Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0000066

Physical Location & Seq

Genomic Coordinates Reverse (-)

54240069 .. 54242512

Gene Structure 2444 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G030070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGCGTATGAGGGTTCATAGAGAAACTGCAATAGTGCCGCCGCGAGTGCATGGACACCAACTCTTTCGAGTACTTGTAGAAGTGATGATCATGATGAATATCACCATATATGAAAACACATCACAAGCCAAAGCAGATGCATCATCCCCTAAACTCCGATCTAAGGGATGCTCAGACACTTGTGGGCCTCTTAGCATCCCTTTTCCTTTCGGCACATCCCCGGGTTGTTTCTTTGACGATAACTTTTTCGTCTCCTGTAATACTACTACAAATAAAGCATTTCTCCGAGGAAGAAATAATGATTTAGCTATCCTCCACATATCACTGGAGGATCACGAACTGCGTGTGTCTAGGCCCGTGACGAAAGCCTGCTTTGATGAGCAGGGAAATCCTCTCAAAAGGTGGATTACAGGGGAAGATGGGAGGGTAGAAACTCCCACGGTGACACCCTCTGACTACTTTTATATCTCAAGTACACGAAACAAGTTCACTACTGTTGGTTGCAATGCAAGCGCGATAATCGTGACCAGCACCCCTAGAGATTTGGGCAACAACAATGCAGATTTGGGATCGACATACCTGGACTCTTGTGCATCTTTGTGTCTTCCAGGAGTCAAGAAGGTGAAGAATGGAACTTGTGACCCCCTTGGTGGATGTTGCCAGAAATCTATCACAATTAAAGGCCTGAAAAATTATGCGATTTCATATGGGAGTAGGAAGGAAGTAATTCGAAACAGAAATAGTTCAATATCAGCAATGGTACCACCTACATGTGCTTATGCTTTTGTTGTAGAAGCAGATACCTTTGAGTTTTCCTCTTTAGATCTTCAACAAGGCATACAAAACCGTGACGCTGTCCCTATGGTGCTCAATTGGGTTGTTGGGAATTACAATACATGTCAAGAGGCTCAGTCATCGTCGTCTACTGCCAGTAGTAACATAACTTATGCATGTCGCGCAAAGAATAGCGAATGTCACAACTCAACCAGCGGACCTGGCTATCTCTGCAAATGCCGCAAAGGTTACCAAGGGAACCCTTACATCCTTGATGGTTGCCAAGCAAAATGCATCAACAATCCTCGAAGTGTTTATTGCATTTGTCCAGATGGATACAAAGGAAATGGCAAGAAAAGCGGAACTGGTTGCAGCATCAATATCTACATCTTATTCTTGCATTTGGTAAGTATTTGCATAAGCATCATGGTGCTCCTTGGAGTAGGTTTTCGGATTTGCTGGGCTTCAAAGAAAAGAAAACTAGTCCAACTCAAAATGGAGTTCCTTGAACAAAATGGTGGAATTTTGTCTCAACAACTGCTCTCTGGTGAGAGAGCCCTTGAGATGATCAAAATTTTTAGTGCTGAGGAGCTGAAAAAGGCGACAAATAGTTACAACGAGGGTGTGGTTCTTGGCAAAGGAGGCAACGGAAGAGTGTACAAGGGACTTTTACGAGGTAAGAAAGTGGTTGCCATTAAGAAGTCTAAGGTTTGTGACAGGAGCCAAATCGAGCAGTTCATTAACGAGATGATTATTCTTTGCCGAGTCAATCACCCCAATGTTGTCAAGTTATTGGGTTGCTGTTTGGAGACTGAAGTCCCCATACTTGTTTACGAACTGTCATGGCAAATCCGCCTTAAAATTGCGAAGGAAGTTGCAGCAGCACTTGCATACTTGCACTCCGAGACTTCTATCCCTATCATACATAGAGATGTAAAGTCAGCCAATGTACTACTGGATGACAACTTCACGGCAAAGATTTCCGACTTTGGAGCTTCGAAGCTAACTCCTATCGGTCAAACTCAAATAACCACACTGGTGCAGGGCACGTACGGTTACTTTGATCCAGAATACTTCTGTAGTGGCATACTAACAGAAAAGAGTGACGTCTATGGTTATGGAGTCGTGCTGGCAGAGCTACTCACAGGCAAGGAGGCACTGTTTTGGAATAGTTCAGGGAGTAGAATAAACCTAGCATTCTACTTTGTTTCTTCAGTGAAAGAGGTTCGCTTGGTCGAAATTCTTGATGATCAAGTAGGTGTCGACCAAGAAATCATTGAGTTACTAACGGAAGTTGCTAGCCTTGCAGTAATGTGTTTAAGGGAGCGAGGAGATGAAAGACCTACTATGAAGGAAGTCCAAACAGAGCTAGAAGGACTAAGCCCACTTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005975 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006884 GO:0007154 GO:0007165 GO:0007166 GO:0008150 GO:0008152 GO:0008361 GO:0009311 GO:0009653 GO:0009719 GO:0009725 GO:0009751 GO:0009826 GO:0009987 GO:0009992 GO:0010033 GO:0014070 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019725 GO:0023052 GO:0030104 GO:0032502 GO:0032535 GO:0032989 GO:0036211 GO:0040007 GO:0042221 GO:0042493 GO:0042592 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0046677 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0055082 GO:0060560 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0090066 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

722

Amino Acids

79.57

Weight (kDa)

8.48

Isoelectric Point (pI)

33.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	57 - 118	8e-10	Wall-associated receptor kinase galacturonan-binding
Pkinase	PF00069	463 - 712	7.7e-36	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	468 - 715	7.7e-34	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000066)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca	FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica	MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica	Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis	pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis	RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata	RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora	Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii	Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa	Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha	Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana	Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1884
Acc65I	GGTACC	1 cut(s)	760
AccB1I	GGYRCC	1 cut(s)	760
AccI	GTMKAC	2 cut(s)	923, 2037
AccII	CGCG	3 cut(s)	43, 515, 957
AciI	CCGC	6 cut(s)	38, 41, 990, 1015, 1134, 1627
AclWI	GGATC	3 cut(s)	339, 577, 1832
AcsI	RAATTY	3 cut(s)	1296, 1347, 2013
AcuI	CTGAAG	2 cut(s)	1608, 1971
AcyI	GRCGYC	1 cut(s)	1881
AfaI	GTAC	6 cut(s)	72, 475, 762, 1433, 1725, 1826
AfiI	CCNNNNNNNGG	2 cut(s)	163, 650
AflIII	ACRYGT	2 cut(s)	770, 896
AgsI	TTSAA	4 cut(s)	747, 830, 1242, 1283
AhlI	ACTAGT	1 cut(s)	1255
AjnI	CCWGG	3 cut(s)	579, 607, 994
AleI	CACNNNNGTG	1 cut(s)	1811
AluBI	AGCT	6 cut(s)	308, 1366, 1769, 1777, 1912, 2143
AluI	AGCT	6 cut(s)	308, 1366, 1769, 1777, 1912, 2143
Alw21I	GWGCWC	2 cut(s)	870, 1209
Alw26I	GTCTC	4 cut(s)	256, 1308, 1577, 1673
AlwI	GGATC	3 cut(s)	339, 577, 1832
Ama87I	CYCGRG	1 cut(s)	220
AoxI	GGCC	3 cut(s)	185, 353, 682
ApeKI	GCWGC	3 cut(s)	1146, 1652, 1655
ApoI	RAATTY	3 cut(s)	1296, 1347, 2013
Asp700I	GAANNNNTTC	2 cut(s)	726, 742
Asp718I	GGTACC	1 cut(s)	760
AspLEI	GCGC	2 cut(s)	515, 959
AspS9I	GGNCC	3 cut(s)	185, 354, 992
AsuC2I	CCSGG	2 cut(s)	221, 222
AsuHPI	GGTGA	5 cut(s)	94, 454, 634, 1334, 1538
AsuII	TTCGAA	2 cut(s)	730, 1772
AsuNHI	GCTAGC	1 cut(s)	2072
AvaI	CYCGRG	1 cut(s)	220
AvaII	GGWCC	1 cut(s)	992
BaeGI	GKGCMC	1 cut(s)	1823
BanI	GGYRCC	1 cut(s)	760
BanII	GRGCYC	1 cut(s)	1333
BarI	GAAGNNNNNNTAC	2 cut(s)	1581, 1613
BbsI	GAAGAC	1 cut(s)	596
Bbv12I	GWGCWC	2 cut(s)	870, 1209
BbvCI	CCTCAGC	1 cut(s)	1359
BbvI	GCAGC	3 cut(s)	1158, 1664, 1667
BccI	CCATC	3 cut(s)	413, 1043, 1100
BceAI	ACGGC	1 cut(s)	1761
BciT130I	CCWGG	3 cut(s)	581, 609, 996
BciVI	GTATCC	1 cut(s)	1103
BclI	TGATCA	3 cut(s)	87, 1341, 2023
BcnI	CCSGG	2 cut(s)	221, 222
BcoDI	GTCTC	4 cut(s)	256, 1308, 1577, 1673
BcuI	ACTAGT	1 cut(s)	1255
BfaI	CTAG	6 cut(s)	351, 537, 1256, 1967, 2073, 2144
BfmI	CTRYAG	1 cut(s)	1852
BfuI	GTATCC	1 cut(s)	1103
BglII	AGATCT	1 cut(s)	823
BisI	GCNGC	6 cut(s)	38, 41, 1015, 1147, 1653, 1656
BlsI	GCNGC	6 cut(s)	39, 42, 1016, 1148, 1654, 1657
BmcAI	AGTACT	1 cut(s)	72
Bme1390I	CCNGG	5 cut(s)	221, 222, 581, 609, 996
Bme18I	GGWCC	1 cut(s)	992
BmeT110I	CYCGRG	1 cut(s)	220
BmgT120I	GGNCC	3 cut(s)	185, 354, 992
BmiI	GGNNCC	3 cut(s)	762, 1034, 1496
BmrFI	CCNGG	5 cut(s)	221, 222, 581, 609, 996
BmsI	GCATC	8 cut(s)	127, 149, 158, 204, 602, 1077, 1158, 1206
BmtI	GCTAGC	1 cut(s)	2076
BoxI	GACNNNNGTC	1 cut(s)	1589
BpiI	GAAGAC	1 cut(s)	596
BplI	GAGNNNNNCTC	2 cut(s)	800, 832
BpmI	CTGGAG	1 cut(s)	347
Bpu10I	CCTNAGC	1 cut(s)	1359
Bpu14I	TTCGAA	2 cut(s)	730, 1772
BpuEI	CTTGAG	2 cut(s)	454, 1355
BpuMI	CCSGG	2 cut(s)	221, 222
BsaAI	YACGTR	1 cut(s)	1824
BsaBI	GATNNNNATC	1 cut(s)	98
BsaHI	GRCGYC	1 cut(s)	1881
BsaJI	CCNNGG	7 cut(s)	219, 220, 286, 438, 646, 1027, 1210
BsaXI	ACNNNNNCTCC	4 cut(s)	1658, 1688, 1919, 1949
Bsc4I	CCNNNNNNNGG	2 cut(s)	163, 650
Bse1I	ACTGG	5 cut(s)	330, 930, 1144, 1734, 1815
Bse3DI	GCAATG	2 cut(s)	511, 762
Bse8I	GATNNNNATC	1 cut(s)	98
BseBI	CCWGG	3 cut(s)	581, 609, 996
BseDI	CCNNGG	7 cut(s)	219, 220, 286, 438, 646, 1027, 1210
BseGI	GGATG	7 cut(s)	143, 173, 195, 215, 659, 1041, 1738
BseJI	GATNNNNATC	1 cut(s)	98
BseLI	CCNNNNNNNGG	2 cut(s)	163, 650
BseMI	GCAATG	2 cut(s)	511, 762
BseMII	CTCAG	3 cut(s)	186, 923, 1350
BseNI	ACTGG	5 cut(s)	330, 930, 1144, 1734, 1815
BseRI	GAGGAG	2 cut(s)	1376, 2118
BseSI	GKGCMC	1 cut(s)	1823
BseXI	GCAGC	3 cut(s)	1158, 1664, 1667
BseYI	CCCAGC	1 cut(s)	1233
BsgI	GTGCAG	1 cut(s)	1835
Bsh1236I	CGCG	3 cut(s)	43, 515, 957
BshFI	GGCC	3 cut(s)	187, 355, 684
BshNI	GGYRCC	1 cut(s)	760
BsiHKAI	GWGCWC	2 cut(s)	870, 1209
BsiHKCI	CYCGRG	1 cut(s)	220
BsiSI	CCGG	1 cut(s)	221
BsiWI	CGTACG	1 cut(s)	1824
BslFI	GGGAC	3 cut(s)	842, 1452, 1577
BslI	CCNNNNNNNGG	2 cut(s)	163, 650
BsmAI	GTCTC	4 cut(s)	256, 1308, 1577, 1673
BsmBI	CGTCTC	1 cut(s)	256
BsmFI	GGGAC	3 cut(s)	842, 1452, 1577
BsmI	GAATGC	1 cut(s)	1970
BsnI	GGCC	3 cut(s)	187, 355, 684
BsoBI	CYCGRG	1 cut(s)	220
Bsp119I	TTCGAA	2 cut(s)	730, 1772
Bsp1286I	GDGCHC	4 cut(s)	870, 1209, 1333, 1823
Bsp1407I	TGTACA	1 cut(s)	1431
Bsp143I	GATC	8 cut(s)	87, 158, 331, 569, 823, 1341, 1837, 2023
BspACI	CCGC	6 cut(s)	38, 41, 990, 1015, 1134, 1627
BspANI	GGCC	3 cut(s)	187, 355, 684
BspCNI	CTCAG	3 cut(s)	185, 922, 1351
BspFNI	CGCG	3 cut(s)	43, 515, 957
BspHI	TCATGA	1 cut(s)	90
BspLI	GGNNCC	3 cut(s)	762, 1034, 1496
BspOI	GCTAGC	1 cut(s)	2076
BspPI	GGATC	3 cut(s)	339, 577, 1832
BspT104I	TTCGAA	2 cut(s)	730, 1772
BspT107I	GGYRCC	1 cut(s)	760
BsrDI	GCAATG	2 cut(s)	511, 762
BsrGI	TGTACA	1 cut(s)	1431
BsrI	ACTGG	5 cut(s)	330, 930, 1144, 1734, 1815
BssECI	CCNNGG	7 cut(s)	219, 220, 286, 438, 646, 1027, 1210
BssMI	GATC	8 cut(s)	87, 158, 331, 569, 823, 1341, 1837, 2023
BssNI	GRCGYC	1 cut(s)	1881
BssT1I	CCWWGG	3 cut(s)	646, 1027, 1210
Bst2UI	CCWGG	3 cut(s)	581, 609, 996
Bst4CI	ACNGT	6 cut(s)	442, 496, 848, 1614, 1829, 1935
Bst6I	CTCTTC	1 cut(s)	1420
BstACI	GRCGYC	1 cut(s)	1881
BstAPI	GCANNNNNTGC	1 cut(s)	1661
BstAUI	TGTACA	1 cut(s)	1431
BstBAI	YACGTR	1 cut(s)	1824
BstBI	TTCGAA	2 cut(s)	730, 1772
BstC8I	GCNNGC	4 cut(s)	370, 511, 1905, 2074
BstDEI	CTNAG	7 cut(s)	162, 172, 191, 909, 1359, 1479, 2153
BstDSI	CCRYGG	1 cut(s)	438
BstEII	GGTNACC	1 cut(s)	1022
BstF5I	GGATG	7 cut(s)	143, 173, 195, 215, 659, 1041, 1738
BstFNI	CGCG	3 cut(s)	43, 515, 957
BstHHI	GCGC	2 cut(s)	515, 959
BstKTI	GATC	8 cut(s)	90, 161, 334, 572, 826, 1344, 1840, 2026
BstMAI	GTCTC	4 cut(s)	256, 1308, 1577, 1673
BstMBI	GATC	8 cut(s)	87, 158, 331, 569, 823, 1341, 1837, 2023
BstNI	CCWGG	3 cut(s)	581, 609, 996
BstNSI	RCATGY	3 cut(s)	774, 900, 954
BstPAI	GACNNNNGTC	1 cut(s)	1589
BstPI	GGTNACC	1 cut(s)	1022
BstSCI	CCNGG	5 cut(s)	219, 220, 579, 607, 994
BstSFI	CTRYAG	1 cut(s)	1852
BstSLI	GKGCMC	1 cut(s)	1823
BstUI	CGCG	3 cut(s)	43, 515, 957
BstV1I	GCAGC	3 cut(s)	1158, 1664, 1667
BstV2I	GAAGAC	1 cut(s)	596
BstX2I	RGATCY	1 cut(s)	823
BstYI	RGATCY	1 cut(s)	823
BsuI	GTATCC	1 cut(s)	1103
BsuRI	GGCC	3 cut(s)	187, 355, 684
BtgI	CCRYGG	1 cut(s)	438
BtsCI	GGATG	7 cut(s)	143, 173, 195, 215, 659, 1041, 1738
BtsIMutI	CAGTG	4 cut(s)	323, 1808, 1931, 1995
Cac8I	GCNNGC	4 cut(s)	370, 511, 1905, 2074
CciI	TCATGA	1 cut(s)	90
CfoI	GCGC	2 cut(s)	515, 959
Cfr13I	GGNCC	3 cut(s)	185, 354, 992
Cfr9I	CCCGGG	1 cut(s)	220
CseI	GACGC	1 cut(s)	860
Csp6I	GTAC	6 cut(s)	71, 474, 761, 1432, 1724, 1825
CviAII	CATG	7 cut(s)	50, 91, 771, 897, 951, 1201, 1617
CviQI	GTAC	6 cut(s)	71, 474, 761, 1432, 1724, 1825
DdeI	CTNAG	7 cut(s)	162, 172, 191, 909, 1359, 1479, 2153
DpnI	GATC	8 cut(s)	89, 160, 333, 571, 825, 1343, 1839, 2025
DpnII	GATC	8 cut(s)	87, 158, 331, 569, 823, 1341, 1837, 2023
Eam1104I	CTCTTC	1 cut(s)	1420
EarI	CTCTTC	1 cut(s)	1420
EciI	GGCGGA	1 cut(s)	1616
Eco130I	CCWWGG	3 cut(s)	646, 1027, 1210
Eco147I	AGGCCT	1 cut(s)	684
Eco24I	GRGCYC	1 cut(s)	1333
Eco47I	GGWCC	1 cut(s)	992
Eco57I	CTGAAG	2 cut(s)	1608, 1971
Eco88I	CYCGRG	1 cut(s)	220
Eco91I	GGTNACC	1 cut(s)	1022
EcoO65I	GGTNACC	1 cut(s)	1022
EcoRII	CCWGG	3 cut(s)	579, 607, 994
EcoT14I	CCWWGG	3 cut(s)	646, 1027, 1210
EcoT22I	ATGCAT	3 cut(s)	142, 952, 1070
EcoT38I	GRGCYC	1 cut(s)	1333
ErhI	CCWWGG	3 cut(s)	646, 1027, 1210
Esp3I	CGTCTC	1 cut(s)	256
FaeI	CATG	7 cut(s)	53, 94, 774, 900, 954, 1204, 1620
FaqI	GGGAC	3 cut(s)	842, 1452, 1577
FatI	CATG	7 cut(s)	49, 90, 770, 896, 950, 1200, 1616
FauNDI	CATATG	1 cut(s)	706
FbaI	TGATCA	3 cut(s)	87, 1341, 2023
FblI	GTMKAC	2 cut(s)	923, 2037
Fnu4HI	GCNGC	6 cut(s)	38, 41, 1015, 1147, 1653, 1656
FokI	GGATG	7 cut(s)	130, 180, 182, 202, 666, 1028, 1745
FriOI	GRGCYC	1 cut(s)	1333
Fsp4HI	GCNGC	6 cut(s)	38, 41, 1015, 1147, 1653, 1656
FspBI	CTAG	6 cut(s)	351, 537, 1256, 1967, 2073, 2144
GlaI	GCGC	2 cut(s)	514, 958
GluI	GCNGC	6 cut(s)	38, 41, 1015, 1147, 1653, 1656
GsaI	CCCAGC	1 cut(s)	1237
GsuI	CTGGAG	1 cut(s)	347
HaeIII	GGCC	3 cut(s)	187, 355, 684
HapII	CCGG	1 cut(s)	221
HgaI	GACGC	1 cut(s)	860
HhaI	GCGC	2 cut(s)	515, 959
Hin1I	GRCGYC	1 cut(s)	1881
Hin1II	CATG	7 cut(s)	53, 94, 774, 900, 954, 1204, 1620
Hin6I	GCGC	2 cut(s)	513, 957
HinP1I	GCGC	2 cut(s)	513, 957
HincII	GTYRAC	1 cut(s)	2038
HindII	GTYRAC	1 cut(s)	2038
HinfI	GANTC	4 cut(s)	584, 612, 1539, 1896
HpaII	CCGG	1 cut(s)	221
HphI	GGTGA	5 cut(s)	94, 454, 634, 1334, 1538
Hpy166II	GTNNAC	6 cut(s)	476, 489, 924, 1432, 1606, 2038
Hpy188I	TCNGA	7 cut(s)	158, 175, 287, 454, 1227, 1678, 1759
Hpy188III	TCNNGA	8 cut(s)	91, 335, 523, 616, 902, 1103, 1841, 2018
Hpy8I	GTNNAC	6 cut(s)	476, 489, 924, 1432, 1606, 2038
Hpy99I	CGWCG	1 cut(s)	922
HpyAV	CCTTC	5 cut(s)	613, 712, 1636, 2119, 2141
HpyCH4III	ACNGT	6 cut(s)	442, 496, 848, 1614, 1829, 1935
HpyCH4IV	ACGT	2 cut(s)	1823, 1881
HpyF3I	CTNAG	7 cut(s)	162, 172, 191, 909, 1359, 1479, 2153
HpySE526I	ACGT	2 cut(s)	1823, 1881
Hsp92I	GRCGYC	1 cut(s)	1881
Hsp92II	CATG	7 cut(s)	53, 94, 774, 900, 954, 1204, 1620
HspAI	GCGC	2 cut(s)	513, 957
KpnI	GGTACC	1 cut(s)	764
Ksp22I	TGATCA	3 cut(s)	87, 1341, 2023
Kzo9I	GATC	8 cut(s)	87, 158, 331, 569, 823, 1341, 1837, 2023
LmnI	GCTCC	5 cut(s)	1212, 1363, 1494, 1766, 2098
Lsp1109I	GCAGC	3 cut(s)	1158, 1664, 1667
LweI	GCATC	8 cut(s)	127, 149, 158, 204, 602, 1077, 1158, 1206
MaeI	CTAG	6 cut(s)	351, 537, 1256, 1967, 2073, 2144
MaeII	ACGT	2 cut(s)	1823, 1881
MalI	GATC	8 cut(s)	89, 160, 333, 571, 825, 1343, 1839, 2025
MboI	GATC	8 cut(s)	87, 158, 331, 569, 823, 1341, 1837, 2023
MboII	GAAGA	7 cut(s)	303, 428, 596, 637, 818, 1437, 1977
MfeI	CAATTG	1 cut(s)	871
MflI	RGATCY	1 cut(s)	823
MhlI	GDGCHC	4 cut(s)	870, 1209, 1333, 1823
MlyI	GAGTC	4 cut(s)	578, 621, 1548, 1905
MmeI	TCCRAC	2 cut(s)	1285, 1782
Mph1103I	ATGCAT	3 cut(s)	142, 952, 1070
MroXI	GAANNNNTTC	2 cut(s)	726, 742
MseI	TTAA	7 cut(s)	678, 1470, 1515, 1632, 2093, 2163, 2167
MslI	CAYNNNNRTG	6 cut(s)	598, 769, 1202, 1551, 1704, 1811
MspA1I	CMGCKG	1 cut(s)	990
MspI	CCGG	1 cut(s)	221
MspR9I	CCNGG	5 cut(s)	221, 222, 581, 609, 996
MunI	CAATTG	1 cut(s)	871
Mva1269I	GAATGC	1 cut(s)	1970
MvaI	CCWGG	3 cut(s)	581, 609, 996
MvnI	CGCG	3 cut(s)	43, 515, 957
NciI	CCSGG	2 cut(s)	221, 222
NdeI	CATATG	1 cut(s)	706
NdeII	GATC	8 cut(s)	87, 158, 331, 569, 823, 1341, 1837, 2023
NheI	GCTAGC	1 cut(s)	2072
NlaIII	CATG	7 cut(s)	53, 94, 774, 900, 954, 1204, 1620
NlaIV	GGNNCC	3 cut(s)	762, 1034, 1496
NmeAIII	GCCGAG	1 cut(s)	1562
NmuCI	GTSAC	8 cut(s)	358, 442, 523, 638, 848, 974, 1487, 1877
NsiI	ATGCAT	3 cut(s)	142, 952, 1070
NspI	RCATGY	3 cut(s)	774, 900, 954
NspV	TTCGAA	2 cut(s)	730, 1772
OliI	CACNNNNGTG	1 cut(s)	1811
PacI	TTAATTAA	1 cut(s)	2167
PagI	TCATGA	1 cut(s)	90
PceI	AGGCCT	1 cut(s)	684
PciI	ACATGT	2 cut(s)	770, 896
PctI	GAATGC	1 cut(s)	1970
PdmI	GAANNNNTTC	2 cut(s)	726, 742
Pfl23II	CGTACG	1 cut(s)	1824
PflFI	GACNNNGTC	1 cut(s)	854
PfoI	TCCNGGA	1 cut(s)	607
PkrI	GCNGC	6 cut(s)	39, 42, 1016, 1148, 1654, 1657
PleI	GAGTC	4 cut(s)	578, 620, 1547, 1904
PpsI	GAGTC	4 cut(s)	578, 620, 1547, 1904
Ppu21I	YACGTR	1 cut(s)	1824
PscI	ACATGT	2 cut(s)	770, 896
PshAI	GACNNNNGTC	1 cut(s)	1589
Psp6I	CCWGG	3 cut(s)	579, 607, 994
PspEI	GGTNACC	1 cut(s)	1022
PspFI	CCCAGC	1 cut(s)	1233
PspGI	CCWGG	3 cut(s)	579, 607, 994
PspLI	CGTACG	1 cut(s)	1824
PspN4I	GGNNCC	3 cut(s)	762, 1034, 1496
PspPI	GGNCC	3 cut(s)	185, 354, 992
PsuI	RGATCY	1 cut(s)	823
PsyI	GACNNNGTC	1 cut(s)	854
RsaI	GTAC	6 cut(s)	72, 475, 762, 1433, 1725, 1826
RsaNI	GTAC	6 cut(s)	71, 474, 761, 1432, 1724, 1825
RseI	CAYNNNNRTG	6 cut(s)	598, 769, 1202, 1551, 1704, 1811
SalI	GTCGAC	1 cut(s)	2036
SaqAI	TTAA	7 cut(s)	678, 1470, 1515, 1632, 2093, 2163, 2167
SatI	GCNGC	6 cut(s)	38, 41, 1015, 1147, 1653, 1656
Sau3AI	GATC	8 cut(s)	87, 158, 331, 569, 823, 1341, 1837, 2023
Sau96I	GGNCC	3 cut(s)	185, 354, 992
ScaI	AGTACT	1 cut(s)	72
SchI	GAGTC	4 cut(s)	578, 621, 1548, 1905
ScrFI	CCNGG	5 cut(s)	221, 222, 581, 609, 996
SduI	GDGCHC	4 cut(s)	870, 1209, 1333, 1823
SfaNI	GCATC	8 cut(s)	127, 149, 158, 204, 602, 1077, 1158, 1206
SfcI	CTRYAG	1 cut(s)	1852
SfuI	TTCGAA	2 cut(s)	730, 1772
SinI	GGWCC	1 cut(s)	992
SmaI	CCCGGG	1 cut(s)	222
SmiMI	CAYNNNNRTG	6 cut(s)	598, 769, 1202, 1551, 1704, 1811
SmlI	CTYRAG	2 cut(s)	469, 1334
SmoI	CTYRAG	2 cut(s)	469, 1334
SpeI	ACTAGT	1 cut(s)	1255
SseBI	AGGCCT	1 cut(s)	684
SsiI	CCGC	6 cut(s)	38, 41, 990, 1015, 1134, 1627
SspMI	CTAG	6 cut(s)	351, 537, 1256, 1967, 2073, 2144
StuI	AGGCCT	1 cut(s)	684
StyD4I	CCNGG	5 cut(s)	219, 220, 579, 607, 994
StyI	CCWWGG	3 cut(s)	646, 1027, 1210
TaaI	ACNGT	6 cut(s)	442, 496, 848, 1614, 1829, 1935
TaiI	ACGT	2 cut(s)	1826, 1884
TaqI	TCGA	8 cut(s)	67, 572, 730, 1081, 1503, 1772, 2010, 2037
TaqII	GACCGA	1 cut(s)	1778
TatI	WGTACW	4 cut(s)	70, 473, 1431, 1723
TauI	GCSGC	3 cut(s)	40, 43, 1017
Tru1I	TTAA	7 cut(s)	678, 1470, 1515, 1632, 2093, 2163, 2167
Tru9I	TTAA	7 cut(s)	678, 1470, 1515, 1632, 2093, 2163, 2167
TscAI	CASTG	4 cut(s)	330, 1815, 1938, 1995
TseFI	GTSAC	8 cut(s)	358, 442, 523, 638, 848, 974, 1487, 1877
TseI	GCWGC	3 cut(s)	1146, 1652, 1655
Tsp45I	GTSAC	8 cut(s)	358, 442, 523, 638, 848, 974, 1487, 1877
TspDTI	ATGAA	7 cut(s)	5, 110, 126, 693, 1501, 2124, 2138
TspGWI	ACGGA	2 cut(s)	1437, 2078
TspMI	CCCGGG	1 cut(s)	220
TspRI	CASTG	4 cut(s)	330, 1815, 1938, 1995
Tth111I	GACNNNGTC	1 cut(s)	854
VpaK11BI	GGWCC	1 cut(s)	992
XapI	RAATTY	3 cut(s)	1296, 1347, 2013
XceI	RCATGY	3 cut(s)	774, 900, 954
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1726
XmaI	CCCGGG	1 cut(s)	220
XmiI	GTMKAC	2 cut(s)	923, 2037
XmnI	GAANNNNTTC	2 cut(s)	726, 742
XspI	CTAG	6 cut(s)	351, 537, 1256, 1967, 2073, 2144
ZraI	GACGTC	1 cut(s)	1882
ZrmI	AGTACT	1 cut(s)	72
Zsp2I	ATGCAT	3 cut(s)	142, 952, 1070

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.