Rw1G028360

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000066
Physical Location & Seq
Forward (+)
56042969 .. 56044630
1662 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G028360.1

Sequence Viewer

Length: 1254 bp
ATGGAACGCATGAAGACGAAGGCTGTCCAGCAGAAACTTATATTAGCTGTCTTTGCGGTTATCTTGGTTTTGCTGTTTGGAATTTGGTTGATTTGTTGTGAAATGATGAAAAGAAGAAAGGGCAGAAAACTAAATCAAAGGTGTTTTAGTCACAATGAGGGCATATTGTTACAGGACTTGACAAACCATGAGGCATATGTTGAGAGAAGAATGATAACTTTTACTTTAAAAGAACTTCAGAAGGCAACAAATAATTTCAGTCGACATGAGAAAGTTGGTGAAGGAGTTCATGGATCAGTTTACCGAGGAATACTACCAGATAAAACGGTGGTAGCCATAAAGAAGTTGAAAGTAGTTAACTCTTCCAGAATTGTTAATGAGATGATTGCTCTTTCTCAGATCAACCACAGGAATGTAGTGAGGCTCCTAGGCTGTTGTTTAGAGATCCACAAGCCTTTACTGGTTTACGAGTACTTCTCTAATGTTGGCTCTCTTTATGAGCACATATCCTATAGAAGAGAATCATTACCATTTTCATTGGAATTACGAATGAAAATTGCTGTAGAAATCGCAGCTGCACTAGCATACTTGCACTCCTCCACATCGAAGCCAGTAATCATACACCAAAATGTGAAGGCACAGAATATACTATTAGATAATAACTACATGGTCAAACTGACAGACTCTGGATTTACACCACCCCAGATTTTAATGCAGAGGACACTCGGATACTTAGACCCTGAATGCCATCGATCAAACAAGCTGACAGAAAAAAGCGATGTGTACAGCTTTGGAGTTGTCCTTGCGGAGCTAATAACTAGAAGAAGGGCAGCTTCTCCCCATAGGCCCGAGGCTGAGAGAAGCCTGGCAACTCTACTTGCTCGTGCAATGGAAGGCAGGGTCTTGTATCAAATTCTGGATGATGAAATTCTCAATGAGGGAAACATACAAATTGTTGAAAAGGTGGCGGATTTGGCAAAGAGATGCATACGGGCAAGAGGGACAGAAAGACCTTCCATGAAAGAAGTAGCCCTGGAACTCGAGGCATTGCGAATTATGGCAAAGCATCCACAGGGCATGCTTAGTTTCTATGAGTCACCCGGAAAGACTGACCACCTTGTGACACCACCTTCAGACGCTTACGTTGTTGATGTTAGATGTGAAGGCTTTGGTGGTGGTTCTAGCAGTATTAGAACAAATGCAGTAGAAATTGGATATCATAGGTTGCAAGAAGTAGATTATTATTTGACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

417

Amino Acids

47.42

Weight (kDa)

9.23

Isoelectric Point (pI)

45.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 86 - 343 2.6e-36 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 88 - 346 4.1e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 262
AciI CCGC 3 cut(s) 56, 806, 968
AclWI GGATC 2 cut(s) 301, 439
AcsI RAATTY 3 cut(s) 81, 912, 927
AcuI CTGAAG 2 cut(s) 221, 1116
AdeI CACNNNGTG 1 cut(s) 1120
AfaI GTAC 2 cut(s) 473, 785
AgsI TTSAA 2 cut(s) 349, 959
AjnI CCWGG 2 cut(s) 864, 1032
AluBI AGCT 6 cut(s) 47, 575, 763, 789, 811, 833
AluI AGCT 6 cut(s) 47, 575, 763, 789, 811, 833
Alw21I GWGCWC 1 cut(s) 504
AlwI GGATC 2 cut(s) 301, 439
AlwNI CAGNNNCTG 1 cut(s) 686
Ama87I CYCGRG 2 cut(s) 848, 1040
AoxI GGCC 1 cut(s) 845
ApeKI GCWGC 3 cut(s) 572, 575, 830
ApoI RAATTY 3 cut(s) 81, 912, 927
Asp700I GAANNNNTTC 1 cut(s) 285
AspA2I CCTAGG 1 cut(s) 427
AspS9I GGNCC 1 cut(s) 846
AsuC2I CCSGG 1 cut(s) 1101
AsuHPI GGTGA 2 cut(s) 290, 1089
AvaI CYCGRG 2 cut(s) 848, 1040
AvrII CCTAGG 1 cut(s) 427
BauI CACGAG 1 cut(s) 882
BbsI GAAGAC 1 cut(s) 20
Bbv12I GWGCWC 1 cut(s) 504
BbvI GCAGC 3 cut(s) 562, 584, 842
BccI CCATC 1 cut(s) 756
BciT130I CCWGG 2 cut(s) 866, 1034
BciVI GTATCC 1 cut(s) 722
BcnI CCSGG 1 cut(s) 1101
BfaI CTAG 4 cut(s) 428, 581, 819, 1182
BfmI CTRYAG 2 cut(s) 511, 561
BfuI GTATCC 1 cut(s) 722
BisI GCNGC 3 cut(s) 573, 576, 831
BlnI CCTAGG 1 cut(s) 427
BlsI GCNGC 3 cut(s) 574, 577, 832
BmcAI AGTACT 1 cut(s) 473
Bme1390I CCNGG 3 cut(s) 866, 1034, 1101
BmeT110I CYCGRG 2 cut(s) 848, 1040
BmgT120I GGNCC 1 cut(s) 846
BmiI GGNNCC 1 cut(s) 425
BmrFI CCNGG 3 cut(s) 866, 1034, 1101
BmsI GCATC 2 cut(s) 974, 1075
BpiI GAAGAC 1 cut(s) 20
BplI GAGNNNNNCTC 2 cut(s) 461, 493
BpuMI CCSGG 1 cut(s) 1101
Bsa29I ATCGAT 1 cut(s) 751
BsaJI CCNNGG 4 cut(s) 304, 427, 849, 1032
BsaXI ACNNNNNCTCC 2 cut(s) 578, 608
Bse1I ACTGG 2 cut(s) 465, 611
Bse3DI GCAATG 2 cut(s) 894, 1046
BseBI CCWGG 2 cut(s) 866, 1034
BseCI ATCGAT 1 cut(s) 751
BseDI CCNNGG 4 cut(s) 304, 427, 849, 1032
BseGI GGATG 2 cut(s) 925, 1066
BseMI GCAATG 2 cut(s) 894, 1046
BseMII CTCAG 2 cut(s) 410, 846
BseNI ACTGG 2 cut(s) 465, 611
BseRI GAGGAG 1 cut(s) 586
BseXI GCAGC 3 cut(s) 562, 584, 842
BsgI GTGCAG 1 cut(s) 561
BshFI GGCC 1 cut(s) 847
BshVI ATCGAT 1 cut(s) 751
BsiHKAI GWGCWC 1 cut(s) 504
BsiHKCI CYCGRG 2 cut(s) 848, 1040
BsiSI CCGG 1 cut(s) 1101
BslFI GGGAC 1 cut(s) 1015
BsmFI GGGAC 1 cut(s) 1015
BsmI GAATGC 1 cut(s) 749
BsnI GGCC 1 cut(s) 847
BsoBI CYCGRG 2 cut(s) 848, 1040
Bsp1286I GDGCHC 1 cut(s) 504
Bsp1407I TGTACA 1 cut(s) 783
Bsp143I GATC 4 cut(s) 293, 399, 444, 752
BspACI CCGC 3 cut(s) 56, 806, 968
BspANI GGCC 1 cut(s) 847
BspCNI CTCAG 2 cut(s) 409, 847
BspDI ATCGAT 1 cut(s) 751
BspLI GGNNCC 1 cut(s) 425
BspPI GGATC 2 cut(s) 301, 439
BsrDI GCAATG 2 cut(s) 894, 1046
BsrGI TGTACA 1 cut(s) 783
BsrI ACTGG 2 cut(s) 465, 611
BssECI CCNNGG 4 cut(s) 304, 427, 849, 1032
BssMI GATC 4 cut(s) 293, 399, 444, 752
BssSI CACGAG 1 cut(s) 882
BssT1I CCWWGG 1 cut(s) 427
Bst2BI CACGAG 1 cut(s) 882
Bst2UI CCWGG 2 cut(s) 866, 1034
Bst4CI ACNGT 1 cut(s) 328
Bst6I CTCTTC 2 cut(s) 367, 511
BstAUI TGTACA 1 cut(s) 783
BstC8I GCNNGC 1 cut(s) 1079
BstDEI CTNAG 4 cut(s) 396, 733, 855, 1082
BstF5I GGATG 2 cut(s) 925, 1066
BstKTI GATC 4 cut(s) 296, 402, 447, 755
BstMBI GATC 4 cut(s) 293, 399, 444, 752
BstMWI GCNNNNNNNGC 3 cut(s) 53, 581, 974
BstNI CCWGG 2 cut(s) 866, 1034
BstNSI RCATGY 1 cut(s) 1081
BstSCI CCNGG 3 cut(s) 864, 1032, 1099
BstSFI CTRYAG 2 cut(s) 511, 561
BstV1I GCAGC 3 cut(s) 562, 584, 842
BstV2I GAAGAC 1 cut(s) 20
BstX2I RGATCY 1 cut(s) 444
BstYI RGATCY 1 cut(s) 444
Bsu15I ATCGAT 1 cut(s) 751
BsuI GTATCC 1 cut(s) 722
BsuRI GGCC 1 cut(s) 847
BsuTUI ATCGAT 1 cut(s) 751
BtgZI GCGATG 1 cut(s) 792
BtsCI GGATG 2 cut(s) 925, 1066
Cac8I GCNNGC 1 cut(s) 1079
CaiI CAGNNNCTG 1 cut(s) 686
Cfr13I GGNCC 1 cut(s) 846
ClaI ATCGAT 1 cut(s) 751
CseI GACGC 1 cut(s) 1145
Csp6I GTAC 2 cut(s) 472, 784
CviAII CATG 7 cut(s) 10, 188, 266, 290, 667, 1018, 1078
CviQI GTAC 2 cut(s) 472, 784
DdeI CTNAG 4 cut(s) 396, 733, 855, 1082
DpnI GATC 4 cut(s) 295, 401, 446, 754
DpnII GATC 4 cut(s) 293, 399, 444, 752
DraI TTTAAA 1 cut(s) 228
DraIII CACNNNGTG 1 cut(s) 1120
Eam1104I CTCTTC 2 cut(s) 367, 511
EarI CTCTTC 2 cut(s) 367, 511
EciI GGCGGA 1 cut(s) 983
Eco130I CCWWGG 1 cut(s) 427
Eco32I GATATC 1 cut(s) 1217
Eco57I CTGAAG 2 cut(s) 221, 1116
Eco88I CYCGRG 2 cut(s) 848, 1040
EcoRII CCWGG 2 cut(s) 864, 1032
EcoRV GATATC 1 cut(s) 1217
EcoT14I CCWWGG 1 cut(s) 427
EcoT22I ATGCAT 1 cut(s) 989
ErhI CCWWGG 1 cut(s) 427
FaeI CATG 7 cut(s) 13, 191, 269, 293, 670, 1021, 1081
FalI AAGNNNNNCTT 2 cut(s) 817, 849
FaqI GGGAC 1 cut(s) 1015
FatI CATG 7 cut(s) 9, 187, 265, 289, 666, 1017, 1077
FauNDI CATATG 1 cut(s) 196
FblI GTMKAC 1 cut(s) 262
Fnu4HI GCNGC 3 cut(s) 573, 576, 831
FokI GGATG 2 cut(s) 932, 1053
Fsp4HI GCNGC 3 cut(s) 573, 576, 831
FspBI CTAG 4 cut(s) 428, 581, 819, 1182
GluI GCNGC 3 cut(s) 573, 576, 831
HaeIII GGCC 1 cut(s) 847
HapII CCGG 1 cut(s) 1101
HgaI GACGC 1 cut(s) 1145
Hin1II CATG 7 cut(s) 13, 191, 269, 293, 670, 1021, 1081
HincII GTYRAC 2 cut(s) 263, 358
HindII GTYRAC 2 cut(s) 263, 358
HinfI GANTC 3 cut(s) 521, 683, 1094
HpaI GTTAAC 1 cut(s) 358
HpaII CCGG 1 cut(s) 1101
HphI GGTGA 2 cut(s) 290, 1089
Hpy166II GTNNAC 5 cut(s) 263, 301, 358, 466, 784
Hpy188I TCNGA 4 cut(s) 240, 399, 728, 1135
Hpy188III TCNNGA 3 cut(s) 366, 687, 917
Hpy8I GTNNAC 5 cut(s) 263, 301, 358, 466, 784
HpyAV CCTTC 9 cut(s) 13, 235, 275, 628, 819, 887, 1023, 1140, 1157
HpyCH4III ACNGT 1 cut(s) 328
HpyCH4IV ACGT 1 cut(s) 1143
HpyCH4V TGCA 7 cut(s) 578, 592, 715, 887, 987, 1202, 1228
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 581, 974
HpyF3I CTNAG 4 cut(s) 396, 733, 855, 1082
HpySE526I ACGT 1 cut(s) 1143
Hsp92II CATG 7 cut(s) 13, 191, 269, 293, 670, 1021, 1081
KspAI GTTAAC 1 cut(s) 358
Kzo9I GATC 4 cut(s) 293, 399, 444, 752
LmnI GCTCC 2 cut(s) 429, 808
Lsp1109I GCAGC 3 cut(s) 562, 584, 842
LweI GCATC 2 cut(s) 974, 1075
MaeI CTAG 4 cut(s) 428, 581, 819, 1182
MaeII ACGT 1 cut(s) 1143
MaeIII GTNAC 4 cut(s) 149, 168, 1095, 1120
MalI GATC 4 cut(s) 295, 401, 446, 754
MboI GATC 4 cut(s) 293, 399, 444, 752
MboII GAAGA 6 cut(s) 25, 126, 219, 354, 528, 834
MflI RGATCY 1 cut(s) 444
MhlI GDGCHC 1 cut(s) 504
MlyI GAGTC 2 cut(s) 677, 1103
Mph1103I ATGCAT 1 cut(s) 989
MroXI GAANNNNTTC 1 cut(s) 285
MseI TTAA 4 cut(s) 227, 357, 375, 710
MslI CAYNNNNRTG 2 cut(s) 411, 627
MspA1I CMGCKG 1 cut(s) 575
MspI CCGG 1 cut(s) 1101
MspR9I CCNGG 3 cut(s) 866, 1034, 1101
Mva1269I GAATGC 1 cut(s) 749
MvaI CCWGG 2 cut(s) 866, 1034
MwoI GCNNNNNNNGC 3 cut(s) 53, 581, 974
NciI CCSGG 1 cut(s) 1101
NdeI CATATG 1 cut(s) 196
NdeII GATC 4 cut(s) 293, 399, 444, 752
NlaIII CATG 7 cut(s) 13, 191, 269, 293, 670, 1021, 1081
NlaIV GGNNCC 1 cut(s) 425
NmuCI GTSAC 3 cut(s) 149, 1095, 1120
NsiI ATGCAT 1 cut(s) 989
NspI RCATGY 1 cut(s) 1081
PaeI GCATGC 1 cut(s) 1081
PaeR7I CTCGAG 1 cut(s) 1040
PctI GAATGC 1 cut(s) 749
PdmI GAANNNNTTC 1 cut(s) 285
PfeI GAWTC 1 cut(s) 521
PkrI GCNGC 3 cut(s) 574, 577, 832
PleI GAGTC 2 cut(s) 677, 1102
PpsI GAGTC 2 cut(s) 677, 1102
Psp6I CCWGG 2 cut(s) 864, 1032
PspGI CCWGG 2 cut(s) 864, 1032
PspN4I GGNNCC 1 cut(s) 425
PspPI GGNCC 1 cut(s) 846
PspXI VCTCGAGB 1 cut(s) 1040
PstNI CAGNNNCTG 1 cut(s) 686
PsuI RGATCY 1 cut(s) 444
PvuII CAGCTG 1 cut(s) 575
RsaI GTAC 2 cut(s) 473, 785
RsaNI GTAC 2 cut(s) 472, 784
RseI CAYNNNNRTG 2 cut(s) 411, 627
SalI GTCGAC 1 cut(s) 261
SaqAI TTAA 4 cut(s) 227, 357, 375, 710
SatI GCNGC 3 cut(s) 573, 576, 831
Sau3AI GATC 4 cut(s) 293, 399, 444, 752
Sau96I GGNCC 1 cut(s) 846
ScaI AGTACT 1 cut(s) 473
SchI GAGTC 2 cut(s) 677, 1103
ScrFI CCNGG 3 cut(s) 866, 1034, 1101
SduI GDGCHC 1 cut(s) 504
SfaNI GCATC 2 cut(s) 974, 1075
SfcI CTRYAG 2 cut(s) 511, 561
Sfr274I CTCGAG 1 cut(s) 1040
SlaI CTCGAG 1 cut(s) 1040
SmiMI CAYNNNNRTG 2 cut(s) 411, 627
SmlI CTYRAG 1 cut(s) 1040
SmoI CTYRAG 1 cut(s) 1040
SphI GCATGC 1 cut(s) 1081
SsiI CCGC 3 cut(s) 56, 806, 968
SspMI CTAG 4 cut(s) 428, 581, 819, 1182
StyD4I CCNGG 3 cut(s) 864, 1032, 1099
StyI CCWWGG 1 cut(s) 427
TaaI ACNGT 1 cut(s) 328
TaiI ACGT 1 cut(s) 1146
TaqI TCGA 4 cut(s) 262, 605, 751, 1041
TatI WGTACW 2 cut(s) 471, 783
TfiI GAWTC 1 cut(s) 521
Tru1I TTAA 4 cut(s) 227, 357, 375, 710
Tru9I TTAA 4 cut(s) 227, 357, 375, 710
TseFI GTSAC 3 cut(s) 149, 1095, 1120
TseI GCWGC 3 cut(s) 572, 575, 830
Tsp45I GTSAC 3 cut(s) 149, 1095, 1120
TspDTI ATGAA 7 cut(s) 26, 122, 278, 525, 566, 939, 1034
XapI RAATTY 3 cut(s) 81, 912, 927
XceI RCATGY 1 cut(s) 1081
XhoI CTCGAG 1 cut(s) 1040
XmaJI CCTAGG 1 cut(s) 427
XmiI GTMKAC 1 cut(s) 262
XmnI GAANNNNTTC 1 cut(s) 285
XspI CTAG 4 cut(s) 428, 581, 819, 1182
ZrmI AGTACT 1 cut(s) 473
Zsp2I ATGCAT 1 cut(s) 989
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.