Prupe.4G093200_v2.0.a1

specification of plant organ axis polarity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000066
Physical Location & Seq
Reverse (-)
4697706 .. 4700501
2796 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G093200.1

Sequence Viewer

Length: 2259 bp
ATGGTGGAATTGGTTGTGATATTACTATTAGCAACTCCAATTGCAACAGCAGCTCAAGCCCTGCCTGGCTGCCAAGATCATTGTGGCAATCTCACAATCCCATATCCATTTGGCATAGGCCCTGGCTGCTACCTCCAACCCGAATTCAACATCACTTGCAACCAATCCACCCAGCCCCCAACAGCAAATTTGAAGACAAGCAATATCAAAATCACCAACATATCCCTTGAAGAGGGCGAGCTCCAAATTCTGCAATATGTAGCCGAAGACTGTTACAACGCTCAGGGAAACCGGACCAGCGGAATCGTCCCCAGGCTGCAGGTGTCTCCTCCCTACACCATCTCCCATACCAAGAACAAGTTCTACGCCCTTGGCTGCGACACGTTAGCGTATTTTACTGGCTACCGGGGCAACCAACGGTACACGACGGGGTGCATGTCCATATGTGATAGTCTAGATATGGCTGTTGACGAGCAGGATACTTGCTCCGGCGTAGGCTGTTGCCAAGTGTCCATCCCTAGCGGACTGAAAAATCAGACTGTCATGTTGACAAGCCCTACAAATCGCACGGGCATATGGGACTCTAACCCTTGCAGCTACGCGTTTATTGTGCAAGCTGACCGCTTCGAATTCAGTCGTACGAGTTTGCAACTGATGAACAACAAAAGTTTGCTTCCGGCGGTTCTTAATTGGGAAATTGGGAATCAGTCATGTGACACAGCTAAAAAGAGCGAAGGTTTTGCATGCAAGGGAAATAGCAACTGTACTACTGTTGGGTCGGCAGGTTACATTTGCAAGTGCATGCCAGGTTACCAAGGGAATCCATACCACCCAGATGGTTGCCAAGATACTGATGAGTGCAAGGATTCAAACCCCTGCCCTATCGGAACGTGCATAAATTTACTGGGAAATTATTCTTGTAAATGTCCCGAAGGGTACAAAAATGACGTCATGGATGAAAAGAAATGCATCAAAGACAACAATAGTTCAAAGATCATTCTCCCGCTCGTTATTTCATTGGGTGCCAGTGGAGGCTTCTTGCTTTTACTGGTTGGAAGTTTATGGATATATTGGGGTATGCAGAGAAGAAAGTTCATCAAACTCAAAGAGAAATACTTCAAAGAAAATGGCGGCTTATTATTACAACAACAACTCGCTAGTCAAGGAGGCTCTATGGAAACAACAAAACTCTTTACAGCAGAAGAACTTGAGAAGGCCACGAACAATTACCACGAAAGTAGAATCCTTGGTGAAGGAGGCTATGGAACGGTTTACAAAGGAATATTACCAGATAACAGCGTGGTTGCCATAAAGAAGTCAAAAGTTAATGGTGCGCCAGCTCAGAGTGACGTTTTTATTAATGAGGTGATTGTTCTTTCTCAAATCAAGCACAGAAATGTGGTGAGGTTATTAGGTTGTTGTTTAGAGACACCGGCGCCATTACTGGTTTACGAGTTCATTGTTGAGGGCACTCTTTCTGAGCACATCCATAAAAAAATTGACAAAAGATCATCACTTTCGTGGGAGCTGCGATTGAATATAGCGACAGAAACAGCAGGAGCACTAGCATACTTACACTCCTCTGCTCTTATGCAAATTATCCACCGAGATGTGAAAGCAACAAACATATTATTAGATGAACATTACACGGCAAAAGTGTCCGACTTTGGAGCTTCAAGATTGATCCCTCTAGATCAAACTCAACTAACAACGTTAGTGCAAGGAACACTTGGATACTTAGACCCCGAATACTTCCTTACGAATCAACTGACGGAAAAGAGTGACGTTTATAGCTTCGGAGTTGTCCTTATGGAGCTATTGACAAGCAAAGTGGCACTTTCTTTCGCCAGGCCCGAGGAAGACATAAACCTAGCCAACTTCTTTGTTCGTTTCATGGAGGAAGATCGCTTGAATGAGGTTCTTGATGATGACATAGTCAACGAGAGAAACGTTGAGACACTAAAAAAGGTGGCAGAAGTCGCAAAAAGATGTGTGAGGTTAAAAGGGCAGGACAGGCCTAGCATGAAAGAAGTGGCAATGGAGCTAGAGGGAATGAGAGTTACACCAAAGCAACCATGGGGAAAATCTGAAGTTTCAAGTCCAGAAGACACTGAGTACTTACTTGGTTCAGCTATGAATTCAGACGCTTATTTTGTGGATGTTAGAGGTGATTTTGGTTCTAGAGGTGCAACTATTGGTACAACCAGTGGGTACGATAGCATGCAAATCCAAATGGTAATGCCATATGATGGGCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase_Tyr

Protein Analysis

753

Amino Acids

82.96

Weight (kDa)

5.41

Isoelectric Point (pI)

36.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 310
AatII GACGTC 1 cut(s) 951
Acc36I ACCTGC 2 cut(s) 310, 773
AccB1I GGYRCC 2 cut(s) 1022, 1435
AccB7I CCANNNNNTGG 1 cut(s) 2249
AccBSI CCGCTC 1 cut(s) 1006
AccII CGCG 1 cut(s) 602
AciI CCGC 6 cut(s) 300, 522, 622, 680, 1004, 1131
AclI AACGTT 2 cut(s) 1712, 1950
AclWI GGATC 1 cut(s) 1678
AcsI RAATTY 6 cut(s) 143, 187, 246, 629, 898, 2137
AcuI CTGAAG 1 cut(s) 2109
AcyI GRCGYC 2 cut(s) 948, 1436
AfaI GTAC 7 cut(s) 422, 640, 766, 938, 2117, 2200, 2213
AfiI CCNNNNNNNGG 2 cut(s) 232, 2249
AflIII ACRYGT 2 cut(s) 381, 600
AjnI CCWGG 5 cut(s) 64, 121, 311, 805, 1847
AjuI GAANNNNNNNTTGG 2 cut(s) 344, 376
AleI CACNNNNGTG 1 cut(s) 1519
Alw21I GWGCWC 3 cut(s) 243, 1485, 1564
Alw26I GTCTC 3 cut(s) 330, 1421, 1949
AlwI GGATC 1 cut(s) 1678
Ama87I CYCGRG 1 cut(s) 1853
AoxI GGCC 4 cut(s) 118, 1215, 1850, 2015
ApeKI GCWGC 7 cut(s) 50, 69, 126, 316, 375, 594, 1528
ApoI RAATTY 6 cut(s) 143, 187, 246, 629, 898, 2137
ArsI GACNNNNNNTTYG 4 cut(s) 933, 965, 2135, 2167
AseI ATTAAT 1 cut(s) 1359
Asp700I GAANNNNTTC 3 cut(s) 359, 913, 1115
AspLEI GCGC 2 cut(s) 1336, 1438
AspS9I GGNCC 3 cut(s) 119, 294, 1851
AsuC2I CCSGG 1 cut(s) 407
AsuHPI GGTGA 5 cut(s) 205, 1262, 1378, 1414, 2180
AsuII TTCGAA 1 cut(s) 627
AvaI CYCGRG 1 cut(s) 1853
AvaII GGWCC 1 cut(s) 294
BaeGI GKGCMC 1 cut(s) 1472
BanI GGYRCC 2 cut(s) 1022, 1435
BanII GRGCYC 1 cut(s) 243
BbsI GAAGAC 4 cut(s) 200, 273, 1866, 2112
Bbv12I GWGCWC 3 cut(s) 243, 1485, 1564
BbvI GCAGC 7 cut(s) 56, 62, 113, 303, 362, 606, 1515
BccI CCATC 4 cut(s) 347, 521, 830, 2243
BceAI ACGGC 1 cut(s) 1665
BcgI CGANNNNNNTGC 2 cut(s) 722, 756
BciT130I CCWGG 5 cut(s) 66, 123, 313, 807, 1849
BciVI GTATCC 2 cut(s) 472, 1727
BcnI CCSGG 1 cut(s) 407
BcoDI GTCTC 3 cut(s) 330, 1421, 1949
BfaI CTAG 9 cut(s) 455, 519, 1158, 1565, 1691, 1871, 2019, 2045, 2181
BfmI CTRYAG 1 cut(s) 317
BfoI RGCGCY 1 cut(s) 1439
BfuAI ACCTGC 2 cut(s) 310, 773
BfuI GTATCC 2 cut(s) 472, 1727
BisI GCNGC 8 cut(s) 51, 70, 127, 317, 376, 595, 1132, 1529
BlsI GCNGC 8 cut(s) 52, 71, 128, 318, 377, 596, 1133, 1530
BmcAI AGTACT 1 cut(s) 2117
Bme1390I CCNGG 6 cut(s) 66, 123, 313, 407, 807, 1849
Bme18I GGWCC 1 cut(s) 294
BmeT110I CYCGRG 1 cut(s) 1853
BmgT120I GGNCC 3 cut(s) 119, 294, 1851
BmiI GGNNCC 2 cut(s) 1024, 1437
BmrFI CCNGG 6 cut(s) 66, 123, 313, 407, 807, 1849
BmrI ACTGGG 1 cut(s) 914
BmsI GCATC 1 cut(s) 978
BmuI ACTGGG 1 cut(s) 914
BpiI GAAGAC 4 cut(s) 200, 273, 1866, 2112
Bpu10I CCTNAGC 1 cut(s) 282
Bpu14I TTCGAA 1 cut(s) 627
BpuEI CTTGAG 2 cut(s) 39, 1229
BpuMI CCSGG 1 cut(s) 407
BsaHI GRCGYC 2 cut(s) 948, 1436
BsaJI CCNNGG 8 cut(s) 121, 311, 370, 406, 814, 1246, 1854, 2075
BsaWI WCCGGW 1 cut(s) 291
BsaXI ACNNNNNCTCC 4 cut(s) 326, 356, 1562, 1592
Bsc4I CCNNNNNNNGG 2 cut(s) 232, 2249
Bse118I RCCGGY 1 cut(s) 1432
Bse1I ACTGG 6 cut(s) 403, 909, 1026, 1053, 1449, 2205
Bse3DI GCAATG 1 cut(s) 2043
BseBI CCWGG 5 cut(s) 66, 123, 313, 807, 1849
BseDI CCNNGG 8 cut(s) 121, 311, 370, 406, 814, 1246, 1854, 2075
BseGI GGATG 4 cut(s) 513, 961, 1485, 2164
BseLI CCNNNNNNNGG 2 cut(s) 232, 2249
BseMI GCAATG 1 cut(s) 2043
BseMII CTCAG 4 cut(s) 296, 1355, 1470, 2103
BseNI ACTGG 6 cut(s) 403, 909, 1026, 1053, 1449, 2205
BseRI GAGGAG 2 cut(s) 318, 1570
BseSI GKGCMC 1 cut(s) 1472
BseXI GCAGC 7 cut(s) 56, 62, 113, 303, 362, 606, 1515
BseYI CCCAGC 1 cut(s) 171
Bsh1236I CGCG 1 cut(s) 602
BshFI GGCC 4 cut(s) 120, 1217, 1852, 2017
BshNI GGYRCC 2 cut(s) 1022, 1435
BsiHKAI GWGCWC 3 cut(s) 243, 1485, 1564
BsiHKCI CYCGRG 1 cut(s) 1853
BsiSI CCGG 5 cut(s) 292, 406, 489, 677, 1433
BsiWI CGTACG 1 cut(s) 638
BslFI GGGAC 3 cut(s) 293, 593, 912
BslI CCNNNNNNNGG 2 cut(s) 232, 2249
BsmAI GTCTC 3 cut(s) 330, 1421, 1949
BsmFI GGGAC 3 cut(s) 293, 593, 912
BsnI GGCC 4 cut(s) 120, 1217, 1852, 2017
BsoBI CYCGRG 1 cut(s) 1853
Bsp119I TTCGAA 1 cut(s) 627
Bsp1286I GDGCHC 4 cut(s) 243, 1472, 1485, 1564
Bsp143I GATC 6 cut(s) 76, 993, 1508, 1683, 1693, 1903
Bsp19I CCATGG 1 cut(s) 2075
BspACI CCGC 6 cut(s) 300, 522, 622, 680, 1004, 1131
BspANI GGCC 4 cut(s) 120, 1217, 1852, 2017
BspCNI CTCAG 4 cut(s) 295, 1354, 1471, 2104
BspFNI CGCG 1 cut(s) 602
BspLI GGNNCC 2 cut(s) 1024, 1437
BspMAI CTGCAG 1 cut(s) 321
BspMI ACCTGC 2 cut(s) 310, 773
BspPI GGATC 1 cut(s) 1678
BspT104I TTCGAA 1 cut(s) 627
BspT107I GGYRCC 2 cut(s) 1022, 1435
BsrBI CCGCTC 1 cut(s) 1006
BsrDI GCAATG 1 cut(s) 2043
BsrFI RCCGGY 1 cut(s) 1432
BsrI ACTGG 6 cut(s) 403, 909, 1026, 1053, 1449, 2205
BssAI RCCGGY 1 cut(s) 1432
BssECI CCNNGG 8 cut(s) 121, 311, 370, 406, 814, 1246, 1854, 2075
BssMI GATC 6 cut(s) 76, 993, 1508, 1683, 1693, 1903
BssNI GRCGYC 2 cut(s) 948, 1436
BssT1I CCWWGG 4 cut(s) 370, 814, 1246, 2075
Bst2UI CCWGG 5 cut(s) 66, 123, 313, 807, 1849
Bst4CI ACNGT 6 cut(s) 272, 420, 541, 764, 772, 1270
Bst6I CTCTTC 1 cut(s) 225
BstACI GRCGYC 2 cut(s) 948, 1436
BstBI TTCGAA 1 cut(s) 627
BstC8I GCNNGC 6 cut(s) 239, 615, 745, 803, 1338, 2222
BstDEI CTNAG 5 cut(s) 282, 1341, 1479, 1738, 2112
BstDSI CCRYGG 1 cut(s) 2075
BstEII GGTNACC 1 cut(s) 809
BstENI CCTNNNNNAGG 1 cut(s) 230
BstF5I GGATG 4 cut(s) 513, 961, 1485, 2164
BstFNI CGCG 1 cut(s) 602
BstH2I RGCGCY 1 cut(s) 1439
BstHHI GCGC 2 cut(s) 1336, 1438
BstKTI GATC 6 cut(s) 79, 996, 1511, 1686, 1696, 1906
BstMAI GTCTC 3 cut(s) 330, 1421, 1949
BstMBI GATC 6 cut(s) 76, 993, 1508, 1683, 1693, 1903
BstMWI GCNNNNNNNGC 6 cut(s) 50, 56, 126, 408, 1979, 2014
BstNI CCWGG 5 cut(s) 66, 123, 313, 807, 1849
BstNSI RCATGY 4 cut(s) 439, 747, 805, 2224
BstPI GGTNACC 1 cut(s) 809
BstSCI CCNGG 6 cut(s) 64, 121, 311, 405, 805, 1847
BstSFI CTRYAG 1 cut(s) 317
BstSLI GKGCMC 1 cut(s) 1472
BstUI CGCG 1 cut(s) 602
BstV1I GCAGC 7 cut(s) 56, 62, 113, 303, 362, 606, 1515
BstV2I GAAGAC 4 cut(s) 200, 273, 1866, 2112
BstXI CCANNNNNNTGG 1 cut(s) 836
BsuI GTATCC 2 cut(s) 472, 1727
BsuRI GGCC 4 cut(s) 120, 1217, 1852, 2017
BtgI CCRYGG 1 cut(s) 2075
BtsCI GGATG 4 cut(s) 513, 961, 1485, 2164
BtsIMutI CAGTG 3 cut(s) 1033, 2109, 2212
BveI ACCTGC 2 cut(s) 310, 773
Cac8I GCNNGC 6 cut(s) 239, 615, 745, 803, 1338, 2222
CfoI GCGC 2 cut(s) 1336, 1438
Cfr10I RCCGGY 1 cut(s) 1432
Cfr13I GGNCC 3 cut(s) 119, 294, 1851
CseI GACGC 1 cut(s) 2153
Csp6I GTAC 7 cut(s) 421, 639, 765, 937, 2116, 2199, 2212
CspCI CAANNNNNGTGG 2 cut(s) 1812, 1847
CviQI GTAC 7 cut(s) 421, 639, 765, 937, 2116, 2199, 2212
DdeI CTNAG 5 cut(s) 282, 1341, 1479, 1738, 2112
DinI GGCGCC 1 cut(s) 1437
DpnI GATC 6 cut(s) 78, 995, 1510, 1685, 1695, 1905
DpnII GATC 6 cut(s) 76, 993, 1508, 1683, 1693, 1903
Eam1104I CTCTTC 1 cut(s) 225
EarI CTCTTC 1 cut(s) 225
Ecl136II GAGCTC 1 cut(s) 241
Eco130I CCWWGG 4 cut(s) 370, 814, 1246, 2075
Eco147I AGGCCT 1 cut(s) 2017
Eco24I GRGCYC 1 cut(s) 243
Eco47I GGWCC 1 cut(s) 294
Eco53kI GAGCTC 1 cut(s) 241
Eco57I CTGAAG 1 cut(s) 2109
Eco88I CYCGRG 1 cut(s) 1853
Eco91I GGTNACC 1 cut(s) 809
EcoICRI GAGCTC 1 cut(s) 241
EcoNI CCTNNNNNAGG 1 cut(s) 230
EcoO109I RGGNCCY 1 cut(s) 119
EcoO65I GGTNACC 1 cut(s) 809
EcoRI GAATTC 3 cut(s) 143, 629, 2137
EcoRII CCWGG 5 cut(s) 64, 121, 311, 805, 1847
EcoT14I CCWWGG 4 cut(s) 370, 814, 1246, 2075
EcoT22I ATGCAT 1 cut(s) 971
EcoT38I GRGCYC 1 cut(s) 243
EgeI GGCGCC 1 cut(s) 1437
EheI GGCGCC 1 cut(s) 1437
ErhI CCWWGG 4 cut(s) 370, 814, 1246, 2075
FalI AAGNNNNNCTT 4 cut(s) 1713, 1745, 1821, 1853
FaqI GGGAC 3 cut(s) 293, 593, 912
FauI CCCGC 1 cut(s) 1011
FauNDI CATATG 3 cut(s) 443, 575, 2245
Fnu4HI GCNGC 8 cut(s) 51, 70, 127, 317, 376, 595, 1132, 1529
FokI GGATG 4 cut(s) 500, 968, 1472, 2171
FriOI GRGCYC 1 cut(s) 243
Fsp4HI GCNGC 8 cut(s) 51, 70, 127, 317, 376, 595, 1132, 1529
FspBI CTAG 9 cut(s) 455, 519, 1158, 1565, 1691, 1871, 2019, 2045, 2181
GlaI GCGC 2 cut(s) 1335, 1437
GluI GCNGC 8 cut(s) 51, 70, 127, 317, 376, 595, 1132, 1529
GsaI CCCAGC 1 cut(s) 175
HaeII RGCGCY 1 cut(s) 1439
HaeIII GGCC 4 cut(s) 120, 1217, 1852, 2017
HapII CCGG 5 cut(s) 292, 406, 489, 677, 1433
HgaI GACGC 1 cut(s) 2153
HhaI GCGC 2 cut(s) 1336, 1438
Hin1I GRCGYC 2 cut(s) 948, 1436
Hin6I GCGC 2 cut(s) 1334, 1436
HinP1I GCGC 2 cut(s) 1334, 1436
HincII GTYRAC 3 cut(s) 469, 549, 1939
HindII GTYRAC 3 cut(s) 469, 549, 1939
HinfI GANTC 7 cut(s) 303, 581, 703, 820, 866, 1242, 1762
HpaII CCGG 5 cut(s) 292, 406, 489, 677, 1433
HphI GGTGA 5 cut(s) 205, 1262, 1378, 1414, 2180
Hpy166II GTNNAC 6 cut(s) 423, 469, 549, 1273, 1450, 1939
Hpy188I TCNGA 8 cut(s) 537, 887, 1344, 1480, 1663, 1799, 2089, 2143
Hpy188III TCNNGA 7 cut(s) 455, 929, 1677, 1691, 1922, 2102, 2181
Hpy8I GTNNAC 6 cut(s) 423, 469, 549, 1273, 1450, 1939
Hpy99I CGWCG 1 cut(s) 430
HpyAV CCTTC 4 cut(s) 728, 926, 1207, 1247
HpyCH4III ACNGT 6 cut(s) 272, 420, 541, 764, 772, 1270
HpyCH4IV ACGT 7 cut(s) 383, 890, 948, 1350, 1712, 1785, 1950
HpyF10VI GCNNNNNNNGC 6 cut(s) 50, 56, 126, 408, 1979, 2014
HpyF3I CTNAG 5 cut(s) 282, 1341, 1479, 1738, 2112
HpySE526I ACGT 7 cut(s) 383, 890, 948, 1350, 1712, 1785, 1950
Hsp92I GRCGYC 2 cut(s) 948, 1436
HspAI GCGC 2 cut(s) 1334, 1436
KasI GGCGCC 1 cut(s) 1435
Kzo9I GATC 6 cut(s) 76, 993, 1508, 1683, 1693, 1903
LmnI GCTCC 7 cut(s) 246, 491, 1525, 1559, 1670, 1813, 2041
Lsp1109I GCAGC 7 cut(s) 56, 62, 113, 303, 362, 606, 1515
LweI GCATC 1 cut(s) 978
MaeI CTAG 9 cut(s) 455, 519, 1158, 1565, 1691, 1871, 2019, 2045, 2181
MaeII ACGT 7 cut(s) 383, 890, 948, 1350, 1712, 1785, 1950
MaeIII GTNAC 7 cut(s) 272, 713, 785, 809, 1346, 1781, 2059
MalI GATC 6 cut(s) 78, 995, 1510, 1685, 1695, 1905
MbiI CCGCTC 1 cut(s) 1006
MboI GATC 6 cut(s) 76, 993, 1508, 1683, 1693, 1903
MboII GAAGA 8 cut(s) 205, 242, 278, 1098, 1214, 1871, 1913, 2117
MfeI CAATTG 1 cut(s) 39
MhlI GDGCHC 4 cut(s) 243, 1472, 1485, 1564
MluI ACGCGT 1 cut(s) 600
Mly113I GGCGCC 1 cut(s) 1436
MlyI GAGTC 1 cut(s) 575
MmeI TCCRAC 3 cut(s) 160, 1033, 1686
Mph1103I ATGCAT 1 cut(s) 971
MroXI GAANNNNTTC 3 cut(s) 359, 913, 1115
MseI TTAA 4 cut(s) 687, 1326, 1359, 2000
MslI CAYNNNNRTG 4 cut(s) 834, 1395, 1519, 1608
MspA1I CMGCKG 1 cut(s) 300
MspI CCGG 5 cut(s) 292, 406, 489, 677, 1433
MspR9I CCNGG 6 cut(s) 66, 123, 313, 407, 807, 1849
MunI CAATTG 1 cut(s) 39
MvaI CCWGG 5 cut(s) 66, 123, 313, 807, 1849
MvnI CGCG 1 cut(s) 602
MwoI GCNNNNNNNGC 6 cut(s) 50, 56, 126, 408, 1979, 2014
NarI GGCGCC 1 cut(s) 1436
NciI CCSGG 1 cut(s) 407
NcoI CCATGG 1 cut(s) 2075
NdeI CATATG 3 cut(s) 443, 575, 2245
NdeII GATC 6 cut(s) 76, 993, 1508, 1683, 1693, 1903
NlaIV GGNNCC 2 cut(s) 1024, 1437
NmuCI GTSAC 3 cut(s) 713, 1346, 1781
NsiI ATGCAT 1 cut(s) 971
NspI RCATGY 4 cut(s) 439, 747, 805, 2224
NspV TTCGAA 1 cut(s) 627
OliI CACNNNNGTG 1 cut(s) 1519
PaeI GCATGC 3 cut(s) 747, 805, 2224
PaqCI CACCTGC 1 cut(s) 310
PceI AGGCCT 1 cut(s) 2017
PcsI WCGNNNNNNNCGW 2 cut(s) 1851, 1947
PdmI GAANNNNTTC 3 cut(s) 359, 913, 1115
PfeI GAWTC 6 cut(s) 303, 703, 820, 866, 1242, 1762
Pfl23II CGTACG 1 cut(s) 638
PflFI GACNNNGTC 1 cut(s) 1934
PflMI CCANNNNNTGG 1 cut(s) 2249
PkrI GCNGC 8 cut(s) 52, 71, 128, 318, 377, 596, 1133, 1530
PleI GAGTC 1 cut(s) 575
PluTI GGCGCC 1 cut(s) 1439
PpsI GAGTC 1 cut(s) 575
PshBI ATTAAT 1 cut(s) 1359
Psp124BI GAGCTC 1 cut(s) 243
Psp1406I AACGTT 2 cut(s) 1712, 1950
Psp6I CCWGG 5 cut(s) 64, 121, 311, 805, 1847
PspEI GGTNACC 1 cut(s) 809
PspFI CCCAGC 1 cut(s) 171
PspGI CCWGG 5 cut(s) 64, 121, 311, 805, 1847
PspLI CGTACG 1 cut(s) 638
PspN4I GGNNCC 2 cut(s) 1024, 1437
PspPI GGNCC 3 cut(s) 119, 294, 1851
PsrI GAACNNNNNNTAC 2 cut(s) 347, 379
PstI CTGCAG 1 cut(s) 321
PsyI GACNNNGTC 1 cut(s) 1934
RsaI GTAC 7 cut(s) 422, 640, 766, 938, 2117, 2200, 2213
RsaNI GTAC 7 cut(s) 421, 639, 765, 937, 2116, 2199, 2212
RseI CAYNNNNRTG 4 cut(s) 834, 1395, 1519, 1608
SacI GAGCTC 1 cut(s) 243
SaqAI TTAA 4 cut(s) 687, 1326, 1359, 2000
SatI GCNGC 8 cut(s) 51, 70, 127, 317, 376, 595, 1132, 1529
Sau3AI GATC 6 cut(s) 76, 993, 1508, 1683, 1693, 1903
Sau96I GGNCC 3 cut(s) 119, 294, 1851
ScaI AGTACT 1 cut(s) 2117
SchI GAGTC 1 cut(s) 575
ScrFI CCNGG 6 cut(s) 66, 123, 313, 407, 807, 1849
SduI GDGCHC 4 cut(s) 243, 1472, 1485, 1564
SfaNI GCATC 1 cut(s) 978
SfcI CTRYAG 1 cut(s) 317
SfoI GGCGCC 1 cut(s) 1437
SfuI TTCGAA 1 cut(s) 627
SgrAI CRCCGGYG 1 cut(s) 1432
SinI GGWCC 1 cut(s) 294
SmiMI CAYNNNNRTG 4 cut(s) 834, 1395, 1519, 1608
SmlI CTYRAG 2 cut(s) 54, 1208
SmoI CTYRAG 2 cut(s) 54, 1208
SphI GCATGC 3 cut(s) 747, 805, 2224
SseBI AGGCCT 1 cut(s) 2017
SsiI CCGC 6 cut(s) 300, 522, 622, 680, 1004, 1131
SspDI GGCGCC 1 cut(s) 1435
SspI AATATT 1 cut(s) 1284
SspMI CTAG 9 cut(s) 455, 519, 1158, 1565, 1691, 1871, 2019, 2045, 2181
SstI GAGCTC 1 cut(s) 243
StuI AGGCCT 1 cut(s) 2017
StyD4I CCNGG 6 cut(s) 64, 121, 311, 405, 805, 1847
StyI CCWWGG 4 cut(s) 370, 814, 1246, 2075
TaaI ACNGT 6 cut(s) 272, 420, 541, 764, 772, 1270
TaiI ACGT 7 cut(s) 386, 893, 951, 1353, 1715, 1788, 1953
TaqI TCGA 1 cut(s) 627
TatI WGTACW 2 cut(s) 764, 2115
TauI GCSGC 1 cut(s) 1134
TfiI GAWTC 6 cut(s) 303, 703, 820, 866, 1242, 1762
Tru1I TTAA 4 cut(s) 687, 1326, 1359, 2000
Tru9I TTAA 4 cut(s) 687, 1326, 1359, 2000
TscAI CASTG 3 cut(s) 1033, 2116, 2212
TseFI GTSAC 3 cut(s) 713, 1346, 1781
TseI GCWGC 7 cut(s) 50, 69, 126, 316, 375, 594, 1528
Tsp45I GTSAC 3 cut(s) 713, 1346, 1781
TspDTI ATGAA 9 cut(s) 671, 972, 1005, 1084, 1447, 1653, 1882, 2039, 2150
TspGWI ACGGA 1 cut(s) 1787
TspRI CASTG 3 cut(s) 1033, 2116, 2212
Tth111I GACNNNGTC 1 cut(s) 1934
Van91I CCANNNNNTGG 1 cut(s) 2249
VpaK11BI GGWCC 1 cut(s) 294
VspI ATTAAT 1 cut(s) 1359
XagI CCTNNNNNAGG 1 cut(s) 230
XapI RAATTY 6 cut(s) 143, 187, 246, 629, 898, 2137
XbaI TCTAGA 3 cut(s) 454, 1690, 2180
XceI RCATGY 4 cut(s) 439, 747, 805, 2224
XcmI CCANNNNNNNNNTGG 2 cut(s) 80, 2073
XmnI GAANNNNTTC 3 cut(s) 359, 913, 1115
XspI CTAG 9 cut(s) 455, 519, 1158, 1565, 1691, 1871, 2019, 2045, 2181
ZraI GACGTC 1 cut(s) 949
ZrmI AGTACT 1 cut(s) 2117
Zsp2I ATGCAT 1 cut(s) 971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.