Rh6AG344500

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0000066
Physical Location & Seq
Reverse (-)
54556843 .. 54557791
949 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG344500.1

Sequence Viewer

Length: 885 bp
ATGGGAATGCGTATGAGGGTTCATAGAGAAACTGCAATAGTGCCGCCGCGAGTGCATGGACACCAACTCTTTCGAGTACTTGTAGAAGTGATGATCATGATGAATATCACCATTTATGAAAACACATCACAAGCCAAAGCAGATGCATCATCCCCTAAACTCCGATCTAAGGGATGCTCAGACACTTGTGGGCCTCTTAGCATCCCTTTTCCTTTCGGCACATCCCCGGGTTGTTTCTTTGACGACAACTTTTTCGTCTCCTGTAATACTACTACAAATAAAGCATTTCTCCGAGGAAGAAATAATGATTTAGCTATCCTCCACATATCACTGGAGGATCACGAACTGCGTGTGTCTAGGCCCGTGACGAAAGCCTGCTTTGATGAGCAGGGAAATCCTCTCAAAAGGTGGATTACAGGGGAAGATGGGAGGGTAGAAACTCCCACGGTGACACCCTCTGACTACTTTTATATCTCAAGTACACGAAACAAGTTCACTACTGTTGGTTGCAATGCAAGCGCGATAATCGTGACCAGCACCCCTAGAGATTTGGGCAACAACAATGCAGATTTGGGATCGACATACCTGGACTCTTGTGCATCTTTGTGTCTTCCAGGAGTCAAGAAGGTGAAGAATGGAACTTGTGACCCCCTTGGTGGATGTTGCCAGAAATCTATCACTATTAAAGGCCTGACAAATTATGCGATTTCATATGGGAGTAGGAAGGAAGTAATTCGAAACAGAAATAGTTCAATATCAGCAATGATCTTCAACATGGCATACAAAACCGTGACGCTGTCCCTATGGTGCTCAATTGGGTTGTTGGGAATTACAATACATGTCAAGAGGCTCAGTCATCGTCGTCTACTCCCAGTAGTAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

294

Amino Acids

32.41

Weight (kDa)

9.32

Isoelectric Point (pI)

40.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 59 - 120 2.1e-10 Wall-associated receptor kinase galacturonan-binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 865
AccII CGCG 2 cut(s) 49, 521
AciI CCGC 2 cut(s) 44, 47
AclWI GGATC 2 cut(s) 345, 583
AfaI GTAC 2 cut(s) 78, 481
AfiI CCNNNNNNNGG 2 cut(s) 169, 656
AflIII ACRYGT 1 cut(s) 838
AgsI TTSAA 2 cut(s) 753, 772
AjnI CCWGG 2 cut(s) 585, 613
AluBI AGCT 1 cut(s) 314
AluI AGCT 1 cut(s) 314
Alw21I GWGCWC 1 cut(s) 812
Alw26I GTCTC 1 cut(s) 262
AlwI GGATC 2 cut(s) 345, 583
Ama87I CYCGRG 1 cut(s) 226
AoxI GGCC 3 cut(s) 191, 359, 688
ArsI GACNNNNNNTTYG 2 cut(s) 236, 268
Asp700I GAANNNNTTC 2 cut(s) 732, 748
AspLEI GCGC 1 cut(s) 521
AspS9I GGNCC 2 cut(s) 191, 360
AsuC2I CCSGG 2 cut(s) 227, 228
AsuHPI GGTGA 3 cut(s) 100, 460, 640
AsuII TTCGAA 1 cut(s) 736
AvaI CYCGRG 1 cut(s) 226
BbsI GAAGAC 1 cut(s) 602
Bbv12I GWGCWC 1 cut(s) 812
BccI CCATC 1 cut(s) 419
BciT130I CCWGG 2 cut(s) 587, 615
BclI TGATCA 1 cut(s) 93
BcnI CCSGG 2 cut(s) 227, 228
BcoDI GTCTC 1 cut(s) 262
BfaI CTAG 2 cut(s) 357, 543
BisI GCNGC 2 cut(s) 44, 47
BlsI GCNGC 2 cut(s) 45, 48
BmcAI AGTACT 1 cut(s) 78
Bme1390I CCNGG 4 cut(s) 227, 228, 587, 615
BmeT110I CYCGRG 1 cut(s) 226
BmgT120I GGNCC 2 cut(s) 191, 360
BmrFI CCNGG 4 cut(s) 227, 228, 587, 615
BmrI ACTGGG 1 cut(s) 866
BmsI GCATC 5 cut(s) 133, 155, 164, 210, 608
BmuI ACTGGG 1 cut(s) 866
BpiI GAAGAC 1 cut(s) 602
BpmI CTGGAG 1 cut(s) 353
Bpu14I TTCGAA 1 cut(s) 736
BpuEI CTTGAG 1 cut(s) 460
BpuMI CCSGG 2 cut(s) 227, 228
BsaBI GATNNNNATC 1 cut(s) 104
BsaJI CCNNGG 5 cut(s) 225, 226, 292, 444, 652
Bsc4I CCNNNNNNNGG 2 cut(s) 169, 656
Bse1I ACTGG 2 cut(s) 336, 872
Bse3DI GCAATG 2 cut(s) 517, 768
Bse8I GATNNNNATC 1 cut(s) 104
BseBI CCWGG 2 cut(s) 587, 615
BseDI CCNNGG 5 cut(s) 225, 226, 292, 444, 652
BseGI GGATG 5 cut(s) 149, 179, 201, 221, 665
BseJI GATNNNNATC 1 cut(s) 104
BseLI CCNNNNNNNGG 2 cut(s) 169, 656
BseMI GCAATG 2 cut(s) 517, 768
BseMII CTCAG 2 cut(s) 192, 865
BseNI ACTGG 2 cut(s) 336, 872
Bsh1236I CGCG 2 cut(s) 49, 521
BshFI GGCC 3 cut(s) 193, 361, 690
BsiHKAI GWGCWC 1 cut(s) 812
BsiHKCI CYCGRG 1 cut(s) 226
BsiSI CCGG 1 cut(s) 227
BslFI GGGAC 1 cut(s) 784
BslI CCNNNNNNNGG 2 cut(s) 169, 656
BsmAI GTCTC 1 cut(s) 262
BsmBI CGTCTC 1 cut(s) 262
BsmFI GGGAC 1 cut(s) 784
BsmI GAATGC 1 cut(s) 12
BsnI GGCC 3 cut(s) 193, 361, 690
BsoBI CYCGRG 1 cut(s) 226
Bsp119I TTCGAA 1 cut(s) 736
Bsp1286I GDGCHC 1 cut(s) 812
Bsp143I GATC 5 cut(s) 93, 164, 337, 575, 765
BspACI CCGC 2 cut(s) 44, 47
BspANI GGCC 3 cut(s) 193, 361, 690
BspCNI CTCAG 2 cut(s) 191, 864
BspFNI CGCG 2 cut(s) 49, 521
BspHI TCATGA 1 cut(s) 96
BspPI GGATC 2 cut(s) 345, 583
BspT104I TTCGAA 1 cut(s) 736
BsrDI GCAATG 2 cut(s) 517, 768
BsrI ACTGG 2 cut(s) 336, 872
BssECI CCNNGG 5 cut(s) 225, 226, 292, 444, 652
BssMI GATC 5 cut(s) 93, 164, 337, 575, 765
BssT1I CCWWGG 1 cut(s) 652
Bst2UI CCWGG 2 cut(s) 587, 615
Bst4CI ACNGT 3 cut(s) 448, 502, 790
BstBI TTCGAA 1 cut(s) 736
BstC8I GCNNGC 2 cut(s) 376, 517
BstDEI CTNAG 4 cut(s) 168, 178, 197, 851
BstDSI CCRYGG 1 cut(s) 444
BstF5I GGATG 5 cut(s) 149, 179, 201, 221, 665
BstFNI CGCG 2 cut(s) 49, 521
BstHHI GCGC 1 cut(s) 521
BstKTI GATC 5 cut(s) 96, 167, 340, 578, 768
BstMAI GTCTC 1 cut(s) 262
BstMBI GATC 5 cut(s) 93, 164, 337, 575, 765
BstMWI GCNNNNNNNGC 2 cut(s) 52, 516
BstNI CCWGG 2 cut(s) 587, 615
BstNSI RCATGY 1 cut(s) 842
BstSCI CCNGG 4 cut(s) 225, 226, 585, 613
BstUI CGCG 2 cut(s) 49, 521
BstV2I GAAGAC 1 cut(s) 602
BsuRI GGCC 3 cut(s) 193, 361, 690
BtgI CCRYGG 1 cut(s) 444
BtsCI GGATG 5 cut(s) 149, 179, 201, 221, 665
BtsIMutI CAGTG 1 cut(s) 329
Cac8I GCNNGC 2 cut(s) 376, 517
CciI TCATGA 1 cut(s) 96
CfoI GCGC 1 cut(s) 521
Cfr13I GGNCC 2 cut(s) 191, 360
Cfr9I CCCGGG 1 cut(s) 226
CseI GACGC 1 cut(s) 802
Csp6I GTAC 2 cut(s) 77, 480
CviAII CATG 4 cut(s) 56, 97, 775, 839
CviJI RGCY 7 cut(s) 134, 193, 314, 361, 374, 690, 850
CviKI_1 RGCY 7 cut(s) 134, 193, 314, 361, 374, 690, 850
CviQI GTAC 2 cut(s) 77, 480
DdeI CTNAG 4 cut(s) 168, 178, 197, 851
DpnI GATC 5 cut(s) 95, 166, 339, 577, 767
DpnII GATC 5 cut(s) 93, 164, 337, 575, 765
Eco130I CCWWGG 1 cut(s) 652
Eco147I AGGCCT 1 cut(s) 690
Eco88I CYCGRG 1 cut(s) 226
EcoRII CCWGG 2 cut(s) 585, 613
EcoT14I CCWWGG 1 cut(s) 652
EcoT22I ATGCAT 1 cut(s) 148
ErhI CCWWGG 1 cut(s) 652
Esp3I CGTCTC 1 cut(s) 262
FaeI CATG 4 cut(s) 59, 100, 778, 842
FaqI GGGAC 1 cut(s) 784
FatI CATG 4 cut(s) 55, 96, 774, 838
FauNDI CATATG 1 cut(s) 712
FbaI TGATCA 1 cut(s) 93
FblI GTMKAC 1 cut(s) 865
Fnu4HI GCNGC 2 cut(s) 44, 47
FokI GGATG 5 cut(s) 136, 186, 188, 208, 672
Fsp4HI GCNGC 2 cut(s) 44, 47
FspBI CTAG 2 cut(s) 357, 543
GlaI GCGC 1 cut(s) 520
GluI GCNGC 2 cut(s) 44, 47
GsuI CTGGAG 1 cut(s) 353
HaeIII GGCC 3 cut(s) 193, 361, 690
HapII CCGG 1 cut(s) 227
HgaI GACGC 1 cut(s) 802
HhaI GCGC 1 cut(s) 521
Hin1II CATG 4 cut(s) 59, 100, 778, 842
Hin6I GCGC 1 cut(s) 519
HinP1I GCGC 1 cut(s) 519
HinfI GANTC 2 cut(s) 590, 618
HpaII CCGG 1 cut(s) 227
HphI GGTGA 3 cut(s) 100, 460, 640
Hpy166II GTNNAC 3 cut(s) 482, 495, 866
Hpy188I TCNGA 4 cut(s) 164, 181, 293, 460
Hpy188III TCNNGA 5 cut(s) 97, 341, 529, 622, 844
Hpy8I GTNNAC 3 cut(s) 482, 495, 866
Hpy99I CGWCG 1 cut(s) 864
HpyAV CCTTC 2 cut(s) 619, 718
HpyCH4III ACNGT 3 cut(s) 448, 502, 790
HpyCH4V TGCA 7 cut(s) 35, 55, 146, 510, 515, 566, 599
HpyF10VI GCNNNNNNNGC 2 cut(s) 52, 516
HpyF3I CTNAG 4 cut(s) 168, 178, 197, 851
Hsp92II CATG 4 cut(s) 59, 100, 778, 842
HspAI GCGC 1 cut(s) 519
Ksp22I TGATCA 1 cut(s) 93
Kzo9I GATC 5 cut(s) 93, 164, 337, 575, 765
LweI GCATC 5 cut(s) 133, 155, 164, 210, 608
MaeI CTAG 2 cut(s) 357, 543
MaeIII GTNAC 6 cut(s) 364, 448, 529, 644, 790, 877
MalI GATC 5 cut(s) 95, 166, 339, 577, 767
MboI GATC 5 cut(s) 93, 164, 337, 575, 765
MboII GAAGA 5 cut(s) 309, 434, 602, 643, 760
MfeI CAATTG 1 cut(s) 813
MhlI GDGCHC 1 cut(s) 812
MluCI AATT 4 cut(s) 697, 732, 813, 828
MlyI GAGTC 2 cut(s) 584, 627
MnlI CCTC 9 cut(s) 9, 204, 287, 328, 329, 408, 423, 466, 840
Mph1103I ATGCAT 1 cut(s) 148
MroXI GAANNNNTTC 2 cut(s) 732, 748
MseI TTAA 1 cut(s) 684
MslI CAYNNNNRTG 1 cut(s) 604
MspI CCGG 1 cut(s) 227
MspR9I CCNGG 4 cut(s) 227, 228, 587, 615
MunI CAATTG 1 cut(s) 813
Mva1269I GAATGC 1 cut(s) 12
MvaI CCWGG 2 cut(s) 587, 615
MvnI CGCG 2 cut(s) 49, 521
MwoI GCNNNNNNNGC 2 cut(s) 52, 516
NciI CCSGG 2 cut(s) 227, 228
NdeI CATATG 1 cut(s) 712
NdeII GATC 5 cut(s) 93, 164, 337, 575, 765
NlaIII CATG 4 cut(s) 59, 100, 778, 842
NmuCI GTSAC 5 cut(s) 364, 448, 529, 644, 790
NsiI ATGCAT 1 cut(s) 148
NspI RCATGY 1 cut(s) 842
NspV TTCGAA 1 cut(s) 736
PagI TCATGA 1 cut(s) 96
PceI AGGCCT 1 cut(s) 690
PciI ACATGT 1 cut(s) 838
PctI GAATGC 1 cut(s) 12
PdmI GAANNNNTTC 2 cut(s) 732, 748
PflFI GACNNNGTC 1 cut(s) 796
PfoI TCCNGGA 1 cut(s) 613
PkrI GCNGC 2 cut(s) 45, 48
PleI GAGTC 2 cut(s) 584, 626
PpsI GAGTC 2 cut(s) 584, 626
PscI ACATGT 1 cut(s) 838
Psp6I CCWGG 2 cut(s) 585, 613
PspGI CCWGG 2 cut(s) 585, 613
PspPI GGNCC 2 cut(s) 191, 360
PsyI GACNNNGTC 1 cut(s) 796
RsaI GTAC 2 cut(s) 78, 481
RsaNI GTAC 2 cut(s) 77, 480
RseI CAYNNNNRTG 1 cut(s) 604
SaqAI TTAA 1 cut(s) 684
SatI GCNGC 2 cut(s) 44, 47
Sau3AI GATC 5 cut(s) 93, 164, 337, 575, 765
Sau96I GGNCC 2 cut(s) 191, 360
ScaI AGTACT 1 cut(s) 78
SchI GAGTC 2 cut(s) 584, 627
ScrFI CCNGG 4 cut(s) 227, 228, 587, 615
SduI GDGCHC 1 cut(s) 812
SetI ASST 4 cut(s) 316, 410, 588, 630
SfaNI GCATC 5 cut(s) 133, 155, 164, 210, 608
SfuI TTCGAA 1 cut(s) 736
SmaI CCCGGG 1 cut(s) 228
SmiMI CAYNNNNRTG 1 cut(s) 604
SmlI CTYRAG 1 cut(s) 475
SmoI CTYRAG 1 cut(s) 475
Sse9I AATT 4 cut(s) 697, 732, 813, 828
SseBI AGGCCT 1 cut(s) 690
SsiI CCGC 2 cut(s) 44, 47
SspMI CTAG 2 cut(s) 357, 543
StuI AGGCCT 1 cut(s) 690
StyD4I CCNGG 4 cut(s) 225, 226, 585, 613
StyI CCWWGG 1 cut(s) 652
TaaI ACNGT 3 cut(s) 448, 502, 790
TaqI TCGA 3 cut(s) 73, 578, 736
TasI AATT 4 cut(s) 697, 732, 813, 828
TatI WGTACW 2 cut(s) 76, 479
TauI GCSGC 2 cut(s) 46, 49
Tru1I TTAA 1 cut(s) 684
Tru9I TTAA 1 cut(s) 684
TscAI CASTG 1 cut(s) 336
TseFI GTSAC 5 cut(s) 364, 448, 529, 644, 790
Tsp45I GTSAC 5 cut(s) 364, 448, 529, 644, 790
TspDTI ATGAA 4 cut(s) 11, 116, 132, 699
TspMI CCCGGG 1 cut(s) 226
TspRI CASTG 1 cut(s) 336
Tth111I GACNNNGTC 1 cut(s) 796
XceI RCATGY 1 cut(s) 842
XmaI CCCGGG 1 cut(s) 226
XmiI GTMKAC 1 cut(s) 865
XmnI GAANNNNTTC 2 cut(s) 732, 748
XspI CTAG 2 cut(s) 357, 543
ZrmI AGTACT 1 cut(s) 78
Zsp2I ATGCAT 1 cut(s) 148
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.