RchiOBHm_Chr5g0054931

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000066
Physical Location & Seq
Forward (+)
57678179 .. 57679426
1248 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33199

Sequence Viewer

Length: 1143 bp
ATGGCTGTGCACGGGAGGATGCTAGTTATGCAACTGATCATAGCGGTGGCCATAGCAGCAGCAGCAGCTGATCGAACCCCACCTCCTCAAGCGCGACCTAACTGCTCCGACCACTGTGGTAATCTCAAAATCCCATATCCTTTCGGCATCGGGCAGGGTTGTTCCCAGCGAGGATGGTTCAACCTCACTTGTAACGAATCCACCGAACCCCCAACAACACTCTGGGGCGATGGTAGTTTAACGGTTACTAACATATCGCTTGCTGAAGGTGAATTGAAGGTTATGATTTACAGAGCCCGTGATTGTTATGATCAGCAGGGTAATCAAACAAAAGAAATGTACACGGCCGCTTCTCTCCGGTTGCCTCCTCCTTTCACCATCTCCGGGACCAGAAACAAGTTGATTGCCGTTGGCTGCGACACTATTTCAATTTTCAGAGGGTACCGCCCTTACCCTCATGACAAAGACAGGTACATCACCGGATGCATTTCTGTATGTGACAATCTTGACAATGCAGTTAACGGTTCGTGCTCCGGCATTGGGTGTTGCCAAACTTCCATCCCTAGTGGACTCAAAAATCTCACAGTGAGTTTGAATAGCGACTCTCAACATAAGGACGTATGGAAATTCAACCCATGCAGCTACGCCTTCATTGTGGAAGAAGAATATTTCACATTCAACCCTAAAACAAGTTTTGAAGAACTCAACAACACTGAAAAACTTCCCATGATTATTAACTGGGATATTAATGAAGGGTCATGTGCTCTAGCTCAAAACAGCGATGGTTATGCTTGCAAAGCAAATAGCAGCTGTGTCAATCGGACCGTCGATTACCAGACTGAACCAACTGGTTATTATTGCCAGTGCTTGCCAGGCTTCGAAGGGAACCCATATCTTCCAGATGGTTGCCGAGATATTGACGAGTGCATGGCTCCATCAAGTCCCTGCAACAATGGAATATGCCAAAATTCACCTGGAGGTTACAGCTGTTTATGTAACAAAGGTTTCAAAAACCAGGACTCAAAGAATTGCATAGAAAACACTCCCGTGCCAAAGAACATGCCCCTGAAAATTTTGTTGGGTATGTATAAGCTACCTTATTACTTATCTACTTACGCTAAGCAGCTAACCATGCATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK cEGF

Protein Analysis

380

Amino Acids

41.85

Weight (kDa)

5.79

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 35 - 94 1.5e-13 Wall-associated receptor kinase galacturonan-binding
WAK PF08488 175 - 239 8.8e-06 Wall-associated kinase
EGF_CA PF07645 305 - 344 2.4e-09 Calcium-binding EGF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 441
AccB1I GGYRCC 1 cut(s) 441
AccII CGCG 1 cut(s) 94
AciI CCGC 3 cut(s) 44, 348, 445
AcoI YGGCCR 2 cut(s) 48, 345
AcsI RAATTY 3 cut(s) 626, 967, 1071
AcuI CTGAAG 1 cut(s) 285
AfaI GTAC 3 cut(s) 341, 443, 473
AfiI CCNNNNNNNGG 2 cut(s) 384, 540
AgsI TTSAA 8 cut(s) 181, 277, 429, 595, 631, 679, 698, 1009
AjnI CCWGG 3 cut(s) 871, 973, 1014
AjuI GAANNNNNNNTTGG 2 cut(s) 1061, 1093
AleI CACNNNNGTG 1 cut(s) 1046
AloI GAACNNNNNNTCC 2 cut(s) 67, 99
AluBI AGCT 7 cut(s) 68, 642, 770, 810, 987, 1093, 1126
AluI AGCT 7 cut(s) 68, 642, 770, 810, 987, 1093, 1126
Alw21I GWGCWC 3 cut(s) 12, 533, 766
Alw44I GTGCAC 1 cut(s) 8
AlwNI CAGNNNCTG 1 cut(s) 68
AoxI GGCC 2 cut(s) 48, 345
ApaLI GTGCAC 1 cut(s) 8
ApeKI GCWGC 8 cut(s) 56, 59, 62, 65, 414, 639, 807, 1123
ApoI RAATTY 3 cut(s) 626, 967, 1071
AseI ATTAAT 1 cut(s) 747
Asp700I GAANNNNTTC 1 cut(s) 720
Asp718I GGTACC 1 cut(s) 441
AspLEI GCGC 1 cut(s) 94
AspS9I GGNCC 2 cut(s) 387, 822
AsuC2I CCSGG 1 cut(s) 385
AsuHPI GGTGA 4 cut(s) 281, 367, 469, 963
AsuII TTCGAA 1 cut(s) 879
AvaII GGWCC 2 cut(s) 387, 822
BaeGI GKGCMC 1 cut(s) 12
BalI TGGCCA 1 cut(s) 50
BanI GGYRCC 1 cut(s) 441
BanII GRGCYC 1 cut(s) 298
Bbv12I GWGCWC 3 cut(s) 12, 533, 766
BbvI GCAGC 8 cut(s) 68, 71, 74, 77, 401, 651, 819, 1135
BccI CCATC 7 cut(s) 168, 224, 386, 566, 776, 896, 943
BceAI ACGGC 2 cut(s) 360, 392
BcgI CGANNNNNNTGC 4 cut(s) 84, 118, 770, 804
BciT130I CCWGG 3 cut(s) 873, 975, 1016
BclI TGATCA 2 cut(s) 36, 310
BcnI CCSGG 1 cut(s) 385
BfaI CTAG 3 cut(s) 23, 564, 767
BisI GCNGC 9 cut(s) 57, 60, 63, 66, 348, 415, 640, 808, 1124
BlpI GCTNAGC 1 cut(s) 1119
BlsI GCNGC 9 cut(s) 58, 61, 64, 67, 349, 416, 641, 809, 1125
Bme1390I CCNGG 4 cut(s) 385, 873, 975, 1016
Bme18I GGWCC 2 cut(s) 387, 822
BmgT120I GGNCC 2 cut(s) 387, 822
BmiI GGNNCC 4 cut(s) 388, 443, 887, 933
BmrFI CCNGG 4 cut(s) 385, 873, 975, 1016
BmrI ACTGGG 1 cut(s) 748
BmsI GCATC 3 cut(s) 9, 156, 473
BmuI ACTGGG 1 cut(s) 748
BpmI CTGGAG 1 cut(s) 996
Bpu1102I GCTNAGC 1 cut(s) 1119
Bpu14I TTCGAA 1 cut(s) 879
BpuEI CTTGAG 1 cut(s) 72
BpuMI CCSGG 1 cut(s) 385
BsaWI WCCGGW 2 cut(s) 357, 479
BsaXI ACNNNNNCTCC 2 cut(s) 67, 97
Bsc4I CCNNNNNNNGG 2 cut(s) 384, 540
Bse1I ACTGG 3 cut(s) 743, 853, 862
BseBI CCWGG 3 cut(s) 873, 975, 1016
BseGI GGATG 4 cut(s) 24, 179, 488, 558
BseLI CCNNNNNNNGG 2 cut(s) 384, 540
BseNI ACTGG 3 cut(s) 743, 853, 862
BseRI GAGGAG 2 cut(s) 75, 357
BseSI GKGCMC 1 cut(s) 12
BseX3I CGGCCG 1 cut(s) 345
BseXI GCAGC 8 cut(s) 68, 71, 74, 77, 401, 651, 819, 1135
BseYI CCCAGC 1 cut(s) 165
Bsh1236I CGCG 1 cut(s) 94
Bsh1285I CGRYCG 1 cut(s) 348
BshFI GGCC 2 cut(s) 50, 347
BshNI GGYRCC 1 cut(s) 441
BsiEI CGRYCG 1 cut(s) 348
BsiHKAI GWGCWC 3 cut(s) 12, 533, 766
BsiSI CCGG 4 cut(s) 358, 384, 480, 534
BslFI GGGAC 2 cut(s) 400, 927
BslI CCNNNNNNNGG 2 cut(s) 384, 540
BsmFI GGGAC 2 cut(s) 400, 927
BsnI GGCC 2 cut(s) 50, 347
Bsp119I TTCGAA 1 cut(s) 879
Bsp1286I GDGCHC 4 cut(s) 12, 298, 533, 766
Bsp1407I TGTACA 1 cut(s) 339
Bsp143I GATC 3 cut(s) 36, 70, 310
Bsp1720I GCTNAGC 1 cut(s) 1119
BspACI CCGC 3 cut(s) 44, 348, 445
BspANI GGCC 2 cut(s) 50, 347
BspFNI CGCG 1 cut(s) 94
BspHI TCATGA 1 cut(s) 457
BspLI GGNNCC 4 cut(s) 388, 443, 887, 933
BspT104I TTCGAA 1 cut(s) 879
BspT107I GGYRCC 1 cut(s) 441
BsrGI TGTACA 1 cut(s) 339
BsrI ACTGG 3 cut(s) 743, 853, 862
BssMI GATC 3 cut(s) 36, 70, 310
Bst2UI CCWGG 3 cut(s) 873, 975, 1016
Bst4CI ACNGT 5 cut(s) 116, 244, 524, 586, 826
BstAUI TGTACA 1 cut(s) 339
BstBI TTCGAA 1 cut(s) 879
BstC8I GCNNGC 3 cut(s) 261, 793, 869
BstDEI CTNAG 1 cut(s) 1119
BstF5I GGATG 4 cut(s) 24, 179, 488, 558
BstFNI CGCG 1 cut(s) 94
BstHHI GCGC 1 cut(s) 94
BstKTI GATC 3 cut(s) 39, 73, 313
BstMBI GATC 3 cut(s) 36, 70, 310
BstMCI CGRYCG 1 cut(s) 348
BstMWI GCNNNNNNNGC 7 cut(s) 28, 56, 62, 65, 797, 873, 1132
BstNI CCWGG 3 cut(s) 873, 975, 1016
BstNSI RCATGY 1 cut(s) 1063
BstSCI CCNGG 4 cut(s) 383, 871, 973, 1014
BstSLI GKGCMC 1 cut(s) 12
BstUI CGCG 1 cut(s) 94
BstV1I GCAGC 8 cut(s) 68, 71, 74, 77, 401, 651, 819, 1135
BstZI CGGCCG 1 cut(s) 345
BsuRI GGCC 2 cut(s) 50, 347
BtgZI GCGATG 2 cut(s) 243, 795
BtsCI GGATG 4 cut(s) 24, 179, 488, 558
BtsIMutI CAGTG 4 cut(s) 112, 591, 711, 869
Cac8I GCNNGC 3 cut(s) 261, 793, 869
CaiI CAGNNNCTG 1 cut(s) 68
CciI TCATGA 1 cut(s) 457
CfoI GCGC 1 cut(s) 94
Cfr13I GGNCC 2 cut(s) 387, 822
CpoI CGGWCCG 1 cut(s) 822
Csp6I GTAC 3 cut(s) 340, 442, 472
CspI CGGWCCG 1 cut(s) 822
CviAII CATG 7 cut(s) 458, 636, 727, 759, 928, 1060, 1132
CviQI GTAC 3 cut(s) 340, 442, 472
DdeI CTNAG 1 cut(s) 1119
DpnI GATC 3 cut(s) 38, 72, 312
DpnII GATC 3 cut(s) 36, 70, 310
EaeI YGGCCR 2 cut(s) 48, 345
EagI CGGCCG 1 cut(s) 345
EclXI CGGCCG 1 cut(s) 345
Eco24I GRGCYC 1 cut(s) 298
Eco47I GGWCC 2 cut(s) 387, 822
Eco52I CGGCCG 1 cut(s) 345
Eco57I CTGAAG 1 cut(s) 285
EcoRII CCWGG 3 cut(s) 871, 973, 1014
EcoT22I ATGCAT 2 cut(s) 488, 1137
EcoT38I GRGCYC 1 cut(s) 298
FaeI CATG 7 cut(s) 461, 639, 730, 762, 931, 1063, 1135
FaqI GGGAC 2 cut(s) 400, 927
FatI CATG 7 cut(s) 457, 635, 726, 758, 927, 1059, 1131
FbaI TGATCA 2 cut(s) 36, 310
Fnu4HI GCNGC 9 cut(s) 57, 60, 63, 66, 348, 415, 640, 808, 1124
FokI GGATG 4 cut(s) 31, 186, 495, 545
FriOI GRGCYC 1 cut(s) 298
Fsp4HI GCNGC 9 cut(s) 57, 60, 63, 66, 348, 415, 640, 808, 1124
FspBI CTAG 3 cut(s) 23, 564, 767
GlaI GCGC 1 cut(s) 93
GluI GCNGC 9 cut(s) 57, 60, 63, 66, 348, 415, 640, 808, 1124
GsaI CCCAGC 1 cut(s) 169
GsuI CTGGAG 1 cut(s) 996
HaeIII GGCC 2 cut(s) 50, 347
HapII CCGG 4 cut(s) 358, 384, 480, 534
HhaI GCGC 1 cut(s) 94
Hin1II CATG 7 cut(s) 461, 639, 730, 762, 931, 1063, 1135
Hin6I GCGC 1 cut(s) 92
HinP1I GCGC 1 cut(s) 92
HincII GTYRAC 1 cut(s) 520
HindII GTYRAC 1 cut(s) 520
HinfI GANTC 4 cut(s) 197, 570, 602, 1019
HpaI GTTAAC 1 cut(s) 520
HpaII CCGG 4 cut(s) 358, 384, 480, 534
HphI GGTGA 4 cut(s) 281, 367, 469, 963
Hpy166II GTNNAC 4 cut(s) 10, 342, 520, 569
Hpy188I TCNGA 3 cut(s) 109, 437, 822
Hpy188III TCNNGA 3 cut(s) 458, 506, 899
Hpy8I GTNNAC 4 cut(s) 10, 342, 520, 569
Hpy99I CGWCG 1 cut(s) 830
HpyAV CCTTC 5 cut(s) 260, 271, 658, 746, 875
HpyCH4III ACNGT 5 cut(s) 116, 244, 524, 586, 826
HpyCH4IV ACGT 1 cut(s) 618
HpyF10VI GCNNNNNNNGC 7 cut(s) 28, 56, 62, 65, 797, 873, 1132
HpyF3I CTNAG 1 cut(s) 1119
HpySE526I ACGT 1 cut(s) 618
Hsp92II CATG 7 cut(s) 461, 639, 730, 762, 931, 1063, 1135
HspAI GCGC 1 cut(s) 92
KpnI GGTACC 1 cut(s) 445
Ksp22I TGATCA 2 cut(s) 36, 310
KspAI GTTAAC 1 cut(s) 520
Kzo9I GATC 3 cut(s) 36, 70, 310
LmnI GCTCC 3 cut(s) 110, 536, 937
Lsp1109I GCAGC 8 cut(s) 68, 71, 74, 77, 401, 651, 819, 1135
LweI GCATC 3 cut(s) 9, 156, 473
MaeI CTAG 3 cut(s) 23, 564, 767
MaeII ACGT 1 cut(s) 618
MaeIII GTNAC 5 cut(s) 191, 244, 497, 980, 995
MalI GATC 3 cut(s) 38, 72, 312
MboI GATC 3 cut(s) 36, 70, 310
MboII GAAGA 4 cut(s) 671, 674, 710, 887
MhlI GDGCHC 4 cut(s) 12, 298, 533, 766
MlsI TGGCCA 1 cut(s) 50
MluCI AATT 6 cut(s) 272, 429, 626, 967, 1027, 1071
MluNI TGGCCA 1 cut(s) 50
MlyI GAGTC 3 cut(s) 564, 596, 1013
MmeI TCCRAC 1 cut(s) 132
Mox20I TGGCCA 1 cut(s) 50
Mph1103I ATGCAT 2 cut(s) 488, 1137
MroXI GAANNNNTTC 1 cut(s) 720
MscI TGGCCA 1 cut(s) 50
MseI TTAA 4 cut(s) 239, 519, 735, 747
MslI CAYNNNNRTG 2 cut(s) 44, 1046
Msp20I TGGCCA 1 cut(s) 50
MspA1I CMGCKG 3 cut(s) 68, 810, 987
MspI CCGG 4 cut(s) 358, 384, 480, 534
MspR9I CCNGG 4 cut(s) 385, 873, 975, 1016
MvaI CCWGG 3 cut(s) 873, 975, 1016
MvnI CGCG 1 cut(s) 94
MwoI GCNNNNNNNGC 7 cut(s) 28, 56, 62, 65, 797, 873, 1132
NciI CCSGG 1 cut(s) 385
NdeII GATC 3 cut(s) 36, 70, 310
NlaIII CATG 7 cut(s) 461, 639, 730, 762, 931, 1063, 1135
NlaIV GGNNCC 4 cut(s) 388, 443, 887, 933
NmeAIII GCCGAG 1 cut(s) 935
NmuCI GTSAC 1 cut(s) 497
NsiI ATGCAT 2 cut(s) 488, 1137
NspI RCATGY 1 cut(s) 1063
NspV TTCGAA 1 cut(s) 879
OliI CACNNNNGTG 1 cut(s) 1046
PagI TCATGA 1 cut(s) 457
PcsI WCGNNNNNNNCGW 1 cut(s) 201
PdmI GAANNNNTTC 1 cut(s) 720
PfeI GAWTC 1 cut(s) 197
PfoI TCCNGGA 1 cut(s) 383
PkrI GCNGC 9 cut(s) 58, 61, 64, 67, 349, 416, 641, 809, 1125
PleI GAGTC 3 cut(s) 564, 596, 1013
PpsI GAGTC 3 cut(s) 564, 596, 1013
PshBI ATTAAT 1 cut(s) 747
Psp6I CCWGG 3 cut(s) 871, 973, 1014
PspFI CCCAGC 1 cut(s) 165
PspGI CCWGG 3 cut(s) 871, 973, 1014
PspN4I GGNNCC 4 cut(s) 388, 443, 887, 933
PspPI GGNCC 2 cut(s) 387, 822
PstNI CAGNNNCTG 1 cut(s) 68
PvuII CAGCTG 3 cut(s) 68, 810, 987
RsaI GTAC 3 cut(s) 341, 443, 473
RsaNI GTAC 3 cut(s) 340, 442, 472
RseI CAYNNNNRTG 2 cut(s) 44, 1046
Rsr2I CGGWCCG 1 cut(s) 822
RsrII CGGWCCG 1 cut(s) 822
SaqAI TTAA 4 cut(s) 239, 519, 735, 747
SatI GCNGC 9 cut(s) 57, 60, 63, 66, 348, 415, 640, 808, 1124
Sau3AI GATC 3 cut(s) 36, 70, 310
Sau96I GGNCC 2 cut(s) 387, 822
SchI GAGTC 3 cut(s) 564, 596, 1013
ScrFI CCNGG 4 cut(s) 385, 873, 975, 1016
SduI GDGCHC 4 cut(s) 12, 298, 533, 766
SfaNI GCATC 3 cut(s) 9, 156, 473
SfuI TTCGAA 1 cut(s) 879
SinI GGWCC 2 cut(s) 387, 822
SmiMI CAYNNNNRTG 2 cut(s) 44, 1046
SmlI CTYRAG 1 cut(s) 87
SmoI CTYRAG 1 cut(s) 87
Sse9I AATT 6 cut(s) 272, 429, 626, 967, 1027, 1071
SsiI CCGC 3 cut(s) 44, 348, 445
SspI AATATT 1 cut(s) 668
SspMI CTAG 3 cut(s) 23, 564, 767
StyD4I CCNGG 4 cut(s) 383, 871, 973, 1014
TaaI ACNGT 5 cut(s) 116, 244, 524, 586, 826
TaiI ACGT 1 cut(s) 621
TaqI TCGA 3 cut(s) 73, 828, 879
TasI AATT 6 cut(s) 272, 429, 626, 967, 1027, 1071
TatI WGTACW 1 cut(s) 339
TauI GCSGC 1 cut(s) 350
TfiI GAWTC 1 cut(s) 197
Tru1I TTAA 4 cut(s) 239, 519, 735, 747
Tru9I TTAA 4 cut(s) 239, 519, 735, 747
TscAI CASTG 4 cut(s) 119, 591, 718, 869
TseFI GTSAC 1 cut(s) 497
TseI GCWGC 8 cut(s) 56, 59, 62, 65, 414, 639, 807, 1123
Tsp45I GTSAC 1 cut(s) 497
TspDTI ATGAA 2 cut(s) 640, 765
TspRI CASTG 4 cut(s) 119, 591, 718, 869
VneI GTGCAC 1 cut(s) 8
VpaK11BI GGWCC 2 cut(s) 387, 822
VspI ATTAAT 1 cut(s) 747
XapI RAATTY 3 cut(s) 626, 967, 1071
XceI RCATGY 1 cut(s) 1063
XcmI CCANNNNNNNNNTGG 2 cut(s) 219, 971
XmnI GAANNNNTTC 1 cut(s) 720
XspI CTAG 3 cut(s) 23, 564, 767
Zsp2I ATGCAT 2 cut(s) 488, 1137
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.