Rmu_sc0000563.1_g000024
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000563.1
OG0000066
Physical Location & Seq
Reverse (-)
108555 .. 109879
1325 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000563.1_g000024.1.cds

Sequence Viewer

Length: 1245 bp
atgaattgttccgacggtgtctctctgagcttcttaggagtattgcttgtaacattttggatatacttcggactgaagagaagaaagttcaagatactcaaagagaagtacttcaaacacaatggtggcttcttgttacaacaaaaattggagaatttcgatggacctcaagcagccaaaatatttactagagaagaacttaagaaggccacaaacaactttcatgacagtttaaaaattggtgaaggaggctatggatttgtttacaaaggaactctatcaaatggaaatgaggttgccataaaggtgtcaaaaagtagtgccccaatgacccaaagtaatcagttcattaatgaggtgattgttctttctcagatcaaccacagaaatgtggtgaagcttctaggttgttgtttggagacccaaacgcctttattagtgtatgagtttgtcagcaacggcacactttatgagcatattcataaaaagaatggcaagggaccgctttcctttgggctacgaatgaagatagcaacagaaacagcaggatcactagcatacttgcactactctacttcgatgcaaattgtgcaccgagatgtgaaggcagcaaacattctactggatgagaatttcacagcgaaagtgtcagactttggagcttcaaaattggttcccgaagatcaaaatcaactgtctactttagtgcaagggacgatagggtacttggaccctgaatatcttcagtcaaacacactgacagagaaaagtgacgtatatagcttcggcgttgtccttgtggagctaataacaagtcaagtggcaatttcttatcagaagcctgaggcggagagaagcttagcaaaattttttgttacttctgtggaagagaatcgcctagatcagattctcgatcatgaaataatcaaagaggggagcttcgaaacagctgaacaagtagcccatctggccaaaagttgtttaagtttgaaagggagcgataggcctaccatgaaagaagtagcaatgaagctagaggaagtattgcaagttatggcaaagcatccatggggaaaggctgatgcctcaccaaaagagactgattacttgcagcttgcgtcacattcaaaagcctacgttgttgatgttagaggtgatgaaggtgaagttataaccagtattgactacgaccggagcatccagattcaacccctgatgatgaagccttatgatggaggccgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

414

Amino Acids

46.29

Weight (kDa)

6.61

Isoelectric Point (pI)

25.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1172
AccI GTMKAC 1 cut(s) 698
AciI CCGC 2 cut(s) 503, 848
AclWI GGATC 1 cut(s) 556
AcoI YGGCCR 1 cut(s) 969
AcsI RAATTY 3 cut(s) 154, 631, 866
AcuI CTGAAG 2 cut(s) 95, 728
AfaI GTAC 2 cut(s) 110, 725
AfiI CCNNNNNNNGG 1 cut(s) 1232
AflII CTTAAG 1 cut(s) 200
AgsI TTSAA 6 cut(s) 91, 115, 666, 991, 1128, 1208
AleI CACNNNNGTG 1 cut(s) 123
Alw21I GWGCWC 1 cut(s) 594
Alw26I GTCTC 3 cut(s) 25, 413, 1091
Alw44I GTGCAC 1 cut(s) 590
AlwI GGATC 1 cut(s) 556
AoxI GGCC 4 cut(s) 207, 969, 1004, 1237
ApaLI GTGCAC 1 cut(s) 590
ApeKI GCWGC 3 cut(s) 173, 608, 1111
ApoI RAATTY 3 cut(s) 154, 631, 866
AseI ATTAAT 1 cut(s) 351
Asp700I GAANNNNTTC 2 cut(s) 110, 741
AspS9I GGNCC 3 cut(s) 164, 500, 730
AsuHPI GGTGA 6 cut(s) 254, 370, 406, 1080, 1166, 1175
AsuII TTCGAA 1 cut(s) 942
AvaII GGWCC 3 cut(s) 164, 500, 730
AxyI CCTNAGG 1 cut(s) 843
BaeGI GKGCMC 2 cut(s) 325, 594
BalI TGGCCA 1 cut(s) 971
Bbv12I GWGCWC 1 cut(s) 594
BbvI GCAGC 3 cut(s) 185, 620, 1123
BccI CCATC 3 cut(s) 155, 972, 1226
BceAI ACGGC 1 cut(s) 475
BcoDI GTCTC 3 cut(s) 25, 413, 1091
BfaI CTAG 5 cut(s) 189, 404, 554, 899, 1034
BfrI CTTAAG 1 cut(s) 200
BglI GCCNNNNNGGC 1 cut(s) 968
BisI GCNGC 3 cut(s) 174, 609, 1112
BlpI GCTNAGC 1 cut(s) 859
BlsI GCNGC 3 cut(s) 175, 610, 1113
BmcAI AGTACT 1 cut(s) 110
Bme18I GGWCC 3 cut(s) 164, 500, 730
BmgT120I GGNCC 3 cut(s) 164, 500, 730
BmiI GGNNCC 3 cut(s) 501, 675, 732
BmsI GCATC 4 cut(s) 570, 1072, 1072, 1206
Bpu1102I GCTNAGC 1 cut(s) 859
Bpu14I TTCGAA 1 cut(s) 942
BpuEI CTTGAG 1 cut(s) 153
BsaBI GATNNNNATC 1 cut(s) 687
BsaI GGTCTC 1 cut(s) 413
BsaJI CCNNGG 1 cut(s) 1067
BsaWI WCCGGW 1 cut(s) 1191
Bsc4I CCNNNNNNNGG 1 cut(s) 1232
Bse1I ACTGG 2 cut(s) 627, 1176
Bse21I CCTNAGG 1 cut(s) 843
Bse3DI GCAATG 1 cut(s) 1032
Bse8I GATNNNNATC 1 cut(s) 687
BseDI CCNNGG 1 cut(s) 1067
BseGI GGATG 3 cut(s) 631, 1063, 1197
BseJI GATNNNNATC 1 cut(s) 687
BseLI CCNNNNNNNGG 1 cut(s) 1232
BseMI GCAATG 1 cut(s) 1032
BseMII CTCAG 3 cut(s) 17, 386, 834
BseNI ACTGG 2 cut(s) 627, 1176
BseSI GKGCMC 2 cut(s) 325, 594
BseXI GCAGC 3 cut(s) 185, 620, 1123
Bsh1285I CGRYCG 1 cut(s) 1192
BshFI GGCC 4 cut(s) 209, 971, 1006, 1239
BsiEI CGRYCG 1 cut(s) 1192
BsiHKAI GWGCWC 1 cut(s) 594
BsiSI CCGG 1 cut(s) 1192
BslFI GGGAC 2 cut(s) 513, 727
BslI CCNNNNNNNGG 1 cut(s) 1232
BsmAI GTCTC 3 cut(s) 25, 413, 1091
BsmFI GGGAC 2 cut(s) 513, 727
BsnI GGCC 4 cut(s) 209, 971, 1006, 1239
Bso31I GGTCTC 1 cut(s) 413
Bsp119I TTCGAA 1 cut(s) 942
Bsp1286I GDGCHC 2 cut(s) 325, 594
Bsp143I GATC 5 cut(s) 375, 548, 682, 901, 913
Bsp1720I GCTNAGC 1 cut(s) 859
Bsp19I CCATGG 1 cut(s) 1067
BspACI CCGC 2 cut(s) 503, 848
BspANI GGCC 4 cut(s) 209, 971, 1006, 1239
BspCNI CTCAG 3 cut(s) 18, 385, 835
BspHI TCATGA 2 cut(s) 223, 916
BspLI GGNNCC 3 cut(s) 501, 675, 732
BspPI GGATC 1 cut(s) 556
BspT104I TTCGAA 1 cut(s) 942
BspTI CTTAAG 1 cut(s) 200
BspTNI GGTCTC 1 cut(s) 413
BsrDI GCAATG 1 cut(s) 1032
BsrI ACTGG 2 cut(s) 627, 1176
BssECI CCNNGG 1 cut(s) 1067
BssMI GATC 5 cut(s) 375, 548, 682, 901, 913
BssT1I CCWWGG 1 cut(s) 1067
Bst4CI ACNGT 3 cut(s) 17, 230, 696
Bst6I CTCTTC 2 cut(s) 71, 882
BstAFI CTTAAG 1 cut(s) 200
BstAPI GCANNNNNTGC 1 cut(s) 589
BstBI TTCGAA 1 cut(s) 942
BstC8I GCNNGC 1 cut(s) 1116
BstDEI CTNAG 5 cut(s) 26, 34, 372, 843, 859
BstDSI CCRYGG 1 cut(s) 1067
BstF5I GGATG 3 cut(s) 631, 1063, 1197
BstKTI GATC 5 cut(s) 378, 551, 685, 904, 916
BstMAI GTCTC 3 cut(s) 25, 413, 1091
BstMBI GATC 5 cut(s) 375, 548, 682, 901, 913
BstMCI CGRYCG 1 cut(s) 1192
BstMWI GCNNNNNNNGC 2 cut(s) 589, 968
BstSLI GKGCMC 2 cut(s) 325, 594
BstV1I GCAGC 3 cut(s) 185, 620, 1123
Bsu36I CCTNAGG 1 cut(s) 843
BsuRI GGCC 4 cut(s) 209, 971, 1006, 1239
BtgI CCRYGG 1 cut(s) 1067
BtsCI GGATG 3 cut(s) 631, 1063, 1197
BtsIMutI CAGTG 1 cut(s) 755
Cac8I GCNNGC 1 cut(s) 1116
CciI TCATGA 2 cut(s) 223, 916
Cfr13I GGNCC 3 cut(s) 164, 500, 730
CseI GACGC 1 cut(s) 1107
Csp6I GTAC 2 cut(s) 109, 724
CspCI CAANNNNNGTGG 2 cut(s) 801, 836
CviAII CATG 4 cut(s) 224, 917, 1012, 1068
CviQI GTAC 2 cut(s) 109, 724
DdeI CTNAG 5 cut(s) 26, 34, 372, 843, 859
DpnI GATC 5 cut(s) 377, 550, 684, 903, 915
DpnII GATC 5 cut(s) 375, 548, 682, 901, 913
DraI TTTAAA 1 cut(s) 234
EaeI YGGCCR 1 cut(s) 969
Eam1104I CTCTTC 2 cut(s) 71, 882
EarI CTCTTC 2 cut(s) 71, 882
EciI GGCGGA 1 cut(s) 863
Eco130I CCWWGG 1 cut(s) 1067
Eco147I AGGCCT 1 cut(s) 1006
Eco31I GGTCTC 1 cut(s) 413
Eco47I GGWCC 3 cut(s) 164, 500, 730
Eco57I CTGAAG 2 cut(s) 95, 728
Eco81I CCTNAGG 1 cut(s) 843
EcoT14I CCWWGG 1 cut(s) 1067
ErhI CCWWGG 1 cut(s) 1067
FaeI CATG 4 cut(s) 227, 920, 1015, 1071
FaqI GGGAC 2 cut(s) 513, 727
FatI CATG 4 cut(s) 223, 916, 1011, 1067
FblI GTMKAC 1 cut(s) 698
Fnu4HI GCNGC 3 cut(s) 174, 609, 1112
FokI GGATG 3 cut(s) 638, 1050, 1184
Fsp4HI GCNGC 3 cut(s) 174, 609, 1112
FspBI CTAG 5 cut(s) 189, 404, 554, 899, 1034
GluI GCNGC 3 cut(s) 174, 609, 1112
HaeIII GGCC 4 cut(s) 209, 971, 1006, 1239
HapII CCGG 1 cut(s) 1192
HgaI GACGC 1 cut(s) 1107
Hin1II CATG 4 cut(s) 227, 920, 1015, 1071
HindIII AAGCTT 2 cut(s) 398, 856
HinfI GANTC 3 cut(s) 892, 907, 1204
HpaII CCGG 1 cut(s) 1192
HphI GGTGA 6 cut(s) 254, 370, 406, 1080, 1166, 1175
Hpy166II GTNNAC 3 cut(s) 265, 592, 699
Hpy188I TCNGA 7 cut(s) 13, 27, 71, 375, 652, 837, 906
Hpy188III TCNNGA 6 cut(s) 91, 224, 677, 911, 917, 1201
Hpy8I GTNNAC 3 cut(s) 265, 592, 699
Hpy99I CGWCG 1 cut(s) 17
HpyAV CCTTC 4 cut(s) 199, 239, 598, 1154
HpyCH4III ACNGT 3 cut(s) 17, 230, 696
HpyCH4IV ACGT 2 cut(s) 774, 1137
HpyCH4V TGCA 6 cut(s) 565, 583, 592, 709, 1048, 1111
HpyF10VI GCNNNNNNNGC 2 cut(s) 589, 968
HpyF3I CTNAG 5 cut(s) 26, 34, 372, 843, 859
HpySE526I ACGT 2 cut(s) 774, 1137
Hsp92II CATG 4 cut(s) 227, 920, 1015, 1071
Kzo9I GATC 5 cut(s) 375, 548, 682, 901, 913
LmnI GCTCC 5 cut(s) 659, 802, 936, 996, 1194
LpnPI CCDG 9 cut(s) 531, 608, 747, 855, 953, 1189, 1205, 1214, 1226
Lsp1109I GCAGC 3 cut(s) 185, 620, 1123
LweI GCATC 4 cut(s) 570, 1072, 1072, 1206
MaeI CTAG 5 cut(s) 189, 404, 554, 899, 1034
MaeII ACGT 2 cut(s) 774, 1137
MaeIII GTNAC 5 cut(s) 49, 135, 770, 874, 1119
MalI GATC 5 cut(s) 377, 550, 684, 903, 915
MboI GATC 5 cut(s) 375, 548, 682, 901, 913
MboII GAAGA 7 cut(s) 88, 93, 206, 538, 692, 734, 899
MhlI GDGCHC 2 cut(s) 325, 594
MlsI TGGCCA 1 cut(s) 971
MluCI AATT 9 cut(s) 4, 146, 154, 237, 585, 631, 668, 825, 866
MluNI TGGCCA 1 cut(s) 971
MmeI TCCRAC 1 cut(s) 36
Mox20I TGGCCA 1 cut(s) 971
MroXI GAANNNNTTC 2 cut(s) 110, 741
MscI TGGCCA 1 cut(s) 971
MseI TTAA 4 cut(s) 201, 233, 351, 983
MslI CAYNNNNRTG 4 cut(s) 123, 305, 387, 597
Msp20I TGGCCA 1 cut(s) 971
MspA1I CMGCKG 1 cut(s) 950
MspCI CTTAAG 1 cut(s) 200
MspI CCGG 1 cut(s) 1192
MwoI GCNNNNNNNGC 2 cut(s) 589, 968
NcoI CCATGG 1 cut(s) 1067
NdeII GATC 5 cut(s) 375, 548, 682, 901, 913
NlaIII CATG 4 cut(s) 227, 920, 1015, 1071
NlaIV GGNNCC 3 cut(s) 501, 675, 732
NmuCI GTSAC 2 cut(s) 770, 1119
NspV TTCGAA 1 cut(s) 942
OliI CACNNNNGTG 1 cut(s) 123
PagI TCATGA 2 cut(s) 223, 916
PceI AGGCCT 1 cut(s) 1006
PdmI GAANNNNTTC 2 cut(s) 110, 741
PfeI GAWTC 3 cut(s) 892, 907, 1204
PflFI GACNNNGTC 1 cut(s) 17
PkrI GCNGC 3 cut(s) 175, 610, 1113
PshBI ATTAAT 1 cut(s) 351
PsiI TTATAA 1 cut(s) 1172
PspN4I GGNNCC 3 cut(s) 501, 675, 732
PspPI GGNCC 3 cut(s) 164, 500, 730
PsyI GACNNNGTC 1 cut(s) 17
PvuII CAGCTG 1 cut(s) 950
RsaI GTAC 2 cut(s) 110, 725
RsaNI GTAC 2 cut(s) 109, 724
RseI CAYNNNNRTG 4 cut(s) 123, 305, 387, 597
SaqAI TTAA 4 cut(s) 201, 233, 351, 983
SatI GCNGC 3 cut(s) 174, 609, 1112
Sau3AI GATC 5 cut(s) 375, 548, 682, 901, 913
Sau96I GGNCC 3 cut(s) 164, 500, 730
ScaI AGTACT 1 cut(s) 110
SduI GDGCHC 2 cut(s) 325, 594
SfaNI GCATC 4 cut(s) 570, 1072, 1072, 1206
SfuI TTCGAA 1 cut(s) 942
SinI GGWCC 3 cut(s) 164, 500, 730
SmiMI CAYNNNNRTG 4 cut(s) 123, 305, 387, 597
SmlI CTYRAG 2 cut(s) 168, 200
SmoI CTYRAG 2 cut(s) 168, 200
Sse9I AATT 9 cut(s) 4, 146, 154, 237, 585, 631, 668, 825, 866
SseBI AGGCCT 1 cut(s) 1006
SsiI CCGC 2 cut(s) 503, 848
SspI AATATT 1 cut(s) 183
SspMI CTAG 5 cut(s) 189, 404, 554, 899, 1034
StuI AGGCCT 1 cut(s) 1006
StyI CCWWGG 1 cut(s) 1067
TaaI ACNGT 3 cut(s) 17, 230, 696
TaiI ACGT 2 cut(s) 777, 1140
TaqI TCGA 4 cut(s) 159, 578, 912, 942
TasI AATT 9 cut(s) 4, 146, 154, 237, 585, 631, 668, 825, 866
TatI WGTACW 1 cut(s) 108
TfiI GAWTC 3 cut(s) 892, 907, 1204
Tru1I TTAA 4 cut(s) 201, 233, 351, 983
Tru9I TTAA 4 cut(s) 201, 233, 351, 983
TscAI CASTG 1 cut(s) 762
TseFI GTSAC 2 cut(s) 770, 1119
TseI GCWGC 3 cut(s) 173, 608, 1111
Tsp45I GTSAC 2 cut(s) 770, 1119
TspRI CASTG 1 cut(s) 762
Tth111I GACNNNGTC 1 cut(s) 17
Vha464I CTTAAG 1 cut(s) 200
VneI GTGCAC 1 cut(s) 590
VpaK11BI GGWCC 3 cut(s) 164, 500, 730
VspI ATTAAT 1 cut(s) 351
XapI RAATTY 3 cut(s) 154, 631, 866
XmiI GTMKAC 1 cut(s) 698
XmnI GAANNNNTTC 2 cut(s) 110, 741
XspI CTAG 5 cut(s) 189, 404, 554, 899, 1034
ZrmI AGTACT 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.