Rw5G011120

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000066
Physical Location & Seq
Reverse (-)
12503885 .. 12505194
1310 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G011120.1

Sequence Viewer

Length: 1134 bp
ATGAATTTTTCTGCTCACACGTGGCAAGTTAAGAGTGAGTACACTGAGTGTGAGCCTAGCACTCTCCACCTCAGATATTTCATTTTTCAATTATGTGCAGGTGTCAGTATAAGCTTCTTGGTTTTAGTGTTCTTGATTTCGTGGATATATTGGGAAATGAACAAAAGAAGGCTCATCAAACTCAAAAAGAAGTACTTCAAAGAAAACGGTGGCTTAACATTACAACAACAACTCGCTAGCCATGGAGGAGCCGTGGAAACAGCAAAAATCTTTACAGCGGAAGAACTTGAGAAGGCGACAAACAATTACCATGCAAATGAGATTCTTGGTGAAGGAGCCTATGGAACAGTTTACAAAGGAATTCTACCTGATAAGAAAGTTGTTGCCATAAAAAAATCAAAAATTGGCGCCCCAACTCAAAGTGAGCAGTTCGTTAATGAGGTTATCATTCTCTCTCAAATCAACCACAGAAATGTAGTAAAACTGTTGGGTTGTTGTTTCGAGACTGAAGTGCCTTTACTAGTTTATGAGTACATTACCCATGGCACTCTTTTTGAGCATATATTCAATAAGGGAAAAGGATCACCGCTTTCATGGGAATTACGATTGAAGATAGCATCAGAAACGGCAGGGGCACTAGCTTACTTACACTCCTCTACTTCCACACCAAGCATACATCGAGACGTGAAAGCAACAAATATACTATTAGATGACAATTACACTGCCAAAGTACCTGACGCAGAGAGATGCCTAGCAAGTTTCTTTGTTTCTTCAGTAGAGAACGATTGCTTGATTGAAATTCTTGACGCTGACATAGTGATTGAGGGGAACATAGACACAGCAGAGCAAGTTGCTTATCTCGCAAAAAGATGTCTAGGGATAAGAGGGGAGGAAAGGCCTTCCATGAAAGAAGTGGCCATGGAGTTGGAAGGAATGCAAAATACAGCGAAGCATCCATGGCGAAATAATGCAAATTTATGCCCCGAGGAGACTGAGTACTTGTTGGGGTCACCTATCAATTCAGAAGCTTACATTGTGAATGTTAAAGGTGATGTTGATGAAGGTTCTAGTGGTACAACAAGTGGGTATGACAGCATGCAAATTCAAATGTTAATGCCATATGATGATGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK hEGF

Protein Analysis

377

Amino Acids

42.18

Weight (kDa)

5.39

Isoelectric Point (pI)

36.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 103 - 246 1.3e-25 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 105 - 246 7.2e-29 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 89
Acc36I ACCTGC 1 cut(s) 89
AccB1I GGYRCC 1 cut(s) 407
AciI CCGC 2 cut(s) 278, 587
AclWI GGATC 1 cut(s) 589
AcoI YGGCCR 1 cut(s) 915
AcsI RAATTY 5 cut(s) 4, 360, 798, 973, 1101
AcuI CTGAAG 2 cut(s) 528, 756
AcvI CACGTG 1 cut(s) 21
AcyI GRCGYC 1 cut(s) 408
AdeI CACNNNGTG 1 cut(s) 48
AfaI GTAC 6 cut(s) 41, 194, 533, 732, 998, 1075
AflIII ACRYGT 1 cut(s) 18
AgsI TTSAA 6 cut(s) 89, 199, 568, 610, 797, 1106
AhlI ACTAGT 1 cut(s) 520
AjiI CACGTC 1 cut(s) 685
AluBI AGCT 3 cut(s) 114, 641, 1028
AluI AGCT 3 cut(s) 114, 641, 1028
Alw26I GTCTC 3 cut(s) 497, 675, 983
AlwI GGATC 1 cut(s) 589
Ama87I CYCGRG 1 cut(s) 983
AoxI GGCC 2 cut(s) 896, 915
ApoI RAATTY 5 cut(s) 4, 360, 798, 973, 1101
Asp700I GAANNNNTTC 1 cut(s) 194
AspLEI GCGC 1 cut(s) 410
AsuHPI GGTGA 4 cut(s) 341, 576, 1002, 1061
AsuNHI GCTAGC 1 cut(s) 236
AvaI CYCGRG 1 cut(s) 983
BaeGI GKGCMC 1 cut(s) 637
BalI TGGCCA 1 cut(s) 917
BanI GGYRCC 1 cut(s) 407
BarI GAAGNNNNNNTAC 2 cut(s) 501, 533
BbrPI CACGTG 1 cut(s) 21
BceAI ACGGC 2 cut(s) 236, 642
BcoDI GTCTC 3 cut(s) 497, 675, 983
BcuI ACTAGT 1 cut(s) 520
BfaI CTAG 7 cut(s) 57, 237, 521, 638, 752, 875, 1068
BfoI RGCGCY 1 cut(s) 411
BfuAI ACCTGC 1 cut(s) 89
BmcAI AGTACT 2 cut(s) 194, 998
BmeT110I CYCGRG 1 cut(s) 983
BmgBI CACGTC 1 cut(s) 685
BmiI GGNNCC 3 cut(s) 250, 337, 409
BmsI GCATC 4 cut(s) 626, 737, 961, 1117
BmtI GCTAGC 1 cut(s) 240
BpuEI CTTGAG 1 cut(s) 308
BsaAI YACGTR 1 cut(s) 21
BsaHI GRCGYC 1 cut(s) 408
BsaJI CCNNGG 6 cut(s) 241, 252, 541, 918, 956, 984
BsaXI ACNNNNNCTCC 6 cut(s) 237, 267, 635, 665, 980, 1010
BseDI CCNNGG 6 cut(s) 241, 252, 541, 918, 956, 984
BseGI GGATG 1 cut(s) 952
BseMII CTCAG 3 cut(s) 36, 85, 984
BseRI GAGGAG 3 cut(s) 261, 643, 1001
BseSI GKGCMC 1 cut(s) 637
BsgI GTGCAG 1 cut(s) 117
BshFI GGCC 2 cut(s) 898, 917
BshNI GGYRCC 1 cut(s) 407
BsiHKCI CYCGRG 1 cut(s) 983
BsmAI GTCTC 3 cut(s) 497, 675, 983
BsmBI CGTCTC 1 cut(s) 675
BsmI GAATGC 1 cut(s) 939
BsnI GGCC 2 cut(s) 898, 917
BsoBI CYCGRG 1 cut(s) 983
Bsp1286I GDGCHC 1 cut(s) 637
Bsp143I GATC 1 cut(s) 581
Bsp19I CCATGG 4 cut(s) 241, 541, 918, 956
BspACI CCGC 2 cut(s) 278, 587
BspANI GGCC 2 cut(s) 898, 917
BspCNI CTCAG 3 cut(s) 37, 84, 985
BspLI GGNNCC 3 cut(s) 250, 337, 409
BspMI ACCTGC 1 cut(s) 89
BspOI GCTAGC 1 cut(s) 240
BspPI GGATC 1 cut(s) 589
BspT107I GGYRCC 1 cut(s) 407
BssECI CCNNGG 6 cut(s) 241, 252, 541, 918, 956, 984
BssMI GATC 1 cut(s) 581
BssNI GRCGYC 1 cut(s) 408
BssT1I CCWWGG 4 cut(s) 241, 541, 918, 956
Bst4CI ACNGT 3 cut(s) 209, 349, 486
BstACI GRCGYC 1 cut(s) 408
BstBAI YACGTR 1 cut(s) 21
BstC8I GCNNGC 2 cut(s) 238, 1097
BstDEI CTNAG 3 cut(s) 45, 71, 993
BstDSI CCRYGG 5 cut(s) 241, 252, 541, 918, 956
BstEII GGTNACC 1 cut(s) 1008
BstF5I GGATG 1 cut(s) 952
BstH2I RGCGCY 1 cut(s) 411
BstHHI GCGC 1 cut(s) 410
BstKTI GATC 1 cut(s) 584
BstMAI GTCTC 3 cut(s) 497, 675, 983
BstMBI GATC 1 cut(s) 581
BstMWI GCNNNNNNNGC 2 cut(s) 860, 958
BstNSI RCATGY 1 cut(s) 1099
BstPI GGTNACC 1 cut(s) 1008
BstSLI GKGCMC 1 cut(s) 637
BstXI CCANNNNNNTGG 1 cut(s) 925
BsuRI GGCC 2 cut(s) 898, 917
BtgI CCRYGG 5 cut(s) 241, 252, 541, 918, 956
BtrI CACGTC 1 cut(s) 685
BtsCI GGATG 1 cut(s) 952
BtsI GCAGTG 1 cut(s) 720
BtsIMutI CAGTG 2 cut(s) 42, 720
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 2 cut(s) 238, 1097
CfoI GCGC 1 cut(s) 410
CseI GACGC 2 cut(s) 746, 815
Csp6I GTAC 6 cut(s) 40, 193, 532, 731, 997, 1074
CviAII CATG 9 cut(s) 242, 311, 542, 594, 904, 919, 957, 1096, 1131
CviQI GTAC 6 cut(s) 40, 193, 532, 731, 997, 1074
DdeI CTNAG 3 cut(s) 45, 71, 993
DinI GGCGCC 1 cut(s) 409
DpnI GATC 1 cut(s) 583
DpnII GATC 1 cut(s) 581
DraIII CACNNNGTG 1 cut(s) 48
EaeI YGGCCR 1 cut(s) 915
Eco130I CCWWGG 4 cut(s) 241, 541, 918, 956
Eco147I AGGCCT 1 cut(s) 898
Eco57I CTGAAG 2 cut(s) 528, 756
Eco72I CACGTG 1 cut(s) 21
Eco88I CYCGRG 1 cut(s) 983
Eco91I GGTNACC 1 cut(s) 1008
EcoO65I GGTNACC 1 cut(s) 1008
EcoRI GAATTC 1 cut(s) 360
EcoT14I CCWWGG 4 cut(s) 241, 541, 918, 956
EcoT22I ATGCAT 1 cut(s) 1132
EgeI GGCGCC 1 cut(s) 409
EheI GGCGCC 1 cut(s) 409
ErhI CCWWGG 4 cut(s) 241, 541, 918, 956
Esp3I CGTCTC 1 cut(s) 675
FaeI CATG 9 cut(s) 245, 314, 545, 597, 907, 922, 960, 1099, 1134
FalI AAGNNNNNCTT 2 cut(s) 179, 211
FatI CATG 9 cut(s) 241, 310, 541, 593, 903, 918, 956, 1095, 1130
FauNDI CATATG 1 cut(s) 1120
FokI GGATG 1 cut(s) 939
FspBI CTAG 7 cut(s) 57, 237, 521, 638, 752, 875, 1068
GlaI GCGC 1 cut(s) 409
HaeII RGCGCY 1 cut(s) 411
HaeIII GGCC 2 cut(s) 898, 917
HgaI GACGC 2 cut(s) 746, 815
HhaI GCGC 1 cut(s) 410
Hin1I GRCGYC 1 cut(s) 408
Hin1II CATG 9 cut(s) 245, 314, 545, 597, 907, 922, 960, 1099, 1134
Hin6I GCGC 1 cut(s) 408
HinP1I GCGC 1 cut(s) 408
HindIII AAGCTT 2 cut(s) 112, 1026
HinfI GANTC 1 cut(s) 322
HphI GGTGA 4 cut(s) 341, 576, 1002, 1061
Hpy166II GTNNAC 2 cut(s) 42, 352
Hpy188I TCNGA 3 cut(s) 74, 622, 1024
Hpy188III TCNNGA 4 cut(s) 133, 502, 680, 803
Hpy8I GTNNAC 2 cut(s) 42, 352
HpyAV CCTTC 6 cut(s) 162, 286, 326, 909, 923, 1055
HpyCH4III ACNGT 3 cut(s) 209, 349, 486
HpyCH4IV ACGT 2 cut(s) 20, 684
HpyCH4V TGCA 6 cut(s) 98, 314, 937, 971, 1099, 1130
HpyF10VI GCNNNNNNNGC 2 cut(s) 860, 958
HpyF3I CTNAG 3 cut(s) 45, 71, 993
HpySE526I ACGT 2 cut(s) 20, 684
Hsp92I GRCGYC 1 cut(s) 408
Hsp92II CATG 9 cut(s) 245, 314, 545, 597, 907, 922, 960, 1099, 1134
HspAI GCGC 1 cut(s) 408
KasI GGCGCC 1 cut(s) 407
Kzo9I GATC 1 cut(s) 581
LmnI GCTCC 2 cut(s) 248, 335
LpnPI CCDG 4 cut(s) 84, 381, 615, 747
LweI GCATC 4 cut(s) 626, 737, 961, 1117
MaeI CTAG 7 cut(s) 57, 237, 521, 638, 752, 875, 1068
MaeII ACGT 2 cut(s) 20, 684
MaeIII GTNAC 1 cut(s) 1008
MalI GATC 1 cut(s) 583
MboI GATC 1 cut(s) 581
MboII GAAGA 3 cut(s) 293, 622, 762
MhlI GDGCHC 1 cut(s) 637
MlsI TGGCCA 1 cut(s) 917
MluNI TGGCCA 1 cut(s) 917
Mly113I GGCGCC 1 cut(s) 408
MmeI TCCRAC 1 cut(s) 906
MnlI CCTC 8 cut(s) 80, 239, 433, 664, 817, 878, 883, 979
Mox20I TGGCCA 1 cut(s) 917
Mph1103I ATGCAT 1 cut(s) 1132
MroXI GAANNNNTTC 1 cut(s) 194
MscI TGGCCA 1 cut(s) 917
MseI TTAA 5 cut(s) 30, 215, 435, 1044, 1112
MslI CAYNNNNRTG 2 cut(s) 315, 471
Msp20I TGGCCA 1 cut(s) 917
MspA1I CMGCKG 1 cut(s) 278
Mva1269I GAATGC 1 cut(s) 939
MwoI GCNNNNNNNGC 2 cut(s) 860, 958
NarI GGCGCC 1 cut(s) 408
NcoI CCATGG 4 cut(s) 241, 541, 918, 956
NdeI CATATG 1 cut(s) 1120
NdeII GATC 1 cut(s) 581
NheI GCTAGC 1 cut(s) 236
NlaIII CATG 9 cut(s) 245, 314, 545, 597, 907, 922, 960, 1099, 1134
NlaIV GGNNCC 3 cut(s) 250, 337, 409
NmuCI GTSAC 1 cut(s) 1008
NsiI ATGCAT 1 cut(s) 1132
NspI RCATGY 1 cut(s) 1099
PaeI GCATGC 1 cut(s) 1099
PaqCI CACCTGC 1 cut(s) 89
PceI AGGCCT 1 cut(s) 898
PctI GAATGC 1 cut(s) 939
PdmI GAANNNNTTC 1 cut(s) 194
PfeI GAWTC 1 cut(s) 322
PluTI GGCGCC 1 cut(s) 411
PmaCI CACGTG 1 cut(s) 21
PmlI CACGTG 1 cut(s) 21
Ppu21I YACGTR 1 cut(s) 21
PspCI CACGTG 1 cut(s) 21
PspEI GGTNACC 1 cut(s) 1008
PspN4I GGNNCC 3 cut(s) 250, 337, 409
RsaI GTAC 6 cut(s) 41, 194, 533, 732, 998, 1075
RsaNI GTAC 6 cut(s) 40, 193, 532, 731, 997, 1074
RseI CAYNNNNRTG 2 cut(s) 315, 471
SaqAI TTAA 5 cut(s) 30, 215, 435, 1044, 1112
Sau3AI GATC 1 cut(s) 581
ScaI AGTACT 2 cut(s) 194, 998
SduI GDGCHC 1 cut(s) 637
SfaNI GCATC 4 cut(s) 626, 737, 961, 1117
SfoI GGCGCC 1 cut(s) 409
SmiMI CAYNNNNRTG 2 cut(s) 315, 471
SmlI CTYRAG 1 cut(s) 287
SmoI CTYRAG 1 cut(s) 287
SpeI ACTAGT 1 cut(s) 520
SphI GCATGC 1 cut(s) 1099
SseBI AGGCCT 1 cut(s) 898
SsiI CCGC 2 cut(s) 278, 587
SspDI GGCGCC 1 cut(s) 407
SspMI CTAG 7 cut(s) 57, 237, 521, 638, 752, 875, 1068
StuI AGGCCT 1 cut(s) 898
StyI CCWWGG 4 cut(s) 241, 541, 918, 956
TaaI ACNGT 3 cut(s) 209, 349, 486
TaiI ACGT 2 cut(s) 23, 687
TaqI TCGA 2 cut(s) 501, 679
TatI WGTACW 4 cut(s) 39, 192, 531, 996
TfiI GAWTC 1 cut(s) 322
Tru1I TTAA 5 cut(s) 30, 215, 435, 1044, 1112
Tru9I TTAA 5 cut(s) 30, 215, 435, 1044, 1112
TscAI CASTG 2 cut(s) 49, 727
TseFI GTSAC 1 cut(s) 1008
Tsp45I GTSAC 1 cut(s) 1008
TspDTI ATGAA 6 cut(s) 17, 70, 173, 582, 920, 1074
TspRI CASTG 2 cut(s) 49, 727
XapI RAATTY 5 cut(s) 4, 360, 798, 973, 1101
XceI RCATGY 1 cut(s) 1099
XcmI CCANNNNNNNNNTGG 1 cut(s) 910
XmnI GAANNNNTTC 1 cut(s) 194
XspI CTAG 7 cut(s) 57, 237, 521, 638, 752, 875, 1068
ZrmI AGTACT 2 cut(s) 194, 998
Zsp2I ATGCAT 1 cut(s) 1132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.