RchiOBHm_Chr5g0016561

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000066
Physical Location & Seq
Reverse (-)
11377183 .. 11379977
2795 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ29693

Sequence Viewer

Length: 2109 bp
ATGCATGTCATGGCATCGCACACCATGCTTATTATGCAACTGATCTCTTTAGCAATAGTGGGAGTACTGGTTGTAACAATAACAACTGAAACAATCACATCAGCAGAAGCAGCAGCTCAGTCCTTGCCAGGATGCAAAACCCATTGTGGTAATCTGATGATTCCTTACCCATTTGGCATAGGTGACGGTTGTTACTTGCGACCAGAATTCAACATCACTTGTGACCATTCCACCACACCTCCATCAGCAAACTTCACGAATTATAGCATACGTATTGCTCACATATCCCTTGCTGAGGGTGAGTTGCGAATAATGCAAGACGTAGGTGTAGAATGTTATGACACCCAGGGTCGTGAGACGGACTATAACTGGCCTTCTCTCCAGTTGCCTCCTCCTTATACCATCTCTGATACCAAAAACAAGTTCTTTGACATTGGCTGTGGCAGTGTAGCTATTTTTCAAGGTGACCGCACGCACCCTGGGCCAGATGAAGATAAGTCCACAGCGGGGTACACCATGGTCTTATGTGATGATCTGCTTGGCAAAGTACTCACAAACTCTTGCAATGGCGTTGGCTGTTCCCAGTTTCCTATCCCAAGTGGATTGCACAACTTTACAATAATTCTGAGTCCAATTGCGGATAATACAGGTACATGGTTGACTAGGTATCCTTGTAGCTATTCTTTCATTGTGGAAGTAGCCATGTTCACATTCTCCCCCGATACAAGTTTTGATTTACTGAATACCACCAGCCAGCTTCCACTCATTGTTAATTGGGGGATTGGGGATGAACCATGTGATGAAAAGAGCCAGAATTATGCATGCAAGGCAGAAAATAGCAAGTGTGTCAACCAGTCCATCATTAATGGGCCGTCTGGTTACATATGCCAATGCTTACCAGGCTACGAAGGGAATCCATACCTCGAAGATGGGTGCCAAGGTGTAACTGTAGGCTTCTTGGTTTTTTTCATTGGAATTTCATGGACATCTTGGGGAATAAAGAAAAGAAACTTCATTAAGCTCAAAGAGAGGTACTTTAAGGAAAATGGTGGTTTGTTATTGCAAAAACAACTCTTTCATCATGGAGGCTCTGTGGAGACAACAAGAATTTTTACAGCAGAAGAACTTGAGAAGGCCACAAACAATTACCATGAAAGTAGAGTCCTTGGTGAAGGAGGATATGGAACCGTTTATAAAGGCATACTACTAGATAACAAAGTGGTTGCCATTAAAAAGTCTAAAATTGCTGCCCCGGCACAGAGTGATCAATTTGTTAATGAGGTGATTGTTCTTTCTCAAATCAATCACAGAAATATAGTCAGGCTATTAGGTTGTTGCTTAGAGACAGAAACACCTTTACTGATTTATGAGTTCATCACCAATGGCACTCTTTATGAGCACATTCATAAGAAAAGATCACTACTTTCTTTGGAATTACGAATGAAGATAGCAGCTGAAACTGCAGGAGCACTAGCATACCTACATTCCTCAACTTCCATGCCAATTATACATCGAGATGTGAAAGCAATGAATATACTATTAGATGATAACTATACAGCAAAAGTGGCAGACTTTGGAGCGTCACGATTGATTCCTTTAGGTCAAACTGAATTAGAAACTTTAGTACTAGGGACATTTGGTTACCTCGACCCTGAATATTTGCAATCAAACCAACTAACAGAAAAGAGTGACGTTTACAGCTTTGGAGTTGTCCTGCTGGAGCTAATAACTAGCAAAGTGGCACTTTGTACAAATAGATGCTTAGCAAGCATCTTCATCTCTGCCATGGAAGAAGGTTGGCTGGATCAAATTCTTGATGATAATATAGTGAATGATGGAAATATGGAGATGGTAAAACTTGTAGCCAATCTTGCAAAAAGATGTTTAAGTGTAAAAGGGCAGGAGAGGCCAACCATGAAAGAGGTAGCGATGGAGCTAGAAGGAATGAGAATGATGGCAAAGCATCCATGGAGAAAAAATGCTGATTTCTGTCCAGAAGAGAACGAGAGTTTGCTCAGTTCACTTGATGCAAACACTCACGTGGTGGATATTAGAGGTGATGGTGGTTCTGGGCTTCTGGCAGTACAAGTGTACAACTACCAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK hEGF

Protein Analysis

702

Amino Acids

77.55

Weight (kDa)

5.22

Isoelectric Point (pI)

30.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 45 - 105 2.3e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 383 - 642 1.3e-48 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 386 - 646 1.9e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1194
AccB1I GGYRCC 1 cut(s) 933
AciI CCGC 3 cut(s) 469, 506, 638
AclWI GGATC 1 cut(s) 1812
AcsI RAATTY 4 cut(s) 206, 975, 1107, 1809
AcvI CACGTG 1 cut(s) 2041
AdeI CACNNNGTG 2 cut(s) 1262, 2044
AfaI GTAC 9 cut(s) 66, 512, 549, 652, 1034, 1626, 1750, 2085, 2093
AfiI CCNNNNNNNGG 2 cut(s) 295, 507
AgsI TTSAA 2 cut(s) 211, 461
AjnI CCWGG 5 cut(s) 127, 345, 478, 898, 2100
AjuI GAANNNNNNNTTGG 2 cut(s) 407, 439
AleI CACNNNNGTG 1 cut(s) 2039
AluBI AGCT 9 cut(s) 116, 452, 678, 757, 1021, 1454, 1701, 1723, 1936
AluI AGCT 9 cut(s) 116, 452, 678, 757, 1021, 1454, 1701, 1723, 1936
Alw21I GWGCWC 2 cut(s) 1401, 1471
Alw26I GTCTC 3 cut(s) 350, 1091, 1337
AlwI GGATC 1 cut(s) 1812
AoxI GGCC 5 cut(s) 371, 482, 869, 1134, 1907
ApeKI GCWGC 4 cut(s) 110, 113, 1247, 1451
ApoI RAATTY 4 cut(s) 206, 975, 1107, 1809
AseI ATTAAT 1 cut(s) 864
AspS9I GGNCC 2 cut(s) 482, 869
AsuC2I CCSGG 1 cut(s) 1253
AsuHPI GGTGA 7 cut(s) 194, 311, 476, 1181, 1294, 1369, 2069
BanI GGYRCC 1 cut(s) 933
BbrPI CACGTG 1 cut(s) 2041
Bbv12I GWGCWC 2 cut(s) 1401, 1471
BbvCI CCTCAGC 1 cut(s) 294
BbvI GCAGC 4 cut(s) 122, 125, 1234, 1463
BccI CCATC 9 cut(s) 250, 410, 866, 923, 1829, 1843, 1924, 1948, 2054
BceAI ACGGC 1 cut(s) 856
BciT130I CCWGG 5 cut(s) 129, 347, 480, 900, 2102
BciVI GTATCC 1 cut(s) 678
BclI TGATCA 1 cut(s) 1264
BcnI CCSGG 1 cut(s) 1253
BcoDI GTCTC 3 cut(s) 350, 1091, 1337
BfaI CTAG 6 cut(s) 663, 1208, 1472, 1628, 1731, 1937
BfmI CTRYAG 2 cut(s) 948, 1461
BfuI GTATCC 1 cut(s) 678
BisI GCNGC 4 cut(s) 111, 114, 1248, 1452
BlpI GCTNAGC 1 cut(s) 1762
BlsI GCNGC 4 cut(s) 112, 115, 1249, 1453
BmcAI AGTACT 3 cut(s) 66, 549, 1626
Bme1390I CCNGG 6 cut(s) 129, 347, 480, 900, 1253, 2102
BmgT120I GGNCC 2 cut(s) 482, 869
BmiI GGNNCC 2 cut(s) 935, 1186
BmrFI CCNGG 6 cut(s) 129, 347, 480, 900, 1253, 2102
BmrI ACTGGG 1 cut(s) 577
BmsI GCATC 6 cut(s) 23, 122, 1748, 1779, 1972, 2017
BmuI ACTGGG 1 cut(s) 577
BpmI CTGGAG 2 cut(s) 365, 1739
Bpu10I CCTNAGC 1 cut(s) 294
Bpu1102I GCTNAGC 1 cut(s) 1762
BpuEI CTTGAG 1 cut(s) 1148
BpuMI CCSGG 1 cut(s) 1253
BsaAI YACGTR 2 cut(s) 272, 2041
BsaXI ACNNNNNCTCC 6 cut(s) 54, 84, 223, 253, 1077, 1107
Bsc4I CCNNNNNNNGG 2 cut(s) 295, 507
Bse1I ACTGG 5 cut(s) 72, 374, 382, 583, 853
Bse3DI GCAATG 2 cut(s) 571, 1533
BseBI CCWGG 5 cut(s) 129, 347, 480, 900, 2102
BseGI GGATG 3 cut(s) 137, 793, 1963
BseLI CCNNNNNNNGG 2 cut(s) 295, 507
BseMI GCAATG 2 cut(s) 571, 1533
BseMII CTCAG 4 cut(s) 131, 285, 617, 2029
BseNI ACTGG 5 cut(s) 72, 374, 382, 583, 853
BseRI GAGGAG 1 cut(s) 381
BseXI GCAGC 4 cut(s) 122, 125, 1234, 1463
BshFI GGCC 5 cut(s) 373, 484, 871, 1136, 1909
BshNI GGYRCC 1 cut(s) 933
BsiHKAI GWGCWC 2 cut(s) 1401, 1471
BsiSI CCGG 1 cut(s) 1253
BslFI GGGAC 1 cut(s) 1645
BslI CCNNNNNNNGG 2 cut(s) 295, 507
BsmAI GTCTC 3 cut(s) 350, 1091, 1337
BsmBI CGTCTC 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 1645
BsnI GGCC 5 cut(s) 373, 484, 871, 1136, 1909
Bsp1286I GDGCHC 2 cut(s) 1401, 1471
Bsp1407I TGTACA 2 cut(s) 1748, 2091
Bsp143I GATC 5 cut(s) 42, 532, 1264, 1415, 1804
Bsp1720I GCTNAGC 1 cut(s) 1762
Bsp19I CCATGG 3 cut(s) 516, 1785, 1967
BspACI CCGC 3 cut(s) 469, 506, 638
BspANI GGCC 5 cut(s) 373, 484, 871, 1136, 1909
BspCNI CTCAG 4 cut(s) 130, 286, 618, 2028
BspLI GGNNCC 2 cut(s) 935, 1186
BspMAI CTGCAG 1 cut(s) 1465
BspPI GGATC 1 cut(s) 1812
BspT107I GGYRCC 1 cut(s) 933
BsrDI GCAATG 2 cut(s) 571, 1533
BsrGI TGTACA 2 cut(s) 1748, 2091
BsrI ACTGG 5 cut(s) 72, 374, 382, 583, 853
BssMI GATC 5 cut(s) 42, 532, 1264, 1415, 1804
BssT1I CCWWGG 5 cut(s) 516, 937, 1165, 1785, 1967
Bst2UI CCWGG 5 cut(s) 129, 347, 480, 900, 2102
Bst4CI ACNGT 3 cut(s) 188, 949, 1189
Bst6I CTCTTC 1 cut(s) 1992
BstAPI GCANNNNNTGC 1 cut(s) 25
BstAUI TGTACA 2 cut(s) 1748, 2091
BstBAI YACGTR 2 cut(s) 272, 2041
BstC8I GCNNGC 4 cut(s) 473, 755, 823, 1768
BstDEI CTNAG 6 cut(s) 117, 294, 626, 1339, 1762, 2015
BstDSI CCRYGG 3 cut(s) 516, 1785, 1967
BstEII GGTNACC 2 cut(s) 464, 1640
BstENI CCTNNNNNAGG 1 cut(s) 293
BstF5I GGATG 3 cut(s) 137, 793, 1963
BstKTI GATC 5 cut(s) 45, 535, 1267, 1418, 1807
BstMAI GTCTC 3 cut(s) 350, 1091, 1337
BstMBI GATC 5 cut(s) 42, 532, 1264, 1415, 1804
BstNI CCWGG 5 cut(s) 129, 347, 480, 900, 2102
BstNSI RCATGY 2 cut(s) 8, 825
BstPI GGTNACC 2 cut(s) 464, 1640
BstSCI CCNGG 6 cut(s) 127, 345, 478, 898, 1251, 2100
BstSFI CTRYAG 2 cut(s) 948, 1461
BstSNI TACGTA 1 cut(s) 272
BstV1I GCAGC 4 cut(s) 122, 125, 1234, 1463
BsuI GTATCC 1 cut(s) 678
BsuRI GGCC 5 cut(s) 373, 484, 871, 1136, 1909
BtgI CCRYGG 3 cut(s) 516, 1785, 1967
BtgZI GCGATG 1 cut(s) 1943
BtsCI GGATG 3 cut(s) 137, 793, 1963
BtsI GCAGTG 1 cut(s) 451
BtsIMutI CAGTG 1 cut(s) 451
Cac8I GCNNGC 4 cut(s) 473, 755, 823, 1768
Cfr13I GGNCC 2 cut(s) 482, 869
CseI GACGC 1 cut(s) 1569
CsiI ACCWGGT 1 cut(s) 2100
Csp6I GTAC 9 cut(s) 65, 511, 548, 651, 1033, 1625, 1749, 2084, 2092
CviQI GTAC 9 cut(s) 65, 511, 548, 651, 1033, 1625, 1749, 2084, 2092
DdeI CTNAG 6 cut(s) 117, 294, 626, 1339, 1762, 2015
DpnI GATC 5 cut(s) 44, 534, 1266, 1417, 1806
DpnII GATC 5 cut(s) 42, 532, 1264, 1415, 1804
DraIII CACNNNGTG 2 cut(s) 1262, 2044
Eam1104I CTCTTC 1 cut(s) 1992
EarI CTCTTC 1 cut(s) 1992
Eco105I TACGTA 1 cut(s) 272
Eco130I CCWWGG 5 cut(s) 516, 937, 1165, 1785, 1967
Eco72I CACGTG 1 cut(s) 2041
Eco91I GGTNACC 2 cut(s) 464, 1640
EcoNI CCTNNNNNAGG 1 cut(s) 293
EcoO65I GGTNACC 2 cut(s) 464, 1640
EcoRI GAATTC 1 cut(s) 206
EcoRII CCWGG 5 cut(s) 127, 345, 478, 898, 2100
EcoT14I CCWWGG 5 cut(s) 516, 937, 1165, 1785, 1967
EcoT22I ATGCAT 2 cut(s) 6, 823
ErhI CCWWGG 5 cut(s) 516, 937, 1165, 1785, 1967
Esp3I CGTCTC 1 cut(s) 350
FalI AAGNNNNNCTT 2 cut(s) 1728, 1760
FaqI GGGAC 1 cut(s) 1645
FauI CCCGC 1 cut(s) 499
FauNDI CATATG 1 cut(s) 884
FbaI TGATCA 1 cut(s) 1264
Fnu4HI GCNGC 4 cut(s) 111, 114, 1248, 1452
FokI GGATG 3 cut(s) 144, 800, 1950
Fsp4HI GCNGC 4 cut(s) 111, 114, 1248, 1452
FspBI CTAG 6 cut(s) 663, 1208, 1472, 1628, 1731, 1937
GluI GCNGC 4 cut(s) 111, 114, 1248, 1452
GsuI CTGGAG 2 cut(s) 365, 1739
HaeIII GGCC 5 cut(s) 373, 484, 871, 1136, 1909
HapII CCGG 1 cut(s) 1253
HgaI GACGC 1 cut(s) 1569
HincII GTYRAC 2 cut(s) 660, 850
HindII GTYRAC 2 cut(s) 660, 850
HinfI GANTC 5 cut(s) 160, 628, 913, 1161, 1591
HpaII CCGG 1 cut(s) 1253
HphI GGTGA 7 cut(s) 194, 311, 476, 1181, 1294, 1369, 2069
Hpy166II GTNNAC 8 cut(s) 501, 513, 660, 708, 850, 1696, 2021, 2092
Hpy188I TCNGA 3 cut(s) 156, 409, 627
Hpy188III TCNNGA 6 cut(s) 256, 353, 1514, 1584, 1814, 1994
Hpy8I GTNNAC 8 cut(s) 501, 513, 660, 708, 850, 1696, 2021, 2092
HpyAV CCTTC 6 cut(s) 384, 902, 1126, 1166, 1787, 1934
HpyCH4III ACNGT 3 cut(s) 188, 949, 1189
HpyCH4IV ACGT 4 cut(s) 271, 321, 1692, 2040
HpyF3I CTNAG 6 cut(s) 117, 294, 626, 1339, 1762, 2015
HpySE526I ACGT 4 cut(s) 271, 321, 1692, 2040
Ksp22I TGATCA 1 cut(s) 1264
Kzo9I GATC 5 cut(s) 42, 532, 1264, 1415, 1804
LmnI GCTCC 4 cut(s) 1466, 1577, 1720, 1933
Lsp1109I GCAGC 4 cut(s) 122, 125, 1234, 1463
LweI GCATC 6 cut(s) 23, 122, 1748, 1779, 1972, 2017
MabI ACCWGGT 1 cut(s) 2100
MaeI CTAG 6 cut(s) 663, 1208, 1472, 1628, 1731, 1937
MaeII ACGT 4 cut(s) 271, 321, 1692, 2040
MalI GATC 5 cut(s) 44, 534, 1266, 1417, 1806
MboI GATC 5 cut(s) 42, 532, 1264, 1415, 1804
MboII GAAGA 7 cut(s) 503, 938, 1133, 1456, 1765, 1802, 2009
MfeI CAATTG 1 cut(s) 633
MhlI GDGCHC 2 cut(s) 1401, 1471
MlyI GAGTC 2 cut(s) 637, 1170
Mph1103I ATGCAT 2 cut(s) 6, 823
MseI TTAA 7 cut(s) 771, 864, 1017, 1038, 1230, 1275, 1886
MslI CAYNNNNRTG 2 cut(s) 1515, 2039
MspA1I CMGCKG 2 cut(s) 506, 1454
MspI CCGG 1 cut(s) 1253
MspR9I CCNGG 6 cut(s) 129, 347, 480, 900, 1253, 2102
MunI CAATTG 1 cut(s) 633
MvaI CCWGG 5 cut(s) 129, 347, 480, 900, 2102
NciI CCSGG 1 cut(s) 1253
NcoI CCATGG 3 cut(s) 516, 1785, 1967
NdeI CATATG 1 cut(s) 884
NdeII GATC 5 cut(s) 42, 532, 1264, 1415, 1804
NlaIV GGNNCC 2 cut(s) 935, 1186
NmuCI GTSAC 5 cut(s) 182, 221, 464, 1581, 1688
NsiI ATGCAT 2 cut(s) 6, 823
NspI RCATGY 2 cut(s) 8, 825
OliI CACNNNNGTG 1 cut(s) 2039
PaeI GCATGC 1 cut(s) 825
PasI CCCWGGG 2 cut(s) 346, 479
PfeI GAWTC 3 cut(s) 160, 913, 1591
PkrI GCNGC 4 cut(s) 112, 115, 1249, 1453
PleI GAGTC 2 cut(s) 636, 1169
PmaCI CACGTG 1 cut(s) 2041
PmlI CACGTG 1 cut(s) 2041
PpsI GAGTC 2 cut(s) 636, 1169
Ppu21I YACGTR 2 cut(s) 272, 2041
PshBI ATTAAT 1 cut(s) 864
PsiI TTATAA 1 cut(s) 1194
Psp6I CCWGG 5 cut(s) 127, 345, 478, 898, 2100
PspCI CACGTG 1 cut(s) 2041
PspEI GGTNACC 2 cut(s) 464, 1640
PspGI CCWGG 5 cut(s) 127, 345, 478, 898, 2100
PspN4I GGNNCC 2 cut(s) 935, 1186
PspPI GGNCC 2 cut(s) 482, 869
PstI CTGCAG 1 cut(s) 1465
PvuII CAGCTG 1 cut(s) 1454
RsaI GTAC 9 cut(s) 66, 512, 549, 652, 1034, 1626, 1750, 2085, 2093
RsaNI GTAC 9 cut(s) 65, 511, 548, 651, 1033, 1625, 1749, 2084, 2092
RseI CAYNNNNRTG 2 cut(s) 1515, 2039
SaqAI TTAA 7 cut(s) 771, 864, 1017, 1038, 1230, 1275, 1886
SatI GCNGC 4 cut(s) 111, 114, 1248, 1452
Sau3AI GATC 5 cut(s) 42, 532, 1264, 1415, 1804
Sau96I GGNCC 2 cut(s) 482, 869
ScaI AGTACT 3 cut(s) 66, 549, 1626
SchI GAGTC 2 cut(s) 637, 1170
ScrFI CCNGG 6 cut(s) 129, 347, 480, 900, 1253, 2102
SduI GDGCHC 2 cut(s) 1401, 1471
SexAI ACCWGGT 1 cut(s) 2100
SfaNI GCATC 6 cut(s) 23, 122, 1748, 1779, 1972, 2017
SfcI CTRYAG 2 cut(s) 948, 1461
SmiMI CAYNNNNRTG 2 cut(s) 1515, 2039
SmlI CTYRAG 1 cut(s) 1127
SmoI CTYRAG 1 cut(s) 1127
SnaBI TACGTA 1 cut(s) 272
SphI GCATGC 1 cut(s) 825
SsiI CCGC 3 cut(s) 469, 506, 638
SspI AATATT 1 cut(s) 1658
SspMI CTAG 6 cut(s) 663, 1208, 1472, 1628, 1731, 1937
StyD4I CCNGG 6 cut(s) 127, 345, 478, 898, 1251, 2100
StyI CCWWGG 5 cut(s) 516, 937, 1165, 1785, 1967
TaaI ACNGT 3 cut(s) 188, 949, 1189
TaiI ACGT 4 cut(s) 274, 324, 1695, 2043
TaqI TCGA 3 cut(s) 924, 1513, 1647
TatI WGTACW 6 cut(s) 64, 547, 1624, 1748, 2083, 2091
TfiI GAWTC 3 cut(s) 160, 913, 1591
Tru1I TTAA 7 cut(s) 771, 864, 1017, 1038, 1230, 1275, 1886
Tru9I TTAA 7 cut(s) 771, 864, 1017, 1038, 1230, 1275, 1886
TscAI CASTG 1 cut(s) 451
TseFI GTSAC 5 cut(s) 182, 221, 464, 1581, 1688
TseI GCWGC 4 cut(s) 110, 113, 1247, 1451
Tsp45I GTSAC 5 cut(s) 182, 221, 464, 1581, 1688
TspGWI ACGGA 1 cut(s) 374
TspRI CASTG 1 cut(s) 451
VspI ATTAAT 1 cut(s) 864
XagI CCTNNNNNAGG 1 cut(s) 293
XapI RAATTY 4 cut(s) 206, 975, 1107, 1809
XceI RCATGY 2 cut(s) 8, 825
XspI CTAG 6 cut(s) 663, 1208, 1472, 1628, 1731, 1937
ZrmI AGTACT 3 cut(s) 66, 549, 1626
Zsp2I ATGCAT 2 cut(s) 6, 823
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.