Rmu_sc0005223.1_g000008

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005223.1
OG0000066
Physical Location & Seq
Forward (+)
19861 .. 22663
2803 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005223.1_g000008.1.cds

Sequence Viewer

Length: 2361 bp
atgctagtaatgcgattcatgatgttctcattggtagtggccgcgatagcagtagcgactgatcaagccctgcctcctcaagctcttcccgactgcgatgaccactgtggtaatatcacagtcccatatcctttcggcataggggacggttgttaccgtcaagaaatgttcaggttcaacctcacctgtgacaaaaccgcccaacccccaatgctactcttgtcggatggtggtctcaacgctactaacatattccttgctgaaggtgagttgcaaattttgagttacatagcccatgattgttatgatgaacagggtaatcaaacaaaaagcatgtacaatgaccctcaactctggctggctcctccgttcaccatctctgggaccagaaacaaattcatggccgtcggatgtgacacttatgccattttcaaagggtaccgaccttccccaaatgatgaagataggtacatagccgggtgcatgtccataagtgacaatcttgatagtgctgttaacgagtcatgctccggcattgggtgctgccagacttctatccccaacggactcaaaaatcgttctatcatattggatagctacttcaaccacacatacgtatggagtttcaacccgtgcagttatgccttcattgtggaagaaggcaagttcacattcaaccgtagaacaagttttcaagaactgaacaacaccgaaaagcttcccatgattcttaattgggaaattgatgatgggccatgtgctgaagctcaaaagaggccggattacgcatgcaaagcaaatagcaagtgtgtgaacagaaccatcgacatccagactgaaccatctggttacttttgccagtgcttgctaggcttcgaagggaacccatatctcccagatggttgccgagatattgatgagtgcctggcttcaataaaaccctgcaacaatggaacgtgcaaaaatttagatggaagttacttttgtttatgcaacaaaggtttcagcaacgacaccgccacaagttgcataccaatcattcccgtatcaaagaacaagtccctgaaaatttggttgggtgtctgtttaggctttttgggattagtagttgcaatatcatggattcattgtataatgaacagaagaaagctcatcaaactcaaaaagaagtactttaaagaaaatggcggcttaacattacaacaacacctcgctcgccatggaggaggtgtagaaacaacaaaaatctttgctgcagaagaacttgagaaggccacaaacaattaccatcaaagtagagtcattggtgaaggaggctatggaactgtttacaaaggaatattactagataacagagtggtcgccataaaaaaatccaaagtttgtgcacgaactcaaagtgatcagttcgttaatgaggttatatttctttctcagatcaaccacagaaatgtagtcaaacttctaggttgttgttttgagacgcaagtgcctttactagtatatgagtacatcgcccatggaactctttttgagcatgtgttcaactgtataaaggggagaggatcatcactttcatgggagttacgattgaagatagcatcagaaactgcagaagcactagcatacttacactcttccacttcaacaccaatcgtacaccgcgatgtgaaagcaacaaatatactattggatcaaaattacacagctaaagtatcagattttggagcttcacgtttcattcctctagatcaaactgaagtagctacattagtgcaagggacaatgggatacttagaccctgagtatctacaatcaaatacccttacagaaaagagtgacgtctacagctttggagtcgtcctagcagagctactaacgagcaaggtggcaatttcttttgctaggtctgaggaagacagaagcctagcaagtttgtttatttcctcaatggcaaaaaagtgcttgattcatattcttgatgctgacatagtgaatgaaggaaatattgagacacttgagcaagtggcgattctggcgaaacgatgtttggaggtgaaaggggaggaaagaccaactatgaaggaagtggccacggagttagaaggaatgagaattgcatcaaagcatccatggaaaaatgctgatttctatccagaggagactcagtacttgctggggtctcctaattcaaaggcttctgttgtgaacggtagaggtgaaggtgacggtgattttggtggcacaagtagtgggtttgacagcatccaaattgaaacgttagtgccatacaatggaacaaccggtgggtttgacagcatgcaagttcaaacgttaatgccatacgataacgggagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

786

Amino Acids

87.1

Weight (kDa)

5.49

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1845
Acc65I GGTACC 1 cut(s) 438
AccB1I GGYRCC 1 cut(s) 438
AccB7I CCANNNNNTGG 1 cut(s) 2294
AccI GTMKAC 1 cut(s) 1845
AccII CGCG 2 cut(s) 44, 1665
AciI CCGC 5 cut(s) 42, 198, 1017, 1188, 1663
AclI AACGTT 2 cut(s) 2279, 2333
AclWI GGATC 2 cut(s) 1573, 1701
AcoI YGGCCR 3 cut(s) 39, 402, 2091
AcsI RAATTY 4 cut(s) 276, 395, 964, 1068
AcuI CTGAAG 3 cut(s) 282, 783, 1779
AcyI GRCGYC 1 cut(s) 1842
AfaI GTAC 7 cut(s) 338, 440, 470, 1172, 1511, 1659, 2171
AfiI CCNNNNNNNGG 3 cut(s) 381, 537, 2294
AgeI ACCGGT 1 cut(s) 2303
AhlI ACTAGT 1 cut(s) 1498
AjnI CCWGG 1 cut(s) 924
AjuI GAANNNNNNNTTGG 4 cut(s) 1058, 1090, 2033, 2065
Alw21I GWGCWC 1 cut(s) 1390
Alw26I GTCTC 5 cut(s) 239, 1475, 2006, 2156, 2187
Alw44I GTGCAC 1 cut(s) 1386
AlwI GGATC 2 cut(s) 1573, 1701
AlwNI CAGNNNCTG 1 cut(s) 1610
AoxI GGCC 6 cut(s) 39, 402, 752, 776, 1272, 2091
ApaLI GTGCAC 1 cut(s) 1386
ApeKI GCWGC 2 cut(s) 543, 1253
ApoI RAATTY 4 cut(s) 276, 395, 964, 1068
ArsI GACNNNNNNTTYG 4 cut(s) 1043, 1075, 2219, 2251
AsiGI ACCGGT 1 cut(s) 2303
Asp700I GAANNNNTTC 1 cut(s) 717
Asp718I GGTACC 1 cut(s) 438
AspS9I GGNCC 2 cut(s) 384, 752
AsuC2I CCSGG 1 cut(s) 478
AsuHPI GGTGA 8 cut(s) 175, 278, 364, 1319, 2068, 2231, 2237, 2243
AsuII TTCGAA 1 cut(s) 876
AvaII GGWCC 1 cut(s) 384
BaeGI GKGCMC 1 cut(s) 1390
BalI TGGCCA 1 cut(s) 2093
BanI GGYRCC 1 cut(s) 438
BarI GAAGNNNNNNTAC 2 cut(s) 1446, 1478
BbsI GAAGAC 1 cut(s) 1923
Bbv12I GWGCWC 1 cut(s) 1390
BbvI GCAGC 2 cut(s) 530, 1240
BccI CCATC 8 cut(s) 221, 383, 743, 830, 850, 893, 965, 1296
BceAI ACGGC 1 cut(s) 389
BciT130I CCWGG 1 cut(s) 926
BciVI GTATCC 1 cut(s) 1784
BclI TGATCA 2 cut(s) 61, 1402
BcnI CCSGG 1 cut(s) 478
BcoDI GTCTC 5 cut(s) 239, 1475, 2006, 2156, 2187
BcuI ACTAGT 1 cut(s) 1498
BfmI CTRYAG 3 cut(s) 1254, 1611, 1846
BfuI GTATCC 1 cut(s) 1784
BisI GCNGC 4 cut(s) 42, 544, 1189, 1254
BlsI GCNGC 4 cut(s) 43, 545, 1190, 1255
BmcAI AGTACT 2 cut(s) 1172, 2171
Bme1390I CCNGG 2 cut(s) 478, 926
Bme18I GGWCC 1 cut(s) 384
BmgT120I GGNCC 2 cut(s) 384, 752
BmiI GGNNCC 4 cut(s) 363, 385, 440, 884
BmrFI CCNGG 2 cut(s) 478, 926
BmsI GCATC 5 cut(s) 1610, 1972, 2129, 2137, 2274
BpiI GAAGAC 1 cut(s) 1923
BplI GAGNNNNNCTC 2 cut(s) 512, 544
Bpu14I TTCGAA 1 cut(s) 876
BpuEI CTTGAG 3 cut(s) 63, 1286, 2039
BpuMI CCSGG 1 cut(s) 478
BsaAI YACGTR 1 cut(s) 616
BsaBI GATNNNNATC 1 cut(s) 2151
BsaHI GRCGYC 1 cut(s) 1842
BsaI GGTCTC 2 cut(s) 239, 2187
BsaJI CCNNGG 4 cut(s) 1219, 1519, 2094, 2132
BsaWI WCCGGW 1 cut(s) 2303
BsaXI ACNNNNNCTCC 4 cut(s) 1215, 1245, 2153, 2183
Bsc4I CCNNNNNNNGG 3 cut(s) 381, 537, 2294
Bse118I RCCGGY 1 cut(s) 2303
Bse1I ACTGG 1 cut(s) 859
Bse8I GATNNNNATC 1 cut(s) 2151
BseBI CCWGG 1 cut(s) 926
BseDI CCNNGG 4 cut(s) 1219, 1519, 2094, 2132
BseGI GGATG 5 cut(s) 232, 416, 828, 2128, 2265
BseJI GATNNNNATC 1 cut(s) 2151
BseLI CCNNNNNNNGG 3 cut(s) 381, 537, 2294
BseMII CTCAG 4 cut(s) 1448, 1794, 1902, 2180
BseNI ACTGG 1 cut(s) 859
BseRI GAGGAG 4 cut(s) 66, 354, 1239, 2174
BseSI GKGCMC 1 cut(s) 1390
BseXI GCAGC 2 cut(s) 530, 1240
BseYI CCCAGC 1 cut(s) 2176
BsgI GTGCAG 1 cut(s) 655
Bsh1236I CGCG 2 cut(s) 44, 1665
BshFI GGCC 6 cut(s) 41, 404, 754, 778, 1274, 2093
BshNI GGYRCC 1 cut(s) 438
BshTI ACCGGT 1 cut(s) 2303
BsiHKAI GWGCWC 1 cut(s) 1390
BsiSI CCGG 4 cut(s) 477, 531, 779, 2304
BslFI GGGAC 5 cut(s) 107, 158, 397, 1045, 1795
BslI CCNNNNNNNGG 3 cut(s) 381, 537, 2294
BsmAI GTCTC 5 cut(s) 239, 1475, 2006, 2156, 2187
BsmBI CGTCTC 1 cut(s) 1475
BsmFI GGGAC 5 cut(s) 107, 158, 397, 1045, 1795
BsnI GGCC 6 cut(s) 41, 404, 754, 778, 1274, 2093
Bso31I GGTCTC 2 cut(s) 239, 2187
Bsp119I TTCGAA 1 cut(s) 876
Bsp1286I GDGCHC 1 cut(s) 1390
Bsp1407I TGTACA 1 cut(s) 336
Bsp143I GATC 6 cut(s) 61, 1402, 1437, 1565, 1693, 1750
Bsp19I CCATGG 3 cut(s) 1219, 1519, 2132
BspACI CCGC 5 cut(s) 42, 198, 1017, 1188, 1663
BspANI GGCC 6 cut(s) 41, 404, 754, 778, 1274, 2093
BspCNI CTCAG 4 cut(s) 1447, 1795, 1903, 2179
BspFNI CGCG 2 cut(s) 44, 1665
BspHI TCATGA 1 cut(s) 18
BspLI GGNNCC 4 cut(s) 363, 385, 440, 884
BspMAI CTGCAG 2 cut(s) 1258, 1615
BspPI GGATC 2 cut(s) 1573, 1701
BspQI GCTCTTC 1 cut(s) 90
BspT104I TTCGAA 1 cut(s) 876
BspT107I GGYRCC 1 cut(s) 438
BspTNI GGTCTC 2 cut(s) 239, 2187
BsrFI RCCGGY 1 cut(s) 2303
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 1 cut(s) 859
BssAI RCCGGY 1 cut(s) 2303
BssECI CCNNGG 4 cut(s) 1219, 1519, 2094, 2132
BssMI GATC 6 cut(s) 61, 1402, 1437, 1565, 1693, 1750
BssNI GRCGYC 1 cut(s) 1842
BssT1I CCWWGG 3 cut(s) 1219, 1519, 2132
Bst2UI CCWGG 1 cut(s) 926
Bst4CI ACNGT 9 cut(s) 107, 121, 149, 158, 680, 1327, 1550, 2213, 2231
Bst6I CTCTTC 2 cut(s) 90, 1642
BstACI GRCGYC 1 cut(s) 1842
BstAPI GCANNNNNTGC 1 cut(s) 540
BstAUI TGTACA 1 cut(s) 336
BstBAI YACGTR 1 cut(s) 616
BstBI TTCGAA 1 cut(s) 876
BstC8I GCNNGC 5 cut(s) 360, 790, 866, 1216, 2321
BstDEI CTNAG 5 cut(s) 1434, 1795, 1803, 1911, 2166
BstDSI CCRYGG 4 cut(s) 1219, 1519, 2094, 2132
BstF5I GGATG 5 cut(s) 232, 416, 828, 2128, 2265
BstFNI CGCG 2 cut(s) 44, 1665
BstKTI GATC 6 cut(s) 64, 1405, 1440, 1568, 1696, 1753
BstMAI GTCTC 5 cut(s) 239, 1475, 2006, 2156, 2187
BstMBI GATC 6 cut(s) 61, 1402, 1437, 1565, 1693, 1750
BstMWI GCNNNNNNNGC 6 cut(s) 10, 47, 540, 794, 870, 2036
BstNI CCWGG 1 cut(s) 926
BstNSI RCATGY 5 cut(s) 337, 487, 792, 1541, 2323
BstSCI CCNGG 2 cut(s) 476, 924
BstSFI CTRYAG 3 cut(s) 1254, 1611, 1846
BstSLI GKGCMC 1 cut(s) 1390
BstSNI TACGTA 1 cut(s) 616
BstUI CGCG 2 cut(s) 44, 1665
BstV1I GCAGC 2 cut(s) 530, 1240
BstV2I GAAGAC 1 cut(s) 1923
BsuI GTATCC 1 cut(s) 1784
BsuRI GGCC 6 cut(s) 41, 404, 754, 778, 1274, 2093
BtgI CCRYGG 4 cut(s) 1219, 1519, 2094, 2132
BtgZI GCGATG 3 cut(s) 111, 1498, 1680
BtsCI GGATG 5 cut(s) 232, 416, 828, 2128, 2265
BtsIMutI CAGTG 2 cut(s) 103, 866
Cac8I GCNNGC 5 cut(s) 360, 790, 866, 1216, 2321
CaiI CAGNNNCTG 1 cut(s) 1610
CciI TCATGA 1 cut(s) 18
Cfr10I RCCGGY 1 cut(s) 2303
Cfr13I GGNCC 2 cut(s) 384, 752
CseI GACGC 1 cut(s) 1492
Csp6I GTAC 7 cut(s) 337, 439, 469, 1171, 1510, 1658, 2170
CspAI ACCGGT 1 cut(s) 2303
CviQI GTAC 7 cut(s) 337, 439, 469, 1171, 1510, 1658, 2170
DdeI CTNAG 5 cut(s) 1434, 1795, 1803, 1911, 2166
DpnI GATC 6 cut(s) 63, 1404, 1439, 1567, 1695, 1752
DpnII GATC 6 cut(s) 61, 1402, 1437, 1565, 1693, 1750
DraI TTTAAA 1 cut(s) 1177
EaeI YGGCCR 3 cut(s) 39, 402, 2091
Eam1104I CTCTTC 2 cut(s) 90, 1642
EarI CTCTTC 2 cut(s) 90, 1642
Eco105I TACGTA 1 cut(s) 616
Eco130I CCWWGG 3 cut(s) 1219, 1519, 2132
Eco31I GGTCTC 2 cut(s) 239, 2187
Eco47I GGWCC 1 cut(s) 384
Eco57I CTGAAG 3 cut(s) 282, 783, 1779
EcoRII CCWGG 1 cut(s) 924
EcoT14I CCWWGG 3 cut(s) 1219, 1519, 2132
ErhI CCWWGG 3 cut(s) 1219, 1519, 2132
Esp3I CGTCTC 1 cut(s) 1475
FalI AAGNNNNNCTT 2 cut(s) 1157, 1189
FaqI GGGAC 5 cut(s) 107, 158, 397, 1045, 1795
FbaI TGATCA 2 cut(s) 61, 1402
FblI GTMKAC 1 cut(s) 1845
Fnu4HI GCNGC 4 cut(s) 42, 544, 1189, 1254
FokI GGATG 5 cut(s) 239, 423, 815, 2115, 2252
Fsp4HI GCNGC 4 cut(s) 42, 544, 1189, 1254
GluI GCNGC 4 cut(s) 42, 544, 1189, 1254
GsaI CCCAGC 1 cut(s) 2180
HaeIII GGCC 6 cut(s) 41, 404, 754, 778, 1274, 2093
HapII CCGG 4 cut(s) 477, 531, 779, 2304
HgaI GACGC 1 cut(s) 1492
Hin1I GRCGYC 1 cut(s) 1842
HincII GTYRAC 1 cut(s) 517
HindII GTYRAC 1 cut(s) 517
HindIII AAGCTT 1 cut(s) 716
HpaI GTTAAC 1 cut(s) 517
HpaII CCGG 4 cut(s) 477, 531, 779, 2304
HphI GGTGA 8 cut(s) 175, 278, 364, 1319, 2068, 2231, 2237, 2243
Hpy166II GTNNAC 9 cut(s) 372, 517, 669, 814, 1330, 1388, 1660, 1846, 2209
Hpy188I TCNGA 6 cut(s) 226, 410, 1437, 1606, 1720, 1912
Hpy188III TCNNGA 9 cut(s) 19, 89, 161, 503, 695, 832, 1748, 1979, 2156
Hpy8I GTNNAC 9 cut(s) 372, 517, 669, 814, 1330, 1388, 1660, 1846, 2209
Hpy99I CGWCG 1 cut(s) 410
HpyCH4III ACNGT 9 cut(s) 107, 121, 149, 158, 680, 1327, 1550, 2213, 2231
HpyCH4IV ACGT 6 cut(s) 615, 956, 1735, 1842, 2279, 2333
HpyF10VI GCNNNNNNNGC 6 cut(s) 10, 47, 540, 794, 870, 2036
HpyF3I CTNAG 5 cut(s) 1434, 1795, 1803, 1911, 2166
HpySE526I ACGT 6 cut(s) 615, 956, 1735, 1842, 2279, 2333
Hsp92I GRCGYC 1 cut(s) 1842
KpnI GGTACC 1 cut(s) 442
Ksp22I TGATCA 2 cut(s) 61, 1402
KspAI GTTAAC 1 cut(s) 517
Kzo9I GATC 6 cut(s) 61, 1402, 1437, 1565, 1693, 1750
LguI GCTCTTC 1 cut(s) 90
LmnI GCTCC 3 cut(s) 367, 533, 1727
Lsp1109I GCAGC 2 cut(s) 530, 1240
LweI GCATC 5 cut(s) 1610, 1972, 2129, 2137, 2274
MaeII ACGT 6 cut(s) 615, 956, 1735, 1842, 2279, 2333
MalI GATC 6 cut(s) 63, 1404, 1439, 1567, 1695, 1752
MboI GATC 6 cut(s) 61, 1402, 1437, 1565, 1693, 1750
MboII GAAGA 8 cut(s) 77, 473, 668, 1155, 1271, 1606, 1629, 1928
MhlI GDGCHC 1 cut(s) 1390
MlsI TGGCCA 1 cut(s) 2093
MluNI TGGCCA 1 cut(s) 2093
MlyI GAGTC 5 cut(s) 530, 561, 1308, 1866, 2158
MmeI TCCRAC 2 cut(s) 204, 388
Mox20I TGGCCA 1 cut(s) 2093
MroXI GAANNNNTTC 1 cut(s) 717
MscI TGGCCA 1 cut(s) 2093
MseI TTAA 6 cut(s) 516, 732, 1176, 1193, 1413, 2336
MslI CAYNNNNRTG 4 cut(s) 616, 1449, 1576, 1665
Msp20I TGGCCA 1 cut(s) 2093
MspI CCGG 4 cut(s) 477, 531, 779, 2304
MspR9I CCNGG 2 cut(s) 478, 926
MvaI CCWGG 1 cut(s) 926
MvnI CGCG 2 cut(s) 44, 1665
MwoI GCNNNNNNNGC 6 cut(s) 10, 47, 540, 794, 870, 2036
NciI CCSGG 1 cut(s) 478
NcoI CCATGG 3 cut(s) 1219, 1519, 2132
NdeII GATC 6 cut(s) 61, 1402, 1437, 1565, 1693, 1750
NlaIV GGNNCC 4 cut(s) 363, 385, 440, 884
NmeAIII GCCGAG 1 cut(s) 932
NmuCI GTSAC 5 cut(s) 188, 413, 494, 1838, 2225
NspI RCATGY 5 cut(s) 337, 487, 792, 1541, 2323
NspV TTCGAA 1 cut(s) 876
PaeI GCATGC 2 cut(s) 792, 2323
PagI TCATGA 1 cut(s) 18
PciSI GCTCTTC 1 cut(s) 90
PcsI WCGNNNNNNNCGW 1 cut(s) 1662
PdmI GAANNNNTTC 1 cut(s) 717
PfeI GAWTC 5 cut(s) 15, 727, 1123, 1969, 2032
PflMI CCANNNNNTGG 1 cut(s) 2294
PinAI ACCGGT 1 cut(s) 2303
PkrI GCNGC 4 cut(s) 43, 545, 1190, 1255
PleI GAGTC 5 cut(s) 529, 561, 1307, 1865, 2158
PpsI GAGTC 5 cut(s) 529, 561, 1307, 1865, 2158
Ppu21I YACGTR 1 cut(s) 616
Psp1406I AACGTT 2 cut(s) 2279, 2333
Psp6I CCWGG 1 cut(s) 924
PspFI CCCAGC 1 cut(s) 2176
PspGI CCWGG 1 cut(s) 924
PspN4I GGNNCC 4 cut(s) 363, 385, 440, 884
PspPI GGNCC 2 cut(s) 384, 752
PstI CTGCAG 2 cut(s) 1258, 1615
PstNI CAGNNNCTG 1 cut(s) 1610
RsaI GTAC 7 cut(s) 338, 440, 470, 1172, 1511, 1659, 2171
RsaNI GTAC 7 cut(s) 337, 439, 469, 1171, 1510, 1658, 2170
RseI CAYNNNNRTG 4 cut(s) 616, 1449, 1576, 1665
SapI GCTCTTC 1 cut(s) 90
SaqAI TTAA 6 cut(s) 516, 732, 1176, 1193, 1413, 2336
SatI GCNGC 4 cut(s) 42, 544, 1189, 1254
Sau3AI GATC 6 cut(s) 61, 1402, 1437, 1565, 1693, 1750
Sau96I GGNCC 2 cut(s) 384, 752
ScaI AGTACT 2 cut(s) 1172, 2171
SchI GAGTC 5 cut(s) 530, 561, 1308, 1866, 2158
ScrFI CCNGG 2 cut(s) 478, 926
SduI GDGCHC 1 cut(s) 1390
SfaNI GCATC 5 cut(s) 1610, 1972, 2129, 2137, 2274
SfcI CTRYAG 3 cut(s) 1254, 1611, 1846
SfuI TTCGAA 1 cut(s) 876
SinI GGWCC 1 cut(s) 384
SmiMI CAYNNNNRTG 4 cut(s) 616, 1449, 1576, 1665
SmlI CTYRAG 3 cut(s) 78, 1265, 2018
SmoI CTYRAG 3 cut(s) 78, 1265, 2018
SnaBI TACGTA 1 cut(s) 616
SpeI ACTAGT 1 cut(s) 1498
SphI GCATGC 2 cut(s) 792, 2323
SsiI CCGC 5 cut(s) 42, 198, 1017, 1188, 1663
SspI AATATT 2 cut(s) 1341, 2008
StyD4I CCNGG 2 cut(s) 476, 924
StyI CCWWGG 3 cut(s) 1219, 1519, 2132
TaaI ACNGT 9 cut(s) 107, 121, 149, 158, 680, 1327, 1550, 2213, 2231
TaiI ACGT 6 cut(s) 618, 959, 1738, 1845, 2282, 2336
TaqI TCGA 2 cut(s) 825, 876
TatI WGTACW 4 cut(s) 336, 1170, 1509, 2169
TauI GCSGC 2 cut(s) 44, 1191
TfiI GAWTC 5 cut(s) 15, 727, 1123, 1969, 2032
Tru1I TTAA 6 cut(s) 516, 732, 1176, 1193, 1413, 2336
Tru9I TTAA 6 cut(s) 516, 732, 1176, 1193, 1413, 2336
TscAI CASTG 2 cut(s) 110, 866
TseFI GTSAC 5 cut(s) 188, 413, 494, 1838, 2225
TseI GCWGC 2 cut(s) 543, 1253
Tsp45I GTSAC 5 cut(s) 188, 413, 494, 1838, 2225
TspGWI ACGGA 3 cut(s) 357, 579, 2111
TspRI CASTG 2 cut(s) 110, 866
Van91I CCANNNNNTGG 1 cut(s) 2294
VneI GTGCAC 1 cut(s) 1386
VpaK11BI GGWCC 1 cut(s) 384
XapI RAATTY 4 cut(s) 276, 395, 964, 1068
XbaI TCTAGA 1 cut(s) 1747
XceI RCATGY 5 cut(s) 337, 487, 792, 1541, 2323
XmiI GTMKAC 1 cut(s) 1845
XmnI GAANNNNTTC 1 cut(s) 717
ZraI GACGTC 1 cut(s) 1843
ZrmI AGTACT 2 cut(s) 1172, 2171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.