Rh6DG467400

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
63494166 .. 63497329
3164 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG467400.1

Sequence Viewer

Length: 2259 bp
ATGTCTATGAGGATAAAGAAAATGTTTTTGCTGCAATTGGTGCTGGTTGCAATAGAGGTGCTACTAGTATCATCCCAAACAGTGGATATTACAAGAGAGGGTTGCCAAGACAAATGTGGCAATGTTAGCATTCCCTACCCGTTCGGAACAAGAGAGGGTTGTTACTATGATGAGGATTTCCTCATTACTTGTAATAGCACAAGTTATAACCCTCCGAAGCCATTTCTGAGAAAGAGTGACATTGAGGTCACAAACATATCCATTGATGGGAAGCTCTACATTACTCAAGACATAGCCATGGCTTGTTATACCAAATCAGGTGTGCCCAGCTGGGACGGCAGCTACAGCCCTTATCTTTCTTTGAAAAAGTTCTACATCTCAGACACCGATAACAAATTCATAGGTGTTGGTTGCGACACCTATGCCGAAATTAGGGGCTTCCAGGGTACAAGCCATGAGTACACAGGTGGGTGCTTGTCGAAATGTTATAGCACTGCCTTTTTCTCCAATTATTCATGCTCTGGCATAGGCTGTTGCGAAACACCTATTGCTAAAGGAATGACATACTTTGACATAAGCGTAAGCAGCTACGAAAACCAAACGAAAGTTTGGAACTTCAATCCCTGCAGCTATGCTTTTCTTGTCCAAGAGGGTAAGTTCAACTTCACCTCCGACATGTTGAGTGATTTAAGAAATATCTCTCAGTTTCCCGTGGTCCTCGATTGGTCAATTGGAAATGAGACATGCAGCCAGATCAATAACAATGCATGTAAGGGGAACAGCAAGTGTGTGGCTGTCGAGAATGGGCTCGGGTATCGCTGCAAGTGCAACGAAGGTTACGAAGGGAATCCATACCTAAATGGCTGCACTGACACGAATGAATGCGAGGATCCGGTAATTGCCAAGAAGTGCAAACAAAGATGCATAAATACAGAGGGGAACTATACTTGTGCTTGCCACAAGGGGTACCATAACAATGGCACAGCAGACTCGGTAGATTGTATCGCTGACCAAAAATTTGTTCAAATTATAGTTGGACTCGGTGTTGGCCTCATATCCTTATTAATAGGCAGCTCCTGGTTGTACTTGGTCTACAAAAGATGGAAGCTCATGAAGGTGAAGGAGAAGTTCTTCATCCAAAATGGAGGATTGTTGTTAAAGCAACAGCTTTCGAAACGACAAGGTGGTGCCACTAACCAAACGGCCAAAATCTTCACGGAAGACCAACTTAAGAAGGCTACCAACCATTTCAGTGAAGCCAGAATCGTTGGCAAAGGAGGTTTCGGTACAGTCTACAAAGGGATTATAGCAGATGAAAGAGCTAAGGAAACAGTGATTGCAATCAAGAAATCCAAACTTGTGGATCGAAGCCAAATAGAGCAATTCATTAATGAAGTACAGGTGCTTTCCCAAATCAATCACAGGAATGTGGTGAAGCTTTTGGGTTGTTGTTTCGAGACAGAAGTCCCACTACTAGTTTATGAGTTTGTCACCAATGGTACGCTATTCGACTACATCCACAACAAAAGCAAGGCATCCAACTTTGCTTGGGAAATTCGTTTAAGGATAGCTGCAGAAACTGCTGGAGTGCTATCACACTTGCACTCTGAAGCTTCTATTCCCATCATTCACAGAGATGTCAAGTCCACAAACATACTCTTGGATGATAATCTTACAGCAAAAGTGTCTGATTTCGGTGCCTCGAGATTGGTTCCGTCAGATCAAGCTCAGCTATCTACAGTGGTGCAAGGAACGGTAGGGTATTTAGACCCTGAATACTTGCAGACGAGCCAGTTGACGGACAAGAGTGATGTCTATAGCTTTGGGGTTGTTCTGGTGGAACTACTAACAGGAAAGAAGGCGCTTTCGTTTGACAAGCCGGAGAAGGAGAGAAATCTAGCCATGTATTTTCTTTCTGCCCTGAGAGAGGACCGATTGGTAGAGGTAATTGATGGTAGTGTCATGAACGGAGCAAACGTTGAGCAGCTTAAGGAAGTTTCTAACCTTGCAAAGAGGTGTTTGAAAGTAAAAGGAAAAGAAAGACCAACCATGAAGGAAGTGGCAATGGAGCTCGAGGGACTGAGAAGGATGGTAATGCATCCATGGGTTAATAATGATGAATCCAATGCAGAGGAGAATGAACAATTGCTTGGTGAAATAAGACTGGAAACTTTTAGTCATGAAGGTGGTGGGGATACGAGTTCTGGGTATGATACCATGAGGAACCAGATCACATTACCAGTTGATGATGGGAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

752

Amino Acids

83.87

Weight (kDa)

6.0

Isoelectric Point (pI)

30.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 90 8.7e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 418 - 687 1.1e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 421 - 691 7.3e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 207
AasI GACNNNNNNGTC 1 cut(s) 245
Acc65I GGTACC 1 cut(s) 966
AccB1I GGYRCC 3 cut(s) 966, 1187, 1697
AccB7I CCANNNNNTGG 1 cut(s) 82
AccI GTMKAC 2 cut(s) 1092, 1293
AclI AACGTT 1 cut(s) 1977
AclWI GGATC 3 cut(s) 884, 897, 1371
AcoI YGGCCR 1 cut(s) 1203
AcsI RAATTY 3 cut(s) 395, 1016, 1554
AcuI CTGAAG 1 cut(s) 1629
AfaI GTAC 7 cut(s) 448, 461, 968, 1085, 1288, 1398, 1501
AfiI CCNNNNNNNGG 5 cut(s) 82, 267, 432, 1798, 1927
AflII CTTAAG 2 cut(s) 1229, 1988
AflIII ACRYGT 1 cut(s) 675
AgsI TTSAA 5 cut(s) 364, 619, 661, 1025, 2023
AhlI ACTAGT 2 cut(s) 64, 1474
AjnI CCWGG 2 cut(s) 441, 1076
AjuI GAANNNNNNNTTGG 4 cut(s) 1005, 1037, 2133, 2165
Alw21I GWGCWC 1 cut(s) 2073
Alw26I GTCTC 2 cut(s) 734, 1451
AlwI GGATC 3 cut(s) 884, 897, 1371
AlwNI CAGNNNCTG 2 cut(s) 1077, 1580
Ama87I CYCGRG 3 cut(s) 809, 1702, 2072
AoxI GGCC 2 cut(s) 1048, 1203
ApoI RAATTY 3 cut(s) 395, 1016, 1554
ArsI GACNNNNNNTTYG 2 cut(s) 1001, 1033
AseI ATTAAT 2 cut(s) 1064, 1389
Asp700I GAANNNNTTC 2 cut(s) 368, 1130
Asp718I GGTACC 1 cut(s) 966
AspLEI GCGC 1 cut(s) 1864
AspS9I GGNCC 2 cut(s) 715, 1930
AsuHPI GGTGA 5 cut(s) 658, 1129, 1444, 1483, 2165
AsuII TTCGAA 1 cut(s) 1172
AvaI CYCGRG 3 cut(s) 809, 1702, 2072
AvaII GGWCC 2 cut(s) 715, 1930
BaeGI GKGCMC 1 cut(s) 327
BamHI GGATCC 1 cut(s) 889
BanI GGYRCC 3 cut(s) 966, 1187, 1697
BanII GRGCYC 2 cut(s) 810, 2073
BarI GAAGNNNNNNTAC 2 cut(s) 1455, 1487
BbsI GAAGAC 1 cut(s) 1227
Bbv12I GWGCWC 1 cut(s) 2073
BccI CCATC 6 cut(s) 260, 1095, 1631, 1946, 2083, 2243
BceAI ACGGC 2 cut(s) 352, 1218
BcgI CGANNNNNNTGC 2 cut(s) 404, 438
BciT130I CCWGG 2 cut(s) 443, 1078
BciVI GTATCC 1 cut(s) 2188
BcoDI GTCTC 2 cut(s) 734, 1451
BcuI ACTAGT 2 cut(s) 64, 1474
BfaI CTAG 3 cut(s) 65, 1475, 1898
BfmI CTRYAG 5 cut(s) 343, 625, 1572, 1737, 1816
BfoI RGCGCY 1 cut(s) 1865
BfrI CTTAAG 2 cut(s) 1229, 1988
BfuI GTATCC 1 cut(s) 2188
BlpI GCTNAGC 1 cut(s) 1728
Bme1390I CCNGG 2 cut(s) 443, 1078
Bme18I GGWCC 2 cut(s) 715, 1930
BmeT110I CYCGRG 3 cut(s) 809, 1702, 2072
BmgT120I GGNCC 2 cut(s) 715, 1930
BmiI GGNNCC 6 cut(s) 891, 968, 1189, 1699, 1713, 2225
BmrFI CCNGG 2 cut(s) 443, 1078
BmsI GCATC 3 cut(s) 911, 1544, 2107
BoxI GACNNNNGTC 1 cut(s) 1463
BpiI GAAGAC 1 cut(s) 1227
BpmI CTGGAG 1 cut(s) 1605
Bpu10I CCTNAGC 1 cut(s) 1323
Bpu1102I GCTNAGC 1 cut(s) 1728
Bpu14I TTCGAA 1 cut(s) 1172
BpuEI CTTGAG 1 cut(s) 270
BsaBI GATNNNNATC 2 cut(s) 1340, 1668
BsaJI CCNNGG 4 cut(s) 297, 442, 711, 2102
BsaWI WCCGGW 1 cut(s) 892
BsaXI ACNNNNNCTCC 4 cut(s) 653, 683, 1962, 1992
Bsc4I CCNNNNNNNGG 5 cut(s) 82, 267, 432, 1798, 1927
Bse1I ACTGG 3 cut(s) 1792, 2169, 2240
Bse3DI GCAATG 2 cut(s) 127, 2070
Bse8I GATNNNNATC 2 cut(s) 1340, 1668
BseBI CCWGG 2 cut(s) 443, 1078
BseDI CCNNGG 4 cut(s) 297, 442, 711, 2102
BseGI GGATG 7 cut(s) 71, 1134, 1515, 1535, 1669, 2094, 2098
BseJI GATNNNNATC 2 cut(s) 1340, 1668
BseLI CCNNNNNNNGG 5 cut(s) 82, 267, 432, 1798, 1927
BseMI GCAATG 2 cut(s) 127, 2070
BseMII CTCAG 6 cut(s) 218, 393, 716, 1742, 1913, 2072
BseNI ACTGG 3 cut(s) 1792, 2169, 2240
BseRI GAGGAG 1 cut(s) 2147
BseSI GKGCMC 1 cut(s) 327
BseYI CCCAGC 2 cut(s) 326, 330
BsgI GTGCAG 1 cut(s) 850
BshFI GGCC 2 cut(s) 1050, 1205
BshNI GGYRCC 3 cut(s) 966, 1187, 1697
BsiHKAI GWGCWC 1 cut(s) 2073
BsiHKCI CYCGRG 3 cut(s) 809, 1702, 2072
BsiSI CCGG 2 cut(s) 893, 1880
BslFI GGGAC 3 cut(s) 347, 1451, 2091
BslI CCNNNNNNNGG 5 cut(s) 82, 267, 432, 1798, 1927
BsmAI GTCTC 2 cut(s) 734, 1451
BsmFI GGGAC 3 cut(s) 347, 1451, 2091
BsmI GAATGC 2 cut(s) 129, 887
BsnI GGCC 2 cut(s) 1050, 1205
BsoBI CYCGRG 3 cut(s) 809, 1702, 2072
Bsp119I TTCGAA 1 cut(s) 1172
Bsp1286I GDGCHC 3 cut(s) 327, 810, 2073
Bsp143I GATC 5 cut(s) 753, 889, 1363, 1720, 2229
Bsp1720I GCTNAGC 1 cut(s) 1728
Bsp19I CCATGG 2 cut(s) 297, 2102
BspANI GGCC 2 cut(s) 1050, 1205
BspCNI CTCAG 6 cut(s) 219, 392, 715, 1741, 1914, 2073
BspHI TCATGA 3 cut(s) 1110, 1962, 2179
BspLI GGNNCC 6 cut(s) 891, 968, 1189, 1699, 1713, 2225
BspMAI CTGCAG 2 cut(s) 629, 1576
BspPI GGATC 3 cut(s) 884, 897, 1371
BspT104I TTCGAA 1 cut(s) 1172
BspT107I GGYRCC 3 cut(s) 966, 1187, 1697
BspTI CTTAAG 2 cut(s) 1229, 1988
BsrDI GCAATG 2 cut(s) 127, 2070
BsrI ACTGG 3 cut(s) 1792, 2169, 2240
BssECI CCNNGG 4 cut(s) 297, 442, 711, 2102
BssMI GATC 5 cut(s) 753, 889, 1363, 1720, 2229
BssT1I CCWWGG 2 cut(s) 297, 2102
Bst2UI CCWGG 2 cut(s) 443, 1078
Bst4CI ACNGT 5 cut(s) 82, 1291, 1333, 1741, 1756
BstAFI CTTAAG 2 cut(s) 1229, 1988
BstAPI GCANNNNNTGC 2 cut(s) 40, 1580
BstBI TTCGAA 1 cut(s) 1172
BstC8I GCNNGC 1 cut(s) 955
BstDEI CTNAG 7 cut(s) 227, 379, 702, 1323, 1728, 1922, 2081
BstDSI CCRYGG 3 cut(s) 297, 711, 2102
BstENI CCTNNNNNAGG 1 cut(s) 1925
BstF5I GGATG 7 cut(s) 71, 1134, 1515, 1535, 1669, 2094, 2098
BstH2I RGCGCY 1 cut(s) 1865
BstHHI GCGC 1 cut(s) 1864
BstKTI GATC 5 cut(s) 756, 892, 1366, 1723, 2232
BstMAI GTCTC 2 cut(s) 734, 1451
BstMBI GATC 5 cut(s) 753, 889, 1363, 1720, 2229
BstMWI GCNNNNNNNGC 7 cut(s) 40, 126, 336, 345, 585, 825, 1580
BstNI CCWGG 2 cut(s) 443, 1078
BstNSI RCATGY 3 cut(s) 679, 747, 771
BstPAI GACNNNNGTC 1 cut(s) 1463
BstSCI CCNGG 2 cut(s) 441, 1076
BstSFI CTRYAG 5 cut(s) 343, 625, 1572, 1737, 1816
BstSLI GKGCMC 1 cut(s) 327
BstV2I GAAGAC 1 cut(s) 1227
BstX2I RGATCY 1 cut(s) 889
BstXI CCANNNNNNTGG 2 cut(s) 977, 1360
BstYI RGATCY 1 cut(s) 889
BsuI GTATCC 1 cut(s) 2188
BsuRI GGCC 2 cut(s) 1050, 1205
BtgI CCRYGG 3 cut(s) 297, 711, 2102
BtsCI GGATG 7 cut(s) 71, 1134, 1515, 1535, 1669, 2094, 2098
BtsI GCAGTG 1 cut(s) 492
BtsIMutI CAGTG 6 cut(s) 87, 492, 867, 1258, 1338, 1746
Cac8I GCNNGC 1 cut(s) 955
CaiI CAGNNNCTG 2 cut(s) 1077, 1580
CciI TCATGA 3 cut(s) 1110, 1962, 2179
CfoI GCGC 1 cut(s) 1864
Cfr13I GGNCC 2 cut(s) 715, 1930
Csp6I GTAC 7 cut(s) 447, 460, 967, 1084, 1287, 1397, 1500
CviQI GTAC 7 cut(s) 447, 460, 967, 1084, 1287, 1397, 1500
DdeI CTNAG 7 cut(s) 227, 379, 702, 1323, 1728, 1922, 2081
DpnI GATC 5 cut(s) 755, 891, 1365, 1722, 2231
DpnII GATC 5 cut(s) 753, 889, 1363, 1720, 2229
DrdI GACNNNNNNGTC 1 cut(s) 245
DseDI GACNNNNNNGTC 1 cut(s) 245
EaeI YGGCCR 1 cut(s) 1203
Ecl136II GAGCTC 1 cut(s) 2071
Eco130I CCWWGG 2 cut(s) 297, 2102
Eco24I GRGCYC 2 cut(s) 810, 2073
Eco47I GGWCC 2 cut(s) 715, 1930
Eco53kI GAGCTC 1 cut(s) 2071
Eco57I CTGAAG 1 cut(s) 1629
Eco88I CYCGRG 3 cut(s) 809, 1702, 2072
EcoICRI GAGCTC 1 cut(s) 2071
EcoNI CCTNNNNNAGG 1 cut(s) 1925
EcoRII CCWGG 2 cut(s) 441, 1076
EcoT14I CCWWGG 2 cut(s) 297, 2102
EcoT22I ATGCAT 3 cut(s) 769, 926, 2100
EcoT38I GRGCYC 2 cut(s) 810, 2073
ErhI CCWWGG 2 cut(s) 297, 2102
FalI AAGNNNNNCTT 4 cut(s) 647, 679, 1212, 1244
FaqI GGGAC 3 cut(s) 347, 1451, 2091
FblI GTMKAC 2 cut(s) 1092, 1293
FokI GGATG 7 cut(s) 58, 1121, 1502, 1522, 1676, 2085, 2101
FriOI GRGCYC 2 cut(s) 810, 2073
FspBI CTAG 3 cut(s) 65, 1475, 1898
GlaI GCGC 1 cut(s) 1863
GsaI CCCAGC 2 cut(s) 330, 334
GsuI CTGGAG 1 cut(s) 1605
HaeII RGCGCY 1 cut(s) 1865
HaeIII GGCC 2 cut(s) 1050, 1205
HapII CCGG 2 cut(s) 893, 1880
HhaI GCGC 1 cut(s) 1864
Hin6I GCGC 1 cut(s) 1862
HinP1I GCGC 1 cut(s) 1862
HincII GTYRAC 1 cut(s) 1797
HindII GTYRAC 1 cut(s) 1797
HindIII AAGCTT 2 cut(s) 1436, 1611
HinfI GANTC 5 cut(s) 847, 989, 1038, 1263, 2120
HpaII CCGG 2 cut(s) 893, 1880
HphI GGTGA 5 cut(s) 658, 1129, 1444, 1483, 2165
Hpy166II GTNNAC 5 cut(s) 462, 1093, 1294, 1647, 1797
Hpy188I TCNGA 8 cut(s) 146, 216, 228, 382, 673, 1609, 1690, 1720
Hpy188III TCNNGA 8 cut(s) 287, 799, 1111, 1345, 1456, 1704, 1963, 2180
Hpy8I GTNNAC 5 cut(s) 462, 1093, 1294, 1647, 1797
HpyCH4III ACNGT 5 cut(s) 82, 1291, 1333, 1741, 1756
HpyCH4IV ACGT 1 cut(s) 1977
HpyF10VI GCNNNNNNNGC 7 cut(s) 40, 126, 336, 345, 585, 825, 1580
HpyF3I CTNAG 7 cut(s) 227, 379, 702, 1323, 1728, 1922, 2081
HpySE526I ACGT 1 cut(s) 1977
HspAI GCGC 1 cut(s) 1862
KpnI GGTACC 1 cut(s) 970
Kzo9I GATC 5 cut(s) 753, 889, 1363, 1720, 2229
LmnI GCTCC 3 cut(s) 1079, 1970, 2068
LweI GCATC 3 cut(s) 911, 1544, 2107
MaeI CTAG 3 cut(s) 65, 1475, 1898
MaeII ACGT 1 cut(s) 1977
MaeIII GTNAC 5 cut(s) 161, 236, 247, 836, 1489
MalI GATC 5 cut(s) 755, 891, 1365, 1722, 2231
MboI GATC 5 cut(s) 753, 889, 1363, 1720, 2229
MboII GAAGA 3 cut(s) 1123, 1204, 1232
MfeI CAATTG 3 cut(s) 35, 729, 2144
MflI RGATCY 1 cut(s) 889
MhlI GDGCHC 3 cut(s) 327, 810, 2073
MlyI GAGTC 2 cut(s) 983, 1032
MmeI TCCRAC 3 cut(s) 696, 1015, 1563
Mph1103I ATGCAT 3 cut(s) 769, 926, 2100
MroXI GAANNNNTTC 2 cut(s) 368, 1130
MseI TTAA 8 cut(s) 689, 1064, 1157, 1230, 1389, 1562, 1989, 2109
MslI CAYNNNNRTG 7 cut(s) 296, 975, 1115, 1251, 1425, 1635, 2184
MspA1I CMGCKG 1 cut(s) 330
MspCI CTTAAG 2 cut(s) 1229, 1988
MspI CCGG 2 cut(s) 893, 1880
MspR9I CCNGG 2 cut(s) 443, 1078
MunI CAATTG 3 cut(s) 35, 729, 2144
Mva1269I GAATGC 2 cut(s) 129, 887
MvaI CCWGG 2 cut(s) 443, 1078
MwoI GCNNNNNNNGC 7 cut(s) 40, 126, 336, 345, 585, 825, 1580
NcoI CCATGG 2 cut(s) 297, 2102
NdeII GATC 5 cut(s) 753, 889, 1363, 1720, 2229
NlaIV GGNNCC 6 cut(s) 891, 968, 1189, 1699, 1713, 2225
NmuCI GTSAC 3 cut(s) 236, 247, 1489
NsiI ATGCAT 3 cut(s) 769, 926, 2100
NspI RCATGY 3 cut(s) 679, 747, 771
NspV TTCGAA 1 cut(s) 1172
PaeR7I CTCGAG 2 cut(s) 1702, 2072
PagI TCATGA 3 cut(s) 1110, 1962, 2179
PciI ACATGT 1 cut(s) 675
PcsI WCGNNNNNNNCGW 2 cut(s) 837, 1974
PctI GAATGC 2 cut(s) 129, 887
PdmI GAANNNNTTC 2 cut(s) 368, 1130
PfeI GAWTC 3 cut(s) 847, 1263, 2120
PflMI CCANNNNNTGG 1 cut(s) 82
PleI GAGTC 2 cut(s) 983, 1032
PpsI GAGTC 2 cut(s) 983, 1032
PscI ACATGT 1 cut(s) 675
PshAI GACNNNNGTC 1 cut(s) 1463
PshBI ATTAAT 2 cut(s) 1064, 1389
PsiI TTATAA 1 cut(s) 207
Psp124BI GAGCTC 1 cut(s) 2073
Psp1406I AACGTT 1 cut(s) 1977
Psp6I CCWGG 2 cut(s) 441, 1076
PspFI CCCAGC 2 cut(s) 326, 330
PspGI CCWGG 2 cut(s) 441, 1076
PspN4I GGNNCC 6 cut(s) 891, 968, 1189, 1699, 1713, 2225
PspPI GGNCC 2 cut(s) 715, 1930
PspXI VCTCGAGB 1 cut(s) 2072
PstI CTGCAG 2 cut(s) 629, 1576
PstNI CAGNNNCTG 2 cut(s) 1077, 1580
PsuI RGATCY 1 cut(s) 889
PvuII CAGCTG 1 cut(s) 330
RsaI GTAC 7 cut(s) 448, 461, 968, 1085, 1288, 1398, 1501
RsaNI GTAC 7 cut(s) 447, 460, 967, 1084, 1287, 1397, 1500
RseI CAYNNNNRTG 7 cut(s) 296, 975, 1115, 1251, 1425, 1635, 2184
SacI GAGCTC 1 cut(s) 2073
SaqAI TTAA 8 cut(s) 689, 1064, 1157, 1230, 1389, 1562, 1989, 2109
Sau3AI GATC 5 cut(s) 753, 889, 1363, 1720, 2229
Sau96I GGNCC 2 cut(s) 715, 1930
SchI GAGTC 2 cut(s) 983, 1032
ScrFI CCNGG 2 cut(s) 443, 1078
SduI GDGCHC 3 cut(s) 327, 810, 2073
SfaNI GCATC 3 cut(s) 911, 1544, 2107
SfcI CTRYAG 5 cut(s) 343, 625, 1572, 1737, 1816
Sfr274I CTCGAG 2 cut(s) 1702, 2072
SfuI TTCGAA 1 cut(s) 1172
SinI GGWCC 2 cut(s) 715, 1930
SlaI CTCGAG 2 cut(s) 1702, 2072
SmiMI CAYNNNNRTG 7 cut(s) 296, 975, 1115, 1251, 1425, 1635, 2184
SmlI CTYRAG 5 cut(s) 285, 1229, 1702, 1988, 2072
SmoI CTYRAG 5 cut(s) 285, 1229, 1702, 1988, 2072
SpeI ACTAGT 2 cut(s) 64, 1474
SspMI CTAG 3 cut(s) 65, 1475, 1898
SstI GAGCTC 1 cut(s) 2073
StyD4I CCNGG 2 cut(s) 441, 1076
StyI CCWWGG 2 cut(s) 297, 2102
TaaI ACNGT 5 cut(s) 82, 1291, 1333, 1741, 1756
TaiI ACGT 1 cut(s) 1980
TaqI TCGA 9 cut(s) 479, 720, 798, 1172, 1366, 1455, 1509, 1703, 2073
TaqII GACCGA 1 cut(s) 1947
TatI WGTACW 3 cut(s) 459, 1083, 1396
TfiI GAWTC 3 cut(s) 847, 1263, 2120
Tru1I TTAA 8 cut(s) 689, 1064, 1157, 1230, 1389, 1562, 1989, 2109
Tru9I TTAA 8 cut(s) 689, 1064, 1157, 1230, 1389, 1562, 1989, 2109
TscAI CASTG 6 cut(s) 87, 499, 874, 1258, 1338, 1746
TseFI GTSAC 3 cut(s) 236, 247, 1489
Tsp45I GTSAC 3 cut(s) 236, 247, 1489
TspGWI ACGGA 4 cut(s) 1232, 1704, 1814, 1983
TspRI CASTG 6 cut(s) 87, 499, 874, 1258, 1338, 1746
Van91I CCANNNNNTGG 1 cut(s) 82
Vha464I CTTAAG 2 cut(s) 1229, 1988
VpaK11BI GGWCC 2 cut(s) 715, 1930
VspI ATTAAT 2 cut(s) 1064, 1389
XagI CCTNNNNNAGG 1 cut(s) 1925
XapI RAATTY 3 cut(s) 395, 1016, 1554
XceI RCATGY 3 cut(s) 679, 747, 771
XcmI CCANNNNNNNNNTGG 2 cut(s) 113, 2056
XhoI CTCGAG 2 cut(s) 1702, 2072
XmiI GTMKAC 2 cut(s) 1092, 1293
XmnI GAANNNNTTC 2 cut(s) 368, 1130
XspI CTAG 3 cut(s) 65, 1475, 1898
Zsp2I ATGCAT 3 cut(s) 769, 926, 2100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.