Rorug06G0231700

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
37257421 .. 37270255
12835 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0231700.1

Sequence Viewer

Length: 2682 bp
ATGGCGGCGGCCGCGAGTGCCCCGTGGCAGCCACAGAAGGAGGGCCTCACGGCGATCTGTGGGTTGCTGGAGCAGCAGATTTCGCCGACTTCCTCCGCTGACAAGTCTCAGATTTGGCACCAACTCCAAGCCTACTCTCAGAACCCCGAGTTCCATAATTACCTTGTTTTCATTCTCACACGCGCCGAGGGTACATCAGTGGAGATTCGACAAGCGGCGGGGTTGCTTTTGAAAAACAACCTTAGAAATGCATATAACTCCATGGATCCTGCATACCAGCAGTATATCAAGTCGGAATTACTGCCTTGCTTGGGATCACCAGATAGGCACATCAGGTCTACAGTAGGCACCATTATAAGTGTTGTTGTTCAACTCGGAGGAGTTATGGGATGGCCGGAATTACTGCAAGCTCTTGTAACTTGTTTGGACAGTAATGACGTAAATCACATGGAAGGTGCTATGGATGCATTATCCAAGGTTTGTGAGGATATACCTCAGGTGCTTGATTCAGATGTACCCGGGTTGCCTGAACGCCCCATCAACATATTCCTTCCTAGAATGCTTAAGCTTTTCCAGTCACCACATTCATCCCTCAGAAAGCTTTCCCTGGGTTCTGTAAATCAATACATTATGTTGATGCCAGCGGCTTTATATGCGTGTATGGATCAATATCTTCAGGGGTTGTTTGTCCTTGCTAATGACCCTTCTTCAGAAGTGAGGAAATTGGTATGTGCAGCATTTGTGCAGCTGATTGAAGTTCGTCCGGGGTTCTTGGAGCCACAGTTGAGGAACTTAATTGAATACATGTTGCAAGTCAACAAGGACACTGATGAAGAAGTTGCCCTTGAAGCCTGTGAATTCTGGTCTGCATATTGTGAGGCTGAGTTACCACCTGAGATCTTAAGAGAGTTTTTACCCCGTCTAATTCCGATTTTGCTGTCAAACATGGCTTACGCTGAGGATGATGAGTCCCTTGTTGATGCTGAGGAGGATGGCTCTGTCCCAGACCGTGATCAGGATATCAAACCACGTTTTCATTCATCGCGGTTTCATGGATCTGATGGTGCGGAAGAAGATGATGATGATATTGTCAATGTTTGGAATTTACGGAAATGCAGTGCAGCGGCCGTTGATATCCTGTCAACTGTGTTTGGGGATGAGATTCTCCCAACACTGATGGCCTTTGTTCAGGCCAAGTTGTCCAACCGTGATGATGAAACATGGAAAGAAAGGGAAGCTGCTGTTTTGGCTCTAGGTGCGGTAGCTGAAGGTTGCATTATTGGTCTTTATCCTCATTTGAATGAGATAATTGCGTATCTTATTCCTCTTTTAGACGATAAGTTTCCACTTATAAGGAGTATATCCTGTTGGACACTTTCACGTTTCAGCAAGTTCATTGTTGAGGGTGTTGGACATCAACAAGGTTATGAGCAGTTTGACAAGGTTCTTCTGGGTCTCTTAAGAAGAATATTAGATAATAACAAGCGGGTACAGGAGGCTGCTTGCTCAGCTTTTGCGACACTTGAAGAGGAGGCAGCTGATGCGTTGGGACCACGCCTGGAAACTATTTTACAACACCTTATGTGCGCGTTTGGGAAATATCAGAGACGGAACCTTAGAATTGTATATGATGCCATTGGAACTCTAGCAGATGCTGTCGGTGGAGAGTTGAATCGTCCCAATTATCTTGAAATTCTGATGCCACCATTAATTGCAAAGTGGCAACAACTTGCAAATTCAGATAAAGATCTGTTTCCGTTGCTGGAGTGCTTTACTTCTATTTCGCAGGCATTGGGTGCCGGATTCTCTCCATTTGCAGAGCCGGTGTTTCAGAGGTGCATAAGCATCATACAGTCCCAACAAGTTGCCAAGGTTGATCCGGTCGCTTCAGGAGTCCAGTATGATAAAGAATTTATTGTGTGCTCTCTTGATCTGCTTTCTGGACTTACAGAAGGTCTTGGTAGTGGGATAGAAAGTTTGGTTTCACAAAGCAATTTGAAGGACCTGCTTTTGCACTGTTGCATGGATGATGCTTCGGATGTCCGACAGAGTGGCTTTGCTTTACTTGGGGATCTTGCAAGAGTATGCCCTGTTCATTTGCGTCCTCGTTTGCCGGAATTTCTTGATGTTGCAGCCAAACAACTGAATACTCCTAAGCTGAAGGAAACTGTTTCAGTGGCAAATAATGCGTGTTGGGCCATTGGTGAGTTAGCAGTCAAGGTTCATCAAGAAATTTCTCCAATTGTTTTGACGGTCATGTCTTGCTTAGTCCCCATAATGCAGCATCCAGAGGCGCTCAACAAGTCACTAATTGAGAACAGTGCTATCACGCTTGGGAGGCTTGCATGTGTTTGTCCGGAGCTTGTGGCTCCGCATATGGAGCATTTCATGCAGCCATGGTGCATTGCTTTGTCAATGATACGTGATGATATAGAAAAGGAGGATGCATTCCGAGGTCTATGCGCATTGGTTAGAACAAATCCATCCGGAGCATTGAGTTCACTCGTATATATGTGCAATGCTATTGCCAGTTGGCATGAAATAAGGAGTGAAGAGCTACATAATGCAGTTTGCCAGGTGTTGCACGGTTATAAGCAGATGCTTGTGAATGGAGCGTGGGAACAGTGTATGTCTGCTTTGGAGCCACAAGTCAAGAACAAGCTATCAAAATACCAAGTGTAA

Protein Analysis

893

Amino Acids

99.07

Weight (kDa)

4.88

Isoelectric Point (pI)

52.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
IBN_N PF03810 40 - 106 6.8e-12 Importin-beta N-terminal domain
TPR_IPO5 PF25780 127 - 267 3.3e-06 IPO5-like, TPR repeats
HEAT_EZ PF13513 408 - 462 2.4e-14 HEAT-like repeat
TPR_IMB1 PF25574 482 - 697 4.5e-08 Importin subunit beta-1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 356, 1352, 2592
AasI GACNNNNNNGTC 1 cut(s) 2257
Acc16I TGCGCA 1 cut(s) 2464
Acc36I ACCTGC 1 cut(s) 2013
AccB1I GGYRCC 3 cut(s) 117, 347, 1796
AccI GTMKAC 1 cut(s) 338
AccII CGCG 4 cut(s) 14, 183, 1045, 1589
AccIII TCCGGA 2 cut(s) 2356, 2486
AclWI GGATC 7 cut(s) 260, 273, 322, 672, 1063, 1871, 2079
AcoI YGGCCR 3 cut(s) 9, 392, 1125
AcsI RAATTY 7 cut(s) 857, 1102, 1692, 1735, 1910, 2117, 2232
AcuI CTGAAG 5 cut(s) 659, 693, 1287, 1872, 2180
AfaI GTAC 3 cut(s) 193, 516, 1491
AfiI CCNNNNNNNGG 2 cut(s) 311, 1015
AflII CTTAAG 3 cut(s) 563, 901, 1459
AflIII ACRYGT 1 cut(s) 804
AjnI CCWGG 3 cut(s) 606, 1557, 2574
Alw21I GWGCWC 1 cut(s) 1925
Alw26I GTCTC 3 cut(s) 111, 1460, 1600
AlwI GGATC 7 cut(s) 260, 273, 322, 672, 1063, 1871, 2079
AlwNI CAGNNNCTG 1 cut(s) 1655
Ama87I CYCGRG 2 cut(s) 146, 518
Aor13HI TCCGGA 2 cut(s) 2356, 2486
AoxI GGCC 7 cut(s) 9, 43, 392, 1125, 1179, 1191, 2196
ApoI RAATTY 7 cut(s) 857, 1102, 1692, 1735, 1910, 2117, 2232
AseI ATTAAT 1 cut(s) 1709
Asp700I GAANNNNTTC 1 cut(s) 601
AspLEI GCGC 4 cut(s) 185, 1589, 2296, 2465
AspS9I GGNCC 4 cut(s) 43, 1550, 2002, 2196
AsuC2I CCSGG 3 cut(s) 519, 520, 765
AsuHPI GGTGA 3 cut(s) 309, 570, 2216
AvaI CYCGRG 2 cut(s) 146, 518
AvaII GGWCC 2 cut(s) 1550, 2002
AxyI CCTNAGG 1 cut(s) 495
BaeGI GKGCMC 1 cut(s) 22
BaeI ACNNNNGTAYC 2 cut(s) 183, 216
BamHI GGATCC 1 cut(s) 265
BanI GGYRCC 3 cut(s) 117, 347, 1796
Bbv12I GWGCWC 1 cut(s) 1925
BbvCI CCTCAGC 2 cut(s) 957, 984
BccI CCATC 6 cut(s) 384, 545, 986, 1055, 1171, 2491
BceAI ACGGC 2 cut(s) 66, 1112
BcgI CGANNNNNNTGC 2 cut(s) 2442, 2476
BciT130I CCWGG 3 cut(s) 608, 1559, 2576
BclI TGATCA 1 cut(s) 1012
BcnI CCSGG 3 cut(s) 519, 520, 765
BcoDI GTCTC 3 cut(s) 111, 1460, 1600
BfaI CTAG 3 cut(s) 555, 1253, 1646
BfmI CTRYAG 1 cut(s) 339
BfoI RGCGCY 1 cut(s) 2297
BfrI CTTAAG 3 cut(s) 563, 901, 1459
BfuAI ACCTGC 1 cut(s) 2013
BglII AGATCT 2 cut(s) 897, 1747
BlpI GCTNAGC 1 cut(s) 1507
Bme1390I CCNGG 6 cut(s) 519, 520, 608, 765, 1559, 2576
Bme18I GGWCC 2 cut(s) 1550, 2002
BmeT110I CYCGRG 2 cut(s) 146, 518
BmgT120I GGNCC 4 cut(s) 43, 1550, 2002, 2196
BmiI GGNNCC 9 cut(s) 119, 267, 349, 777, 1551, 1613, 1798, 2370, 2643
BmrFI CCNGG 6 cut(s) 519, 520, 608, 765, 1559, 2576
BplI GAGNNNNNCTC 2 cut(s) 980, 1012
BpmI CTGGAG 2 cut(s) 89, 1784
Bpu10I CCTNAGC 3 cut(s) 957, 984, 2154
Bpu1102I GCTNAGC 1 cut(s) 1507
BpuMI CCSGG 3 cut(s) 519, 520, 765
BsaAI YACGTR 1 cut(s) 2423
BsaBI GATNNNNATC 2 cut(s) 669, 1746
BsaI GGTCTC 1 cut(s) 1460
BsaWI WCCGGW 3 cut(s) 1879, 2356, 2486
BsaXI ACNNNNNCTCC 2 cut(s) 767, 797
Bsc4I CCNNNNNNNGG 2 cut(s) 311, 1015
Bse118I RCCGGY 1 cut(s) 1822
Bse1I ACTGG 3 cut(s) 574, 1897, 2529
Bse21I CCTNAGG 1 cut(s) 495
Bse3DI GCAATG 2 cut(s) 2403, 2524
Bse8I GATNNNNATC 2 cut(s) 669, 1746
BseAI TCCGGA 2 cut(s) 2356, 2486
BseBI CCWGG 3 cut(s) 608, 1559, 2576
BseJI GATNNNNATC 2 cut(s) 669, 1746
BseLI CCNNNNNNNGG 2 cut(s) 311, 1015
BseMI GCAATG 2 cut(s) 2403, 2524
BseMII CTCAG 9 cut(s) 122, 152, 509, 607, 873, 885, 948, 975, 1521
BseNI ACTGG 3 cut(s) 574, 1897, 2529
BseRI GAGGAG 3 cut(s) 393, 1001, 1544
BseSI GKGCMC 1 cut(s) 22
BseX3I CGGCCG 2 cut(s) 9, 1125
BsgI GTGCAG 3 cut(s) 753, 764, 1140
Bsh1236I CGCG 4 cut(s) 14, 183, 1045, 1589
Bsh1285I CGRYCG 3 cut(s) 12, 1128, 1884
BshFI GGCC 7 cut(s) 11, 45, 394, 1127, 1181, 1193, 2198
BshNI GGYRCC 3 cut(s) 117, 347, 1796
BsiEI CGRYCG 3 cut(s) 12, 1128, 1884
BsiHKAI GWGCWC 1 cut(s) 1925
BsiHKCI CYCGRG 2 cut(s) 146, 518
BsiSI CCGG 9 cut(s) 395, 519, 764, 1800, 1823, 1880, 2114, 2357, 2487
BslFI GGGAC 6 cut(s) 955, 986, 1563, 1662, 1840, 2255
BslI CCNNNNNNNGG 2 cut(s) 311, 1015
BsmAI GTCTC 3 cut(s) 111, 1460, 1600
BsmBI CGTCTC 1 cut(s) 1600
BsmFI GGGAC 6 cut(s) 955, 986, 1563, 1662, 1840, 2255
BsmI GAATGC 2 cut(s) 564, 2447
BsnI GGCC 7 cut(s) 11, 45, 394, 1127, 1181, 1193, 2198
Bso31I GGTCTC 1 cut(s) 1460
BsoBI CYCGRG 2 cut(s) 146, 518
Bsp1286I GDGCHC 2 cut(s) 22, 1925
Bsp13I TCCGGA 2 cut(s) 2356, 2486
Bsp1720I GCTNAGC 1 cut(s) 1507
Bsp19I CCATGG 2 cut(s) 261, 2396
BspANI GGCC 7 cut(s) 11, 45, 394, 1127, 1181, 1193, 2198
BspCNI CTCAG 9 cut(s) 121, 151, 508, 606, 874, 886, 949, 976, 1520
BspEI TCCGGA 2 cut(s) 2356, 2486
BspFNI CGCG 4 cut(s) 14, 183, 1045, 1589
BspLI GGNNCC 9 cut(s) 119, 267, 349, 777, 1551, 1613, 1798, 2370, 2643
BspMI ACCTGC 1 cut(s) 2013
BspPI GGATC 7 cut(s) 260, 273, 322, 672, 1063, 1871, 2079
BspQI GCTCTTC 1 cut(s) 2547
BspT107I GGYRCC 3 cut(s) 117, 347, 1796
BspTI CTTAAG 3 cut(s) 563, 901, 1459
BspTNI GGTCTC 1 cut(s) 1460
BsrDI GCAATG 2 cut(s) 2403, 2524
BsrFI RCCGGY 1 cut(s) 1822
BsrI ACTGG 3 cut(s) 574, 1897, 2529
BssAI RCCGGY 1 cut(s) 1822
BssT1I CCWWGG 4 cut(s) 261, 474, 1869, 2396
Bst2UI CCWGG 3 cut(s) 608, 1559, 2576
Bst6I CTCTTC 2 cut(s) 1521, 2547
BstAFI CTTAAG 3 cut(s) 563, 901, 1459
BstAPI GCANNNNNTGC 4 cut(s) 1541, 1796, 2186, 2389
BstBAI YACGTR 1 cut(s) 2423
BstC8I GCNNGC 5 cut(s) 408, 642, 1504, 1788, 2343
BstDSI CCRYGG 3 cut(s) 23, 261, 2396
BstFNI CGCG 4 cut(s) 14, 183, 1045, 1589
BstH2I RGCGCY 1 cut(s) 2297
BstHHI GCGC 4 cut(s) 185, 1589, 2296, 2465
BstMAI GTCTC 3 cut(s) 111, 1460, 1600
BstMCI CGRYCG 3 cut(s) 12, 1128, 1884
BstNI CCWGG 3 cut(s) 608, 1559, 2576
BstNSI RCATGY 2 cut(s) 808, 2349
BstSCI CCNGG 6 cut(s) 517, 518, 606, 763, 1557, 2574
BstSFI CTRYAG 1 cut(s) 339
BstSLI GKGCMC 1 cut(s) 22
BstUI CGCG 4 cut(s) 14, 183, 1045, 1589
BstX2I RGATCY 5 cut(s) 265, 897, 1055, 1747, 2071
BstYI RGATCY 5 cut(s) 265, 897, 1055, 1747, 2071
BstZI CGGCCG 2 cut(s) 9, 1125
Bsu36I CCTNAGG 1 cut(s) 495
BsuRI GGCC 7 cut(s) 11, 45, 394, 1127, 1181, 1193, 2198
BtgI CCRYGG 3 cut(s) 23, 261, 2396
BtgZI GCGATG 1 cut(s) 1026
BtsI GCAGTG 1 cut(s) 1123
BtsIMutI CAGTG 8 cut(s) 204, 825, 1123, 1172, 2014, 2181, 2326, 2630
BveI ACCTGC 1 cut(s) 2013
Cac8I GCNNGC 5 cut(s) 408, 642, 1504, 1788, 2343
CaiI CAGNNNCTG 1 cut(s) 1655
CciNI GCGGCCGC 1 cut(s) 9
CfoI GCGC 4 cut(s) 185, 1589, 2296, 2465
Cfr10I RCCGGY 1 cut(s) 1822
Cfr13I GGNCC 4 cut(s) 43, 1550, 2002, 2196
Cfr9I CCCGGG 1 cut(s) 518
CseI GACGC 1 cut(s) 2090
Csp6I GTAC 3 cut(s) 192, 515, 1490
CviQI GTAC 3 cut(s) 192, 515, 1490
DrdI GACNNNNNNGTC 1 cut(s) 2257
DseDI GACNNNNNNGTC 1 cut(s) 2257
EaeI YGGCCR 3 cut(s) 9, 392, 1125
EagI CGGCCG 2 cut(s) 9, 1125
Eam1104I CTCTTC 2 cut(s) 1521, 2547
EarI CTCTTC 2 cut(s) 1521, 2547
EclXI CGGCCG 2 cut(s) 9, 1125
Eco130I CCWWGG 4 cut(s) 261, 474, 1869, 2396
Eco31I GGTCTC 1 cut(s) 1460
Eco32I GATATC 2 cut(s) 1021, 1135
Eco47I GGWCC 2 cut(s) 1550, 2002
Eco52I CGGCCG 2 cut(s) 9, 1125
Eco57I CTGAAG 5 cut(s) 659, 693, 1287, 1872, 2180
Eco81I CCTNAGG 1 cut(s) 495
Eco88I CYCGRG 2 cut(s) 146, 518
EcoO109I RGGNCCY 2 cut(s) 43, 2002
EcoRI GAATTC 1 cut(s) 857
EcoRII CCWGG 3 cut(s) 606, 1557, 2574
EcoRV GATATC 2 cut(s) 1021, 1135
EcoT14I CCWWGG 4 cut(s) 261, 474, 1869, 2396
EcoT22I ATGCAT 3 cut(s) 253, 469, 2449
ErhI CCWWGG 4 cut(s) 261, 474, 1869, 2396
Esp3I CGTCTC 1 cut(s) 1600
FalI AAGNNNNNCTT 2 cut(s) 828, 860
FaqI GGGAC 6 cut(s) 955, 986, 1563, 1662, 1840, 2255
FauI CCCGC 2 cut(s) 211, 1479
FauNDI CATATG 1 cut(s) 2376
FbaI TGATCA 1 cut(s) 1012
FblI GTMKAC 1 cut(s) 338
FspAI RTGCGCAY 1 cut(s) 2464
FspBI CTAG 3 cut(s) 555, 1253, 1646
FspI TGCGCA 1 cut(s) 2464
GlaI GCGC 4 cut(s) 184, 1588, 2295, 2464
GsuI CTGGAG 2 cut(s) 89, 1784
HaeII RGCGCY 1 cut(s) 2297
HaeIII GGCC 7 cut(s) 11, 45, 394, 1127, 1181, 1193, 2198
HapII CCGG 9 cut(s) 395, 519, 764, 1800, 1823, 1880, 2114, 2357, 2487
HgaI GACGC 1 cut(s) 2090
HhaI GCGC 4 cut(s) 185, 1589, 2296, 2465
Hin6I GCGC 4 cut(s) 183, 1587, 2294, 2463
HinP1I GCGC 4 cut(s) 183, 1587, 2294, 2463
HincII GTYRAC 2 cut(s) 817, 1143
HindII GTYRAC 2 cut(s) 817, 1143
HindIII AAGCTT 2 cut(s) 566, 599
HinfI GANTC 7 cut(s) 205, 506, 968, 1162, 1672, 1803, 1893
HpaII CCGG 9 cut(s) 395, 519, 764, 1800, 1823, 1880, 2114, 2357, 2487
HphI GGTGA 3 cut(s) 309, 570, 2216
Hpy166II GTNNAC 4 cut(s) 339, 817, 1143, 2501
Hpy8I GTNNAC 4 cut(s) 339, 817, 1143, 2501
HpyAV CCTTC 8 cut(s) 31, 446, 560, 714, 1262, 1946, 1993, 2155
HpyCH4IV ACGT 4 cut(s) 438, 1030, 1381, 2422
HpySE526I ACGT 4 cut(s) 438, 1030, 1381, 2422
HspAI GCGC 4 cut(s) 183, 1587, 2294, 2463
Kpn2I TCCGGA 2 cut(s) 2356, 2486
Ksp22I TGATCA 1 cut(s) 1012
LguI GCTCTTC 1 cut(s) 2547
LmnI GCTCC 8 cut(s) 70, 775, 2359, 2374, 2380, 2489, 2612, 2641
MaeI CTAG 3 cut(s) 555, 1253, 1646
MaeII ACGT 4 cut(s) 438, 1030, 1381, 2422
MaeIII GTNAC 4 cut(s) 415, 576, 885, 2304
MboII GAAGA 9 cut(s) 665, 699, 845, 1082, 1085, 1439, 1476, 1538, 2564
MfeI CAATTG 1 cut(s) 2241
MflI RGATCY 5 cut(s) 265, 897, 1055, 1747, 2071
MhlI GDGCHC 2 cut(s) 22, 1925
MlyI GAGTC 2 cut(s) 977, 1902
MmeI TCCRAC 5 cut(s) 273, 1227, 1349, 1390, 2068
Mph1103I ATGCAT 3 cut(s) 253, 469, 2449
MroI TCCGGA 2 cut(s) 2356, 2486
MroXI GAANNNNTTC 1 cut(s) 601
MseI TTAA 5 cut(s) 564, 794, 902, 1460, 1709
MslI CAYNNNNRTG 1 cut(s) 1299
MspA1I CMGCKG 5 cut(s) 98, 644, 748, 1124, 1538
MspCI CTTAAG 3 cut(s) 563, 901, 1459
MspI CCGG 9 cut(s) 395, 519, 764, 1800, 1823, 1880, 2114, 2357, 2487
MspR9I CCNGG 6 cut(s) 519, 520, 608, 765, 1559, 2576
MunI CAATTG 1 cut(s) 2241
Mva1269I GAATGC 2 cut(s) 564, 2447
MvaI CCWGG 3 cut(s) 608, 1559, 2576
MvnI CGCG 4 cut(s) 14, 183, 1045, 1589
NciI CCSGG 3 cut(s) 519, 520, 765
NcoI CCATGG 2 cut(s) 261, 2396
NdeI CATATG 1 cut(s) 2376
NlaIV GGNNCC 9 cut(s) 119, 267, 349, 777, 1551, 1613, 1798, 2370, 2643
NmeAIII GCCGAG 1 cut(s) 211
NmuCI GTSAC 2 cut(s) 576, 2304
NotI GCGGCCGC 1 cut(s) 9
NsbI TGCGCA 1 cut(s) 2464
NsiI ATGCAT 3 cut(s) 253, 469, 2449
NspI RCATGY 2 cut(s) 808, 2349
PasI CCCWGGG 1 cut(s) 607
PciI ACATGT 1 cut(s) 804
PciSI GCTCTTC 1 cut(s) 2547
PctI GAATGC 2 cut(s) 564, 2447
PdmI GAANNNNTTC 1 cut(s) 601
PfeI GAWTC 5 cut(s) 205, 506, 1162, 1672, 1803
PleI GAGTC 2 cut(s) 976, 1901
PpsI GAGTC 2 cut(s) 976, 1901
Ppu21I YACGTR 1 cut(s) 2423
PpuMI RGGWCCY 1 cut(s) 2002
PscI ACATGT 1 cut(s) 804
PshBI ATTAAT 1 cut(s) 1709
PsiI TTATAA 3 cut(s) 356, 1352, 2592
Psp5II RGGWCCY 1 cut(s) 2002
Psp6I CCWGG 3 cut(s) 606, 1557, 2574
PspGI CCWGG 3 cut(s) 606, 1557, 2574
PspN4I GGNNCC 9 cut(s) 119, 267, 349, 777, 1551, 1613, 1798, 2370, 2643
PspPI GGNCC 4 cut(s) 43, 1550, 2002, 2196
PspPPI RGGWCCY 1 cut(s) 2002
PsrI GAACNNNNNNTAC 2 cut(s) 2076, 2108
PstNI CAGNNNCTG 1 cut(s) 1655
PsuI RGATCY 5 cut(s) 265, 897, 1055, 1747, 2071
PvuII CAGCTG 2 cut(s) 748, 1538
RsaI GTAC 3 cut(s) 193, 516, 1491
RsaNI GTAC 3 cut(s) 192, 515, 1490
RseI CAYNNNNRTG 1 cut(s) 1299
SapI GCTCTTC 1 cut(s) 2547
SaqAI TTAA 5 cut(s) 564, 794, 902, 1460, 1709
Sau96I GGNCC 4 cut(s) 43, 1550, 2002, 2196
SchI GAGTC 2 cut(s) 977, 1902
ScrFI CCNGG 6 cut(s) 519, 520, 608, 765, 1559, 2576
SduI GDGCHC 2 cut(s) 22, 1925
SfcI CTRYAG 1 cut(s) 339
SinI GGWCC 2 cut(s) 1550, 2002
SmaI CCCGGG 1 cut(s) 520
SmiMI CAYNNNNRTG 1 cut(s) 1299
SmlI CTYRAG 3 cut(s) 563, 901, 1459
SmoI CTYRAG 3 cut(s) 563, 901, 1459
SspI AATATT 1 cut(s) 1470
SspMI CTAG 3 cut(s) 555, 1253, 1646
StyD4I CCNGG 6 cut(s) 517, 518, 606, 763, 1557, 2574
StyI CCWWGG 4 cut(s) 261, 474, 1869, 2396
TaiI ACGT 4 cut(s) 441, 1033, 1384, 2425
TaqI TCGA 1 cut(s) 208
TauI GCSGC 6 cut(s) 8, 11, 14, 218, 647, 1127
TfiI GAWTC 5 cut(s) 205, 506, 1162, 1672, 1803
Tru1I TTAA 5 cut(s) 564, 794, 902, 1460, 1709
Tru9I TTAA 5 cut(s) 564, 794, 902, 1460, 1709
TscAI CASTG 8 cut(s) 204, 832, 1123, 1179, 2021, 2181, 2326, 2630
TseFI GTSAC 2 cut(s) 576, 2304
Tsp45I GTSAC 2 cut(s) 576, 2304
TspGWI ACGGA 3 cut(s) 1123, 1624, 1746
TspMI CCCGGG 1 cut(s) 518
TspRI CASTG 8 cut(s) 204, 832, 1123, 1179, 2021, 2181, 2326, 2630
Vha464I CTTAAG 3 cut(s) 563, 901, 1459
VpaK11BI GGWCC 2 cut(s) 1550, 2002
VspI ATTAAT 1 cut(s) 1709
XapI RAATTY 7 cut(s) 857, 1102, 1692, 1735, 1910, 2117, 2232
XceI RCATGY 2 cut(s) 808, 2349
XmaI CCCGGG 1 cut(s) 518
XmiI GTMKAC 1 cut(s) 338
XmnI GAANNNNTTC 1 cut(s) 601
XspI CTAG 3 cut(s) 555, 1253, 1646
Zsp2I ATGCAT 3 cut(s) 253, 469, 2449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.