Rmu_sc0011109.1_g000002

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0011109.1
OG0000066
Physical Location & Seq
Reverse (-)
2483 .. 5257
2775 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0011109.1_g000002.1.cds

Sequence Viewer

Length: 1911 bp
atgcaattcatactggtagcggtactggttctcttcacatttgcggccgcggccgaagaaacagtagcagctgaagccgtcctgcctcaagccaagcctggctgcattgaccgctgtggcaacctcaccattccatatccatttggcatagggcctgattgttacatgaccaaagacttttctgttcgttgtaacacatccactaaacccccaatagcaatgtgggatgatagtcccatcgctattaacaacatatacctggctgaaggtgagatgcaaatagcgcagtacgtagcctacgattgctatgacagccagggctcgacttattccatcgaagcattgctctccgtgcctcctcctttcaccgtctctcatactagaaacaagttcattgccattggttgcgatgcttatgcacttttcagaggttaccgtgcagacgaagagagctacgtgaccggatgcatgtccatatgtgacaaccttgacagcgttgaacagtcttgctccggggttgggtgttgccaaactgacatccctagaggacttaagaactacactctcagactcgatagctactataatcatacatacatactggacttcaatccatgcagctatgccttcattgtggaagaaggccagtttaccttttccccgaatacaagttttggagaactcgccaacactgaaaagcttcccacgattcttaattgggaaattggggaagggccatgtgatgaagctcaaaagaaagatgattatgcatgcaagggaattaatagtaagtgtgtcaatcggaacatcagcgatgagcgatctggttatatttgtcactgccagccgggttatcaagggaacccctacctccctgatggttgccaaggtgtaactggcggcttcttagttctatttgttggaatttcatggatatgttgcggaataaagaaaagaaaattcatgaaactcaaagaaaagtactttaaagagaatggtggcttattgttactacagaaactcgctaataatggaggctcagtggagacaacaaaaatattcaccacagaagaactagagaaggcaacaaacaattaccatgagagtagagtccttggagaaggaggctacggaacagtttataaaggggtactacttgacaacaaagtggttgccataaagaagtccaaaggtggtacctcgatccagagtgaacagtttgttaatgaggtcgttgttctttcccaaatcaaccacagaaatgtggtgaagctactaggttgttgtttagagacagcagtacctttactagtatatgagtttgtcacccatggcactttatatgagcacattcatagaaaaagatcactactgtcattcgaactacgaatgaagatagctgttgaaacagcaggagcactagcatacttacactcctctatatccacgccaatcatacatcgagatgtgaaagcagcaaatatactcctagatgataattatacagctaaagtgtcggactttggagcttcacggttggttccttcaggtcaaaatgaaatacaaactttagtgcgcgggacatttggctacctagacccagaatatttgcagtcaaaccaactaacagaaaaaagtgatgtctacagctttggagttgtcctagtggagctactaacaagcaaagtggcattttctaatgatagatgcttagcaagcatctttgtttcttccatggatgaagattgcttaaaacaaattcttgatgatgccatagtgaatgagggaaacattgagacagtagaaaacgtggcgagtctcgcaaaaagatgtttgagggtaaaaggggaggaaaggcctaccatgaaagaagttgccatggagttagagggaatgacaattacggcatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

636

Amino Acids

70.25

Weight (kDa)

5.17

Isoelectric Point (pI)

36.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1143
Acc65I GGTACC 1 cut(s) 1196
AccB1I GGYRCC 1 cut(s) 1196
AccI GTMKAC 1 cut(s) 1644
AccII CGCG 2 cut(s) 50, 1578
AciI CCGC 8 cut(s) 20, 44, 48, 50, 112, 900, 942, 1578
AclWI GGATC 1 cut(s) 1198
AcoI YGGCCR 2 cut(s) 45, 51
AcsI RAATTY 3 cut(s) 924, 959, 1758
AcuI CTGAAG 3 cut(s) 93, 285, 1530
AfaI GTAC 6 cut(s) 24, 290, 983, 1152, 1198, 1302
AfiI CCNNNNNNNGG 1 cut(s) 519
AflII CTTAAG 1 cut(s) 551
AgsI TTSAA 3 cut(s) 500, 610, 1406
AhlI ACTAGT 1 cut(s) 1309
AjnI CCWGG 3 cut(s) 97, 258, 315
Alw21I GWGCWC 2 cut(s) 1350, 1420
Alw26I GTCTC 5 cut(s) 376, 1040, 1286, 1790, 1823
AlwI GGATC 1 cut(s) 1198
AoxI GGCC 6 cut(s) 45, 51, 152, 643, 734, 1856
ApeKI GCWGC 4 cut(s) 68, 102, 618, 1475
ApoI RAATTY 3 cut(s) 924, 959, 1758
AseI ATTAAT 1 cut(s) 783
Asp700I GAANNNNTTC 1 cut(s) 699
Asp718I GGTACC 1 cut(s) 1196
AspLEI GCGC 2 cut(s) 286, 1578
AspS9I GGNCC 2 cut(s) 152, 734
AsuC2I CCSGG 2 cut(s) 514, 849
AsuHPI GGTGA 6 cut(s) 118, 281, 358, 1054, 1279, 1318
AsuII TTCGAA 1 cut(s) 1380
BaeI ACNNNNGTAYC 2 cut(s) 1284, 1317
BanI GGYRCC 1 cut(s) 1196
BanII GRGCYC 1 cut(s) 323
Bbv12I GWGCWC 2 cut(s) 1350, 1420
BbvI GCAGC 4 cut(s) 80, 89, 630, 1487
BccI CCATC 3 cut(s) 245, 341, 872
BceAI ACGGC 1 cut(s) 62
BcgI CGANNNNNNTGC 2 cut(s) 398, 432
BciT130I CCWGG 3 cut(s) 99, 260, 317
BcnI CCSGG 2 cut(s) 514, 849
BcoDI GTCTC 5 cut(s) 376, 1040, 1286, 1790, 1823
BcuI ACTAGT 1 cut(s) 1309
BfaI CTAG 9 cut(s) 381, 543, 1076, 1277, 1310, 1421, 1490, 1595, 1664
BfmI CTRYAG 2 cut(s) 1013, 1645
BfrI CTTAAG 1 cut(s) 551
BisI GCNGC 8 cut(s) 45, 48, 51, 69, 103, 619, 901, 1476
BlpI GCTNAGC 1 cut(s) 1711
BlsI GCNGC 8 cut(s) 46, 49, 52, 70, 104, 620, 902, 1477
BmcAI AGTACT 1 cut(s) 983
Bme1390I CCNGG 5 cut(s) 99, 260, 317, 514, 849
BmgT120I GGNCC 2 cut(s) 152, 734
BmiI GGNNCC 3 cut(s) 863, 1198, 1542
BmrFI CCNGG 5 cut(s) 99, 260, 317, 514, 849
BmsI GCATC 6 cut(s) 264, 400, 455, 1697, 1728, 1759
Bpu1102I GCTNAGC 1 cut(s) 1711
Bpu14I TTCGAA 1 cut(s) 1380
BpuEI CTTGAG 1 cut(s) 72
BpuMI CCSGG 2 cut(s) 514, 849
BsaAI YACGTR 2 cut(s) 292, 457
BsaJI CCNNGG 8 cut(s) 48, 316, 513, 886, 1114, 1330, 1734, 1878
BsaWI WCCGGW 1 cut(s) 461
BsaXI ACNNNNNCTCC 4 cut(s) 1026, 1056, 1418, 1448
Bsc4I CCNNNNNNNGG 1 cut(s) 519
Bse1I ACTGG 5 cut(s) 18, 30, 606, 646, 901
Bse3DI GCAATG 3 cut(s) 225, 341, 393
BseBI CCWGG 3 cut(s) 99, 260, 317
BseDI CCNNGG 8 cut(s) 48, 316, 513, 886, 1114, 1330, 1734, 1878
BseGI GGATG 5 cut(s) 197, 232, 470, 537, 1744
BseLI CCNNNNNNNGG 1 cut(s) 519
BseMI GCAATG 3 cut(s) 225, 341, 393
BseMII CTCAG 2 cut(s) 580, 1053
BseNI ACTGG 5 cut(s) 18, 30, 606, 646, 901
BseRI GAGGAG 2 cut(s) 348, 1426
BseX3I CGGCCG 2 cut(s) 45, 51
BseXI GCAGC 4 cut(s) 80, 89, 630, 1487
BsgI GTGCAG 1 cut(s) 459
Bsh1236I CGCG 2 cut(s) 50, 1578
Bsh1285I CGRYCG 2 cut(s) 48, 54
BshFI GGCC 6 cut(s) 47, 53, 154, 645, 736, 1858
BshNI GGYRCC 1 cut(s) 1196
BsiEI CGRYCG 2 cut(s) 48, 54
BsiHKAI GWGCWC 2 cut(s) 1350, 1420
BsiSI CCGG 3 cut(s) 462, 513, 848
BslFI GGGAC 2 cut(s) 219, 1594
BslI CCNNNNNNNGG 1 cut(s) 519
BsmAI GTCTC 5 cut(s) 376, 1040, 1286, 1790, 1823
BsmBI CGTCTC 1 cut(s) 376
BsmFI GGGAC 2 cut(s) 219, 1594
BsnI GGCC 6 cut(s) 47, 53, 154, 645, 736, 1858
Bsp119I TTCGAA 1 cut(s) 1380
Bsp1286I GDGCHC 3 cut(s) 323, 1350, 1420
Bsp143I GATC 3 cut(s) 821, 1203, 1364
Bsp1720I GCTNAGC 1 cut(s) 1711
Bsp19I CCATGG 3 cut(s) 1330, 1734, 1878
BspACI CCGC 8 cut(s) 20, 44, 48, 50, 112, 900, 942, 1578
BspANI GGCC 6 cut(s) 47, 53, 154, 645, 736, 1858
BspCNI CTCAG 2 cut(s) 579, 1052
BspFNI CGCG 2 cut(s) 50, 1578
BspHI TCATGA 1 cut(s) 963
BspLI GGNNCC 3 cut(s) 863, 1198, 1542
BspPI GGATC 1 cut(s) 1198
BspT104I TTCGAA 1 cut(s) 1380
BspT107I GGYRCC 1 cut(s) 1196
BspTI CTTAAG 1 cut(s) 551
BsrDI GCAATG 3 cut(s) 225, 341, 393
BsrI ACTGG 5 cut(s) 18, 30, 606, 646, 901
BssECI CCNNGG 8 cut(s) 48, 316, 513, 886, 1114, 1330, 1734, 1878
BssMI GATC 3 cut(s) 821, 1203, 1364
BssT1I CCWWGG 5 cut(s) 886, 1114, 1330, 1734, 1878
Bst2UI CCWGG 3 cut(s) 99, 260, 317
Bst4CI ACNGT 9 cut(s) 64, 370, 437, 504, 1138, 1218, 1374, 1536, 1801
Bst6I CTCTTC 2 cut(s) 38, 441
BstAFI CTTAAG 1 cut(s) 551
BstBAI YACGTR 2 cut(s) 292, 457
BstBI TTCGAA 1 cut(s) 1380
BstC8I GCNNGC 3 cut(s) 772, 845, 1717
BstDEI CTNAG 4 cut(s) 566, 907, 1039, 1711
BstDSI CCRYGG 4 cut(s) 48, 1330, 1734, 1878
BstEII GGTNACC 1 cut(s) 431
BstF5I GGATG 5 cut(s) 197, 232, 470, 537, 1744
BstFNI CGCG 2 cut(s) 50, 1578
BstHHI GCGC 2 cut(s) 286, 1578
BstKTI GATC 3 cut(s) 824, 1206, 1367
BstMAI GTCTC 5 cut(s) 376, 1040, 1286, 1790, 1823
BstMBI GATC 3 cut(s) 821, 1203, 1364
BstMCI CGRYCG 2 cut(s) 48, 54
BstMWI GCNNNNNNNGC 8 cut(s) 50, 74, 111, 283, 312, 352, 1716, 1820
BstNI CCWGG 3 cut(s) 99, 260, 317
BstNSI RCATGY 2 cut(s) 472, 774
BstPI GGTNACC 1 cut(s) 431
BstSCI CCNGG 5 cut(s) 97, 258, 315, 512, 847
BstSFI CTRYAG 2 cut(s) 1013, 1645
BstSNI TACGTA 1 cut(s) 292
BstUI CGCG 2 cut(s) 50, 1578
BstV1I GCAGC 4 cut(s) 80, 89, 630, 1487
BstZI CGGCCG 2 cut(s) 45, 51
BsuRI GGCC 6 cut(s) 47, 53, 154, 645, 736, 1858
BtgI CCRYGG 4 cut(s) 48, 1330, 1734, 1878
BtgZI GCGATG 3 cut(s) 223, 423, 828
BtsCI GGATG 5 cut(s) 197, 232, 470, 537, 1744
BtsI GCAGTG 1 cut(s) 838
BtsIMutI CAGTG 3 cut(s) 690, 838, 1047
Cac8I GCNNGC 3 cut(s) 772, 845, 1717
CciI TCATGA 1 cut(s) 963
CciNI GCGGCCGC 1 cut(s) 45
CfoI GCGC 2 cut(s) 286, 1578
Cfr13I GGNCC 2 cut(s) 152, 734
Cfr42I CCGCGG 1 cut(s) 51
Csp6I GTAC 6 cut(s) 23, 289, 982, 1151, 1197, 1301
CspCI CAANNNNNGTGG 2 cut(s) 1668, 1703
CviQI GTAC 6 cut(s) 23, 289, 982, 1151, 1197, 1301
DdeI CTNAG 4 cut(s) 566, 907, 1039, 1711
DpnI GATC 3 cut(s) 823, 1205, 1366
DpnII GATC 3 cut(s) 821, 1203, 1364
DraI TTTAAA 1 cut(s) 988
EaeI YGGCCR 2 cut(s) 45, 51
EagI CGGCCG 2 cut(s) 45, 51
Eam1104I CTCTTC 2 cut(s) 38, 441
EarI CTCTTC 2 cut(s) 38, 441
EclXI CGGCCG 2 cut(s) 45, 51
Eco105I TACGTA 1 cut(s) 292
Eco130I CCWWGG 5 cut(s) 886, 1114, 1330, 1734, 1878
Eco147I AGGCCT 1 cut(s) 1858
Eco24I GRGCYC 1 cut(s) 323
Eco52I CGGCCG 2 cut(s) 45, 51
Eco57I CTGAAG 3 cut(s) 93, 285, 1530
Eco91I GGTNACC 1 cut(s) 431
EcoO109I RGGNCCY 1 cut(s) 152
EcoO65I GGTNACC 1 cut(s) 431
EcoRII CCWGG 3 cut(s) 97, 258, 315
EcoT14I CCWWGG 5 cut(s) 886, 1114, 1330, 1734, 1878
EcoT22I ATGCAT 2 cut(s) 470, 772
EcoT38I GRGCYC 1 cut(s) 323
ErhI CCWWGG 5 cut(s) 886, 1114, 1330, 1734, 1878
Esp3I CGTCTC 1 cut(s) 376
FaqI GGGAC 2 cut(s) 219, 1594
FauI CCCGC 1 cut(s) 1571
FauNDI CATATG 1 cut(s) 476
FblI GTMKAC 1 cut(s) 1644
Fnu4HI GCNGC 8 cut(s) 45, 48, 51, 69, 103, 619, 901, 1476
FokI GGATG 5 cut(s) 184, 239, 477, 524, 1751
FriOI GRGCYC 1 cut(s) 323
Fsp4HI GCNGC 8 cut(s) 45, 48, 51, 69, 103, 619, 901, 1476
FspBI CTAG 9 cut(s) 381, 543, 1076, 1277, 1310, 1421, 1490, 1595, 1664
GlaI GCGC 2 cut(s) 285, 1577
GluI GCNGC 8 cut(s) 45, 48, 51, 69, 103, 619, 901, 1476
HaeIII GGCC 6 cut(s) 47, 53, 154, 645, 736, 1858
HapII CCGG 3 cut(s) 462, 513, 848
HhaI GCGC 2 cut(s) 286, 1578
Hin6I GCGC 2 cut(s) 284, 1576
HinP1I GCGC 2 cut(s) 284, 1576
HindIII AAGCTT 1 cut(s) 698
HinfI GANTC 4 cut(s) 570, 709, 1110, 1816
HpaII CCGG 3 cut(s) 462, 513, 848
HphI GGTGA 6 cut(s) 118, 281, 358, 1054, 1279, 1318
Hpy166II GTNNAC 3 cut(s) 651, 1214, 1645
Hpy188I TCNGA 4 cut(s) 428, 569, 804, 1519
Hpy188III TCNNGA 4 cut(s) 964, 1207, 1463, 1763
Hpy8I GTNNAC 3 cut(s) 651, 1214, 1645
HpyAV CCTTC 7 cut(s) 260, 635, 637, 725, 1075, 1115, 1554
HpyCH4III ACNGT 9 cut(s) 64, 370, 437, 504, 1138, 1218, 1374, 1536, 1801
HpyCH4IV ACGT 3 cut(s) 291, 456, 1809
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 74, 111, 283, 312, 352, 1716, 1820
HpyF3I CTNAG 4 cut(s) 566, 907, 1039, 1711
HpySE526I ACGT 3 cut(s) 291, 456, 1809
HspAI GCGC 2 cut(s) 284, 1576
KpnI GGTACC 1 cut(s) 1200
KspI CCGCGG 1 cut(s) 51
Kzo9I GATC 3 cut(s) 821, 1203, 1364
LmnI GCTCC 4 cut(s) 515, 1415, 1526, 1669
Lsp1109I GCAGC 4 cut(s) 80, 89, 630, 1487
LweI GCATC 6 cut(s) 264, 400, 455, 1697, 1728, 1759
MaeI CTAG 9 cut(s) 381, 543, 1076, 1277, 1310, 1421, 1490, 1595, 1664
MaeII ACGT 3 cut(s) 291, 456, 1809
MaeIII GTNAC 9 cut(s) 161, 191, 431, 457, 479, 836, 892, 1008, 1324
MalI GATC 3 cut(s) 823, 1205, 1366
MboI GATC 3 cut(s) 821, 1203, 1364
MboII GAAGA 8 cut(s) 25, 68, 458, 650, 1082, 1405, 1722, 1754
MhlI GDGCHC 3 cut(s) 323, 1350, 1420
MlyI GAGTC 3 cut(s) 564, 1119, 1825
MmeI TCCRAC 2 cut(s) 901, 1497
Mph1103I ATGCAT 2 cut(s) 470, 772
MroXI GAANNNNTTC 1 cut(s) 699
MseI TTAA 7 cut(s) 246, 552, 714, 783, 987, 1224, 1751
MslI CAYNNNNRTG 3 cut(s) 934, 1260, 1464
MspA1I CMGCKG 3 cut(s) 50, 71, 114
MspCI CTTAAG 1 cut(s) 551
MspI CCGG 3 cut(s) 462, 513, 848
MspR9I CCNGG 5 cut(s) 99, 260, 317, 514, 849
MvaI CCWGG 3 cut(s) 99, 260, 317
MvnI CGCG 2 cut(s) 50, 1578
MwoI GCNNNNNNNGC 8 cut(s) 50, 74, 111, 283, 312, 352, 1716, 1820
NciI CCSGG 2 cut(s) 514, 849
NcoI CCATGG 3 cut(s) 1330, 1734, 1878
NdeI CATATG 1 cut(s) 476
NdeII GATC 3 cut(s) 821, 1203, 1364
NlaIV GGNNCC 3 cut(s) 863, 1198, 1542
NmuCI GTSAC 4 cut(s) 457, 479, 836, 1324
NotI GCGGCCGC 1 cut(s) 45
NsiI ATGCAT 2 cut(s) 470, 772
NspI RCATGY 2 cut(s) 472, 774
NspV TTCGAA 1 cut(s) 1380
PaeI GCATGC 1 cut(s) 774
PagI TCATGA 1 cut(s) 963
PceI AGGCCT 1 cut(s) 1858
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 699
PfeI GAWTC 1 cut(s) 709
PkrI GCNGC 8 cut(s) 46, 49, 52, 70, 104, 620, 902, 1477
PleI GAGTC 3 cut(s) 564, 1118, 1824
PpsI GAGTC 3 cut(s) 564, 1118, 1824
Ppu21I YACGTR 2 cut(s) 292, 457
PshBI ATTAAT 1 cut(s) 783
PsiI TTATAA 1 cut(s) 1143
Psp6I CCWGG 3 cut(s) 97, 258, 315
PspEI GGTNACC 1 cut(s) 431
PspGI CCWGG 3 cut(s) 97, 258, 315
PspN4I GGNNCC 3 cut(s) 863, 1198, 1542
PspPI GGNCC 2 cut(s) 152, 734
PvuII CAGCTG 1 cut(s) 71
RsaI GTAC 6 cut(s) 24, 290, 983, 1152, 1198, 1302
RsaNI GTAC 6 cut(s) 23, 289, 982, 1151, 1197, 1301
RseI CAYNNNNRTG 3 cut(s) 934, 1260, 1464
SacII CCGCGG 1 cut(s) 51
SaqAI TTAA 7 cut(s) 246, 552, 714, 783, 987, 1224, 1751
SatI GCNGC 8 cut(s) 45, 48, 51, 69, 103, 619, 901, 1476
Sau3AI GATC 3 cut(s) 821, 1203, 1364
Sau96I GGNCC 2 cut(s) 152, 734
ScaI AGTACT 1 cut(s) 983
SchI GAGTC 3 cut(s) 564, 1119, 1825
ScrFI CCNGG 5 cut(s) 99, 260, 317, 514, 849
SduI GDGCHC 3 cut(s) 323, 1350, 1420
SfaNI GCATC 6 cut(s) 264, 400, 455, 1697, 1728, 1759
SfcI CTRYAG 2 cut(s) 1013, 1645
Sfr303I CCGCGG 1 cut(s) 51
SfuI TTCGAA 1 cut(s) 1380
SgrBI CCGCGG 1 cut(s) 51
SmiMI CAYNNNNRTG 3 cut(s) 934, 1260, 1464
SmlI CTYRAG 2 cut(s) 87, 551
SmoI CTYRAG 2 cut(s) 87, 551
SnaBI TACGTA 1 cut(s) 292
SpeI ACTAGT 1 cut(s) 1309
SphI GCATGC 1 cut(s) 774
SseBI AGGCCT 1 cut(s) 1858
SsiI CCGC 8 cut(s) 20, 44, 48, 50, 112, 900, 942, 1578
SspI AATATT 2 cut(s) 1059, 1607
SspMI CTAG 9 cut(s) 381, 543, 1076, 1277, 1310, 1421, 1490, 1595, 1664
StuI AGGCCT 1 cut(s) 1858
StyD4I CCNGG 5 cut(s) 97, 258, 315, 512, 847
StyI CCWWGG 5 cut(s) 886, 1114, 1330, 1734, 1878
TaaI ACNGT 9 cut(s) 64, 370, 437, 504, 1138, 1218, 1374, 1536, 1801
TaiI ACGT 3 cut(s) 294, 459, 1812
TaqI TCGA 6 cut(s) 323, 336, 573, 1202, 1380, 1462
TatI WGTACW 1 cut(s) 981
TauI GCSGC 4 cut(s) 47, 50, 53, 903
TfiI GAWTC 1 cut(s) 709
Tru1I TTAA 7 cut(s) 246, 552, 714, 783, 987, 1224, 1751
Tru9I TTAA 7 cut(s) 246, 552, 714, 783, 987, 1224, 1751
TscAI CASTG 3 cut(s) 697, 845, 1047
TseFI GTSAC 4 cut(s) 457, 479, 836, 1324
TseI GCWGC 4 cut(s) 68, 102, 618, 1475
Tsp45I GTSAC 4 cut(s) 457, 479, 836, 1324
TspGWI ACGGA 2 cut(s) 340, 1146
TspRI CASTG 3 cut(s) 697, 845, 1047
Vha464I CTTAAG 1 cut(s) 551
VspI ATTAAT 1 cut(s) 783
XapI RAATTY 3 cut(s) 924, 959, 1758
XceI RCATGY 2 cut(s) 472, 774
XcmI CCANNNNNNNNNTGG 2 cut(s) 219, 893
XmiI GTMKAC 1 cut(s) 1644
XmnI GAANNNNTTC 1 cut(s) 699
XspI CTAG 9 cut(s) 381, 543, 1076, 1277, 1310, 1421, 1490, 1595, 1664
ZrmI AGTACT 1 cut(s) 983
Zsp2I ATGCAT 2 cut(s) 470, 772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.