Wall-associated receptor kinase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| GUB_WAK_bind | PF13947 | 40 - 110 | 1.2e-07 | Wall-associated receptor kinase galacturonan-binding |
| EGF_CA | PF07645 | 334 - 373 | 5.3e-07 | Calcium-binding EGF domain |
| EGF_3 | PF12947 | 342 - 372 | 5.6e-07 | EGF domain |
| EGF | PF00008 | 344 - 370 | 2.1e-06 | EGF-like domain |
| Pkinase | PF00069 | 466 - 738 | 6.7e-45 | Protein kinase domain |
| PK_Tyr_Ser-Thr | PF07714 | 470 - 741 | 1.2e-46 | Protein tyrosine and serine/threonine kinase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 54, 1238 |
| AarI | CACCTGC | 2 cut(s) | 1088, 1659 |
| Acc36I | ACCTGC | 3 cut(s) | 1088, 1659, 2203 |
| AccI | GTMKAC | 1 cut(s) | 357 |
| AccII | CGCG | 1 cut(s) | 554 |
| AclWI | GGATC | 3 cut(s) | 142, 507, 1907 |
| AcoI | YGGCCR | 3 cut(s) | 1047, 1417, 2109 |
| AcsI | RAATTY | 4 cut(s) | 1293, 1517, 1619, 2091 |
| AcyI | GRCGYC | 1 cut(s) | 2003 |
| AfaI | GTAC | 5 cut(s) | 18, 163, 592, 1928, 2229 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 638, 1482, 1564 |
| AflIII | ACRYGT | 1 cut(s) | 587 |
| AgsI | TTSAA | 7 cut(s) | 184, 353, 769, 924, 1280, 1848, 2090 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2230 |
| AhlI | ACTAGT | 1 cut(s) | 13 |
| AjnI | CCWGG | 5 cut(s) | 112, 403, 520, 934, 1066 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 613, 645 |
| AluBI | AGCT | 8 cut(s) | 257, 869, 1044, 1375, 1718, 1844, 1987, 2221 |
| AluI | AGCT | 8 cut(s) | 257, 869, 1044, 1375, 1718, 1844, 1987, 2221 |
| Alw21I | GWGCWC | 1 cut(s) | 1377 |
| Alw26I | GTCTC | 6 cut(s) | 356, 539, 920, 1101, 1586, 1709 |
| AlwI | GGATC | 3 cut(s) | 142, 507, 1907 |
| Ama87I | CYCGRG | 1 cut(s) | 169 |
| AoxI | GGCC | 5 cut(s) | 816, 1047, 1417, 1731, 2109 |
| ApaI | GGGCCC | 1 cut(s) | 1735 |
| ApeKI | GCWGC | 7 cut(s) | 71, 74, 117, 513, 516, 556, 1715 |
| ApoI | RAATTY | 4 cut(s) | 1293, 1517, 1619, 2091 |
| AseI | ATTAAT | 1 cut(s) | 2009 |
| AspLEI | GCGC | 2 cut(s) | 447, 556 |
| AspS9I | GGNCC | 6 cut(s) | 248, 817, 932, 1485, 1731, 1732 |
| AsuC2I | CCSGG | 2 cut(s) | 170, 171 |
| AsuHPI | GGTGA | 4 cut(s) | 448, 842, 1069, 1547 |
| AsuII | TTCGAA | 1 cut(s) | 2016 |
| AsuNHI | GCTAGC | 2 cut(s) | 1016, 2150 |
| AvaI | CYCGRG | 1 cut(s) | 169 |
| AvaII | GGWCC | 3 cut(s) | 248, 932, 1485 |
| BaeGI | GKGCMC | 1 cut(s) | 1735 |
| BalI | TGGCCA | 1 cut(s) | 1419 |
| BanII | GRGCYC | 2 cut(s) | 1377, 1735 |
| BbsI | GAAGAC | 3 cut(s) | 399, 1255, 1793 |
| Bbv12I | GWGCWC | 1 cut(s) | 1377 |
| BbvI | GCAGC | 7 cut(s) | 83, 86, 104, 525, 528, 543, 1727 |
| BccI | CCATC | 2 cut(s) | 1146, 1345 |
| BceAI | ACGGC | 1 cut(s) | 2096 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 460, 494 |
| BciT130I | CCWGG | 5 cut(s) | 114, 405, 522, 936, 1068 |
| BciVI | GTATCC | 1 cut(s) | 1091 |
| BclI | TGATCA | 1 cut(s) | 2119 |
| BcnI | CCSGG | 2 cut(s) | 170, 171 |
| BcoDI | GTCTC | 6 cut(s) | 356, 539, 920, 1101, 1586, 1709 |
| BcuI | ACTAGT | 1 cut(s) | 13 |
| BfaI | CTAG | 7 cut(s) | 14, 800, 1017, 1205, 1979, 2151, 2222 |
| BfuAI | ACCTGC | 3 cut(s) | 1088, 1659, 2203 |
| BfuI | GTATCC | 1 cut(s) | 1091 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1425 |
| BglII | AGATCT | 1 cut(s) | 784 |
| BlpI | GCTNAGC | 1 cut(s) | 121 |
| BmcAI | AGTACT | 1 cut(s) | 18 |
| Bme1390I | CCNGG | 7 cut(s) | 114, 170, 171, 405, 522, 936, 1068 |
| Bme18I | GGWCC | 3 cut(s) | 248, 932, 1485 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2230 |
| BmeT110I | CYCGRG | 1 cut(s) | 169 |
| BmgT120I | GGNCC | 6 cut(s) | 248, 817, 932, 1485, 1731, 1732 |
| BmiI | GGNNCC | 3 cut(s) | 819, 1732, 1733 |
| BmrFI | CCNGG | 7 cut(s) | 114, 170, 171, 405, 522, 936, 1068 |
| BmsI | GCATC | 4 cut(s) | 562, 983, 1065, 1663 |
| BmtI | GCTAGC | 2 cut(s) | 1020, 2154 |
| BpiI | GAAGAC | 3 cut(s) | 399, 1255, 1793 |
| BpmI | CTGGAG | 1 cut(s) | 1089 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 121 |
| Bpu14I | TTCGAA | 1 cut(s) | 2016 |
| BpuEI | CTTGAG | 3 cut(s) | 421, 1024, 1691 |
| BpuMI | CCSGG | 2 cut(s) | 170, 171 |
| BsaBI | GATNNNNATC | 1 cut(s) | 675 |
| BsaHI | GRCGYC | 1 cut(s) | 2003 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 755, 785 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 638, 1482, 1564 |
| Bse1I | ACTGG | 5 cut(s) | 102, 370, 1132, 1604, 1936 |
| Bse3DI | GCAATG | 3 cut(s) | 376, 1435, 1567 |
| Bse8I | GATNNNNATC | 1 cut(s) | 675 |
| BseBI | CCWGG | 5 cut(s) | 114, 405, 522, 936, 1068 |
| BseGI | GGATG | 6 cut(s) | 548, 628, 998, 1337, 1654, 2122 |
| BseJI | GATNNNNATC | 1 cut(s) | 675 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 638, 1482, 1564 |
| BseMI | GCAATG | 3 cut(s) | 376, 1435, 1567 |
| BseMII | CTCAG | 2 cut(s) | 135, 1886 |
| BseNI | ACTGG | 5 cut(s) | 102, 370, 1132, 1604, 1936 |
| BseRI | GAGGAG | 1 cut(s) | 974 |
| BseSI | GKGCMC | 1 cut(s) | 1735 |
| BseXI | GCAGC | 7 cut(s) | 83, 86, 104, 525, 528, 543, 1727 |
| BseYI | CCCAGC | 1 cut(s) | 1727 |
| BsgI | GTGCAG | 2 cut(s) | 882, 1066 |
| Bsh1236I | CGCG | 1 cut(s) | 554 |
| BshFI | GGCC | 5 cut(s) | 818, 1049, 1419, 1733, 2111 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1377 |
| BsiHKCI | CYCGRG | 1 cut(s) | 169 |
| BsiSI | CCGG | 2 cut(s) | 170, 1122 |
| BslFI | GGGAC | 1 cut(s) | 1309 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 638, 1482, 1564 |
| BsmAI | GTCTC | 6 cut(s) | 356, 539, 920, 1101, 1586, 1709 |
| BsmBI | CGTCTC | 2 cut(s) | 1101, 1709 |
| BsmFI | GGGAC | 1 cut(s) | 1309 |
| BsmI | GAATGC | 1 cut(s) | 2084 |
| BsnI | GGCC | 5 cut(s) | 818, 1049, 1419, 1733, 2111 |
| BsoBI | CYCGRG | 1 cut(s) | 169 |
| Bsp119I | TTCGAA | 1 cut(s) | 2016 |
| Bsp120I | GGGCCC | 1 cut(s) | 1731 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1377, 1735 |
| Bsp1407I | TGTACA | 1 cut(s) | 1926 |
| Bsp143I | GATC | 7 cut(s) | 134, 499, 719, 784, 1710, 1912, 2119 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 121 |
| Bsp19I | CCATGG | 1 cut(s) | 988 |
| BspANI | GGCC | 5 cut(s) | 818, 1049, 1419, 1733, 2111 |
| BspCNI | CTCAG | 2 cut(s) | 134, 1885 |
| BspFNI | CGCG | 1 cut(s) | 554 |
| BspHI | TCATGA | 1 cut(s) | 1314 |
| BspLI | GGNNCC | 3 cut(s) | 819, 1732, 1733 |
| BspMI | ACCTGC | 3 cut(s) | 1088, 1659, 2203 |
| BspOI | GCTAGC | 2 cut(s) | 1020, 2154 |
| BspPI | GGATC | 3 cut(s) | 142, 507, 1907 |
| BspT104I | TTCGAA | 1 cut(s) | 2016 |
| BsrDI | GCAATG | 3 cut(s) | 376, 1435, 1567 |
| BsrGI | TGTACA | 1 cut(s) | 1926 |
| BsrI | ACTGG | 5 cut(s) | 102, 370, 1132, 1604, 1936 |
| BssMI | GATC | 7 cut(s) | 134, 499, 719, 784, 1710, 1912, 2119 |
| BssNI | GRCGYC | 1 cut(s) | 2003 |
| BssT1I | CCWWGG | 4 cut(s) | 967, 988, 1420, 1488 |
| Bst2UI | CCWGG | 5 cut(s) | 114, 405, 522, 936, 1068 |
| Bst4CI | ACNGT | 9 cut(s) | 463, 496, 1213, 1289, 1438, 1803, 1931, 2038, 2232 |
| Bst6I | CTCTTC | 1 cut(s) | 2013 |
| BstACI | GRCGYC | 1 cut(s) | 2003 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 345 |
| BstAUI | TGTACA | 1 cut(s) | 1926 |
| BstBI | TTCGAA | 1 cut(s) | 2016 |
| BstC8I | GCNNGC | 5 cut(s) | 892, 1018, 1645, 1763, 2152 |
| BstDEI | CTNAG | 4 cut(s) | 121, 1157, 1872, 2044 |
| BstDSI | CCRYGG | 2 cut(s) | 988, 2112 |
| BstEII | GGTNACC | 1 cut(s) | 962 |
| BstF5I | GGATG | 6 cut(s) | 548, 628, 998, 1337, 1654, 2122 |
| BstFNI | CGCG | 1 cut(s) | 554 |
| BstHHI | GCGC | 2 cut(s) | 447, 556 |
| BstKTI | GATC | 7 cut(s) | 137, 502, 722, 787, 1713, 1915, 2122 |
| BstMAI | GTCTC | 6 cut(s) | 356, 539, 920, 1101, 1586, 1709 |
| BstMBI | GATC | 7 cut(s) | 134, 499, 719, 784, 1710, 1912, 2119 |
| BstNI | CCWGG | 5 cut(s) | 114, 405, 522, 936, 1068 |
| BstNSI | RCATGY | 4 cut(s) | 894, 1056, 1273, 1765 |
| BstPI | GGTNACC | 1 cut(s) | 962 |
| BstSCI | CCNGG | 7 cut(s) | 112, 168, 169, 403, 520, 934, 1066 |
| BstSLI | GKGCMC | 1 cut(s) | 1735 |
| BstUI | CGCG | 1 cut(s) | 554 |
| BstV1I | GCAGC | 7 cut(s) | 83, 86, 104, 525, 528, 543, 1727 |
| BstV2I | GAAGAC | 3 cut(s) | 399, 1255, 1793 |
| BstX2I | RGATCY | 3 cut(s) | 134, 784, 1912 |
| BstYI | RGATCY | 3 cut(s) | 134, 784, 1912 |
| BsuI | GTATCC | 1 cut(s) | 1091 |
| BsuRI | GGCC | 5 cut(s) | 818, 1049, 1419, 1733, 2111 |
| BtgI | CCRYGG | 2 cut(s) | 988, 2112 |
| BtsCI | GGATG | 6 cut(s) | 548, 628, 998, 1337, 1654, 2122 |
| BtsI | GCAGTG | 1 cut(s) | 2055 |
| BtsIMutI | CAGTG | 2 cut(s) | 1611, 2055 |
| BveI | ACCTGC | 3 cut(s) | 1088, 1659, 2203 |
| Cac8I | GCNNGC | 5 cut(s) | 892, 1018, 1645, 1763, 2152 |
| CciI | TCATGA | 1 cut(s) | 1314 |
| CfoI | GCGC | 2 cut(s) | 447, 556 |
| Cfr13I | GGNCC | 6 cut(s) | 248, 817, 932, 1485, 1731, 1732 |
| Cfr9I | CCCGGG | 1 cut(s) | 169 |
| CseI | GACGC | 4 cut(s) | 296, 898, 1691, 2011 |
| Csp6I | GTAC | 5 cut(s) | 17, 162, 591, 1927, 2228 |
| CviQI | GTAC | 5 cut(s) | 17, 162, 591, 1927, 2228 |
| DdeI | CTNAG | 4 cut(s) | 121, 1157, 1872, 2044 |
| DpnI | GATC | 7 cut(s) | 136, 501, 721, 786, 1712, 1914, 2121 |
| DpnII | GATC | 7 cut(s) | 134, 499, 719, 784, 1710, 1912, 2119 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2230 |
| EaeI | YGGCCR | 3 cut(s) | 1047, 1417, 2109 |
| Eam1104I | CTCTTC | 1 cut(s) | 2013 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2230 |
| EarI | CTCTTC | 1 cut(s) | 2013 |
| Ecl136II | GAGCTC | 1 cut(s) | 1375 |
| Eco130I | CCWWGG | 4 cut(s) | 967, 988, 1420, 1488 |
| Eco24I | GRGCYC | 2 cut(s) | 1377, 1735 |
| Eco32I | GATATC | 1 cut(s) | 1003 |
| Eco47I | GGWCC | 3 cut(s) | 248, 932, 1485 |
| Eco53kI | GAGCTC | 1 cut(s) | 1375 |
| Eco88I | CYCGRG | 1 cut(s) | 169 |
| Eco91I | GGTNACC | 1 cut(s) | 962 |
| EcoICRI | GAGCTC | 1 cut(s) | 1375 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1731, 1732 |
| EcoO65I | GGTNACC | 1 cut(s) | 962 |
| EcoRI | GAATTC | 2 cut(s) | 1517, 1619 |
| EcoRII | CCWGG | 5 cut(s) | 112, 403, 520, 934, 1066 |
| EcoRV | GATATC | 1 cut(s) | 1003 |
| EcoT14I | CCWWGG | 4 cut(s) | 967, 988, 1420, 1488 |
| EcoT22I | ATGCAT | 2 cut(s) | 892, 1058 |
| EcoT38I | GRGCYC | 2 cut(s) | 1377, 1735 |
| ErhI | CCWWGG | 4 cut(s) | 967, 988, 1420, 1488 |
| Esp3I | CGTCTC | 2 cut(s) | 1101, 1709 |
| FaqI | GGGAC | 1 cut(s) | 1309 |
| FauI | CCCGC | 1 cut(s) | 227 |
| FbaI | TGATCA | 1 cut(s) | 2119 |
| FblI | GTMKAC | 1 cut(s) | 357 |
| FokI | GGATG | 6 cut(s) | 535, 615, 1005, 1324, 1641, 2129 |
| FriOI | GRGCYC | 2 cut(s) | 1377, 1735 |
| FspBI | CTAG | 7 cut(s) | 14, 800, 1017, 1205, 1979, 2151, 2222 |
| GlaI | GCGC | 2 cut(s) | 446, 555 |
| GsaI | CCCAGC | 1 cut(s) | 1731 |
| GsuI | CTGGAG | 1 cut(s) | 1089 |
| HaeIII | GGCC | 5 cut(s) | 818, 1049, 1419, 1733, 2111 |
| HapII | CCGG | 2 cut(s) | 170, 1122 |
| HgaI | GACGC | 4 cut(s) | 296, 898, 1691, 2011 |
| HhaI | GCGC | 2 cut(s) | 447, 556 |
| Hin1I | GRCGYC | 1 cut(s) | 2003 |
| Hin6I | GCGC | 2 cut(s) | 445, 554 |
| HinP1I | GCGC | 2 cut(s) | 445, 554 |
| HincII | GTYRAC | 4 cut(s) | 358, 1878, 1941, 2041 |
| HindII | GTYRAC | 4 cut(s) | 358, 1878, 1941, 2041 |
| HindIII | AAGCTT | 1 cut(s) | 255 |
| HinfI | GANTC | 5 cut(s) | 600, 847, 874, 1251, 1449 |
| HpaII | CCGG | 2 cut(s) | 170, 1122 |
| HphI | GGTGA | 4 cut(s) | 448, 842, 1069, 1547 |
| Hpy166II | GTNNAC | 7 cut(s) | 358, 456, 591, 1441, 1878, 1941, 2041 |
| Hpy188III | TCNNGA | 6 cut(s) | 311, 830, 1315, 1708, 1916, 2096 |
| Hpy8I | GTNNAC | 7 cut(s) | 358, 456, 591, 1441, 1878, 1941, 2041 |
| Hpy99I | CGWCG | 4 cut(s) | 191, 362, 467, 2102 |
| HpyAV | CCTTC | 7 cut(s) | 239, 261, 752, 1088, 1108, 1819, 2197 |
| HpyCH4III | ACNGT | 9 cut(s) | 463, 496, 1213, 1289, 1438, 1803, 1931, 2038, 2232 |
| HpyCH4IV | ACGT | 5 cut(s) | 328, 587, 609, 1673, 2226 |
| HpyF3I | CTNAG | 4 cut(s) | 121, 1157, 1872, 2044 |
| HpySE526I | ACGT | 5 cut(s) | 328, 587, 609, 1673, 2226 |
| Hsp92I | GRCGYC | 1 cut(s) | 2003 |
| HspAI | GCGC | 2 cut(s) | 445, 554 |
| Ksp22I | TGATCA | 1 cut(s) | 2119 |
| Kzo9I | GATC | 7 cut(s) | 134, 499, 719, 784, 1710, 1912, 2119 |
| LmnI | GCTCC | 5 cut(s) | 46, 62, 304, 1841, 1984 |
| Lsp1109I | GCAGC | 7 cut(s) | 83, 86, 104, 525, 528, 543, 1727 |
| LweI | GCATC | 4 cut(s) | 562, 983, 1065, 1663 |
| MaeI | CTAG | 7 cut(s) | 14, 800, 1017, 1205, 1979, 2151, 2222 |
| MaeII | ACGT | 5 cut(s) | 328, 587, 609, 1673, 2226 |
| MaeIII | GTNAC | 9 cut(s) | 176, 373, 748, 962, 1075, 1207, 1299, 1406, 1496 |
| MalI | GATC | 7 cut(s) | 136, 501, 721, 786, 1712, 1914, 2121 |
| MboI | GATC | 7 cut(s) | 134, 499, 719, 784, 1710, 1912, 2119 |
| MboII | GAAGA | 9 cut(s) | 254, 404, 722, 767, 1260, 1798, 2030, 2084, 2087 |
| MfeI | CAATTG | 2 cut(s) | 856, 1899 |
| MflI | RGATCY | 3 cut(s) | 134, 784, 1912 |
| MhlI | GDGCHC | 2 cut(s) | 1377, 1735 |
| MlsI | TGGCCA | 1 cut(s) | 1419 |
| MluNI | TGGCCA | 1 cut(s) | 1419 |
| MlyI | GAGTC | 3 cut(s) | 883, 1245, 1458 |
| MmeI | TCCRAC | 2 cut(s) | 24, 282 |
| Mox20I | TGGCCA | 1 cut(s) | 1419 |
| Mph1103I | ATGCAT | 2 cut(s) | 892, 1058 |
| MscI | TGGCCA | 1 cut(s) | 1419 |
| MseI | TTAA | 5 cut(s) | 1028, 1479, 1569, 2009, 2171 |
| MslI | CAYNNNNRTG | 5 cut(s) | 633, 1199, 1560, 1690, 1779 |
| Msp20I | TGGCCA | 1 cut(s) | 1419 |
| MspA1I | CMGCKG | 1 cut(s) | 1718 |
| MspI | CCGG | 2 cut(s) | 170, 1122 |
| MspR9I | CCNGG | 7 cut(s) | 114, 170, 171, 405, 522, 936, 1068 |
| MunI | CAATTG | 2 cut(s) | 856, 1899 |
| Mva1269I | GAATGC | 1 cut(s) | 2084 |
| MvaI | CCWGG | 5 cut(s) | 114, 405, 522, 936, 1068 |
| MvnI | CGCG | 1 cut(s) | 554 |
| NciI | CCSGG | 2 cut(s) | 170, 171 |
| NcoI | CCATGG | 1 cut(s) | 988 |
| NdeII | GATC | 7 cut(s) | 134, 499, 719, 784, 1710, 1912, 2119 |
| NheI | GCTAGC | 2 cut(s) | 1016, 2150 |
| NlaIV | GGNNCC | 3 cut(s) | 819, 1732, 1733 |
| NmeAIII | GCCGAG | 1 cut(s) | 1025 |
| NmuCI | GTSAC | 5 cut(s) | 373, 748, 1075, 1207, 1496 |
| NsiI | ATGCAT | 2 cut(s) | 892, 1058 |
| NspI | RCATGY | 4 cut(s) | 894, 1056, 1273, 1765 |
| NspV | TTCGAA | 1 cut(s) | 2016 |
| PaeI | GCATGC | 2 cut(s) | 894, 1765 |
| PagI | TCATGA | 1 cut(s) | 1314 |
| PaqCI | CACCTGC | 2 cut(s) | 1088, 1659 |
| PctI | GAATGC | 1 cut(s) | 2084 |
| PfeI | GAWTC | 2 cut(s) | 600, 847 |
| PflFI | GACNNNGTC | 1 cut(s) | 1675 |
| PleI | GAGTC | 3 cut(s) | 882, 1245, 1457 |
| PpsI | GAGTC | 3 cut(s) | 882, 1245, 1457 |
| PshBI | ATTAAT | 1 cut(s) | 2009 |
| PsiI | TTATAA | 2 cut(s) | 54, 1238 |
| Psp124BI | GAGCTC | 1 cut(s) | 1377 |
| Psp6I | CCWGG | 5 cut(s) | 112, 403, 520, 934, 1066 |
| PspEI | GGTNACC | 1 cut(s) | 962 |
| PspFI | CCCAGC | 1 cut(s) | 1727 |
| PspGI | CCWGG | 5 cut(s) | 112, 403, 520, 934, 1066 |
| PspN4I | GGNNCC | 3 cut(s) | 819, 1732, 1733 |
| PspOMI | GGGCCC | 1 cut(s) | 1731 |
| PspPI | GGNCC | 6 cut(s) | 248, 817, 932, 1485, 1731, 1732 |
| PsuI | RGATCY | 3 cut(s) | 134, 784, 1912 |
| PsyI | GACNNNGTC | 1 cut(s) | 1675 |
| PvuII | CAGCTG | 1 cut(s) | 1718 |
| RsaI | GTAC | 5 cut(s) | 18, 163, 592, 1928, 2229 |
| RsaNI | GTAC | 5 cut(s) | 17, 162, 591, 1927, 2228 |
| RseI | CAYNNNNRTG | 5 cut(s) | 633, 1199, 1560, 1690, 1779 |
| SacI | GAGCTC | 1 cut(s) | 1377 |
| SalI | GTCGAC | 1 cut(s) | 356 |
| SaqAI | TTAA | 5 cut(s) | 1028, 1479, 1569, 2009, 2171 |
| Sau3AI | GATC | 7 cut(s) | 134, 499, 719, 784, 1710, 1912, 2119 |
| Sau96I | GGNCC | 6 cut(s) | 248, 817, 932, 1485, 1731, 1732 |
| ScaI | AGTACT | 1 cut(s) | 18 |
| SchI | GAGTC | 3 cut(s) | 883, 1245, 1458 |
| ScrFI | CCNGG | 7 cut(s) | 114, 170, 171, 405, 522, 936, 1068 |
| SduI | GDGCHC | 2 cut(s) | 1377, 1735 |
| SfaNI | GCATC | 4 cut(s) | 562, 983, 1065, 1663 |
| SfuI | TTCGAA | 1 cut(s) | 2016 |
| SinI | GGWCC | 3 cut(s) | 248, 932, 1485 |
| SmaI | CCCGGG | 1 cut(s) | 171 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 633, 1199, 1560, 1690, 1779 |
| SmlI | CTYRAG | 3 cut(s) | 436, 1039, 1706 |
| SmoI | CTYRAG | 3 cut(s) | 436, 1039, 1706 |
| SpeI | ACTAGT | 1 cut(s) | 13 |
| SphI | GCATGC | 2 cut(s) | 894, 1765 |
| SspI | AATATT | 2 cut(s) | 1359, 2013 |
| SspMI | CTAG | 7 cut(s) | 14, 800, 1017, 1205, 1979, 2151, 2222 |
| SstI | GAGCTC | 1 cut(s) | 1377 |
| StyD4I | CCNGG | 7 cut(s) | 112, 168, 169, 403, 520, 934, 1066 |
| StyI | CCWWGG | 4 cut(s) | 967, 988, 1420, 1488 |
| TaaI | ACNGT | 9 cut(s) | 463, 496, 1213, 1289, 1438, 1803, 1931, 2038, 2232 |
| TaiI | ACGT | 5 cut(s) | 331, 590, 612, 1676, 2229 |
| TaqI | TCGA | 6 cut(s) | 357, 603, 831, 2016, 2026, 2097 |
| TaqII | GACCGA | 1 cut(s) | 1515 |
| TatI | WGTACW | 2 cut(s) | 16, 1926 |
| TauI | GCSGC | 6 cut(s) | 228, 231, 234, 818, 957, 2216 |
| TfiI | GAWTC | 2 cut(s) | 600, 847 |
| Tru1I | TTAA | 5 cut(s) | 1028, 1479, 1569, 2009, 2171 |
| Tru9I | TTAA | 5 cut(s) | 1028, 1479, 1569, 2009, 2171 |
| TscAI | CASTG | 2 cut(s) | 1611, 2055 |
| TseFI | GTSAC | 5 cut(s) | 373, 748, 1075, 1207, 1496 |
| TseI | GCWGC | 7 cut(s) | 71, 74, 117, 513, 516, 556, 1715 |
| Tsp45I | GTSAC | 5 cut(s) | 373, 748, 1075, 1207, 1496 |
| TspDTI | ATGAA | 9 cut(s) | 187, 255, 369, 1331, 1367, 1510, 1612, 1632, 2216 |
| TspMI | CCCGGG | 1 cut(s) | 169 |
| TspRI | CASTG | 2 cut(s) | 1611, 2055 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1675 |
| VpaK11BI | GGWCC | 3 cut(s) | 248, 932, 1485 |
| VspI | ATTAAT | 1 cut(s) | 2009 |
| XapI | RAATTY | 4 cut(s) | 1293, 1517, 1619, 2091 |
| XceI | RCATGY | 4 cut(s) | 894, 1056, 1273, 1765 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1427 |
| XmaI | CCCGGG | 1 cut(s) | 169 |
| XmiI | GTMKAC | 1 cut(s) | 357 |
| XspI | CTAG | 7 cut(s) | 14, 800, 1017, 1205, 1979, 2151, 2222 |
| ZrmI | AGTACT | 1 cut(s) | 18 |
| Zsp2I | ATGCAT | 2 cut(s) | 892, 1058 |