Rroxscaffold_1G00060300

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Forward (+)
82509673 .. 82511584
1912 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00060300.1

Sequence Viewer

Length: 1389 bp
ATGGCTTTTCCATTCCCATCTTCCATTTCAGATATTGATGAGTGCAAGGCTTCAAACCCCTGCCAGAATGGAGAGTGCTCAAATTCACCAGGAGATTACTCTTGTAAATGTCACAAAGGATACAAACACGATCGCATAAATGGCAAGAGTTGCATCAAGCCATCAAAGACAATTCCAAAAGTCAACTGTGTAAGTGTAGGCTTCTTGGTTTCATTCATTGAAATTTCATGGTTATGGTGGGGAAATAAGAAAAGACGATTCATCAAACTGAAAGAAAAGTACTTCAAAGAAAATGGAGGCATATTGTTACAACAACAACTTGCCAGTCATGGAGGTTCCATGGAAACAACAAAAATTTTTACTGCAGAGGAACTTCAGAGGGCCACAAATAATTACCATGAAAGTAGAGTTCTTGGCAAAGGAGGCTATGGAATAGTATACAAAGGTATACTACCAGATAACCAAGTGGTTGCCATAAAGAAGTCAAAAGTTGGTTCACTGGGTCAGAGTAAGCAATTCGTCAACGAGGTGATCCTTCTTTCTCAAATCAACCACAGAAATGTGGTGAAGCTTTTAGGTTGTTGCTTAGAAACAGAAGTGCCTTTACTAGTATACGAGTTCATCAACCATGGGACTCTTTATGAGCACATTCATAAGAAAAGATCATCACTCTCATTTGAATTACGAATGAAGATAGCAGCTGAAGCAGCAGGAGCACTAGCCCATTTACACTCCTCAATTTCCACACCAATCATACATCGAGATGTCAAAGCAGCAAATATTCTTTTAGATGATAATTATATGGCGAAAGTGTCAGACTTTGGAGCTTCACGATTGGTTTCTTCAGGTGAAGCTGGAATCCAAACTGTAGTGCTCGGGACATTCGGATACCTGGACCCTGAATATCTTCAATCAAACCAACTAACTGACAAGAGTGACGTTTACAGCTTTGGGGTTCTCTTGGCTGAGCTTTTAACAAGTAAAGTGGCAGTTTCTAAAGATAAAGATAGATGCTTAGCAAGCATCTTTGTTGCTTCCATGGAAGAAGATTGCTTAAATCAAGTGCTTGATGATGAGATAGTGAATGAAGGAAACATTGAGATGGTGAAAAATGTGGCCACTCTTGCAAGAAGATGTTTGAGGGTAAAAGGGGAGGAAAGGCCTACCATGAGAGAAGTAGCCATGGAGCTAGAAGGAATGATTATGACAAAGCATCCATGGGGTTCTGAGGATCATTACTTTTCGGAAGAGACTAAGCACTTGCTTGGATCACCTAATACTTCAAAGGATTACTCTGTGAATGTTGATGGTGGTGGTGGTCCTGGTACTGCCAGTGGGTCTAGCATGCAAATAGACATGTCAATGTCTTCATATGCTGATGGGCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

462

Amino Acids

51.0

Weight (kDa)

6.92

Isoelectric Point (pI)

43.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EGF_CA PF07645 11 - 51 3.5e-06 Calcium-binding EGF domain
Pkinase PF00069 132 - 393 2e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 135 - 397 3.7e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 3 cut(s) 438, 448, 612
AclWI GGATC 3 cut(s) 526, 1239, 1276
AcoI YGGCCR 1 cut(s) 1116
AcsI RAATTY 3 cut(s) 82, 222, 354
AcuI CTGAAG 3 cut(s) 359, 723, 828
AfaI GTAC 2 cut(s) 281, 1327
AflIII ACRYGT 1 cut(s) 1356
AgsI TTSAA 6 cut(s) 54, 221, 286, 680, 911, 1284
AhlI ACTAGT 1 cut(s) 607
AjnI CCWGG 3 cut(s) 88, 891, 1321
AluBI AGCT 7 cut(s) 571, 701, 827, 854, 948, 970, 1189
AluI AGCT 7 cut(s) 571, 701, 827, 854, 948, 970, 1189
Alw21I GWGCWC 4 cut(s) 80, 648, 718, 876
Alw26I GTCTC 1 cut(s) 1244
AlwI GGATC 3 cut(s) 526, 1239, 1276
Ama87I CYCGRG 1 cut(s) 875
AoxI GGCC 3 cut(s) 381, 1116, 1160
ApeKI GCWGC 3 cut(s) 698, 707, 773
ApoI RAATTY 3 cut(s) 82, 222, 354
Asp700I GAANNNNTTC 1 cut(s) 906
AspS9I GGNCC 3 cut(s) 381, 895, 1319
AsuHPI GGTGA 6 cut(s) 78, 541, 577, 860, 1117, 1263
AvaI CYCGRG 1 cut(s) 875
AvaII GGWCC 2 cut(s) 895, 1319
BalI TGGCCA 1 cut(s) 1118
BarI GAAGNNNNNNTAC 2 cut(s) 588, 620
BbsI GAAGAC 1 cut(s) 1359
Bbv12I GWGCWC 4 cut(s) 80, 648, 718, 876
BbvI GCAGC 3 cut(s) 710, 719, 785
BccI CCATC 5 cut(s) 25, 169, 1096, 1301, 1373
BciT130I CCWGG 3 cut(s) 90, 893, 1323
BciVI GTATCC 2 cut(s) 113, 881
BcoDI GTCTC 1 cut(s) 1244
BcuI ACTAGT 1 cut(s) 607
BfaI CTAG 4 cut(s) 608, 719, 1190, 1341
BfmI CTRYAG 2 cut(s) 363, 867
BfuI GTATCC 2 cut(s) 113, 881
BisI GCNGC 3 cut(s) 699, 708, 774
BlpI GCTNAGC 2 cut(s) 966, 1015
BlsI GCNGC 3 cut(s) 700, 709, 775
BmcAI AGTACT 1 cut(s) 281
Bme1390I CCNGG 3 cut(s) 90, 893, 1323
Bme18I GGWCC 2 cut(s) 895, 1319
BmeT110I CYCGRG 1 cut(s) 875
BmgT120I GGNCC 3 cut(s) 381, 895, 1319
BmiI GGNNCC 2 cut(s) 337, 897
BmrFI CCNGG 3 cut(s) 90, 893, 1323
BmrI ACTGGG 1 cut(s) 509
BmsI GCATC 4 cut(s) 162, 1001, 1032, 1222
BmuI ACTGGG 1 cut(s) 509
BpiI GAAGAC 1 cut(s) 1359
Bpu1102I GCTNAGC 2 cut(s) 966, 1015
BsaJI CCNNGG 5 cut(s) 339, 628, 1038, 1182, 1217
Bse1I ACTGG 3 cut(s) 324, 504, 1332
BseBI CCWGG 3 cut(s) 90, 893, 1323
BseDI CCNNGG 5 cut(s) 339, 628, 1038, 1182, 1217
BseGI GGATG 1 cut(s) 1213
BseMII CTCAG 2 cut(s) 957, 1218
BseNI ACTGG 3 cut(s) 324, 504, 1332
BseRI GAGGAG 1 cut(s) 724
BseXI GCAGC 3 cut(s) 710, 719, 785
Bsh1285I CGRYCG 1 cut(s) 133
BshFI GGCC 3 cut(s) 383, 1118, 1162
BsiEI CGRYCG 1 cut(s) 133
BsiHKAI GWGCWC 4 cut(s) 80, 648, 718, 876
BsiHKCI CYCGRG 1 cut(s) 875
BslFI GGGAC 2 cut(s) 646, 892
BsmAI GTCTC 1 cut(s) 1244
BsmFI GGGAC 2 cut(s) 646, 892
BsnI GGCC 3 cut(s) 383, 1118, 1162
BsoBI CYCGRG 1 cut(s) 875
Bsp1286I GDGCHC 4 cut(s) 80, 648, 718, 876
Bsp143I GATC 5 cut(s) 130, 531, 662, 1231, 1268
Bsp1720I GCTNAGC 2 cut(s) 966, 1015
Bsp19I CCATGG 5 cut(s) 339, 628, 1038, 1182, 1217
BspANI GGCC 3 cut(s) 383, 1118, 1162
BspCNI CTCAG 2 cut(s) 958, 1219
BspLI GGNNCC 2 cut(s) 337, 897
BspMAI CTGCAG 1 cut(s) 367
BspPI GGATC 3 cut(s) 526, 1239, 1276
BsrI ACTGG 3 cut(s) 324, 504, 1332
BssECI CCNNGG 5 cut(s) 339, 628, 1038, 1182, 1217
BssMI GATC 5 cut(s) 130, 531, 662, 1231, 1268
BssNAI GTATAC 3 cut(s) 439, 449, 613
BssT1I CCWWGG 5 cut(s) 339, 628, 1038, 1182, 1217
Bst1107I GTATAC 3 cut(s) 439, 449, 613
Bst2UI CCWGG 3 cut(s) 90, 893, 1323
Bst4CI ACNGT 2 cut(s) 188, 868
Bst6I CTCTTC 1 cut(s) 1242
BstAPI GCANNNNNTGC 1 cut(s) 150
BstC8I GCNNGC 2 cut(s) 1021, 1346
BstDEI CTNAG 5 cut(s) 586, 966, 1015, 1227, 1254
BstDSI CCRYGG 5 cut(s) 339, 628, 1038, 1182, 1217
BstF5I GGATG 1 cut(s) 1213
BstKTI GATC 5 cut(s) 133, 534, 665, 1234, 1271
BstMAI GTCTC 1 cut(s) 1244
BstMBI GATC 5 cut(s) 130, 531, 662, 1231, 1268
BstMCI CGRYCG 1 cut(s) 133
BstMWI GCNNNNNNNGC 8 cut(s) 141, 150, 423, 704, 707, 713, 1020, 1124
BstNI CCWGG 3 cut(s) 90, 893, 1323
BstNSI RCATGY 2 cut(s) 1348, 1360
BstSCI CCNGG 3 cut(s) 88, 891, 1321
BstSFI CTRYAG 2 cut(s) 363, 867
BstV1I GCAGC 3 cut(s) 710, 719, 785
BstV2I GAAGAC 1 cut(s) 1359
BstZ17I GTATAC 3 cut(s) 439, 449, 613
BsuI GTATCC 2 cut(s) 113, 881
BsuRI GGCC 3 cut(s) 383, 1118, 1162
BtgI CCRYGG 5 cut(s) 339, 628, 1038, 1182, 1217
BtsCI GGATG 1 cut(s) 1213
BtsIMutI CAGTG 2 cut(s) 497, 1339
Cac8I GCNNGC 2 cut(s) 1021, 1346
Cfr13I GGNCC 3 cut(s) 381, 895, 1319
Csp6I GTAC 2 cut(s) 280, 1326
CspCI CAANNNNNGTGG 2 cut(s) 966, 1001
CviQI GTAC 2 cut(s) 280, 1326
DdeI CTNAG 5 cut(s) 586, 966, 1015, 1227, 1254
DpnI GATC 5 cut(s) 132, 533, 664, 1233, 1270
DpnII GATC 5 cut(s) 130, 531, 662, 1231, 1268
EaeI YGGCCR 1 cut(s) 1116
Eam1104I CTCTTC 1 cut(s) 1242
EarI CTCTTC 1 cut(s) 1242
Eco130I CCWWGG 5 cut(s) 339, 628, 1038, 1182, 1217
Eco147I AGGCCT 1 cut(s) 1162
Eco47I GGWCC 2 cut(s) 895, 1319
Eco57I CTGAAG 3 cut(s) 359, 723, 828
Eco88I CYCGRG 1 cut(s) 875
EcoRII CCWGG 3 cut(s) 88, 891, 1321
EcoT14I CCWWGG 5 cut(s) 339, 628, 1038, 1182, 1217
ErhI CCWWGG 5 cut(s) 339, 628, 1038, 1182, 1217
FaqI GGGAC 2 cut(s) 646, 892
FauNDI CATATG 1 cut(s) 1372
FblI GTMKAC 3 cut(s) 438, 448, 612
Fnu4HI GCNGC 3 cut(s) 699, 708, 774
FokI GGATG 1 cut(s) 1200
Fsp4HI GCNGC 3 cut(s) 699, 708, 774
FspBI CTAG 4 cut(s) 608, 719, 1190, 1341
GluI GCNGC 3 cut(s) 699, 708, 774
HaeIII GGCC 3 cut(s) 383, 1118, 1162
HincII GTYRAC 2 cut(s) 184, 523
HindII GTYRAC 2 cut(s) 184, 523
HindIII AAGCTT 1 cut(s) 569
HinfI GANTC 3 cut(s) 258, 634, 858
HphI GGTGA 6 cut(s) 78, 541, 577, 860, 1117, 1263
Hpy166II GTNNAC 7 cut(s) 184, 439, 449, 497, 523, 613, 943
Hpy188I TCNGA 7 cut(s) 31, 378, 507, 817, 887, 1228, 1246
Hpy188III TCNNGA 3 cut(s) 761, 831, 877
Hpy8I GTNNAC 7 cut(s) 184, 439, 449, 497, 523, 613, 943
HpyAV CCTTC 3 cut(s) 545, 1082, 1187
HpyCH4III ACNGT 2 cut(s) 188, 868
HpyCH4IV ACGT 1 cut(s) 939
HpyCH4V TGCA 5 cut(s) 45, 153, 365, 1127, 1348
HpyF10VI GCNNNNNNNGC 8 cut(s) 141, 150, 423, 704, 707, 713, 1020, 1124
HpyF3I CTNAG 5 cut(s) 586, 966, 1015, 1227, 1254
HpySE526I ACGT 1 cut(s) 939
Kzo9I GATC 5 cut(s) 130, 531, 662, 1231, 1268
LmnI GCTCC 3 cut(s) 713, 824, 1186
Lsp1109I GCAGC 3 cut(s) 710, 719, 785
LweI GCATC 4 cut(s) 162, 1001, 1032, 1222
MaeI CTAG 4 cut(s) 608, 719, 1190, 1341
MaeII ACGT 1 cut(s) 939
MaeIII GTNAC 3 cut(s) 110, 306, 935
MalI GATC 5 cut(s) 132, 533, 664, 1233, 1270
MboI GATC 5 cut(s) 130, 531, 662, 1231, 1268
MboII GAAGA 9 cut(s) 12, 703, 834, 899, 1055, 1058, 1143, 1259, 1359
MhlI GDGCHC 4 cut(s) 80, 648, 718, 876
MlsI TGGCCA 1 cut(s) 1118
MluCI AATT 9 cut(s) 82, 171, 222, 354, 391, 515, 680, 738, 796
MluNI TGGCCA 1 cut(s) 1118
MlyI GAGTC 1 cut(s) 628
Mox20I TGGCCA 1 cut(s) 1118
MroXI GAANNNNTTC 1 cut(s) 906
MscI TGGCCA 1 cut(s) 1118
MseI TTAA 2 cut(s) 974, 1055
MslI CAYNNNNRTG 5 cut(s) 232, 558, 762, 1100, 1361
Msp20I TGGCCA 1 cut(s) 1118
MspA1I CMGCKG 1 cut(s) 701
MspR9I CCNGG 3 cut(s) 90, 893, 1323
MvaI CCWGG 3 cut(s) 90, 893, 1323
MwoI GCNNNNNNNGC 8 cut(s) 141, 150, 423, 704, 707, 713, 1020, 1124
NcoI CCATGG 5 cut(s) 339, 628, 1038, 1182, 1217
NdeI CATATG 1 cut(s) 1372
NdeII GATC 5 cut(s) 130, 531, 662, 1231, 1268
NlaIV GGNNCC 2 cut(s) 337, 897
NmuCI GTSAC 2 cut(s) 110, 935
NspI RCATGY 2 cut(s) 1348, 1360
PaeI GCATGC 1 cut(s) 1348
PceI AGGCCT 1 cut(s) 1162
PciI ACATGT 1 cut(s) 1356
PdmI GAANNNNTTC 1 cut(s) 906
PfeI GAWTC 2 cut(s) 258, 858
PkrI GCNGC 3 cut(s) 700, 709, 775
Ple19I CGATCG 1 cut(s) 133
PleI GAGTC 1 cut(s) 628
PpsI GAGTC 1 cut(s) 628
PscI ACATGT 1 cut(s) 1356
Psp6I CCWGG 3 cut(s) 88, 891, 1321
PspGI CCWGG 3 cut(s) 88, 891, 1321
PspN4I GGNNCC 2 cut(s) 337, 897
PspPI GGNCC 3 cut(s) 381, 895, 1319
PstI CTGCAG 1 cut(s) 367
PvuI CGATCG 1 cut(s) 133
PvuII CAGCTG 1 cut(s) 701
RsaI GTAC 2 cut(s) 281, 1327
RsaNI GTAC 2 cut(s) 280, 1326
RseI CAYNNNNRTG 5 cut(s) 232, 558, 762, 1100, 1361
SaqAI TTAA 2 cut(s) 974, 1055
SatI GCNGC 3 cut(s) 699, 708, 774
Sau3AI GATC 5 cut(s) 130, 531, 662, 1231, 1268
Sau96I GGNCC 3 cut(s) 381, 895, 1319
ScaI AGTACT 1 cut(s) 281
SchI GAGTC 1 cut(s) 628
ScrFI CCNGG 3 cut(s) 90, 893, 1323
SduI GDGCHC 4 cut(s) 80, 648, 718, 876
SfaNI GCATC 4 cut(s) 162, 1001, 1032, 1222
SfcI CTRYAG 2 cut(s) 363, 867
SinI GGWCC 2 cut(s) 895, 1319
SmiMI CAYNNNNRTG 5 cut(s) 232, 558, 762, 1100, 1361
SpeI ACTAGT 1 cut(s) 607
SphI GCATGC 1 cut(s) 1348
Sse9I AATT 9 cut(s) 82, 171, 222, 354, 391, 515, 680, 738, 796
SseBI AGGCCT 1 cut(s) 1162
SspI AATATT 1 cut(s) 781
SspMI CTAG 4 cut(s) 608, 719, 1190, 1341
StuI AGGCCT 1 cut(s) 1162
StyD4I CCNGG 3 cut(s) 88, 891, 1321
StyI CCWWGG 5 cut(s) 339, 628, 1038, 1182, 1217
TaaI ACNGT 2 cut(s) 188, 868
TaiI ACGT 1 cut(s) 942
TaqI TCGA 1 cut(s) 760
TasI AATT 9 cut(s) 82, 171, 222, 354, 391, 515, 680, 738, 796
TatI WGTACW 1 cut(s) 279
TfiI GAWTC 2 cut(s) 258, 858
Tru1I TTAA 2 cut(s) 974, 1055
Tru9I TTAA 2 cut(s) 974, 1055
TscAI CASTG 2 cut(s) 504, 1339
TseFI GTSAC 2 cut(s) 110, 935
TseI GCWGC 3 cut(s) 698, 707, 773
Tsp45I GTSAC 2 cut(s) 110, 935
TspRI CASTG 2 cut(s) 504, 1339
VpaK11BI GGWCC 2 cut(s) 895, 1319
XapI RAATTY 3 cut(s) 82, 222, 354
XceI RCATGY 2 cut(s) 1348, 1360
XmiI GTMKAC 3 cut(s) 438, 448, 612
XmnI GAANNNNTTC 1 cut(s) 906
XspI CTAG 4 cut(s) 608, 719, 1190, 1341
ZrmI AGTACT 1 cut(s) 281
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.