Rmu_sc0006106.1_g000011

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006106.1
OG0000066
Physical Location & Seq
Reverse (-)
39289 .. 42817
3529 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006106.1_g000011.1.cds

Sequence Viewer

Length: 2352 bp
atgaaggaagtggcaatggagcttgatggactgagaaggatggtaatgcctccaggggttaataatgatgaatccaatgcagaggagaatgaacacttgcttggtgaaataacactggaaacttttactcatggagtactagtagccacagcagcacaagcacaagtagctgatcaatatgcgaagcctggttgcgaagctacctgtggaaatgttagcataccataccctttcggtaccagagaggcttattgttaccatgatgaagagttccgtataacttgcaactccacatatgaccctccgaaactatttctgtatggaagcaatattgaggtcacaaacatttctgttgatggcaagttgaatatcatgcaatacatagctcatgattgctacgaatcatctggtctccgtgtcaagaacaattctccagggctccgcctttcaaaattcatcatctccaacactgataataagttcattgcagttgggtgtgacacttatgcagaaattcgaggcttccagggcaaaatcaagaagtacacaggtggctgcatatcaatatgtgacagcattgattatgttgccaatgattcatgctccggtatagggtgttgccagacatcaattgctaaaggtgtgagctcttttgaagtgtttgtggacagttctcggaatcatacagatgtttggtctttcaatccatgcagcttcgcctttgttgtggaagaaagcaagttcaacttctccagagctatgctcatgaatttaaaggatgaaagagtacttcctgctgtgcttgattggtcaattggaaatgagacttgcaagcaagttgaaggcaaaatgatatccggcagcgcgtgccaggggaacagcacatgtgttgatgttgaaaatgggtctggataccgatgcaaatgcaaggatggttatcaagggaacccatacctctctaatggttgtcaagatattgatgaatgtgagaatccaaaactccataactgtgcacaaggatgtgtaaatacagagggaagtcatcactgtccttgccgcaaagggtaccatggcaatggtatagttggggaagaaggttgcatagctaacagaacattagttgttcaaatcactgttggaattgctgtcggcctcatatcgttgctaatgtgtagctcttggttatatctgggctacagaagatggaaactcatgaagctgaaggagagattcttcagacaaaatggaggattattgttacaacaacaactttcgaaacgacaaggtggtgccactaaccaaaatgcaaaaatctttaccgcagaagaacttgagaaggccaccaacaactaccatgagactagaatcgttggcaaaggaggctacggtacagtgtacaaaggaattttatcagatggaagagtagttgcaatcaagaaatccaaaatagttgatcaaagccaaatagagcaattcattaatgaagtactggtgctttcccaaatcaatcacaggaatgtggtgaagcttttgggttgttgtttcgagacagaagtcccacgactagtttatgagtttgtcaccaatggtacgctattcgactacatccacaacaaaagcaaggcatccaactttgcttgggagactcgtttaaggatagctgcagaagctgctggagtgctatcatacttgcactcagcagcttctgtccctattatccatagagatgtcaagtccacaaatatacttttagatgaaacccttacagcaaaagtgtctgattttggtgcctccagattggtaccattggatcaaactgaattatcaacaatggtacaaggcacgcttgggtacttagaccctgaatacttacaaactagccagttgactgacaagagtgatgtctatagctttggggttgtccttgtagagctactaacaggaaagaaggcgctttcgttcgacaagcaagaggaggttaaaaatctatccatgtattttctctccgcgctgaaagaaaaccgcttggtacaagtgattgatgagtgtgttctgaatggggcaaatgatgagcagcttaaggaagtttctaaccttgcaaagaggtgtttgaaagtgaaaggagaagaaagaccaaccatgatggaagtagcaagcgagcttgagggactaagaaggatggcaatgcatcatccctgggttaataatgatgaatccaatgcacaggagaatgaaagcttgcttggtgaaatatcactggaaacgtttagtcatggaggtggtgacgatacgagttatgggtacgataccatgaggaaccacatcatattaccagtaaatgatgggagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase WAK

Protein Analysis

783

Amino Acids

86.76

Weight (kDa)

5.53

Isoelectric Point (pI)

30.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 3 cut(s) 236, 1065, 1801
AccB1I GGYRCC 5 cut(s) 236, 1065, 1289, 1787, 1801
AccII CGCG 2 cut(s) 866, 2009
AciI CCGC 5 cut(s) 442, 1057, 1320, 2007, 2023
AclI AACGTT 1 cut(s) 2264
AclWI GGATC 1 cut(s) 1818
AcsI RAATTY 4 cut(s) 452, 513, 769, 1404
AcuI CTGAAG 2 cut(s) 1219, 1241
AfiI CCNNNNNNNGG 1 cut(s) 612
AflII CTTAAG 1 cut(s) 2078
AflIII ACRYGT 1 cut(s) 884
AgsI TTSAA 9 cut(s) 367, 450, 656, 703, 745, 842, 899, 1127, 2113
AhlI ACTAGT 2 cut(s) 139, 1564
AjnI CCWGG 6 cut(s) 52, 187, 433, 525, 870, 2195
AjuI GAANNNNNNNTTGG 4 cut(s) 84, 116, 2226, 2258
Alw21I GWGCWC 2 cut(s) 650, 1015
Alw26I GTCTC 5 cut(s) 416, 818, 1352, 1541, 1637
Alw44I GTGCAC 1 cut(s) 1011
AlwI GGATC 1 cut(s) 1818
AlwNI CAGNNNCTG 2 cut(s) 1670, 1706
AoxI GGCC 2 cut(s) 1150, 1338
ApaLI GTGCAC 1 cut(s) 1011
ApeKI GCWGC 8 cut(s) 152, 555, 711, 861, 1661, 1670, 1700, 2074
ApoI RAATTY 4 cut(s) 452, 513, 769, 1404
AseI ATTAAT 1 cut(s) 1479
Asp718I GGTACC 3 cut(s) 236, 1065, 1801
AspLEI GCGC 3 cut(s) 866, 1954, 2011
AsuHPI GGTGA 5 cut(s) 116, 1534, 1573, 2258, 2294
AsuII TTCGAA 1 cut(s) 1274
BaeGI GKGCMC 1 cut(s) 1015
BanI GGYRCC 5 cut(s) 236, 1065, 1289, 1787, 1801
BanII GRGCYC 2 cut(s) 441, 650
Bbv12I GWGCWC 2 cut(s) 650, 1015
BbvI GCAGC 8 cut(s) 164, 542, 723, 873, 1648, 1657, 1712, 2086
BccI CCATC 9 cut(s) 20, 34, 350, 926, 1197, 1409, 2137, 2173, 2336
BcgI CGANNNNNNTGC 2 cut(s) 906, 940
BciT130I CCWGG 6 cut(s) 54, 189, 435, 527, 872, 2197
BciVI GTATCC 1 cut(s) 905
BclI TGATCA 2 cut(s) 172, 1453
BcoDI GTCTC 5 cut(s) 416, 818, 1352, 1541, 1637
BcuI ACTAGT 2 cut(s) 139, 1564
BfaI CTAG 4 cut(s) 140, 1362, 1565, 1878
BfmI CTRYAG 3 cut(s) 1195, 1662, 1906
BfoI RGCGCY 1 cut(s) 1955
BfrI CTTAAG 1 cut(s) 2078
BfuI GTATCC 1 cut(s) 905
BisI GCNGC 9 cut(s) 153, 556, 712, 862, 1057, 1662, 1671, 1701, 2075
BlsI GCNGC 9 cut(s) 154, 557, 713, 863, 1058, 1663, 1672, 1702, 2076
BmcAI AGTACT 3 cut(s) 138, 789, 1488
Bme1390I CCNGG 6 cut(s) 54, 189, 435, 527, 872, 2197
BmiI GGNNCC 8 cut(s) 238, 440, 947, 1067, 1291, 1789, 1803, 2318
BmrFI CCNGG 6 cut(s) 54, 189, 435, 527, 872, 2197
BmsI GCATC 3 cut(s) 908, 1634, 2197
BoxI GACNNNNGTC 1 cut(s) 1553
BplI GAGNNNNNCTC 2 cut(s) 747, 779
BpmI CTGGAG 5 cut(s) 36, 417, 736, 1695, 1777
Bpu14I TTCGAA 1 cut(s) 1274
BpuEI CTTGAG 2 cut(s) 1352, 2183
BsaBI GATNNNNATC 1 cut(s) 936
BsaI GGTCTC 1 cut(s) 416
BsaJI CCNNGG 7 cut(s) 53, 434, 526, 871, 1069, 2195, 2196
BsaWI WCCGGW 1 cut(s) 605
BsaXI ACNNNNNCTCC 2 cut(s) 126, 156
Bsc4I CCNNNNNNNGG 1 cut(s) 612
Bse1I ACTGG 5 cut(s) 120, 1494, 1882, 2262, 2333
Bse3DI GCAATG 4 cut(s) 21, 483, 1081, 2190
Bse8I GATNNNNATC 1 cut(s) 936
BseBI CCWGG 6 cut(s) 54, 189, 435, 527, 872, 2197
BseDI CCNNGG 7 cut(s) 53, 434, 526, 871, 1069, 2195, 2196
BseGI GGATG 8 cut(s) 45, 784, 937, 1025, 1605, 1625, 2184, 2191
BseJI GATNNNNATC 1 cut(s) 936
BseLI CCNNNNNNNGG 1 cut(s) 612
BseMI GCAATG 4 cut(s) 21, 483, 1081, 2190
BseMII CTCAG 2 cut(s) 23, 1710
BseNI ACTGG 5 cut(s) 120, 1494, 1882, 2262, 2333
BseRI GAGGAG 2 cut(s) 98, 1988
BseSI GKGCMC 1 cut(s) 1015
BseXI GCAGC 8 cut(s) 164, 542, 723, 873, 1648, 1657, 1712, 2086
Bsh1236I CGCG 2 cut(s) 866, 2009
BshFI GGCC 2 cut(s) 1152, 1340
BshNI GGYRCC 5 cut(s) 236, 1065, 1289, 1787, 1801
BsiHKAI GWGCWC 2 cut(s) 650, 1015
BsiSI CCGG 2 cut(s) 606, 858
BslFI GGGAC 3 cut(s) 1541, 1694, 2181
BslI CCNNNNNNNGG 1 cut(s) 612
BsmAI GTCTC 5 cut(s) 416, 818, 1352, 1541, 1637
BsmFI GGGAC 3 cut(s) 1541, 1694, 2181
BsnI GGCC 2 cut(s) 1152, 1340
Bso31I GGTCTC 1 cut(s) 416
Bsp119I TTCGAA 1 cut(s) 1274
Bsp1286I GDGCHC 3 cut(s) 441, 650, 1015
Bsp1407I TGTACA 1 cut(s) 1395
Bsp143I GATC 3 cut(s) 172, 1453, 1810
Bsp19I CCATGG 1 cut(s) 1069
BspACI CCGC 5 cut(s) 442, 1057, 1320, 2007, 2023
BspANI GGCC 2 cut(s) 1152, 1340
BspCNI CTCAG 2 cut(s) 24, 1709
BspFNI CGCG 2 cut(s) 866, 2009
BspHI TCATGA 3 cut(s) 388, 765, 1212
BspLI GGNNCC 8 cut(s) 238, 440, 947, 1067, 1291, 1789, 1803, 2318
BspMAI CTGCAG 1 cut(s) 1666
BspPI GGATC 1 cut(s) 1818
BspT104I TTCGAA 1 cut(s) 1274
BspT107I GGYRCC 5 cut(s) 236, 1065, 1289, 1787, 1801
BspTI CTTAAG 1 cut(s) 2078
BspTNI GGTCTC 1 cut(s) 416
BsrDI GCAATG 4 cut(s) 21, 483, 1081, 2190
BsrGI TGTACA 1 cut(s) 1395
BsrI ACTGG 5 cut(s) 120, 1494, 1882, 2262, 2333
BssECI CCNNGG 7 cut(s) 53, 434, 526, 871, 1069, 2195, 2196
BssMI GATC 3 cut(s) 172, 1453, 1810
BssT1I CCWWGG 1 cut(s) 1069
Bst2UI CCWGG 6 cut(s) 54, 189, 435, 527, 872, 2197
Bst4CI ACNGT 6 cut(s) 671, 1010, 1049, 1135, 1388, 1393
Bst6I CTCTTC 2 cut(s) 261, 1414
BstAFI CTTAAG 1 cut(s) 2078
BstAPI GCANNNNNTGC 2 cut(s) 867, 1670
BstAUI TGTACA 1 cut(s) 1395
BstBI TTCGAA 1 cut(s) 1274
BstC8I GCNNGC 6 cut(s) 833, 868, 1844, 2155, 2159, 2240
BstDEI CTNAG 4 cut(s) 32, 1696, 1855, 2171
BstDSI CCRYGG 1 cut(s) 1069
BstF5I GGATG 8 cut(s) 45, 784, 937, 1025, 1605, 1625, 2184, 2191
BstFNI CGCG 2 cut(s) 866, 2009
BstH2I RGCGCY 1 cut(s) 1955
BstHHI GCGC 3 cut(s) 866, 1954, 2011
BstKTI GATC 3 cut(s) 175, 1456, 1813
BstMAI GTCTC 5 cut(s) 416, 818, 1352, 1541, 1637
BstMBI GATC 3 cut(s) 172, 1453, 1810
BstMWI GCNNNNNNNGC 8 cut(s) 152, 158, 167, 528, 867, 1380, 1667, 1670
BstNI CCWGG 6 cut(s) 54, 189, 435, 527, 872, 2197
BstNSI RCATGY 1 cut(s) 888
BstPAI GACNNNNGTC 1 cut(s) 1553
BstSCI CCNGG 6 cut(s) 52, 187, 433, 525, 870, 2195
BstSFI CTRYAG 3 cut(s) 1195, 1662, 1906
BstSLI GKGCMC 1 cut(s) 1015
BstUI CGCG 2 cut(s) 866, 2009
BstV1I GCAGC 8 cut(s) 164, 542, 723, 873, 1648, 1657, 1712, 2086
BstXI CCANNNNNNTGG 1 cut(s) 1076
BsuI GTATCC 1 cut(s) 905
BsuRI GGCC 2 cut(s) 1152, 1340
BtgI CCRYGG 1 cut(s) 1069
BtsCI GGATG 8 cut(s) 45, 784, 937, 1025, 1605, 1625, 2184, 2191
BtsIMutI CAGTG 6 cut(s) 113, 468, 1045, 1131, 1398, 2255
Cac8I GCNNGC 6 cut(s) 833, 868, 1844, 2155, 2159, 2240
CaiI CAGNNNCTG 2 cut(s) 1670, 1706
CciI TCATGA 3 cut(s) 388, 765, 1212
CfoI GCGC 3 cut(s) 866, 1954, 2011
DdeI CTNAG 4 cut(s) 32, 1696, 1855, 2171
DpnI GATC 3 cut(s) 174, 1455, 1812
DpnII GATC 3 cut(s) 172, 1453, 1810
DraI TTTAAA 1 cut(s) 774
Eam1104I CTCTTC 2 cut(s) 261, 1414
EarI CTCTTC 2 cut(s) 261, 1414
EciI GGCGGA 1 cut(s) 431
Ecl136II GAGCTC 1 cut(s) 648
Eco130I CCWWGG 1 cut(s) 1069
Eco24I GRGCYC 2 cut(s) 441, 650
Eco31I GGTCTC 1 cut(s) 416
Eco32I GATATC 1 cut(s) 855
Eco53kI GAGCTC 1 cut(s) 648
Eco57I CTGAAG 2 cut(s) 1219, 1241
EcoICRI GAGCTC 1 cut(s) 648
EcoRII CCWGG 6 cut(s) 52, 187, 433, 525, 870, 2195
EcoRV GATATC 1 cut(s) 855
EcoT14I CCWWGG 1 cut(s) 1069
EcoT22I ATGCAT 1 cut(s) 2190
EcoT38I GRGCYC 2 cut(s) 441, 650
ErhI CCWWGG 1 cut(s) 1069
FalI AAGNNNNNCTT 4 cut(s) 731, 763, 1830, 1862
FaqI GGGAC 3 cut(s) 1541, 1694, 2181
FauNDI CATATG 1 cut(s) 295
FbaI TGATCA 2 cut(s) 172, 1453
Fnu4HI GCNGC 9 cut(s) 153, 556, 712, 862, 1057, 1662, 1671, 1701, 2075
FokI GGATG 8 cut(s) 52, 791, 944, 1032, 1592, 1612, 2178, 2191
FriOI GRGCYC 2 cut(s) 441, 650
Fsp4HI GCNGC 9 cut(s) 153, 556, 712, 862, 1057, 1662, 1671, 1701, 2075
FspBI CTAG 4 cut(s) 140, 1362, 1565, 1878
GlaI GCGC 3 cut(s) 865, 1953, 2010
GluI GCNGC 9 cut(s) 153, 556, 712, 862, 1057, 1662, 1671, 1701, 2075
GsuI CTGGAG 5 cut(s) 36, 417, 736, 1695, 1777
HaeII RGCGCY 1 cut(s) 1955
HaeIII GGCC 2 cut(s) 1152, 1340
HapII CCGG 2 cut(s) 606, 858
HhaI GCGC 3 cut(s) 866, 1954, 2011
Hin6I GCGC 3 cut(s) 864, 1952, 2009
HinP1I GCGC 3 cut(s) 864, 1952, 2009
HincII GTYRAC 1 cut(s) 1887
HindII GTYRAC 1 cut(s) 1887
HindIII AAGCTT 2 cut(s) 1526, 2236
HinfI GANTC 9 cut(s) 71, 401, 596, 679, 991, 1230, 1365, 1645, 2213
HpaII CCGG 2 cut(s) 606, 858
HphI GGTGA 5 cut(s) 116, 1534, 1573, 2258, 2294
Hpy166II GTNNAC 6 cut(s) 546, 667, 1013, 1396, 1737, 1887
Hpy188I TCNGA 6 cut(s) 306, 678, 1238, 1414, 1780, 2055
Hpy8I GTNNAC 6 cut(s) 546, 667, 1013, 1396, 1737, 1887
HpyAV CCTTC 7 cut(s) 30, 836, 1088, 1216, 1330, 1942, 2169
HpyCH4III ACNGT 6 cut(s) 671, 1010, 1049, 1135, 1388, 1393
HpyCH4IV ACGT 1 cut(s) 2264
HpyF10VI GCNNNNNNNGC 8 cut(s) 152, 158, 167, 528, 867, 1380, 1667, 1670
HpyF3I CTNAG 4 cut(s) 32, 1696, 1855, 2171
HpySE526I ACGT 1 cut(s) 2264
HspAI GCGC 3 cut(s) 864, 1952, 2009
KpnI GGTACC 3 cut(s) 240, 1069, 1805
Ksp22I TGATCA 2 cut(s) 172, 1453
Kzo9I GATC 3 cut(s) 172, 1453, 1810
LmnI GCTCC 3 cut(s) 19, 444, 608
Lsp1109I GCAGC 8 cut(s) 164, 542, 723, 873, 1648, 1657, 1712, 2086
LweI GCATC 3 cut(s) 908, 1634, 2197
MaeI CTAG 4 cut(s) 140, 1362, 1565, 1878
MaeII ACGT 1 cut(s) 2264
MaeIII GTNAC 7 cut(s) 254, 337, 497, 569, 1257, 1579, 2282
MalI GATC 3 cut(s) 174, 1455, 1812
MboI GATC 3 cut(s) 172, 1453, 1810
MboII GAAGA 8 cut(s) 278, 743, 1103, 1212, 1225, 1337, 1431, 2138
MfeI CAATTG 2 cut(s) 630, 813
MhlI GDGCHC 3 cut(s) 441, 650, 1015
MlyI GAGTC 1 cut(s) 1639
MmeI TCCRAC 3 cut(s) 489, 1117, 1653
Mph1103I ATGCAT 1 cut(s) 2190
MseI TTAA 7 cut(s) 60, 773, 1479, 1652, 1980, 2079, 2202
MslI CAYNNNNRTG 7 cut(s) 687, 1008, 1018, 1074, 1515, 1725, 2277
MspCI CTTAAG 1 cut(s) 2078
MspI CCGG 2 cut(s) 606, 858
MspR9I CCNGG 6 cut(s) 54, 189, 435, 527, 872, 2197
MunI CAATTG 2 cut(s) 630, 813
MvaI CCWGG 6 cut(s) 54, 189, 435, 527, 872, 2197
MvnI CGCG 2 cut(s) 866, 2009
MwoI GCNNNNNNNGC 8 cut(s) 152, 158, 167, 528, 867, 1380, 1667, 1670
NcoI CCATGG 1 cut(s) 1069
NdeI CATATG 1 cut(s) 295
NdeII GATC 3 cut(s) 172, 1453, 1810
NlaIV GGNNCC 8 cut(s) 238, 440, 947, 1067, 1291, 1789, 1803, 2318
NmuCI GTSAC 5 cut(s) 337, 497, 569, 1579, 2282
NsiI ATGCAT 1 cut(s) 2190
NspI RCATGY 1 cut(s) 888
NspV TTCGAA 1 cut(s) 1274
PagI TCATGA 3 cut(s) 388, 765, 1212
PasI CCCWGGG 1 cut(s) 2196
PciI ACATGT 1 cut(s) 884
PfeI GAWTC 8 cut(s) 71, 401, 596, 679, 991, 1230, 1365, 2213
PkrI GCNGC 9 cut(s) 154, 557, 713, 863, 1058, 1663, 1672, 1702, 2076
PleI GAGTC 1 cut(s) 1639
PpsI GAGTC 1 cut(s) 1639
PscI ACATGT 1 cut(s) 884
PshAI GACNNNNGTC 1 cut(s) 1553
PshBI ATTAAT 1 cut(s) 1479
Psp124BI GAGCTC 1 cut(s) 650
Psp1406I AACGTT 1 cut(s) 2264
Psp6I CCWGG 6 cut(s) 52, 187, 433, 525, 870, 2195
PspGI CCWGG 6 cut(s) 52, 187, 433, 525, 870, 2195
PspN4I GGNNCC 8 cut(s) 238, 440, 947, 1067, 1291, 1789, 1803, 2318
PstI CTGCAG 1 cut(s) 1666
PstNI CAGNNNCTG 2 cut(s) 1670, 1706
RseI CAYNNNNRTG 7 cut(s) 687, 1008, 1018, 1074, 1515, 1725, 2277
SacI GAGCTC 1 cut(s) 650
SaqAI TTAA 7 cut(s) 60, 773, 1479, 1652, 1980, 2079, 2202
SatI GCNGC 9 cut(s) 153, 556, 712, 862, 1057, 1662, 1671, 1701, 2075
Sau3AI GATC 3 cut(s) 172, 1453, 1810
ScaI AGTACT 3 cut(s) 138, 789, 1488
SchI GAGTC 1 cut(s) 1639
ScrFI CCNGG 6 cut(s) 54, 189, 435, 527, 872, 2197
SduI GDGCHC 3 cut(s) 441, 650, 1015
SfaNI GCATC 3 cut(s) 908, 1634, 2197
SfcI CTRYAG 3 cut(s) 1195, 1662, 1906
SfuI TTCGAA 1 cut(s) 1274
SmiMI CAYNNNNRTG 7 cut(s) 687, 1008, 1018, 1074, 1515, 1725, 2277
SmlI CTYRAG 3 cut(s) 1331, 2078, 2162
SmoI CTYRAG 3 cut(s) 1331, 2078, 2162
SpeI ACTAGT 2 cut(s) 139, 1564
SsiI CCGC 5 cut(s) 442, 1057, 1320, 2007, 2023
SspI AATATT 1 cut(s) 331
SspMI CTAG 4 cut(s) 140, 1362, 1565, 1878
SstI GAGCTC 1 cut(s) 650
StyD4I CCNGG 6 cut(s) 52, 187, 433, 525, 870, 2195
StyI CCWWGG 1 cut(s) 1069
TaaI ACNGT 6 cut(s) 671, 1010, 1049, 1135, 1388, 1393
TaiI ACGT 1 cut(s) 2267
TaqI TCGA 5 cut(s) 517, 1274, 1545, 1599, 1962
TatI WGTACW 5 cut(s) 136, 543, 787, 1395, 1486
TauI GCSGC 1 cut(s) 1059
TfiI GAWTC 8 cut(s) 71, 401, 596, 679, 991, 1230, 1365, 2213
Tru1I TTAA 7 cut(s) 60, 773, 1479, 1652, 1980, 2079, 2202
Tru9I TTAA 7 cut(s) 60, 773, 1479, 1652, 1980, 2079, 2202
TscAI CASTG 6 cut(s) 120, 475, 1052, 1138, 1398, 2262
TseFI GTSAC 5 cut(s) 337, 497, 569, 1579, 2282
TseI GCWGC 8 cut(s) 152, 555, 711, 861, 1661, 1670, 1700, 2074
Tsp45I GTSAC 5 cut(s) 337, 497, 569, 1579, 2282
TspGWI ACGGA 2 cut(s) 263, 404
TspRI CASTG 6 cut(s) 120, 475, 1052, 1138, 1398, 2262
Vha464I CTTAAG 1 cut(s) 2078
VneI GTGCAC 1 cut(s) 1011
VspI ATTAAT 1 cut(s) 1479
XapI RAATTY 4 cut(s) 452, 513, 769, 1404
XceI RCATGY 1 cut(s) 888
XspI CTAG 4 cut(s) 140, 1362, 1565, 1878
ZrmI AGTACT 3 cut(s) 138, 789, 1488
Zsp2I ATGCAT 1 cut(s) 2190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.