Rmu_sc0011974.1_g000006

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011974.1
OG0000066
Physical Location & Seq
Reverse (-)
17546 .. 20534
2989 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011974.1_g000006.1.cds

Sequence Viewer

Length: 2343 bp
atggccttagtagatgtggggatgtttgttatgcaagtctcattggcaatagtagcagcttcaataacaaccaccaccacccaagtagcagctgatcaagccagcctcttaccgcctcaagccaagcctaactgccccgaccgttgtggtgacctcacaatcccatacccatttggcatcggtgacggctgttaccgacagttgccggaacaaaatcatcaattcagcatcacttgtgaccagtccaccaaacctccatcagcgtactggacaagtgctaaacgctggacaagtgctaaagtccgggttacaaacttcaacatttcagagggtgagttgcaaattatgagttacatagcgaaagattgttatgacgcccggggtagtcgaacataccgaaccacccctttgctccgagttgatcctcctttcaccatctccagtcgcaaaaacaagttctttgccgttggttgtgacacttacgcaatttttcgaggttttcgaggggaagaagagttggtaaccgggtgcatgtctgtgtgcaccacccttggcggtgtcgattgggagtcttgcactggcgttggctgttgccaaactcaagttccgcatggactgaaaaaccgcaccgtgagattgagtagttataacggccacaaggagatatggagctttaacccttgtagttacgcttttattgtgcaagatggcctcttcacatttaatactacgagttttgaactactgaacaacatccaggagcttcccatggtacttaactgggacatgggagacgtgccatgcgaggtagctggaaagagaagtttggattatgcatgcaaggctaatagcaagtgtgctaatcggagaaatttcaccggcggcaatggttactattgccagtgcttgcctggctacgaaggaaacccatatctcgatattgacgagtgctcggctgaaactaacccctgcgagaatggaacatgcctaaattcacctgctggcaattactcttgtaaatgtcataaagggttccggagtgatggtccatggaagtgcgttccctcccccaaagttaacaacactttcttgaaaattttattgggtatcagcataagcgtctttgtattgatgactggaatttttgggatatattgcggattcaagaggcgacaattcgaaagacttaaagcaaagtacttcgatgcaaatggcggcccaaagttgctagaaaaattgtccactcaaaaagaatctcttgagacaaaagcccaaatctttactgcagaagtacttaagaaggcaacaaacagttaccatgaaagtgggaagcttggtgaaggaggctatggaacagtctacaaaggtatactcaaggatgaaagagtggttgcaataaagaagtccaaaaatactgcccagatcgagagtgaccagtttgttaatgaggtggttgttctctctcaaatcaatcataaaaatgtggtgaggcttataggttgttgtttggagacacaaatgcctttgttagtctatgagtttgttggcaacggcactctttatgagcacattcatagaataaatgggagagaaccactttcgtgggcgtttcgattgaagatagccgcagaaactgcaagtgcactctcatacttacaccactcgacatcgatcccaatcattcaccgagatgtaaaagcaaccaatatactactagatgagaagttcaccgcaaaagtgtcggactttggagcttcccgtttggttcccgaagatccaaatcaacttccaactatagtgcaagggacaatggggtacttagaccctgaatatcttcaatcaaacatactcacagacaaaagtgacgtttatagctttggagttgtccttgtagagctactcacaagcaaaaaggtggtttcatttgatcgatccgaggaagagagaaacctcgccaatgtctttgtttctgcagcccaaaagggtatgttgaatccaattcttgatgatgaaatagtgaaggatggaaatttggagatcattgaaaaagtggccaatctcgccaaaaattgtttaagcttaaaaggagacgacaggccttccatgaaagatgtagagagggaactggatggaatattattgcaaactttggccatagaaccaggggtaaagtctcattcctctgccaaagagatagaccactctcttgagtcgtcttcaagcgctttcgttgtcaaggttagtggtgaagatgaaggtgataacaccaccaatgttacaagttacgacgtcagcatggaaaatcaagcccaaatgttgaagccttttgatgatggtcggtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK cEGF

Protein Analysis

780

Amino Acids

86.25

Weight (kDa)

6.0

Isoelectric Point (pI)

35.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 648
AarI CACCTGC 1 cut(s) 1006
AatII GACGTC 1 cut(s) 2292
Acc36I ACCTGC 1 cut(s) 1006
AccI GTMKAC 2 cut(s) 1359, 1369
AccIII TCCGGA 1 cut(s) 1035
AciI CCGC 9 cut(s) 113, 555, 608, 625, 882, 1158, 1215, 1626, 1731
AclWI GGATC 4 cut(s) 416, 1666, 1769, 1926
AcoI YGGCCR 3 cut(s) 652, 2052, 2151
AcsI RAATTY 5 cut(s) 871, 991, 1095, 1140, 2029
AcyI GRCGYC 2 cut(s) 375, 2289
AfaI GTAC 5 cut(s) 266, 774, 1199, 1293, 1817
AfeI AGCGCT 1 cut(s) 2224
AflII CTTAAG 1 cut(s) 1295
AjiI CACGTC 1 cut(s) 796
AjnI CCWGG 3 cut(s) 756, 910, 2161
AjuI GAANNNNNNNTTGG 4 cut(s) 588, 620, 1085, 1117
AleI CACNNNNGTG 1 cut(s) 1600
Alw21I GWGCWC 4 cut(s) 545, 953, 1569, 1645
Alw26I GTCTC 6 cut(s) 43, 786, 1256, 1505, 2082, 2178
Alw44I GTGCAC 2 cut(s) 541, 1641
AlwI GGATC 4 cut(s) 416, 1666, 1769, 1926
AlwNI CAGNNNCTG 1 cut(s) 1634
Ama87I CYCGRG 1 cut(s) 378
Aor13HI TCCGGA 1 cut(s) 1035
Aor51HI AGCGCT 1 cut(s) 2224
AoxI GGCC 7 cut(s) 3, 652, 709, 1216, 2052, 2096, 2151
ApaLI GTGCAC 2 cut(s) 541, 1641
ApeKI GCWGC 3 cut(s) 56, 89, 1973
ApoI RAATTY 5 cut(s) 871, 991, 1095, 1140, 2029
Asp700I GAANNNNTTC 1 cut(s) 1833
AspLEI GCGC 1 cut(s) 2225
AspS9I GGNCC 2 cut(s) 1046, 1217
AsuC2I CCSGG 4 cut(s) 305, 379, 380, 526
AsuII TTCGAA 1 cut(s) 1179
AvaI CYCGRG 1 cut(s) 378
AvaII GGWCC 1 cut(s) 1046
BaeGI GKGCMC 2 cut(s) 545, 1645
BalI TGGCCA 2 cut(s) 2054, 2153
BbsI GAAGAC 1 cut(s) 2208
Bbv12I GWGCWC 4 cut(s) 545, 953, 1569, 1645
BbvI GCAGC 3 cut(s) 68, 101, 1985
BccI CCATC 7 cut(s) 265, 443, 701, 1037, 2018, 2123, 2327
BceAI ACGGC 4 cut(s) 202, 449, 667, 1567
BcgI CGANNNNNNTGC 2 cut(s) 1722, 1756
BciT130I CCWGG 3 cut(s) 758, 912, 2163
BclI TGATCA 1 cut(s) 94
BcnI CCSGG 4 cut(s) 305, 379, 380, 526
BcoDI GTCTC 6 cut(s) 43, 786, 1256, 1505, 2082, 2178
BfaI CTAG 2 cut(s) 1229, 1715
BfmI CTRYAG 3 cut(s) 1284, 1794, 1971
BfoI RGCGCY 1 cut(s) 2226
BfrI CTTAAG 1 cut(s) 1295
BfuAI ACCTGC 1 cut(s) 1006
BisI GCNGC 6 cut(s) 57, 90, 883, 1216, 1626, 1974
BlsI GCNGC 6 cut(s) 58, 91, 884, 1217, 1627, 1975
BmcAI AGTACT 2 cut(s) 1199, 1293
Bme1390I CCNGG 7 cut(s) 305, 379, 380, 526, 758, 912, 2163
Bme18I GGWCC 1 cut(s) 1046
BmeT110I CYCGRG 1 cut(s) 378
BmgBI CACGTC 1 cut(s) 796
BmgT120I GGNCC 2 cut(s) 1046, 1217
BmiI GGNNCC 2 cut(s) 1034, 1767
BmrFI CCNGG 7 cut(s) 305, 379, 380, 526, 758, 912, 2163
BmrI ACTGGG 1 cut(s) 790
BmsI GCATC 3 cut(s) 186, 237, 1195
BmuI ACTGGG 1 cut(s) 790
BpiI GAAGAC 1 cut(s) 2208
BpmI CTGGAG 1 cut(s) 424
Bpu14I TTCGAA 1 cut(s) 1179
BpuEI CTTGAG 5 cut(s) 102, 585, 1280, 1358, 2228
BpuMI CCSGG 4 cut(s) 305, 379, 380, 526
Bsa29I ATCGAT 2 cut(s) 1670, 1930
BsaBI GATNNNNATC 2 cut(s) 1676, 1779
BsaHI GRCGYC 2 cut(s) 375, 2289
BsaJI CCNNGG 7 cut(s) 378, 379, 550, 768, 1049, 1935, 2162
BsaWI WCCGGW 1 cut(s) 1035
BsaXI ACNNNNNCTCC 4 cut(s) 238, 268, 1030, 1060
Bse118I RCCGGY 1 cut(s) 878
Bse1I ACTGG 9 cut(s) 241, 272, 441, 583, 785, 901, 1141, 1435, 2130
Bse3DI GCAATG 1 cut(s) 892
Bse8I GATNNNNATC 2 cut(s) 1676, 1779
BseAI TCCGGA 1 cut(s) 1035
BseBI CCWGG 3 cut(s) 758, 912, 2163
BseCI ATCGAT 2 cut(s) 1670, 1930
BseDI CCNNGG 7 cut(s) 378, 379, 550, 768, 1049, 1935, 2162
BseGI GGATG 5 cut(s) 27, 753, 1384, 2029, 2134
BseJI GATNNNNATC 2 cut(s) 1676, 1779
BseMI GCAATG 1 cut(s) 892
BseNI ACTGG 9 cut(s) 241, 272, 441, 583, 785, 901, 1141, 1435, 2130
BseSI GKGCMC 2 cut(s) 545, 1645
BseXI GCAGC 3 cut(s) 68, 101, 1985
Bsh1285I CGRYCG 1 cut(s) 142
BshFI GGCC 7 cut(s) 5, 654, 711, 1218, 2054, 2098, 2153
BshVI ATCGAT 2 cut(s) 1670, 1930
BsiEI CGRYCG 1 cut(s) 142
BsiHKAI GWGCWC 4 cut(s) 545, 953, 1569, 1645
BsiHKCI CYCGRG 1 cut(s) 378
BsiSI CCGG 6 cut(s) 206, 304, 379, 525, 879, 1036
BslFI GGGAC 2 cut(s) 797, 1819
BsmAI GTCTC 6 cut(s) 43, 786, 1256, 1505, 2082, 2178
BsmBI CGTCTC 2 cut(s) 786, 2082
BsmFI GGGAC 2 cut(s) 797, 1819
BsnI GGCC 7 cut(s) 5, 654, 711, 1218, 2054, 2098, 2153
BsoBI CYCGRG 1 cut(s) 378
Bsp119I TTCGAA 1 cut(s) 1179
Bsp1286I GDGCHC 4 cut(s) 545, 953, 1569, 1645
Bsp13I TCCGGA 1 cut(s) 1035
Bsp143I GATC 8 cut(s) 94, 421, 1422, 1671, 1774, 1927, 1931, 2037
Bsp19I CCATGG 2 cut(s) 768, 1049
BspACI CCGC 9 cut(s) 113, 555, 608, 625, 882, 1158, 1215, 1626, 1731
BspANI GGCC 7 cut(s) 5, 654, 711, 1218, 2054, 2098, 2153
BspDI ATCGAT 2 cut(s) 1670, 1930
BspEI TCCGGA 1 cut(s) 1035
BspLI GGNNCC 2 cut(s) 1034, 1767
BspMAI CTGCAG 2 cut(s) 1288, 1975
BspMI ACCTGC 1 cut(s) 1006
BspPI GGATC 4 cut(s) 416, 1666, 1769, 1926
BspT104I TTCGAA 1 cut(s) 1179
BspTI CTTAAG 1 cut(s) 1295
BsrDI GCAATG 1 cut(s) 892
BsrFI RCCGGY 1 cut(s) 878
BsrI ACTGG 9 cut(s) 241, 272, 441, 583, 785, 901, 1141, 1435, 2130
BssAI RCCGGY 1 cut(s) 878
BssECI CCNNGG 7 cut(s) 378, 379, 550, 768, 1049, 1935, 2162
BssMI GATC 8 cut(s) 94, 421, 1422, 1671, 1774, 1927, 1931, 2037
BssNAI GTATAC 1 cut(s) 1370
BssNI GRCGYC 2 cut(s) 375, 2289
BssT1I CCWWGG 3 cut(s) 550, 768, 1049
Bst1107I GTATAC 1 cut(s) 1370
Bst2UI CCWGG 3 cut(s) 758, 912, 2163
Bst4CI ACNGT 5 cut(s) 143, 201, 631, 1313, 1357
Bst6I CTCTTC 3 cut(s) 507, 719, 1935
BstACI GRCGYC 2 cut(s) 375, 2289
BstAFI CTTAAG 1 cut(s) 1295
BstAPI GCANNNNNTGC 1 cut(s) 1634
BstBI TTCGAA 1 cut(s) 1179
BstC8I GCNNGC 4 cut(s) 103, 838, 908, 1003
BstDEI CTNAG 2 cut(s) 7, 1819
BstDSI CCRYGG 2 cut(s) 768, 1049
BstEII GGTNACC 2 cut(s) 149, 520
BstF5I GGATG 5 cut(s) 27, 753, 1384, 2029, 2134
BstH2I RGCGCY 1 cut(s) 2226
BstHHI GCGC 1 cut(s) 2225
BstKTI GATC 8 cut(s) 97, 424, 1425, 1674, 1777, 1930, 1934, 2040
BstMAI GTCTC 6 cut(s) 43, 786, 1256, 1505, 2082, 2178
BstMBI GATC 8 cut(s) 94, 421, 1422, 1671, 1774, 1927, 1931, 2037
BstMCI CGRYCG 1 cut(s) 142
BstMWI GCNNNNNNNGC 6 cut(s) 53, 98, 842, 912, 1634, 2060
BstNI CCWGG 3 cut(s) 758, 912, 2163
BstNSI RCATGY 3 cut(s) 535, 840, 987
BstPI GGTNACC 2 cut(s) 149, 520
BstSCI CCNGG 7 cut(s) 303, 377, 378, 524, 756, 910, 2161
BstSFI CTRYAG 3 cut(s) 1284, 1794, 1971
BstSLI GKGCMC 2 cut(s) 545, 1645
BstV1I GCAGC 3 cut(s) 68, 101, 1985
BstV2I GAAGAC 1 cut(s) 2208
BstX2I RGATCY 1 cut(s) 1774
BstXI CCANNNNNNTGG 2 cut(s) 1325, 1602
BstYI RGATCY 1 cut(s) 1774
BstZ17I GTATAC 1 cut(s) 1370
Bsu15I ATCGAT 2 cut(s) 1670, 1930
BsuRI GGCC 7 cut(s) 5, 654, 711, 1218, 2054, 2098, 2153
BsuTUI ATCGAT 2 cut(s) 1670, 1930
BtgI CCRYGG 2 cut(s) 768, 1049
BtrI CACGTC 1 cut(s) 796
BtsCI GGATG 5 cut(s) 27, 753, 1384, 2029, 2134
BtsIMutI CAGTG 2 cut(s) 576, 908
BveI ACCTGC 1 cut(s) 1006
Cac8I GCNNGC 4 cut(s) 103, 838, 908, 1003
CaiI CAGNNNCTG 1 cut(s) 1634
CfoI GCGC 1 cut(s) 2225
Cfr10I RCCGGY 1 cut(s) 878
Cfr13I GGNCC 2 cut(s) 1046, 1217
Cfr9I CCCGGG 1 cut(s) 378
ClaI ATCGAT 2 cut(s) 1670, 1930
CseI GACGC 2 cut(s) 383, 1108
Csp6I GTAC 5 cut(s) 265, 773, 1198, 1292, 1816
CspCI CAANNNNNGTGG 2 cut(s) 2224, 2259
CviQI GTAC 5 cut(s) 265, 773, 1198, 1292, 1816
DdeI CTNAG 2 cut(s) 7, 1819
DpnI GATC 8 cut(s) 96, 423, 1424, 1673, 1776, 1929, 1933, 2039
DpnII GATC 8 cut(s) 94, 421, 1422, 1671, 1774, 1927, 1931, 2037
EaeI YGGCCR 3 cut(s) 652, 2052, 2151
Eam1104I CTCTTC 3 cut(s) 507, 719, 1935
EarI CTCTTC 3 cut(s) 507, 719, 1935
Eco130I CCWWGG 3 cut(s) 550, 768, 1049
Eco147I AGGCCT 1 cut(s) 2098
Eco47I GGWCC 1 cut(s) 1046
Eco47III AGCGCT 1 cut(s) 2224
Eco88I CYCGRG 1 cut(s) 378
Eco91I GGTNACC 2 cut(s) 149, 520
EcoO65I GGTNACC 2 cut(s) 149, 520
EcoRII CCWGG 3 cut(s) 756, 910, 2161
EcoT14I CCWWGG 3 cut(s) 550, 768, 1049
EcoT22I ATGCAT 1 cut(s) 838
ErhI CCWWGG 3 cut(s) 550, 768, 1049
Esp3I CGTCTC 2 cut(s) 786, 2082
FalI AAGNNNNNCTT 2 cut(s) 1242, 1274
FaqI GGGAC 2 cut(s) 797, 1819
FbaI TGATCA 1 cut(s) 94
FblI GTMKAC 2 cut(s) 1359, 1369
Fnu4HI GCNGC 6 cut(s) 57, 90, 883, 1216, 1626, 1974
FokI GGATG 5 cut(s) 34, 740, 1391, 2036, 2141
Fsp4HI GCNGC 6 cut(s) 57, 90, 883, 1216, 1626, 1974
FspBI CTAG 2 cut(s) 1229, 1715
GlaI GCGC 1 cut(s) 2224
GluI GCNGC 6 cut(s) 57, 90, 883, 1216, 1626, 1974
GsuI CTGGAG 1 cut(s) 424
HaeII RGCGCY 1 cut(s) 2226
HaeIII GGCC 7 cut(s) 5, 654, 711, 1218, 2054, 2098, 2153
HapII CCGG 6 cut(s) 206, 304, 379, 525, 879, 1036
HgaI GACGC 2 cut(s) 383, 1108
HhaI GCGC 1 cut(s) 2225
Hin1I GRCGYC 2 cut(s) 375, 2289
Hin6I GCGC 1 cut(s) 2223
HinP1I GCGC 1 cut(s) 2223
HincII GTYRAC 1 cut(s) 1078
HindII GTYRAC 1 cut(s) 1078
HindIII AAGCTT 2 cut(s) 1331, 2077
HinfI GANTC 5 cut(s) 569, 1161, 1253, 1993, 2210
HpaI GTTAAC 1 cut(s) 1078
HpaII CCGG 6 cut(s) 206, 304, 379, 525, 879, 1036
Hpy166II GTNNAC 8 cut(s) 246, 543, 1078, 1242, 1360, 1370, 1643, 1728
Hpy188I TCNGA 5 cut(s) 328, 416, 867, 1744, 1936
Hpy188III TCNNGA 9 cut(s) 935, 1036, 1090, 1165, 1259, 1426, 1769, 2003, 2207
Hpy8I GTNNAC 8 cut(s) 246, 543, 1078, 1242, 1360, 1370, 1643, 1728
Hpy99I CGWCG 1 cut(s) 2291
HpyAV CCTTC 6 cut(s) 914, 1294, 1334, 2014, 2109, 2249
HpyCH4III ACNGT 5 cut(s) 143, 201, 631, 1313, 1357
HpyCH4IV ACGT 3 cut(s) 795, 1866, 2289
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 98, 842, 912, 1634, 2060
HpyF3I CTNAG 2 cut(s) 7, 1819
HpySE526I ACGT 3 cut(s) 795, 1866, 2289
Hsp92I GRCGYC 2 cut(s) 375, 2289
HspAI GCGC 1 cut(s) 2223
Kpn2I TCCGGA 1 cut(s) 1035
Ksp22I TGATCA 1 cut(s) 94
KspAI GTTAAC 1 cut(s) 1078
Kzo9I GATC 8 cut(s) 94, 421, 1422, 1671, 1774, 1927, 1931, 2037
LmnI GCTCC 4 cut(s) 417, 669, 760, 1751
Lsp1109I GCAGC 3 cut(s) 68, 101, 1985
LweI GCATC 3 cut(s) 186, 237, 1195
MaeI CTAG 2 cut(s) 1229, 1715
MaeII ACGT 3 cut(s) 795, 1866, 2289
MalI GATC 8 cut(s) 96, 423, 1424, 1673, 1776, 1929, 1933, 2039
MboI GATC 8 cut(s) 94, 421, 1422, 1671, 1774, 1927, 1931, 2037
MboII GAAGA 9 cut(s) 521, 524, 706, 1630, 1784, 1826, 1952, 2208, 2261
MflI RGATCY 1 cut(s) 1774
MhlI GDGCHC 4 cut(s) 545, 953, 1569, 1645
MlsI TGGCCA 2 cut(s) 2054, 2153
MluNI TGGCCA 2 cut(s) 2054, 2153
MlyI GAGTC 2 cut(s) 578, 2219
MmeI TCCRAC 2 cut(s) 1722, 1814
Mox20I TGGCCA 2 cut(s) 2054, 2153
Mph1103I ATGCAT 1 cut(s) 838
MroI TCCGGA 1 cut(s) 1035
MroXI GAANNNNTTC 1 cut(s) 1833
MscI TGGCCA 2 cut(s) 2054, 2153
MseI TTAA 9 cut(s) 675, 723, 777, 1077, 1188, 1296, 1443, 2075, 2081
MslI CAYNNNNRTG 6 cut(s) 536, 1054, 1323, 1479, 1600, 1689
Msp20I TGGCCA 2 cut(s) 2054, 2153
MspA1I CMGCKG 1 cut(s) 92
MspCI CTTAAG 1 cut(s) 1295
MspI CCGG 6 cut(s) 206, 304, 379, 525, 879, 1036
MspR9I CCNGG 7 cut(s) 305, 379, 380, 526, 758, 912, 2163
MvaI CCWGG 3 cut(s) 758, 912, 2163
MwoI GCNNNNNNNGC 6 cut(s) 53, 98, 842, 912, 1634, 2060
NciI CCSGG 4 cut(s) 305, 379, 380, 526
NcoI CCATGG 2 cut(s) 768, 1049
NdeII GATC 8 cut(s) 94, 421, 1422, 1671, 1774, 1927, 1931, 2037
NlaIV GGNNCC 2 cut(s) 1034, 1767
NmeAIII GCCGAG 1 cut(s) 932
NmuCI GTSAC 6 cut(s) 149, 182, 236, 473, 1430, 1862
NsiI ATGCAT 1 cut(s) 838
NspI RCATGY 3 cut(s) 535, 840, 987
NspV TTCGAA 1 cut(s) 1179
OliI CACNNNNGTG 1 cut(s) 1600
PaeI GCATGC 1 cut(s) 840
PaqCI CACCTGC 1 cut(s) 1006
PceI AGGCCT 1 cut(s) 2098
PcsI WCGNNNNNNNCGW 4 cut(s) 394, 499, 801, 942
PdmI GAANNNNTTC 1 cut(s) 1833
PfeI GAWTC 3 cut(s) 1161, 1253, 1993
PfoI TCCNGGA 1 cut(s) 756
PkrI GCNGC 6 cut(s) 58, 91, 884, 1217, 1627, 1975
PleI GAGTC 2 cut(s) 577, 2218
PpsI GAGTC 2 cut(s) 577, 2218
PsiI TTATAA 1 cut(s) 648
Psp6I CCWGG 3 cut(s) 756, 910, 2161
PspEI GGTNACC 2 cut(s) 149, 520
PspGI CCWGG 3 cut(s) 756, 910, 2161
PspN4I GGNNCC 2 cut(s) 1034, 1767
PspPI GGNCC 2 cut(s) 1046, 1217
PstI CTGCAG 2 cut(s) 1288, 1975
PstNI CAGNNNCTG 1 cut(s) 1634
PsuI RGATCY 1 cut(s) 1774
PvuII CAGCTG 1 cut(s) 92
RsaI GTAC 5 cut(s) 266, 774, 1199, 1293, 1817
RsaNI GTAC 5 cut(s) 265, 773, 1198, 1292, 1816
RseI CAYNNNNRTG 6 cut(s) 536, 1054, 1323, 1479, 1600, 1689
SaqAI TTAA 9 cut(s) 675, 723, 777, 1077, 1188, 1296, 1443, 2075, 2081
SatI GCNGC 6 cut(s) 57, 90, 883, 1216, 1626, 1974
Sau3AI GATC 8 cut(s) 94, 421, 1422, 1671, 1774, 1927, 1931, 2037
Sau96I GGNCC 2 cut(s) 1046, 1217
ScaI AGTACT 2 cut(s) 1199, 1293
SchI GAGTC 2 cut(s) 578, 2219
ScrFI CCNGG 7 cut(s) 305, 379, 380, 526, 758, 912, 2163
SduI GDGCHC 4 cut(s) 545, 953, 1569, 1645
SfaNI GCATC 3 cut(s) 186, 237, 1195
SfcI CTRYAG 3 cut(s) 1284, 1794, 1971
SfuI TTCGAA 1 cut(s) 1179
SgrAI CRCCGGYG 1 cut(s) 878
SinI GGWCC 1 cut(s) 1046
SmaI CCCGGG 1 cut(s) 380
SmiMI CAYNNNNRTG 6 cut(s) 536, 1054, 1323, 1479, 1600, 1689
SmlI CTYRAG 6 cut(s) 117, 600, 1259, 1295, 1373, 2207
SmoI CTYRAG 6 cut(s) 117, 600, 1259, 1295, 1373, 2207
SphI GCATGC 1 cut(s) 840
SseBI AGGCCT 1 cut(s) 2098
SsiI CCGC 9 cut(s) 113, 555, 608, 625, 882, 1158, 1215, 1626, 1731
SspI AATATT 1 cut(s) 2136
SspMI CTAG 2 cut(s) 1229, 1715
StuI AGGCCT 1 cut(s) 2098
StyD4I CCNGG 7 cut(s) 303, 377, 378, 524, 756, 910, 2161
StyI CCWWGG 3 cut(s) 550, 768, 1049
TaaI ACNGT 5 cut(s) 143, 201, 631, 1313, 1357
TaiI ACGT 3 cut(s) 798, 1869, 2292
TatI WGTACW 2 cut(s) 1197, 1291
TauI GCSGC 3 cut(s) 885, 1218, 1628
TfiI GAWTC 3 cut(s) 1161, 1253, 1993
Tru1I TTAA 9 cut(s) 675, 723, 777, 1077, 1188, 1296, 1443, 2075, 2081
Tru9I TTAA 9 cut(s) 675, 723, 777, 1077, 1188, 1296, 1443, 2075, 2081
TscAI CASTG 2 cut(s) 583, 908
TseFI GTSAC 6 cut(s) 149, 182, 236, 473, 1430, 1862
TseI GCWGC 3 cut(s) 56, 89, 1973
Tsp45I GTSAC 6 cut(s) 149, 182, 236, 473, 1430, 1862
TspDTI ATGAA 7 cut(s) 1335, 1395, 1562, 1911, 2025, 2120, 2268
TspMI CCCGGG 1 cut(s) 378
TspRI CASTG 2 cut(s) 583, 908
Vha464I CTTAAG 1 cut(s) 1295
VneI GTGCAC 2 cut(s) 541, 1641
VpaK11BI GGWCC 1 cut(s) 1046
XapI RAATTY 5 cut(s) 871, 991, 1095, 1140, 2029
XceI RCATGY 3 cut(s) 535, 840, 987
XcmI CCANNNNNNNNNTGG 2 cut(s) 264, 908
XmaI CCCGGG 1 cut(s) 378
XmiI GTMKAC 2 cut(s) 1359, 1369
XmnI GAANNNNTTC 1 cut(s) 1833
XspI CTAG 2 cut(s) 1229, 1715
ZraI GACGTC 1 cut(s) 2290
ZrmI AGTACT 2 cut(s) 1199, 1293
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.