RLG00000032259

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
12667924 .. 12674924
7001 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032259

Sequence Viewer

Length: 4536 bp
ATGGAATCGAGTAGTGGTGCCATGGCCTTGCATGTGATGTTCATTATGCGACTCTCATTGATGGGAGTACTACTGGTCGTATTAGCAGCAGCTGATCAAGCTCTCCTGCCTCAAGCTCTGCCTGGCTGCACTGACCGCTGCGGTGATCTCGTAATTCCATACCCATTTGGCATAGGTGAAGGTTGTTACCTTCGACAAGAATTTCAAATCACTTGTGACCAATCAACCCAACCCCCATCAGCAAACTGGACAGGCACTAATATCCGCATCGCTAACTTCTGGCTTGCAGAGGGTGAGTTGCAAATAAACAGTTACACCGCCCGAGATTGTTATGACCAGCAAGGCGAAAGAACCTACCACAACAGCCCTGAGTTATCGCTGGTTCCGCCCTACACCATATCCGATACCAAAAACAAGTTCATCGCAGTTGGATGCGACACTTATGCAATCTTTACAGGATACCAAGGGGAAGAAAGGTACATAACCGGGTGCATGTCCTTGTGTAACAGCCTTGGCAGCGTCGATGGGTCCTGCTCTGGCATTGGATGTTGCCAAACCTCCATCCCTAGTGGAATGACAAACCGTACTGTCACTTTGAGTAGCTATTATAATCACTCTGATATATGGAGCTTCAACCCCTGCAGCTACGCATTCATTGTGCAAGAAGGCCAGTTTAGTTTCTCTAATACAAGTTTTCAAGAACTGAACATCACTAAACAACTGCCGATGGTTCTTAACTGGGCAATTGGGAATGAACCAGACCCATGTGATGCAGCTGAAAAGAGGGAGGACTTTGCATGCAACAAAAATAGCAAGTGTGTCAACCACAACAACAGGAATGGTTATGTTTGTGAATGTTTACCAGGCTACGAAGGCAATCCATACCTTCCAGATGGTTGCCAAGATATTGATGACTGCTTGGATTCAAACCCATGCAAGATTGGAAAATGTGTAAATTCACCTCCGGGAGATTACTCTTGTTTATGTCCCAAAGCATACAGAAACGACGTCATGGATGAAAAGATCTGCATCAAAGAAAATCCCAAAAACCAATCAAAGATCACTCTCCCGCTTATTATTTCATTGAGTGTCAGTCTAGGCTTCTTGGGTATATGGGTTGGAATTTCATGGATATATTGGGCAATGAAGAAAAGAGATTTCATCAAACTCAAAGAGAAGTACTTCAGAGAAAATGGTGGATTACTGTTACAGCAACAACTCGCTAGACATGGAATGGAGACAGCAAAACTCTATAGTGCAGAGGAACTTGAGAAGGCCACAAACTATTACCATGCAAGTACAGTCCTTGGTGAAGGAAGCTATGGAACAGTCTACAAAGGAATACTACCAGATAACAAAGAGGTCGCTATTAAAAAGTCTAAAATTGGTGCTCGTGCTCAGAGCAATCAGTTTGTTAATGAGGTGATAATTGTTTCTCAAATAAACCACAGAAATGTGGTGAGGTTATTAGGTTGTTGCTTAGAGACAGAAGTGCCTTTACTAGTTTATGAGTTCATCAGGTGTGGAACTCTTTCTGAGCACATTCATAAAGAAACCAAAGGAGCATCACTGTCATTGGGTTTACGACTGAAGATAGCAGCAGAAACCGCAGGAGCACTAGCATACTTACACTCGTCCACTTCCATGCCAATCATTCACCGAGATGTCAAAGCAACGAATATACTATTGGACGAAAATTACACAGCAAAAGTGTCAGATTTTGGAGCTTCACGATTGGTTCCTCTAGATCAAAATCAACTATCAACTTTAGTGCAAGGGACACTTGGATACCTAGACCCTGAATACTTACTTACTAATCAGCTAACAGAAAAGAGTGATGTTTATAGCTTTGGAGTTGTTCTTGTGGAACTGCTTACTAGTCAAGTTGCACTTTCTTTTGACCGCCGTGAGGAAGAGAGAAGCCTAGCAAGCTTCTTTGTTCGTTCAATAGAGGAGGATCACTTAAAAGAAATTCTTGATGGTGACATAGTTGATGATGGACATGTTGATGAGACACTAAAAAATATGGCTAATCTTGCAAAAAGATGTTTGAGACTAAAAGGCGAGGAAAGGCCTACCATGAAAGAAGTAGCCACAGAGCTAGATGGAATGAGAATTACGATAATGCATCCATGCGGTAAAGCTGATTTCGGTTCAGAAGAGACTGAGAATTTGGAGACGAATGCTGTTGCTGTTAAAGATAATCAAGTAGTTGCCAGTAGTGCATCAGAGAATGGAGCAGATGATGCTGAAGGAGCTTCATATATGCATGTCATGGAATTGCATACCATGCTTATTATGCAACTGATCTCTTTAGCAATAGTGGGAGTACTGGTTGTAACAATAACAACTGAAACAATCACATCAGCAGAAGCAGCAGCTCAGTCCTTGCCAGGATGCAAAACCCAGTGTGGTAATCTGATGATTCCTTACCCATTTGGCATAGGTGACGGTTGTTACTTGCGACCAGAATTCAACATCACTTGTGACCATTCCACCACACCTCCATCAGCAAACTTCACGAATTATAGCATACGTATTGCTCACATATCCCTTGCTGAGGGTGAGTTGCGAATAATGCAAGACGTAGGTGTAGAATGTTATGACACCCAGGGTCGTGAAACGGACTATAACTGGCCTTCTCTCCAGTTGCCTCCTCCTTATACCATCTCTGATACCAAAAACAAGTTCTTTGACATTGGCTGTGGCACTGTAGCTATTTTTCAAGGTGACCGCACGCACCCTGGGCCAGATGAAGATAAGTCCACAGCGGGGTACACCATGGTCTTATGTGATGATCTGCTTGGCAAAGTACTTACAAACTCTTGCAATGGCGTTGGCTGTTCCCAGGTTCCTATCCCAAGTGGATTGCACAACTTTACAATAATTCTGAGTCCAATTGCGGATAATACAGGTACATGGTTGACTAGGTATCCTTGTAGCTATTCCTTCATTGTGGAAGTAGCCATGTTCACATTCTCCCCCGATACAAGTTTTGATTTACTGAATACCACCAGCCAGCTTCCACTCATTGTTAATTGGGGGATTGGGGATGAACCATGTGATGAAAAGAGCCAGAATTATGCATGCAAGGCAGAAAATAGCAAGTGTGTCAACCAGTCCATCATTAATGGGCCGTCTGGTTACATTTGCCAATGCTTACCAGGCTACGAAGGGAATCCATACCTCGAAGATGGGTGCCAAGATATTGATGAGTGCAAGGCTTCAAGCCCCTGCAACATTGGAATGTGCATCAATTCACCTCCAGGAAATTACTCTTGTTTATGTCCCAAAGGATACAAAAATGATGGCACAAATCGACAGAGTTGCATCAAAGACGATCCTAAAAACAACTCAAAGATAACTGTCCTGCTTACTATCGCATTGAGTGTAAGTGTAGGCTTCTTGGTTTTTTTCATTGGAATTTCATGGACATCTTGGGGAATAAAGAAAAGAAACTTCATTAAGCTCAAAGAGAGGTACTTTAAAGAAAATGGTGGTTTGTTATTGCAAAAACAACTCTTTCATCATGGAGGCTCTGCGGAGACAACAAGAATTTTTACTGCAGAAGAACTTGAGAAGGCCACAAACAATTACCATGAAAGTAGAGTCCTTGGTGAAGGAGGATATGGAACCGTTTATAAAGGCATACTACTGAATAACAAAGTGGTTGCCATTAAAAAGTCTAAAATTGCTGCCCCAGCCCAGAGTGATCAATTTGTTAATGAGGTGATTGTTCTTTCTCAAATCAATCACAGAAATGTAGTCAGGCTATTAGGTTGTTGCTTAGAGACAGAAACGCCTTTACTGATTTATGAGTTCATCACCAATGGCACTCTTTATGAGCACATTCATAAGAAAAGATCACTACTTTCTTTGGAATTACGAATGAAGATAGCAGCTGAAACTGCGGGAGCACTAGCATACCTACATTCCTCAACTTCCATGCCAATTATACATCGAGATGTGAAAGCAATGAATATACTATTAGATGATAACTATACAGCAAAAGTGGCAGACTTTGGAGCGTCACGATTGATTCCTTTAGGTCAAACTGAATTAGAAACTTTAGTACTAGGGACATTTGGTTACCTCGACCCTGAATATTTGCAATCAAACCAACTAACAGAAAAGAGTGACGTTTACAGCTTTGGAGTTGTCCTGCTGGAGCTAATAACTAGCAAAGTGGCACTTTGTACAAATAGATGCTTAGCAAGCATCTTCATCTCTGCCATGGAAGAAGGTTGGCTGGATCAAATTCTTGATGATAATATAGTGAATGATGGAAATATGGAGATGGTAAAAATTGTAGCCAATCTTGCAAAAAGATGTTTAAGTGTAAAAGGGCAGGAGAGGCCAACCATGAAAGAGGTAGCGATGGAGCTAGAAGGAATGAGAATGATGGCAAAGCATCCATGGAGAAACAATGCTGATTTCTGTCCAGAAGAGAACGAGAGTTTGCTCAGTTCACTTGATGCAAACACTCACGTGGTGGATATTAGAGGTGATGGTGGTTCTGGCAGTACAAGTGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1512

Amino Acids

166.65

Weight (kDa)

5.1

Isoelectric Point (pI)

33.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 43 - 101 4.3e-08 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 430 - 698 7.1e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 433 - 701 2.4e-47 Protein tyrosine and serine/threonine kinase
GUB_WAK_bind PF13947 800 - 860 7.6e-11 Wall-associated receptor kinase galacturonan-binding
Pkinase PF00069 1199 - 1458 1.2e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1202 - 1462 7.6e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 609, 3642
AatII GACGTC 1 cut(s) 1011
AccB1I GGYRCC 2 cut(s) 17, 3198
AccI GTMKAC 1 cut(s) 1332
AclWI GGATC 3 cut(s) 1965, 3335, 4260
AcsI RAATTY 9 cut(s) 200, 955, 1122, 1971, 2170, 2471, 3423, 3555, 4257
AcuI CTGAAG 3 cut(s) 1168, 1610, 2271
AcvI CACGTG 1 cut(s) 4489
AcyI GRCGYC 1 cut(s) 1008
AdeI CACNNNGTG 1 cut(s) 4492
AfiI CCNNNNNNNGG 3 cut(s) 1909, 2560, 2772
AflIII ACRYGT 1 cut(s) 2002
AgsI TTSAA 8 cut(s) 206, 634, 698, 927, 1947, 2476, 2726, 3228
AhlI ACTAGT 2 cut(s) 1501, 1877
AjnI CCWGG 8 cut(s) 121, 862, 2392, 2610, 2743, 2847, 3163, 3265
AjuI GAANNNNNNNTTGG 6 cut(s) 401, 433, 1670, 1702, 2672, 2704
AleI CACNNNNGTG 1 cut(s) 4487
Alw21I GWGCWC 6 cut(s) 1393, 1399, 1542, 1618, 3849, 3919
Alw26I GTCTC 8 cut(s) 1232, 1478, 2006, 2047, 2156, 2171, 3539, 3785
AlwI GGATC 3 cut(s) 1965, 3335, 4260
AlwNI CAGNNNCTG 1 cut(s) 92
Ama87I CYCGRG 1 cut(s) 321
AoxI GGCC 9 cut(s) 24, 667, 1275, 2072, 2636, 2747, 3134, 3582, 4355
ApoI RAATTY 9 cut(s) 200, 955, 1122, 1971, 2170, 2471, 3423, 3555, 4257
ArsI GACNNNNNNTTYG 2 cut(s) 2155, 2187
AseI ATTAAT 1 cut(s) 3129
Asp700I GAANNNNTTC 2 cut(s) 1181, 1531
AspS9I GGNCC 3 cut(s) 528, 2747, 3134
AsuC2I CCSGG 2 cut(s) 487, 966
AvaI CYCGRG 1 cut(s) 321
AvaII GGWCC 1 cut(s) 528
BanI GGYRCC 2 cut(s) 17, 3198
BarI GAAGNNNNNNTAC 2 cut(s) 1482, 1514
BauI CACGAG 1 cut(s) 1392
BbrPI CACGTG 1 cut(s) 4489
Bbv12I GWGCWC 6 cut(s) 1393, 1399, 1542, 1618, 3849, 3919
BbvCI CCTCAGC 1 cut(s) 2559
BceAI ACGGC 2 cut(s) 1890, 3121
BcgI CGANNNNNNTGC 4 cut(s) 425, 459, 3309, 3343
BciT130I CCWGG 8 cut(s) 123, 864, 2394, 2612, 2745, 2849, 3165, 3267
BciVI GTATCC 4 cut(s) 452, 1781, 2943, 3290
BclI TGATCA 2 cut(s) 94, 3712
BcnI CCSGG 2 cut(s) 487, 966
BcoDI GTCTC 8 cut(s) 1232, 1478, 2006, 2047, 2156, 2171, 3539, 3785
BcuI ACTAGT 2 cut(s) 1501, 1877
BfmI CTRYAG 4 cut(s) 640, 1252, 2712, 3564
BfuI GTATCC 4 cut(s) 452, 1781, 2943, 3290
BglII AGATCT 1 cut(s) 1023
BlpI GCTNAGC 1 cut(s) 4210
BmcAI AGTACT 5 cut(s) 69, 1181, 2331, 2814, 4074
Bme18I GGWCC 1 cut(s) 528
BmeT110I CYCGRG 1 cut(s) 321
BmgT120I GGNCC 3 cut(s) 528, 2747, 3134
BmiI GGNNCC 7 cut(s) 19, 384, 529, 1740, 2853, 3200, 3634
BmrI ACTGGG 2 cut(s) 748, 2401
BmuI ACTGGG 2 cut(s) 748, 2401
BpmI CTGGAG 3 cut(s) 2630, 3249, 4187
Bpu10I CCTNAGC 1 cut(s) 2559
Bpu1102I GCTNAGC 1 cut(s) 4210
BpuEI CTTGAG 3 cut(s) 96, 1289, 3596
BpuMI CCSGG 2 cut(s) 487, 966
BsaAI YACGTR 2 cut(s) 2537, 4489
BsaBI GATNNNNATC 2 cut(s) 1028, 1752
BsaHI GRCGYC 1 cut(s) 1008
BsaXI ACNNNNNCTCC 4 cut(s) 2319, 2349, 2488, 2518
Bsc4I CCNNNNNNNGG 3 cut(s) 1909, 2560, 2772
Bse3DI GCAATG 3 cut(s) 1149, 2836, 3981
Bse8I GATNNNNATC 2 cut(s) 1028, 1752
BseBI CCWGG 8 cut(s) 123, 864, 2394, 2612, 2745, 2849, 3165, 3267
BseGI GGATG 8 cut(s) 437, 551, 561, 1021, 2128, 2402, 3058, 4411
BseJI GATNNNNATC 2 cut(s) 1028, 1752
BseLI CCNNNNNNNGG 3 cut(s) 1909, 2560, 2772
BseMI GCAATG 3 cut(s) 1149, 2836, 3981
BseMII CTCAG 8 cut(s) 360, 1412, 1527, 2157, 2396, 2550, 2882, 4477
BseRI GAGGAG 2 cut(s) 1967, 2646
BseYI CCCAGC 1 cut(s) 3700
BsgI GTGCAG 2 cut(s) 112, 1278
BshFI GGCC 9 cut(s) 26, 669, 1277, 2074, 2638, 2749, 3136, 3584, 4357
BshNI GGYRCC 2 cut(s) 17, 3198
BsiHKAI GWGCWC 6 cut(s) 1393, 1399, 1542, 1618, 3849, 3919
BsiHKCI CYCGRG 1 cut(s) 321
BsiSI CCGG 2 cut(s) 486, 965
BslFI GGGAC 4 cut(s) 972, 1792, 3273, 4093
BslI CCNNNNNNNGG 3 cut(s) 1909, 2560, 2772
BsmAI GTCTC 8 cut(s) 1232, 1478, 2006, 2047, 2156, 2171, 3539, 3785
BsmBI CGTCTC 1 cut(s) 2171
BsmFI GGGAC 4 cut(s) 972, 1792, 3273, 4093
BsmI GAATGC 2 cut(s) 650, 2188
BsnI GGCC 9 cut(s) 26, 669, 1277, 2074, 2638, 2749, 3136, 3584, 4357
BsoBI CYCGRG 1 cut(s) 321
Bsp1286I GDGCHC 6 cut(s) 1393, 1399, 1542, 1618, 3849, 3919
Bsp1407I TGTACA 1 cut(s) 4196
Bsp1720I GCTNAGC 1 cut(s) 4210
Bsp19I CCATGG 4 cut(s) 21, 2781, 4233, 4415
BspANI GGCC 9 cut(s) 26, 669, 1277, 2074, 2638, 2749, 3136, 3584, 4357
BspCNI CTCAG 8 cut(s) 361, 1411, 1528, 2158, 2395, 2551, 2883, 4476
BspLI GGNNCC 7 cut(s) 19, 384, 529, 1740, 2853, 3200, 3634
BspMAI CTGCAG 2 cut(s) 644, 3568
BspPI GGATC 3 cut(s) 1965, 3335, 4260
BspT107I GGYRCC 2 cut(s) 17, 3198
BsrDI GCAATG 3 cut(s) 1149, 2836, 3981
BsrGI TGTACA 1 cut(s) 4196
BssNI GRCGYC 1 cut(s) 1008
BssSI CACGAG 1 cut(s) 1392
BssT1I CCWWGG 8 cut(s) 21, 463, 511, 1306, 2781, 3613, 4233, 4415
Bst2BI CACGAG 1 cut(s) 1392
Bst2UI CCWGG 8 cut(s) 123, 864, 2394, 2612, 2745, 2849, 3165, 3267
Bst6I CTCTTC 3 cut(s) 1908, 2154, 4440
BstACI GRCGYC 1 cut(s) 1008
BstAPI GCANNNNNTGC 2 cut(s) 2246, 2290
BstAUI TGTACA 1 cut(s) 4196
BstBAI YACGTR 2 cut(s) 2537, 4489
BstC8I GCNNGC 7 cut(s) 285, 799, 1930, 2738, 3020, 3088, 4216
BstDSI CCRYGG 4 cut(s) 21, 2781, 4233, 4415
BstEII GGTNACC 2 cut(s) 2729, 4088
BstENI CCTNNNNNAGG 1 cut(s) 2558
BstF5I GGATG 8 cut(s) 437, 551, 561, 1021, 2128, 2402, 3058, 4411
BstMAI GTCTC 8 cut(s) 1232, 1478, 2006, 2047, 2156, 2171, 3539, 3785
BstNI CCWGG 8 cut(s) 123, 864, 2394, 2612, 2745, 2849, 3165, 3267
BstNSI RCATGY 6 cut(s) 35, 496, 801, 2006, 2273, 3090
BstPI GGTNACC 2 cut(s) 2729, 4088
BstSFI CTRYAG 4 cut(s) 640, 1252, 2712, 3564
BstSNI TACGTA 1 cut(s) 2537
BstX2I RGATCY 1 cut(s) 1023
BstYI RGATCY 1 cut(s) 1023
BsuI GTATCC 4 cut(s) 452, 1781, 2943, 3290
BsuRI GGCC 9 cut(s) 26, 669, 1277, 2074, 2638, 2749, 3136, 3584, 4357
BtgI CCRYGG 4 cut(s) 21, 2781, 4233, 4415
BtgZI GCGATG 3 cut(s) 253, 406, 4391
BtsCI GGATG 8 cut(s) 437, 551, 561, 1021, 2128, 2402, 3058, 4411
BtsIMutI CAGTG 4 cut(s) 129, 1568, 2414, 2709
Cac8I GCNNGC 7 cut(s) 285, 799, 1930, 2738, 3020, 3088, 4216
CaiI CAGNNNCTG 1 cut(s) 92
Cfr13I GGNCC 3 cut(s) 528, 2747, 3134
CseI GACGC 2 cut(s) 508, 4017
DraI TTTAAA 1 cut(s) 3487
DraIII CACNNNGTG 1 cut(s) 4492
Eam1104I CTCTTC 3 cut(s) 1908, 2154, 4440
EarI CTCTTC 3 cut(s) 1908, 2154, 4440
EciI GGCGGA 1 cut(s) 375
Eco105I TACGTA 1 cut(s) 2537
Eco130I CCWWGG 8 cut(s) 21, 463, 511, 1306, 2781, 3613, 4233, 4415
Eco147I AGGCCT 1 cut(s) 2074
Eco47I GGWCC 1 cut(s) 528
Eco57I CTGAAG 3 cut(s) 1168, 1610, 2271
Eco72I CACGTG 1 cut(s) 4489
Eco88I CYCGRG 1 cut(s) 321
Eco91I GGTNACC 2 cut(s) 2729, 4088
EcoNI CCTNNNNNAGG 1 cut(s) 2558
EcoO109I RGGNCCY 1 cut(s) 528
EcoO65I GGTNACC 2 cut(s) 2729, 4088
EcoRI GAATTC 1 cut(s) 2471
EcoRII CCWGG 8 cut(s) 121, 862, 2392, 2610, 2743, 2847, 3163, 3265
EcoT14I CCWWGG 8 cut(s) 21, 463, 511, 1306, 2781, 3613, 4233, 4415
EcoT22I ATGCAT 3 cut(s) 2130, 2271, 3088
ErhI CCWWGG 8 cut(s) 21, 463, 511, 1306, 2781, 3613, 4233, 4415
Esp3I CGTCTC 1 cut(s) 2171
FalI AAGNNNNNCTT 8 cut(s) 1767, 1799, 1875, 1907, 1959, 1991, 4176, 4208
FaqI GGGAC 4 cut(s) 972, 1792, 3273, 4093
FauI CCCGC 3 cut(s) 1077, 2764, 3904
FbaI TGATCA 2 cut(s) 94, 3712
FblI GTMKAC 1 cut(s) 1332
FokI GGATG 8 cut(s) 444, 548, 558, 1028, 2115, 2409, 3065, 4398
GsaI CCCAGC 1 cut(s) 3704
GsuI CTGGAG 3 cut(s) 2630, 3249, 4187
HaeIII GGCC 9 cut(s) 26, 669, 1277, 2074, 2638, 2749, 3136, 3584, 4357
HapII CCGG 2 cut(s) 486, 965
HgaI GACGC 2 cut(s) 508, 4017
Hin1I GRCGYC 1 cut(s) 1008
HincII GTYRAC 3 cut(s) 823, 2925, 3115
HindII GTYRAC 3 cut(s) 823, 2925, 3115
HindIII AAGCTT 1 cut(s) 1930
HinfI GANTC 8 cut(s) 5, 51, 923, 2425, 2893, 3178, 3609, 4039
HpaII CCGG 2 cut(s) 486, 965
Hpy99I CGWCG 2 cut(s) 524, 1010
HpyCH4IV ACGT 5 cut(s) 1008, 2536, 2586, 4140, 4488
HpySE526I ACGT 5 cut(s) 1008, 2536, 2586, 4140, 4488
Hsp92I GRCGYC 1 cut(s) 1008
Ksp22I TGATCA 2 cut(s) 94, 3712
MaeII ACGT 5 cut(s) 1008, 2536, 2586, 4140, 4488
MfeI CAATTG 2 cut(s) 744, 2898
MflI RGATCY 1 cut(s) 1023
MhlI GDGCHC 6 cut(s) 1393, 1399, 1542, 1618, 3849, 3919
MlyI GAGTC 3 cut(s) 45, 2902, 3618
MmeI TCCRAC 2 cut(s) 409, 1099
Mph1103I ATGCAT 3 cut(s) 2130, 2271, 3088
MroXI GAANNNNTTC 2 cut(s) 1181, 1531
MslI CAYNNNNRTG 8 cut(s) 1452, 1643, 1662, 2007, 3245, 3759, 3963, 4487
MspA1I CMGCKG 5 cut(s) 92, 138, 776, 2771, 3902
MspI CCGG 2 cut(s) 486, 965
MunI CAATTG 2 cut(s) 744, 2898
Mva1269I GAATGC 2 cut(s) 650, 2188
MvaI CCWGG 8 cut(s) 123, 864, 2394, 2612, 2745, 2849, 3165, 3267
NciI CCSGG 2 cut(s) 487, 966
NcoI CCATGG 4 cut(s) 21, 2781, 4233, 4415
NlaIV GGNNCC 7 cut(s) 19, 384, 529, 1740, 2853, 3200, 3634
NmuCI GTSAC 8 cut(s) 215, 589, 1982, 2447, 2486, 2729, 4029, 4136
NsiI ATGCAT 3 cut(s) 2130, 2271, 3088
NspI RCATGY 6 cut(s) 35, 496, 801, 2006, 2273, 3090
OliI CACNNNNGTG 1 cut(s) 4487
PaeI GCATGC 2 cut(s) 801, 3090
PasI CCCWGGG 2 cut(s) 2611, 2744
PceI AGGCCT 1 cut(s) 2074
PciI ACATGT 1 cut(s) 2002
PctI GAATGC 2 cut(s) 650, 2188
PdmI GAANNNNTTC 2 cut(s) 1181, 1531
PfeI GAWTC 5 cut(s) 5, 923, 2425, 3178, 4039
PfoI TCCNGGA 2 cut(s) 964, 3265
PleI GAGTC 3 cut(s) 45, 2901, 3617
PmaCI CACGTG 1 cut(s) 4489
PmlI CACGTG 1 cut(s) 4489
PpsI GAGTC 3 cut(s) 45, 2901, 3617
Ppu21I YACGTR 2 cut(s) 2537, 4489
PpuMI RGGWCCY 1 cut(s) 528
PscI ACATGT 1 cut(s) 2002
PshBI ATTAAT 1 cut(s) 3129
PsiI TTATAA 2 cut(s) 609, 3642
Psp5II RGGWCCY 1 cut(s) 528
Psp6I CCWGG 8 cut(s) 121, 862, 2392, 2610, 2743, 2847, 3163, 3265
PspCI CACGTG 1 cut(s) 4489
PspEI GGTNACC 2 cut(s) 2729, 4088
PspFI CCCAGC 1 cut(s) 3700
PspGI CCWGG 8 cut(s) 121, 862, 2392, 2610, 2743, 2847, 3163, 3265
PspN4I GGNNCC 7 cut(s) 19, 384, 529, 1740, 2853, 3200, 3634
PspPI GGNCC 3 cut(s) 528, 2747, 3134
PspPPI RGGWCCY 1 cut(s) 528
PstI CTGCAG 2 cut(s) 644, 3568
PstNI CAGNNNCTG 1 cut(s) 92
PsuI RGATCY 1 cut(s) 1023
PvuII CAGCTG 3 cut(s) 92, 776, 3902
RseI CAYNNNNRTG 8 cut(s) 1452, 1643, 1662, 2007, 3245, 3759, 3963, 4487
Sau96I GGNCC 3 cut(s) 528, 2747, 3134
ScaI AGTACT 5 cut(s) 69, 1181, 2331, 2814, 4074
SchI GAGTC 3 cut(s) 45, 2902, 3618
SduI GDGCHC 6 cut(s) 1393, 1399, 1542, 1618, 3849, 3919
SfcI CTRYAG 4 cut(s) 640, 1252, 2712, 3564
SinI GGWCC 1 cut(s) 528
SmiMI CAYNNNNRTG 8 cut(s) 1452, 1643, 1662, 2007, 3245, 3759, 3963, 4487
SmlI CTYRAG 3 cut(s) 111, 1268, 3575
SmoI CTYRAG 3 cut(s) 111, 1268, 3575
SnaBI TACGTA 1 cut(s) 2537
SpeI ACTAGT 2 cut(s) 1501, 1877
SphI GCATGC 2 cut(s) 801, 3090
SseBI AGGCCT 1 cut(s) 2074
SspI AATATT 1 cut(s) 4106
StuI AGGCCT 1 cut(s) 2074
StyI CCWWGG 8 cut(s) 21, 463, 511, 1306, 2781, 3613, 4233, 4415
TaiI ACGT 5 cut(s) 1011, 2539, 2589, 4143, 4491
TaqI TCGA 7 cut(s) 8, 193, 522, 3189, 3319, 3961, 4095
TatI WGTACW 8 cut(s) 67, 1179, 1298, 2329, 2812, 4072, 4196, 4523
TfiI GAWTC 5 cut(s) 5, 923, 2425, 3178, 4039
TscAI CASTG 4 cut(s) 136, 1575, 2414, 2716
TseFI GTSAC 8 cut(s) 215, 589, 1982, 2447, 2486, 2729, 4029, 4136
Tsp45I GTSAC 8 cut(s) 215, 589, 1982, 2447, 2486, 2729, 4029, 4136
TspGWI ACGGA 1 cut(s) 2639
TspRI CASTG 4 cut(s) 136, 1575, 2414, 2716
VpaK11BI GGWCC 1 cut(s) 528
VspI ATTAAT 1 cut(s) 3129
XagI CCTNNNNNAGG 1 cut(s) 2558
XapI RAATTY 9 cut(s) 200, 955, 1122, 1971, 2170, 2471, 3423, 3555, 4257
XbaI TCTAGA 1 cut(s) 1744
XceI RCATGY 6 cut(s) 35, 496, 801, 2006, 2273, 3090
XcmI CCANNNNNNNNNTGG 1 cut(s) 243
XmiI GTMKAC 1 cut(s) 1332
XmnI GAANNNNTTC 2 cut(s) 1181, 1531
ZraI GACGTC 1 cut(s) 1009
ZrmI AGTACT 5 cut(s) 69, 1181, 2331, 2814, 4074
Zsp2I ATGCAT 3 cut(s) 2130, 2271, 3088
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.