5 cut(s) 227, 277, 813, 859, 1387
XceI RCATGY 2 cut(s) 540, 1963
XcmI CCANNNNNNNNNTGG 2 cut(s) 596, 1043
XmiI GTMKAC 2 cut(s) 39, 564
XmnI GAANNNNTTC 1 cut(s) 1500
XspI CTAG 5 cut(s) 288, 474, 842, 1478, 1622
Zsp2I ATGCAT 1 cut(s) 1965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.