Rw3G024420

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000066
Physical Location & Seq
Forward (+)
31413323 .. 31414902
1580 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G024420.1

Sequence Viewer

Length: 1107 bp
ATGGCCTTGGTACATGGGAAAATGCTTCTTATGAAACTCACATTAGTCTTATTAGCAGCTGCAACGACATTGCTAGCTGCAGCAGCTGATAAACCCCTCCCACTGCCTCCACCGCCTCAAGCCAAGCCCAACTGCACAGACCGCTGTGGTGACCTCACAATTCCATATCCATTTGGCATCGGTGACGGCTGTTACATACTACTGAAGGGACAGGAAAAGCAATTCCAACTCACTTGTGATCATTCCACTAGACCCCCATCACTGATCTTTACGTACGCCAAAAGCCTCCGTGTCACTGATATTAATCTTTCTAAGGGTGTGTTGGAAGCTCTGGCTTTTATAGGCAAGGATTGTTACACCAAGATCGGATCTGATGGGGAGAAAACCGAATCTAAGCTCTGGTTGACTCGTCCTTACAGCATCTCTGGTTCTGAAAATAGGTTCTTCGCCGTAGGCTGCGACACTTACGCTGTTTTCAAGGGTTTTCGTGGTGAAGAAGAGCTCAGTTTAGGGTGCATGTCCGTGTGCCAGACCATCAGCAAAGCGGATCAAAACTCTTGCTCTGGTGTCGGGTGTTGCGAGGTCAAAATCCCTGAAGGACTGAAGAATCTTACTGTGACAGTGAGTAGCTATTACAGTCATAAGGAAATATGGAATTTTAATCCCTGCAGCTATGCCTTCCTTGTGCGAGATGGTTACTTTAACTTCAGTGGTGAGAGGAGTTTCAAACAGCTCAGGAACACAAATAAGATGCCGGTGATCTTTAATTGGCAGATTGGAAGTGAGACATGCGAGGTAGCTGAAAAGAATGCTGTGGATTATGCATGCAAGGCACATTCCAAATGTGTCGACCAGACCAAGGGCCCATACCCTGGTTACTATTGCCAGTGCTTAGACGGCTACGAAGGGAACCCATACATCGGTTGCCGAGATATTGACGAGTGTTTGGCTAAAATTAGTCCATGCGGGAATGGAACGTGCAAAAATTCACTTGGAAATTACTCTTGTAAATGTAATAAAGGGTTCAAAAATGATGGTCCTCTGAAGTGCATTGTTCGTCCCACGGCAAACAAGACTCTGAAGATTTCATTGGCTATCATTGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK cEGF

Protein Analysis

368

Amino Acids

40.39

Weight (kDa)

8.41

Isoelectric Point (pI)

33.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 45 - 106 1.9e-11 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 311 - 350 5.9e-07 Calcium-binding EGF domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 872
AccI GTMKAC 1 cut(s) 849
AciI CCGC 4 cut(s) 113, 142, 545, 966
AclWI GGATC 2 cut(s) 376, 555
AcsI RAATTY 2 cut(s) 655, 985
AcuI CTGAAG 6 cut(s) 224, 615, 623, 691, 1064, 1100
AfaI GTAC 2 cut(s) 12, 275
AfiI CCNNNNNNNGG 3 cut(s) 859, 872, 920
AgsI TTSAA 3 cut(s) 478, 727, 1027
AjnI CCWGG 1 cut(s) 871
AjuI GAANNNNNNNTTGG 2 cut(s) 1073, 1105
Alw21I GWGCWC 1 cut(s) 504
Alw26I GTCTC 1 cut(s) 779
AlwI GGATC 2 cut(s) 376, 555
AlwNI CAGNNNCTG 1 cut(s) 86
AoxI GGCC 2 cut(s) 3, 862
ApaI GGGCCC 1 cut(s) 866
ApeKI GCWGC 7 cut(s) 56, 59, 77, 80, 83, 456, 669
ApoI RAATTY 2 cut(s) 655, 985
AseI ATTAAT 1 cut(s) 303
AspS9I GGNCC 3 cut(s) 862, 863, 1037
AsuHPI GGTGA 5 cut(s) 161, 194, 503, 725, 769
AsuNHI GCTAGC 1 cut(s) 73
AvaII GGWCC 1 cut(s) 1037
BaeGI GKGCMC 1 cut(s) 866
BanII GRGCYC 2 cut(s) 504, 866
Bbv12I GWGCWC 1 cut(s) 504
BbvI GCAGC 7 cut(s) 46, 64, 68, 92, 95, 443, 681
BccI CCATC 5 cut(s) 265, 368, 542, 686, 1028
BceAI ACGGC 4 cut(s) 202, 434, 913, 1080
BciT130I CCWGG 1 cut(s) 873
BclI TGATCA 1 cut(s) 238
BcoDI GTCTC 1 cut(s) 779
BfaI CTAG 2 cut(s) 74, 249
BfmI CTRYAG 2 cut(s) 78, 667
BisI GCNGC 7 cut(s) 57, 60, 78, 81, 84, 457, 670
BlsI GCNGC 7 cut(s) 58, 61, 79, 82, 85, 458, 671
Bme1390I CCNGG 1 cut(s) 873
Bme18I GGWCC 1 cut(s) 1037
BmgT120I GGNCC 3 cut(s) 862, 863, 1037
BmiI GGNNCC 2 cut(s) 864, 911
BmrFI CCNGG 1 cut(s) 873
BmsI GCATC 3 cut(s) 186, 429, 741
BmtI GCTAGC 1 cut(s) 77
Bpu10I CCTNAGC 1 cut(s) 734
BpuEI CTTGAG 1 cut(s) 102
BsaAI YACGTR 1 cut(s) 273
BsaBI GATNNNNATC 1 cut(s) 303
BsaJI CCNNGG 4 cut(s) 6, 858, 871, 1062
Bsc4I CCNNNNNNNGG 3 cut(s) 859, 872, 920
Bse118I RCCGGY 1 cut(s) 754
Bse1I ACTGG 1 cut(s) 886
Bse3DI GCAATG 1 cut(s) 68
Bse8I GATNNNNATC 1 cut(s) 303
BseBI CCWGG 1 cut(s) 873
BseDI CCNNGG 4 cut(s) 6, 858, 871, 1062
BseJI GATNNNNATC 1 cut(s) 303
BseLI CCNNNNNNNGG 3 cut(s) 859, 872, 920
BseMI GCAATG 1 cut(s) 68
BseMII CTCAG 2 cut(s) 517, 748
BseNI ACTGG 1 cut(s) 886
BseRI GAGGAG 1 cut(s) 733
BseSI GKGCMC 1 cut(s) 866
BseXI GCAGC 7 cut(s) 46, 64, 68, 92, 95, 443, 681
BsgI GTGCAG 1 cut(s) 118
BshFI GGCC 2 cut(s) 5, 864
BsiHKAI GWGCWC 1 cut(s) 504
BsiSI CCGG 1 cut(s) 755
BsiWI CGTACG 1 cut(s) 273
BslFI GGGAC 2 cut(s) 222, 1044
BslI CCNNNNNNNGG 3 cut(s) 859, 872, 920
BsmAI GTCTC 1 cut(s) 779
BsmFI GGGAC 2 cut(s) 222, 1044
BsmI GAATGC 1 cut(s) 814
BsnI GGCC 2 cut(s) 5, 864
Bsp120I GGGCCC 1 cut(s) 862
Bsp1286I GDGCHC 2 cut(s) 504, 866
Bsp143I GATC 6 cut(s) 238, 264, 363, 368, 547, 759
BspACI CCGC 4 cut(s) 113, 142, 545, 966
BspANI GGCC 2 cut(s) 5, 864
BspCNI CTCAG 2 cut(s) 516, 747
BspLI GGNNCC 2 cut(s) 864, 911
BspMAI CTGCAG 2 cut(s) 82, 671
BspOI GCTAGC 1 cut(s) 77
BspPI GGATC 2 cut(s) 376, 555
BspQI GCTCTTC 1 cut(s) 492
BsrDI GCAATG 1 cut(s) 68
BsrFI RCCGGY 1 cut(s) 754
BsrI ACTGG 1 cut(s) 886
BssAI RCCGGY 1 cut(s) 754
BssECI CCNNGG 4 cut(s) 6, 858, 871, 1062
BssMI GATC 6 cut(s) 238, 264, 363, 368, 547, 759
BssT1I CCWWGG 2 cut(s) 6, 858
Bst2UI CCWGG 1 cut(s) 873
Bst4CI ACNGT 3 cut(s) 616, 622, 638
Bst6I CTCTTC 1 cut(s) 492
BstBAI YACGTR 1 cut(s) 273
BstC8I GCNNGC 2 cut(s) 75, 826
BstDEI CTNAG 5 cut(s) 312, 393, 503, 734, 892
BstDSI CCRYGG 1 cut(s) 1062
BstEII GGTNACC 1 cut(s) 149
BstKTI GATC 6 cut(s) 241, 267, 366, 371, 550, 762
BstMAI GTCTC 1 cut(s) 779
BstMBI GATC 6 cut(s) 238, 264, 363, 368, 547, 759
BstMWI GCNNNNNNNGC 5 cut(s) 83, 112, 141, 830, 897
BstNI CCWGG 1 cut(s) 873
BstNSI RCATGY 3 cut(s) 520, 792, 828
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 1 cut(s) 871
BstSFI CTRYAG 2 cut(s) 78, 667
BstSLI GKGCMC 1 cut(s) 866
BstSNI TACGTA 1 cut(s) 273
BstV1I GCAGC 7 cut(s) 46, 64, 68, 92, 95, 443, 681
BstX2I RGATCY 1 cut(s) 368
BstYI RGATCY 1 cut(s) 368
BsuRI GGCC 2 cut(s) 5, 864
BtgI CCRYGG 1 cut(s) 1062
BtsI GCAGTG 1 cut(s) 101
BtsIMutI CAGTG 6 cut(s) 101, 260, 294, 627, 715, 893
Cac8I GCNNGC 2 cut(s) 75, 826
CaiI CAGNNNCTG 1 cut(s) 86
Cfr10I RCCGGY 1 cut(s) 754
Cfr13I GGNCC 3 cut(s) 862, 863, 1037
Csp6I GTAC 2 cut(s) 11, 274
CviAII CATG 5 cut(s) 14, 517, 789, 825, 963
CviQI GTAC 2 cut(s) 11, 274
DdeI CTNAG 5 cut(s) 312, 393, 503, 734, 892
DpnI GATC 6 cut(s) 240, 266, 365, 370, 549, 761
DpnII GATC 6 cut(s) 238, 264, 363, 368, 547, 759
Eam1104I CTCTTC 1 cut(s) 492
EarI CTCTTC 1 cut(s) 492
Ecl136II GAGCTC 1 cut(s) 502
Eco105I TACGTA 1 cut(s) 273
Eco130I CCWWGG 2 cut(s) 6, 858
Eco24I GRGCYC 2 cut(s) 504, 866
Eco47I GGWCC 1 cut(s) 1037
Eco53kI GAGCTC 1 cut(s) 502
Eco57I CTGAAG 6 cut(s) 224, 615, 623, 691, 1064, 1100
Eco91I GGTNACC 1 cut(s) 149
EcoICRI GAGCTC 1 cut(s) 502
EcoO109I RGGNCCY 1 cut(s) 862
EcoO65I GGTNACC 1 cut(s) 149
EcoRII CCWGG 1 cut(s) 871
EcoT14I CCWWGG 2 cut(s) 6, 858
EcoT22I ATGCAT 1 cut(s) 826
EcoT38I GRGCYC 2 cut(s) 504, 866
ErhI CCWWGG 2 cut(s) 6, 858
FaeI CATG 5 cut(s) 17, 520, 792, 828, 966
FaqI GGGAC 2 cut(s) 222, 1044
FatI CATG 5 cut(s) 13, 516, 788, 824, 962
FauI CCCGC 1 cut(s) 959
FbaI TGATCA 1 cut(s) 238
FblI GTMKAC 1 cut(s) 849
Fnu4HI GCNGC 7 cut(s) 57, 60, 78, 81, 84, 457, 670
FriOI GRGCYC 2 cut(s) 504, 866
Fsp4HI GCNGC 7 cut(s) 57, 60, 78, 81, 84, 457, 670
FspBI CTAG 2 cut(s) 74, 249
GluI GCNGC 7 cut(s) 57, 60, 78, 81, 84, 457, 670
HaeIII GGCC 2 cut(s) 5, 864
HapII CCGG 1 cut(s) 755
Hin1II CATG 5 cut(s) 17, 520, 792, 828, 966
HincII GTYRAC 2 cut(s) 405, 850
HindII GTYRAC 2 cut(s) 405, 850
HinfI GANTC 4 cut(s) 389, 406, 607, 1075
HpaII CCGG 1 cut(s) 755
HphI GGTGA 5 cut(s) 161, 194, 503, 725, 769
Hpy166II GTNNAC 2 cut(s) 405, 850
Hpy188I TCNGA 5 cut(s) 368, 373, 433, 1044, 1080
Hpy188III TCNNGA 1 cut(s) 736
Hpy8I GTNNAC 2 cut(s) 405, 850
HpyAV CCTTC 4 cut(s) 199, 590, 688, 899
HpyCH4III ACNGT 3 cut(s) 616, 622, 638
HpyCH4IV ACGT 2 cut(s) 272, 977
HpyCH4V TGCA 9 cut(s) 62, 80, 135, 516, 669, 824, 828, 981, 1050
HpyF10VI GCNNNNNNNGC 5 cut(s) 83, 112, 141, 830, 897
HpyF3I CTNAG 5 cut(s) 312, 393, 503, 734, 892
HpySE526I ACGT 2 cut(s) 272, 977
Hsp92II CATG 5 cut(s) 17, 520, 792, 828, 966
Ksp22I TGATCA 1 cut(s) 238
Kzo9I GATC 6 cut(s) 238, 264, 363, 368, 547, 759
LguI GCTCTTC 1 cut(s) 492
Lsp1109I GCAGC 7 cut(s) 46, 64, 68, 92, 95, 443, 681
LweI GCATC 3 cut(s) 186, 429, 741
MaeI CTAG 2 cut(s) 74, 249
MaeII ACGT 2 cut(s) 272, 977
MaeIII GTNAC 8 cut(s) 149, 182, 191, 292, 353, 616, 695, 875
MalI GATC 6 cut(s) 240, 266, 365, 370, 549, 761
MboI GATC 6 cut(s) 238, 264, 363, 368, 547, 759
MboII GAAGA 5 cut(s) 436, 506, 509, 616, 1093
MflI RGATCY 1 cut(s) 368
MhlI GDGCHC 2 cut(s) 504, 866
MluCI AATT 7 cut(s) 159, 221, 655, 766, 954, 985, 997
MlyI GAGTC 2 cut(s) 400, 1069
MmeI TCCRAC 2 cut(s) 250, 303
MnlI CCTC 9 cut(s) 107, 117, 126, 164, 296, 574, 711, 787, 1050
Mph1103I ATGCAT 1 cut(s) 826
MseI TTAA 4 cut(s) 303, 660, 702, 765
MslI CAYNNNNRTG 1 cut(s) 521
MspA1I CMGCKG 3 cut(s) 59, 86, 144
MspI CCGG 1 cut(s) 755
MspR9I CCNGG 1 cut(s) 873
Mva1269I GAATGC 1 cut(s) 814
MvaI CCWGG 1 cut(s) 873
MwoI GCNNNNNNNGC 5 cut(s) 83, 112, 141, 830, 897
NdeII GATC 6 cut(s) 238, 264, 363, 368, 547, 759
NheI GCTAGC 1 cut(s) 73
NlaIII CATG 5 cut(s) 17, 520, 792, 828, 966
NlaIV GGNNCC 2 cut(s) 864, 911
NmeAIII GCCGAG 1 cut(s) 953
NmuCI GTSAC 4 cut(s) 149, 182, 292, 616
NsiI ATGCAT 1 cut(s) 826
NspI RCATGY 3 cut(s) 520, 792, 828
PaeI GCATGC 1 cut(s) 828
PciSI GCTCTTC 1 cut(s) 492
PcsI WCGNNNNNNNCGW 1 cut(s) 576
PctI GAATGC 1 cut(s) 814
PfeI GAWTC 2 cut(s) 389, 607
Pfl23II CGTACG 1 cut(s) 273
PflMI CCANNNNNTGG 1 cut(s) 872
PkrI GCNGC 7 cut(s) 58, 61, 79, 82, 85, 458, 671
PleI GAGTC 2 cut(s) 400, 1069
PpsI GAGTC 2 cut(s) 400, 1069
Ppu21I YACGTR 1 cut(s) 273
PshBI ATTAAT 1 cut(s) 303
Psp124BI GAGCTC 1 cut(s) 504
Psp6I CCWGG 1 cut(s) 871
PspEI GGTNACC 1 cut(s) 149
PspGI CCWGG 1 cut(s) 871
PspLI CGTACG 1 cut(s) 273
PspN4I GGNNCC 2 cut(s) 864, 911
PspOMI GGGCCC 1 cut(s) 862
PspPI GGNCC 3 cut(s) 862, 863, 1037
PstI CTGCAG 2 cut(s) 82, 671
PstNI CAGNNNCTG 1 cut(s) 86
PsuI RGATCY 1 cut(s) 368
PvuII CAGCTG 2 cut(s) 59, 86
RsaI GTAC 2 cut(s) 12, 275
RsaNI GTAC 2 cut(s) 11, 274
RseI CAYNNNNRTG 1 cut(s) 521
SacI GAGCTC 1 cut(s) 504
SalI GTCGAC 1 cut(s) 848
SapI GCTCTTC 1 cut(s) 492
SaqAI TTAA 4 cut(s) 303, 660, 702, 765
SatI GCNGC 7 cut(s) 57, 60, 78, 81, 84, 457, 670
Sau3AI GATC 6 cut(s) 238, 264, 363, 368, 547, 759
Sau96I GGNCC 3 cut(s) 862, 863, 1037
SchI GAGTC 2 cut(s) 400, 1069
ScrFI CCNGG 1 cut(s) 873
SduI GDGCHC 2 cut(s) 504, 866
SfaNI GCATC 3 cut(s) 186, 429, 741
SfcI CTRYAG 2 cut(s) 78, 667
SinI GGWCC 1 cut(s) 1037
SmiMI CAYNNNNRTG 1 cut(s) 521
SmlI CTYRAG 1 cut(s) 117
SmoI CTYRAG 1 cut(s) 117
SnaBI TACGTA 1 cut(s) 273
SphI GCATGC 1 cut(s) 828
Sse9I AATT 7 cut(s) 159, 221, 655, 766, 954, 985, 997
SsiI CCGC 4 cut(s) 113, 142, 545, 966
SspMI CTAG 2 cut(s) 74, 249
SstI GAGCTC 1 cut(s) 504
StyD4I CCNGG 1 cut(s) 871
StyI CCWWGG 2 cut(s) 6, 858
TaaI ACNGT 3 cut(s) 616, 622, 638
TaiI ACGT 2 cut(s) 275, 980
TaqI TCGA 1 cut(s) 849
TasI AATT 7 cut(s) 159, 221, 655, 766, 954, 985, 997
TfiI GAWTC 2 cut(s) 389, 607
Tru1I TTAA 4 cut(s) 303, 660, 702, 765
Tru9I TTAA 4 cut(s) 303, 660, 702, 765
TscAI CASTG 6 cut(s) 108, 267, 301, 627, 715, 893
TseFI GTSAC 4 cut(s) 149, 182, 292, 616
TseI GCWGC 7 cut(s) 56, 59, 77, 80, 83, 456, 669
Tsp45I GTSAC 4 cut(s) 149, 182, 292, 616
TspDTI ATGAA 2 cut(s) 47, 1077
TspGWI ACGGA 2 cut(s) 278, 511
TspRI CASTG 6 cut(s) 108, 267, 301, 627, 715, 893
Van91I CCANNNNNTGG 1 cut(s) 872
VpaK11BI GGWCC 1 cut(s) 1037
VspI ATTAAT 1 cut(s) 303
XapI RAATTY 2 cut(s) 655, 985
XceI RCATGY 3 cut(s) 520, 792, 828
XmiI GTMKAC 1 cut(s) 849
XspI CTAG 2 cut(s) 74, 249
Zsp2I ATGCAT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.