FvH4_3g10470

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000066
Physical Location & Seq
Reverse (-)
6149254 .. 6152706
3453 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10470.t1

Sequence Viewer

Length: 1839 bp
ATGGGTGAAGATTGCTTAAAAGAAATTCTTGATGATGCCATAGTGAATGAGGGAAACATTGAGACAGCAGTAAACGTGGCCGATCTCGCAAAAAGATGTTTGAGGTTAAAAGGGGAGGAAAGGCCTACCATGAAAGAAGTCGCCATAGAGCTAGAGGGACTGGCAATTATGGCAAAGCATCTGTGGGGAAAGAATGCTAAATTCTGTCCGGAGGAGAATGAGTACCTGCTTGGTTCACCTACTTCAGACAGTTATGACATGGATGCTAGAAGAGGTGATCACAATTCTAGTGGTTTAACCATTGGTACGACTACAGTGTATGACAGCATGCAAATCCAGATGTTGATTCCACATGGCATATTCCTCTGGATTAATTGGCTAAACAAAGTTTATCATTCTAGCAATAGTGAGGACTTACAGATATCAAGTAATAGGCAGTTGAACTGGGAGCACATACTGGAATCAGACAAGTATCATTTTCAGCTTCTTGGTAATGCTGGTTGGAATTTCATGGATGTATTGGGTAGTGAAGAAAAGGAAGTTCATCAAATTCAAGGAGAAGTACTTCAAAGAAAATGGTGGCTTACTGTTACAGCAACAACTTGCTACTCAGGTGTAAGTATAGGCTTGTTGGTTATATTTGTGGGAATTTCATGGATATGTTGCGGAATAAAGAGAAGACAATACACTAAACTCAAAGAAAGGTATTTCAAAGAGAATGGTGGCTTATTGTTACTACAACAACTCGCTAGTCATGGAGGCACTGTGGAGACAACAAAAATCTTTTCCACAGAAGAACTTGAGAAGGCAACAAACAATTACCACGAGAGTAGAGTCCTCGGAGAAGGAGGCTATGGAACAGTTTACAAAGGAATTCTACCAGATGACAAAGTGGTGGCGATAAAGAAGTCGAAAGGTGGTGCCCCGACCCAAAGTGATCAGTTTGTTAACGAGGTGATTGTTCTATCCCAAATAAACCACAGAAATGTGGTGAAGCTACTTGGTTGTTGTTTAGAGACAGAAGTGCCTTTACTAGTATATGAGTTCATCACCAATGGTACTCTTTACGAGCACATTCATAAAAAAAGATCATCACTGTCATTTGAACTACGAATGAGGATAGCAGTTGAAACGTCAGAAGCATTAGCATACTTGCACTCCTCAACTTCAAATCCAATCATACATAGAGATGTGAAAGCAGAAAATATTCTGCTAGATGATAGTTATACGGCGAAAGTGTCAGACTTCGGAGCTTCAAGATTGGTTCCATCAGGTCAAACTGAAATACAAACTCTAGTGCTTGGGACCTTCGGTTACCTAGACCCAGAATATCTGCAATCTAACCAACTAACAGAAAAAAGTGACGTCTACAGCTTTGATGTTGTCCTAGTGGAGCTACTAACAAGCATAGTGGCACTATCCAAGGGCAAATGCTTAACAAGCATCTTTCTTTCTTCCATGGGTGAAGGTCGCTTGAATCAAATTCTTGATGATGACATTGTGAATGAGGGAAACATTGAGACAATAAAGAAAGTGGCTAATCTTTCAGAAAGATGCTTGAGGGTAAAAGGGGAGGAAAGGCCTACCATGAAAGAAGTAGCAATGGAGCTAGAGAGAATGAGGATTACATCAAAGCATCCATGGGGAACTAAAGTTGATTTCTGTCCCGAAGAAAATGAGTACCTGCTTGGGTCACTTGATTCAGATGCTTATGTTTTGGATGTTACAGGAGGTAATGGTAGTTCTAGTGGTTTTACAACCGGTACAACCTCAGGGTATGACAGTATGCAAATACAAATGTTAATGCCATATGGTTATGGTTCCGGTGACGGAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

613

Amino Acids

68.35

Weight (kDa)

5.19

Isoelectric Point (pI)

37.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 274 - 533 6e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 277 - 537 7.1e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1368
Acc36I ACCTGC 2 cut(s) 234, 1692
AccB1I GGYRCC 1 cut(s) 920
AccI GTMKAC 1 cut(s) 1368
AccIII TCCGGA 1 cut(s) 208
AciI CCGC 1 cut(s) 666
AcoI YGGCCR 1 cut(s) 78
AcsI RAATTY 7 cut(s) 24, 200, 505, 549, 648, 873, 1482
AcuI CTGAAG 1 cut(s) 228
AcyI GRCGYC 1 cut(s) 1365
AfaI GTAC 6 cut(s) 224, 307, 564, 1060, 1682, 1765
AgeI ACCGGT 1 cut(s) 1760
AgsI TTSAA 9 cut(s) 442, 554, 569, 712, 1106, 1130, 1170, 1257, 1477
AhlI ACTAGT 1 cut(s) 1033
AluBI AGCT 7 cut(s) 151, 484, 997, 1253, 1374, 1396, 1609
AluI AGCT 7 cut(s) 151, 484, 997, 1253, 1374, 1396, 1609
Alw21I GWGCWC 2 cut(s) 453, 1074
Alw26I GTCTC 4 cut(s) 56, 764, 1010, 1514
Aor13HI TCCGGA 1 cut(s) 208
AoxI GGCC 3 cut(s) 78, 122, 1580
ApoI RAATTY 7 cut(s) 24, 200, 505, 549, 648, 873, 1482
AseI ATTAAT 1 cut(s) 372
AsiGI ACCGGT 1 cut(s) 1760
Asp700I GAANNNNTTC 2 cut(s) 564, 1206
AspS9I GGNCC 1 cut(s) 1305
AsuHPI GGTGA 8 cut(s) 17, 228, 287, 967, 1003, 1042, 1475, 1838
AvaII GGWCC 1 cut(s) 1305
AxyI CCTNAGG 1 cut(s) 1771
BaeGI GKGCMC 1 cut(s) 925
BanI GGYRCC 1 cut(s) 920
BarI GAAGNNNNNNTAC 2 cut(s) 1014, 1046
BauI CACGAG 1 cut(s) 824
BbsI GAAGAC 1 cut(s) 685
Bbv12I GWGCWC 2 cut(s) 453, 1074
BccI CCATC 1 cut(s) 1276
BceAI ACGGC 1 cut(s) 1245
BclI TGATCA 2 cut(s) 277, 937
BcoDI GTCTC 4 cut(s) 56, 764, 1010, 1514
BcuI ACTAGT 1 cut(s) 1033
BfmI CTRYAG 2 cut(s) 312, 1369
BfuAI ACCTGC 2 cut(s) 234, 1692
BmcAI AGTACT 1 cut(s) 564
Bme18I GGWCC 1 cut(s) 1305
BmgT120I GGNCC 1 cut(s) 1305
BmiI GGNNCC 4 cut(s) 922, 1266, 1306, 1822
BmrI ACTGGG 1 cut(s) 454
BmsI GCATC 7 cut(s) 25, 187, 253, 1452, 1544, 1645, 1696
BmuI ACTGGG 1 cut(s) 454
BpiI GAAGAC 1 cut(s) 685
BpuEI CTTGAG 2 cut(s) 821, 1579
BsaHI GRCGYC 1 cut(s) 1365
BsaJI CCNNGG 4 cut(s) 838, 1422, 1458, 1640
BsaWI WCCGGW 3 cut(s) 208, 1760, 1823
BsaXI ACNNNNNCTCC 6 cut(s) 206, 236, 750, 780, 1142, 1172
Bse118I RCCGGY 1 cut(s) 1760
Bse1I ACTGG 3 cut(s) 165, 449, 462
Bse21I CCTNAGG 1 cut(s) 1771
Bse3DI GCAATG 1 cut(s) 1608
BseAI TCCGGA 1 cut(s) 208
BseDI CCNNGG 4 cut(s) 838, 1422, 1458, 1640
BseGI GGATG 4 cut(s) 268, 520, 1636, 1726
BseMI GCAATG 1 cut(s) 1608
BseMII CTCAG 2 cut(s) 624, 1785
BseNI ACTGG 3 cut(s) 165, 449, 462
BseRI GAGGAG 2 cut(s) 227, 1150
BseSI GKGCMC 1 cut(s) 925
BshFI GGCC 3 cut(s) 80, 124, 1582
BshNI GGYRCC 1 cut(s) 920
BshTI ACCGGT 1 cut(s) 1760
BsiHKAI GWGCWC 2 cut(s) 453, 1074
BsiSI CCGG 3 cut(s) 209, 1761, 1824
BslFI GGGAC 3 cut(s) 171, 1318, 1650
BsmAI GTCTC 4 cut(s) 56, 764, 1010, 1514
BsmFI GGGAC 3 cut(s) 171, 1318, 1650
BsmI GAATGC 1 cut(s) 199
BsnI GGCC 3 cut(s) 80, 124, 1582
Bsp1286I GDGCHC 3 cut(s) 453, 925, 1074
Bsp13I TCCGGA 1 cut(s) 208
Bsp143I GATC 4 cut(s) 82, 277, 937, 1088
Bsp19I CCATGG 2 cut(s) 1458, 1640
BspACI CCGC 1 cut(s) 666
BspANI GGCC 3 cut(s) 80, 124, 1582
BspCNI CTCAG 2 cut(s) 623, 1784
BspEI TCCGGA 1 cut(s) 208
BspLI GGNNCC 4 cut(s) 922, 1266, 1306, 1822
BspMI ACCTGC 2 cut(s) 234, 1692
BspT107I GGYRCC 1 cut(s) 920
BsrDI GCAATG 1 cut(s) 1608
BsrFI RCCGGY 1 cut(s) 1760
BsrI ACTGG 3 cut(s) 165, 449, 462
BssAI RCCGGY 1 cut(s) 1760
BssECI CCNNGG 4 cut(s) 838, 1422, 1458, 1640
BssMI GATC 4 cut(s) 82, 277, 937, 1088
BssNI GRCGYC 1 cut(s) 1365
BssSI CACGAG 1 cut(s) 824
BssT1I CCWWGG 3 cut(s) 1422, 1458, 1640
Bst2BI CACGAG 1 cut(s) 824
Bst4CI ACNGT 7 cut(s) 251, 316, 589, 766, 862, 1098, 1784
Bst6I CTCTTC 1 cut(s) 265
BstACI GRCGYC 1 cut(s) 1365
BstC8I GCNNGC 1 cut(s) 329
BstDEI CTNAG 2 cut(s) 610, 1771
BstDSI CCRYGG 2 cut(s) 1458, 1640
BstEII GGTNACC 1 cut(s) 1313
BstF5I GGATG 4 cut(s) 268, 520, 1636, 1726
BstKTI GATC 4 cut(s) 85, 280, 940, 1091
BstMAI GTCTC 4 cut(s) 56, 764, 1010, 1514
BstMBI GATC 4 cut(s) 82, 277, 937, 1088
BstMWI GCNNNNNNNGC 3 cut(s) 86, 170, 1440
BstNSI RCATGY 1 cut(s) 331
BstPI GGTNACC 1 cut(s) 1313
BstSFI CTRYAG 2 cut(s) 312, 1369
BstSLI GKGCMC 1 cut(s) 925
BstV2I GAAGAC 1 cut(s) 685
Bsu36I CCTNAGG 1 cut(s) 1771
BsuRI GGCC 3 cut(s) 80, 124, 1582
BtgI CCRYGG 2 cut(s) 1458, 1640
BtsCI GGATG 4 cut(s) 268, 520, 1636, 1726
BtsIMutI CAGTG 3 cut(s) 321, 762, 1094
BveI ACCTGC 2 cut(s) 234, 1692
Cac8I GCNNGC 1 cut(s) 329
Cfr10I RCCGGY 1 cut(s) 1760
Cfr13I GGNCC 1 cut(s) 1305
Csp6I GTAC 6 cut(s) 223, 306, 563, 1059, 1681, 1764
CspAI ACCGGT 1 cut(s) 1760
CspCI CAANNNNNGTGG 4 cut(s) 271, 306, 1392, 1427
CviQI GTAC 6 cut(s) 223, 306, 563, 1059, 1681, 1764
DdeI CTNAG 2 cut(s) 610, 1771
DpnI GATC 4 cut(s) 84, 279, 939, 1090
DpnII GATC 4 cut(s) 82, 277, 937, 1088
EaeI YGGCCR 1 cut(s) 78
Eam1104I CTCTTC 1 cut(s) 265
EarI CTCTTC 1 cut(s) 265
Eco130I CCWWGG 3 cut(s) 1422, 1458, 1640
Eco147I AGGCCT 2 cut(s) 124, 1582
Eco32I GATATC 1 cut(s) 423
Eco47I GGWCC 1 cut(s) 1305
Eco57I CTGAAG 1 cut(s) 228
Eco81I CCTNAGG 1 cut(s) 1771
Eco91I GGTNACC 1 cut(s) 1313
EcoO109I RGGNCCY 1 cut(s) 1305
EcoO65I GGTNACC 1 cut(s) 1313
EcoRI GAATTC 1 cut(s) 873
EcoRV GATATC 1 cut(s) 423
EcoT14I CCWWGG 3 cut(s) 1422, 1458, 1640
ErhI CCWWGG 3 cut(s) 1422, 1458, 1640
FalI AAGNNNNNCTT 2 cut(s) 12, 44
FaqI GGGAC 3 cut(s) 171, 1318, 1650
FauNDI CATATG 1 cut(s) 1810
FbaI TGATCA 2 cut(s) 277, 937
FblI GTMKAC 1 cut(s) 1368
FokI GGATG 4 cut(s) 275, 527, 1623, 1733
HaeIII GGCC 3 cut(s) 80, 124, 1582
HapII CCGG 3 cut(s) 209, 1761, 1824
Hin1I GRCGYC 1 cut(s) 1365
HincII GTYRAC 1 cut(s) 949
HindII GTYRAC 1 cut(s) 949
HinfI GANTC 5 cut(s) 346, 461, 834, 1477, 1700
HpaI GTTAAC 1 cut(s) 949
HpaII CCGG 3 cut(s) 209, 1761, 1824
HphI GGTGA 8 cut(s) 17, 228, 287, 967, 1003, 1042, 1475, 1838
Hpy166II GTNNAC 5 cut(s) 73, 236, 865, 949, 1369
Hpy188I TCNGA 8 cut(s) 247, 466, 842, 1138, 1243, 1250, 1549, 1705
Hpy188III TCNNGA 7 cut(s) 29, 209, 337, 367, 1257, 1487, 1667
Hpy8I GTNNAC 5 cut(s) 73, 236, 865, 949, 1369
HpyAV CCTTC 4 cut(s) 799, 839, 1318, 1460
HpyCH4III ACNGT 7 cut(s) 251, 316, 589, 766, 862, 1098, 1784
HpyCH4IV ACGT 3 cut(s) 75, 1133, 1365
HpyCH4V TGCA 4 cut(s) 331, 1156, 1336, 1789
HpyF10VI GCNNNNNNNGC 3 cut(s) 86, 170, 1440
HpyF3I CTNAG 2 cut(s) 610, 1771
HpySE526I ACGT 3 cut(s) 75, 1133, 1365
Hsp92I GRCGYC 1 cut(s) 1365
Kpn2I TCCGGA 1 cut(s) 208
Ksp22I TGATCA 2 cut(s) 277, 937
KspAI GTTAAC 1 cut(s) 949
Kzo9I GATC 4 cut(s) 82, 277, 937, 1088
LmnI GCTCC 4 cut(s) 448, 1250, 1393, 1606
LweI GCATC 7 cut(s) 25, 187, 253, 1452, 1544, 1645, 1696
MaeII ACGT 3 cut(s) 75, 1133, 1365
MaeIII GTNAC 7 cut(s) 589, 732, 1313, 1361, 1692, 1723, 1826
MalI GATC 4 cut(s) 84, 279, 939, 1090
MboI GATC 4 cut(s) 82, 277, 937, 1088
MboII GAAGA 7 cut(s) 20, 282, 542, 690, 806, 1446, 1682
MhlI GDGCHC 3 cut(s) 453, 925, 1074
MlyI GAGTC 1 cut(s) 843
MmeI TCCRAC 1 cut(s) 482
MroI TCCGGA 1 cut(s) 208
MroXI GAANNNNTTC 2 cut(s) 564, 1206
MseI TTAA 7 cut(s) 17, 107, 296, 372, 948, 1436, 1802
MslI CAYNNNNRTG 3 cut(s) 658, 984, 1188
MspI CCGG 3 cut(s) 209, 1761, 1824
Mva1269I GAATGC 1 cut(s) 199
MwoI GCNNNNNNNGC 3 cut(s) 86, 170, 1440
NcoI CCATGG 2 cut(s) 1458, 1640
NdeI CATATG 1 cut(s) 1810
NdeII GATC 4 cut(s) 82, 277, 937, 1088
NlaIV GGNNCC 4 cut(s) 922, 1266, 1306, 1822
NmuCI GTSAC 3 cut(s) 1361, 1692, 1826
NspI RCATGY 1 cut(s) 331
PaeI GCATGC 1 cut(s) 331
PceI AGGCCT 2 cut(s) 124, 1582
PctI GAATGC 1 cut(s) 199
PdmI GAANNNNTTC 2 cut(s) 564, 1206
PfeI GAWTC 4 cut(s) 346, 461, 1477, 1700
PinAI ACCGGT 1 cut(s) 1760
PleI GAGTC 1 cut(s) 842
PpsI GAGTC 1 cut(s) 842
PpuMI RGGWCCY 1 cut(s) 1305
PshBI ATTAAT 1 cut(s) 372
Psp5II RGGWCCY 1 cut(s) 1305
PspEI GGTNACC 1 cut(s) 1313
PspN4I GGNNCC 4 cut(s) 922, 1266, 1306, 1822
PspPI GGNCC 1 cut(s) 1305
PspPPI RGGWCCY 1 cut(s) 1305
PsrI GAACNNNNNNTAC 2 cut(s) 1726, 1758
RsaI GTAC 6 cut(s) 224, 307, 564, 1060, 1682, 1765
RsaNI GTAC 6 cut(s) 223, 306, 563, 1059, 1681, 1764
RseI CAYNNNNRTG 3 cut(s) 658, 984, 1188
SaqAI TTAA 7 cut(s) 17, 107, 296, 372, 948, 1436, 1802
Sau3AI GATC 4 cut(s) 82, 277, 937, 1088
Sau96I GGNCC 1 cut(s) 1305
ScaI AGTACT 1 cut(s) 564
SchI GAGTC 1 cut(s) 843
SduI GDGCHC 3 cut(s) 453, 925, 1074
SfaNI GCATC 7 cut(s) 25, 187, 253, 1452, 1544, 1645, 1696
SfcI CTRYAG 2 cut(s) 312, 1369
SinI GGWCC 1 cut(s) 1305
SmiMI CAYNNNNRTG 3 cut(s) 658, 984, 1188
SmlI CTYRAG 2 cut(s) 800, 1558
SmoI CTYRAG 2 cut(s) 800, 1558
SpeI ACTAGT 1 cut(s) 1033
SphI GCATGC 1 cut(s) 331
SseBI AGGCCT 2 cut(s) 124, 1582
SsiI CCGC 1 cut(s) 666
SspI AATATT 1 cut(s) 1207
StuI AGGCCT 2 cut(s) 124, 1582
StyI CCWWGG 3 cut(s) 1422, 1458, 1640
TaaI ACNGT 7 cut(s) 251, 316, 589, 766, 862, 1098, 1784
TaiI ACGT 3 cut(s) 78, 1136, 1368
TaqI TCGA 1 cut(s) 911
TatI WGTACW 1 cut(s) 562
TfiI GAWTC 4 cut(s) 346, 461, 1477, 1700
Tru1I TTAA 7 cut(s) 17, 107, 296, 372, 948, 1436, 1802
Tru9I TTAA 7 cut(s) 17, 107, 296, 372, 948, 1436, 1802
TscAI CASTG 3 cut(s) 321, 769, 1101
TseFI GTSAC 3 cut(s) 1361, 1692, 1826
Tsp45I GTSAC 3 cut(s) 1361, 1692, 1826
TspDTI ATGAA 7 cut(s) 146, 499, 533, 642, 1036, 1067, 1604
TspRI CASTG 3 cut(s) 321, 769, 1101
VpaK11BI GGWCC 1 cut(s) 1305
VspI ATTAAT 1 cut(s) 372
XapI RAATTY 7 cut(s) 24, 200, 505, 549, 648, 873, 1482
XceI RCATGY 1 cut(s) 331
XmiI GTMKAC 1 cut(s) 1368
XmnI GAANNNNTTC 2 cut(s) 564, 1206
ZraI GACGTC 1 cut(s) 1366
ZrmI AGTACT 1 cut(s) 564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.