Rorug05G0111600

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
9953167 .. 9958259
5093 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0111600.1

Sequence Viewer

Length: 843 bp
ATGTTGAGGCCAAATGTTTCTCGTCAAGGTAAGAGAGGCGCCGGCGACGTTGATGAGTCCCTCCGTGACTCTAAACGGCCTCGTTCGGACCTCCCTGGGACAGATCAACGTGAAAAACTTGTACGAGTAGCCGACATGCCCAAGTGGAGTCGAAAATCCTTTGATGGAATCCATGAGCTGAACAGGGTGGATAGTCTTGTTTATGATACTGCTCTGTTTGAGACCAACAACATCCTCCTGAGTGCTCCAACTGGACCCGGGGAAGGTAATGTTGCCATCCTCGCCATTCTCCAGCAGTGCGATATGTTGGCTAGTTATAATGAAATTCGATATTGCAGCATGGAATATTACATGGAAAAAACATACTACAAGAATGCATCATCGATTTCAAATTCTTGCAAGGCAATTGCCATTCTTGCTGGGCATACAACACAAGTTGCCGAGATGGCTTTTGACTATGGAAAGAATCTGGGATTGGCGTTTCAATTGATAGACGATGTTCTTGATTTTTCGGGCACATCATCAACATCTCTTGGAAAGGGCTCATTATCTGACATCCGTCATGGCATTATCACTGCTCCAATATTGTTTGCCCCGGAAGAGTTCCCTCAGTTGGGTGCAGTTGTTGAAAAAGGATTTGACAATCCTTCAAATATTGAGATCGCTCTTGACTACCTTGGTAAGAGTAATGGTATACAGAGGACAAGGGATCTAGCAAGAAAGCATGCAAACCTTGCTGCAAAGGCAATCAAATTTCTGCCTGAGAGCGAGGACGAAAGCGTAAGAAGATCAAGGATGGCGCTCCTAGATCTCACCAACATAGTCCTCACAAGAACCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

280

Amino Acids

30.95

Weight (kDa)

6.46

Isoelectric Point (pI)

47.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
polyprenyl_synt PF00348 98 - 223 1.7e-24 Polyprenyl synthetase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 318
AccB1I GGYRCC 1 cut(s) 38
AccI GTMKAC 1 cut(s) 694
AclWI GGATC 1 cut(s) 717
AcsI RAATTY 3 cut(s) 324, 391, 752
AcyI GRCGYC 1 cut(s) 39
AfaI GTAC 1 cut(s) 123
AfiI CCNNNNNNNGG 3 cut(s) 263, 613, 614
AgsI TTSAA 4 cut(s) 390, 485, 629, 651
AjnI CCWGG 1 cut(s) 94
AjuI GAANNNNNNNTTGG 2 cut(s) 458, 490
AluBI AGCT 1 cut(s) 178
AluI AGCT 1 cut(s) 178
Alw21I GWGCWC 1 cut(s) 247
Alw26I GTCTC 1 cut(s) 215
AlwI GGATC 1 cut(s) 717
Ama87I CYCGRG 1 cut(s) 257
AoxI GGCC 2 cut(s) 8, 77
ApeKI GCWGC 2 cut(s) 336, 737
ApoI RAATTY 3 cut(s) 324, 391, 752
AspLEI GCGC 2 cut(s) 41, 802
AspS9I GGNCC 2 cut(s) 88, 254
AsuC2I CCSGG 3 cut(s) 258, 259, 596
AsuHPI GGTGA 1 cut(s) 805
AvaI CYCGRG 1 cut(s) 257
AvaII GGWCC 2 cut(s) 88, 254
BaeGI GKGCMC 1 cut(s) 518
BanI GGYRCC 1 cut(s) 38
BanII GRGCYC 1 cut(s) 545
Bbv12I GWGCWC 1 cut(s) 247
BbvI GCAGC 2 cut(s) 348, 724
BccI CCATC 4 cut(s) 158, 284, 439, 790
BceAI ACGGC 1 cut(s) 92
BciT130I CCWGG 1 cut(s) 96
BcnI CCSGG 3 cut(s) 258, 259, 596
BcoDI GTCTC 1 cut(s) 215
BfaI CTAG 3 cut(s) 312, 713, 806
BfoI RGCGCY 2 cut(s) 42, 803
BglI GCCNNNNNGGC 1 cut(s) 446
BglII AGATCT 1 cut(s) 808
BisI GCNGC 2 cut(s) 337, 738
BlsI GCNGC 2 cut(s) 338, 739
Bme1390I CCNGG 4 cut(s) 96, 258, 259, 596
Bme18I GGWCC 2 cut(s) 88, 254
BmeT110I CYCGRG 1 cut(s) 257
BmgT120I GGNCC 2 cut(s) 88, 254
BmiI GGNNCC 2 cut(s) 40, 256
BmrFI CCNGG 4 cut(s) 96, 258, 259, 596
BmsI GCATC 1 cut(s) 386
BoxI GACNNNNGTC 1 cut(s) 558
BpmI CTGGAG 1 cut(s) 275
BpuMI CCSGG 3 cut(s) 258, 259, 596
Bsa29I ATCGAT 1 cut(s) 383
BsaHI GRCGYC 1 cut(s) 39
BsaI GGTCTC 1 cut(s) 215
BsaJI CCNNGG 6 cut(s) 94, 95, 257, 258, 594, 676
Bsc4I CCNNNNNNNGG 3 cut(s) 263, 613, 614
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 1 cut(s) 256
BseBI CCWGG 1 cut(s) 96
BseCI ATCGAT 1 cut(s) 383
BseDI CCNNGG 6 cut(s) 94, 95, 257, 258, 594, 676
BseGI GGATG 4 cut(s) 231, 276, 555, 801
BseLI CCNNNNNNNGG 3 cut(s) 263, 613, 614
BseMII CTCAG 3 cut(s) 230, 623, 753
BseNI ACTGG 1 cut(s) 256
BseSI GKGCMC 1 cut(s) 518
BseXI GCAGC 2 cut(s) 348, 724
BseYI CCCAGC 1 cut(s) 419
BsgI GTGCAG 1 cut(s) 639
BshFI GGCC 2 cut(s) 10, 79
BshNI GGYRCC 1 cut(s) 38
BshVI ATCGAT 1 cut(s) 383
BsiHKAI GWGCWC 1 cut(s) 247
BsiHKCI CYCGRG 1 cut(s) 257
BsiSI CCGG 3 cut(s) 42, 258, 596
BslFI GGGAC 2 cut(s) 43, 112
BslI CCNNNNNNNGG 3 cut(s) 263, 613, 614
BsmAI GTCTC 1 cut(s) 215
BsmFI GGGAC 2 cut(s) 43, 112
BsmI GAATGC 1 cut(s) 379
BsnI GGCC 2 cut(s) 10, 79
Bso31I GGTCTC 1 cut(s) 215
BsoBI CYCGRG 1 cut(s) 257
Bsp1286I GDGCHC 3 cut(s) 247, 518, 545
Bsp143I GATC 5 cut(s) 103, 660, 709, 788, 808
BspANI GGCC 2 cut(s) 10, 79
BspCNI CTCAG 3 cut(s) 231, 622, 754
BspDI ATCGAT 1 cut(s) 383
BspLI GGNNCC 2 cut(s) 40, 256
BspPI GGATC 1 cut(s) 717
BspT107I GGYRCC 1 cut(s) 38
BspTNI GGTCTC 1 cut(s) 215
BsrFI RCCGGY 1 cut(s) 41
BsrI ACTGG 1 cut(s) 256
BssAI RCCGGY 1 cut(s) 41
BssECI CCNNGG 6 cut(s) 94, 95, 257, 258, 594, 676
BssMI GATC 5 cut(s) 103, 660, 709, 788, 808
BssNAI GTATAC 1 cut(s) 695
BssNI GRCGYC 1 cut(s) 39
BssT1I CCWWGG 1 cut(s) 676
Bst1107I GTATAC 1 cut(s) 695
Bst2UI CCWGG 1 cut(s) 96
Bst6I CTCTTC 1 cut(s) 594
BstACI GRCGYC 1 cut(s) 39
BstAPI GCANNNNNTGC 1 cut(s) 734
BstC8I GCNNGC 2 cut(s) 43, 726
BstDEI CTNAG 3 cut(s) 239, 609, 762
BstF5I GGATG 4 cut(s) 231, 276, 555, 801
BstH2I RGCGCY 2 cut(s) 42, 803
BstHHI GCGC 2 cut(s) 41, 802
BstKTI GATC 5 cut(s) 106, 663, 712, 791, 811
BstMAI GTCTC 1 cut(s) 215
BstMBI GATC 5 cut(s) 103, 660, 709, 788, 808
BstMWI GCNNNNNNNGC 5 cut(s) 281, 416, 446, 734, 743
BstNI CCWGG 1 cut(s) 96
BstNSI RCATGY 2 cut(s) 139, 728
BstPAI GACNNNNGTC 1 cut(s) 558
BstSCI CCNGG 4 cut(s) 94, 256, 257, 594
BstSLI GKGCMC 1 cut(s) 518
BstV1I GCAGC 2 cut(s) 348, 724
BstX2I RGATCY 2 cut(s) 709, 808
BstYI RGATCY 2 cut(s) 709, 808
BstZ17I GTATAC 1 cut(s) 695
Bsu15I ATCGAT 1 cut(s) 383
BsuRI GGCC 2 cut(s) 10, 79
BsuTUI ATCGAT 1 cut(s) 383
BtsCI GGATG 4 cut(s) 231, 276, 555, 801
BtsI GCAGTG 2 cut(s) 302, 573
BtsIMutI CAGTG 2 cut(s) 302, 573
Cac8I GCNNGC 2 cut(s) 43, 726
CfoI GCGC 2 cut(s) 41, 802
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 2 cut(s) 88, 254
Cfr9I CCCGGG 1 cut(s) 257
ClaI ATCGAT 1 cut(s) 383
Csp6I GTAC 1 cut(s) 122
CviAII CATG 6 cut(s) 136, 173, 340, 352, 563, 725
CviJI RGCY 7 cut(s) 10, 79, 131, 178, 311, 449, 543
CviKI_1 RGCY 7 cut(s) 10, 79, 131, 178, 311, 449, 543
CviQI GTAC 1 cut(s) 122
DdeI CTNAG 3 cut(s) 239, 609, 762
DinI GGCGCC 1 cut(s) 40
DpnI GATC 5 cut(s) 105, 662, 711, 790, 810
DpnII GATC 5 cut(s) 103, 660, 709, 788, 808
Eam1104I CTCTTC 1 cut(s) 594
EarI CTCTTC 1 cut(s) 594
Eco130I CCWWGG 1 cut(s) 676
Eco24I GRGCYC 1 cut(s) 545
Eco31I GGTCTC 1 cut(s) 215
Eco47I GGWCC 2 cut(s) 88, 254
Eco88I CYCGRG 1 cut(s) 257
EcoRII CCWGG 1 cut(s) 94
EcoT14I CCWWGG 1 cut(s) 676
EcoT22I ATGCAT 1 cut(s) 379
EcoT38I GRGCYC 1 cut(s) 545
EgeI GGCGCC 1 cut(s) 40
EheI GGCGCC 1 cut(s) 40
ErhI CCWWGG 1 cut(s) 676
FaeI CATG 6 cut(s) 139, 176, 343, 355, 566, 728
FaqI GGGAC 2 cut(s) 43, 112
FatI CATG 6 cut(s) 135, 172, 339, 351, 562, 724
FblI GTMKAC 1 cut(s) 694
Fnu4HI GCNGC 2 cut(s) 337, 738
FokI GGATG 4 cut(s) 218, 263, 542, 808
FriOI GRGCYC 1 cut(s) 545
Fsp4HI GCNGC 2 cut(s) 337, 738
FspBI CTAG 3 cut(s) 312, 713, 806
GlaI GCGC 2 cut(s) 40, 801
GluI GCNGC 2 cut(s) 337, 738
GsaI CCCAGC 1 cut(s) 423
GsuI CTGGAG 1 cut(s) 275
HaeII RGCGCY 2 cut(s) 42, 803
HaeIII GGCC 2 cut(s) 10, 79
HapII CCGG 3 cut(s) 42, 258, 596
HhaI GCGC 2 cut(s) 41, 802
Hin1I GRCGYC 1 cut(s) 39
Hin1II CATG 6 cut(s) 139, 176, 343, 355, 566, 728
Hin6I GCGC 2 cut(s) 39, 800
HinP1I GCGC 2 cut(s) 39, 800
HinfI GANTC 5 cut(s) 56, 68, 148, 168, 466
HpaII CCGG 3 cut(s) 42, 258, 596
HphI GGTGA 1 cut(s) 805
Hpy166II GTNNAC 1 cut(s) 695
Hpy188I TCNGA 2 cut(s) 88, 553
Hpy188III TCNNGA 3 cut(s) 238, 503, 668
Hpy8I GTNNAC 1 cut(s) 695
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 2 cut(s) 257, 657
HpyCH4IV ACGT 2 cut(s) 48, 109
HpyCH4V TGCA 6 cut(s) 336, 377, 399, 620, 728, 740
HpyF10VI GCNNNNNNNGC 5 cut(s) 281, 416, 446, 734, 743
HpyF3I CTNAG 3 cut(s) 239, 609, 762
HpySE526I ACGT 2 cut(s) 48, 109
Hsp92I GRCGYC 1 cut(s) 39
Hsp92II CATG 6 cut(s) 139, 176, 343, 355, 566, 728
HspAI GCGC 2 cut(s) 39, 800
KasI GGCGCC 1 cut(s) 38
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
Kzo9I GATC 5 cut(s) 103, 660, 709, 788, 808
LmnI GCTCC 3 cut(s) 250, 583, 807
Lsp1109I GCAGC 2 cut(s) 348, 724
LweI GCATC 1 cut(s) 386
MaeI CTAG 3 cut(s) 312, 713, 806
MaeII ACGT 2 cut(s) 48, 109
MaeIII GTNAC 1 cut(s) 65
MalI GATC 5 cut(s) 105, 662, 711, 790, 810
MboI GATC 5 cut(s) 103, 660, 709, 788, 808
MboII GAAGA 2 cut(s) 611, 798
MfeI CAATTG 2 cut(s) 405, 485
MflI RGATCY 2 cut(s) 709, 808
MhlI GDGCHC 3 cut(s) 247, 518, 545
MluCI AATT 5 cut(s) 324, 391, 405, 485, 752
Mly113I GGCGCC 1 cut(s) 39
MlyI GAGTC 3 cut(s) 62, 65, 157
MmeI TCCRAC 1 cut(s) 272
Mph1103I ATGCAT 1 cut(s) 379
MreI CGCCGGCG 1 cut(s) 41
MroNI GCCGGC 1 cut(s) 41
MspI CCGG 3 cut(s) 42, 258, 596
MspR9I CCNGG 4 cut(s) 96, 258, 259, 596
MunI CAATTG 2 cut(s) 405, 485
Mva1269I GAATGC 1 cut(s) 379
MvaI CCWGG 1 cut(s) 96
MwoI GCNNNNNNNGC 5 cut(s) 281, 416, 446, 734, 743
NaeI GCCGGC 1 cut(s) 43
NarI GGCGCC 1 cut(s) 39
NciI CCSGG 3 cut(s) 258, 259, 596
NdeII GATC 5 cut(s) 103, 660, 709, 788, 808
NgoMIV GCCGGC 1 cut(s) 41
NlaIII CATG 6 cut(s) 139, 176, 343, 355, 566, 728
NlaIV GGNNCC 2 cut(s) 40, 256
NmeAIII GCCGAG 1 cut(s) 466
NmuCI GTSAC 1 cut(s) 65
NsiI ATGCAT 1 cut(s) 379
NspI RCATGY 2 cut(s) 139, 728
PaeI GCATGC 1 cut(s) 728
PasI CCCWGGG 1 cut(s) 95
PctI GAATGC 1 cut(s) 379
PdiI GCCGGC 1 cut(s) 43
PfeI GAWTC 2 cut(s) 168, 466
PkrI GCNGC 2 cut(s) 338, 739
PleI GAGTC 3 cut(s) 62, 64, 156
PluTI GGCGCC 1 cut(s) 42
PpsI GAGTC 3 cut(s) 62, 64, 156
PshAI GACNNNNGTC 1 cut(s) 558
PsiI TTATAA 1 cut(s) 318
Psp6I CCWGG 1 cut(s) 94
PspFI CCCAGC 1 cut(s) 419
PspGI CCWGG 1 cut(s) 94
PspN4I GGNNCC 2 cut(s) 40, 256
PspPI GGNCC 2 cut(s) 88, 254
PsuI RGATCY 2 cut(s) 709, 808
RsaI GTAC 1 cut(s) 123
RsaNI GTAC 1 cut(s) 122
SatI GCNGC 2 cut(s) 337, 738
Sau3AI GATC 5 cut(s) 103, 660, 709, 788, 808
Sau96I GGNCC 2 cut(s) 88, 254
SchI GAGTC 3 cut(s) 62, 65, 157
ScrFI CCNGG 4 cut(s) 96, 258, 259, 596
SduI GDGCHC 3 cut(s) 247, 518, 545
SetI ASST 8 cut(s) 31, 51, 93, 112, 180, 268, 678, 735
SfaNI GCATC 1 cut(s) 386
SfoI GGCGCC 1 cut(s) 40
SgrAI CRCCGGYG 1 cut(s) 41
SinI GGWCC 2 cut(s) 88, 254
SmaI CCCGGG 1 cut(s) 259
SphI GCATGC 1 cut(s) 728
Sse9I AATT 5 cut(s) 324, 391, 405, 485, 752
SspDI GGCGCC 1 cut(s) 38
SspI AATATT 3 cut(s) 347, 585, 655
SspMI CTAG 3 cut(s) 312, 713, 806
StyD4I CCNGG 4 cut(s) 94, 256, 257, 594
StyI CCWWGG 1 cut(s) 676
TaiI ACGT 2 cut(s) 51, 112
TaqI TCGA 3 cut(s) 151, 328, 383
TasI AATT 5 cut(s) 324, 391, 405, 485, 752
TfiI GAWTC 2 cut(s) 168, 466
TscAI CASTG 2 cut(s) 302, 580
TseFI GTSAC 1 cut(s) 65
TseI GCWGC 2 cut(s) 336, 737
Tsp45I GTSAC 1 cut(s) 65
TspDTI ATGAA 1 cut(s) 336
TspGWI ACGGA 2 cut(s) 53, 548
TspMI CCCGGG 1 cut(s) 257
TspRI CASTG 2 cut(s) 302, 580
VpaK11BI GGWCC 2 cut(s) 88, 254
XapI RAATTY 3 cut(s) 324, 391, 752
XceI RCATGY 2 cut(s) 139, 728
XmaI CCCGGG 1 cut(s) 257
XmiI GTMKAC 1 cut(s) 694
XspI CTAG 3 cut(s) 312, 713, 806
Zsp2I ATGCAT 1 cut(s) 379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.