RLG00000032261

Wall-associated receptor kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
12710254 .. 12717478
7225 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000032261

Sequence Viewer

Length: 4509 bp
ATGGCGGCCTTGCAGGGTATCTTGCTCATCATCCAACTCTCATTCGTAATCATCGGAGTACTGATTGTATCAACAACAGCAGCAGAACCTCAAGCGCTGCCTAACTGCCCTGACAAATGTGGTAATCTTACAATTCCTTACCCATTTGGCATGGCCGAAGGTTGTTACCGAGGAAATGCCTTCTTTGTCAATTGTAGCCAAGCAACCGATCCCCCAGTAGCATATTTGACCAAAAATGGCACTGTCATCATTACCAACATATCCCTTGCTGCGGGAGAGTTGCAAATATCAAATTTTATAGCTCGAGATTGCTATAGTTCCTCAGCTCTGAGAACCAGAAGGAACAGCCCTGTGCTACAGCTGCCTTCTCCTAACACCATCTCTGATACCAACAACAAATTCATTGCCGTTGGTTGTGACACTTACGCAATTTTCAAAGGATTCCGGGGCACAGAACAGTCCATAACTGGGTGCATGTCAGTATGTAACAGCCTAGGAAGCGTTGATCAGAATTCTTGCTCCGGGGTTGGGTGTTGCCAAACAAACATTCCTAGCGGACTGCATAACCGTACTGTGACACTGGATAGCTATACCAATCATTCAGATATATGGGACTTTAACCCTTGCAGCTTTGCATTCATTGTTGAAGAGACACAGTTCAAGTTCTCCGGGACCACAAGTTTTCAACAACTGAACAGCACTACATGGCTTCCAATGGTTCTTAATTGGGCAATTGGGGATGAGCCAGACCCATGTGATGTAGCTCAAAAGAGGCAGGATTTCGTATGCAAGCAAAATAGCAAGTGTGTGAATCCCACAAGTAGGAATGGTTACATTTGCCAGTGCTTGGAAGGTTATGAAGGGAACCCATACCACCCAGATGGGTGCCAAGATATTGATGAGTGCAAGGATCCAAATCTCTGCAACCACGGAGAGAGCAAAAATTTGGCAGGAAGTTACACTTGTTTGTGCTCAAAAGGATACAAGATCAACAGCATGAATGACAAGAGTTGCATCAAAGAGAATCCCAAAAATAACTCAAAGATGACTCTCCTGCTTATTATTTCATTGAGTGTAAGTATAGGCTTATTGGTTTTATTTGTGGGGATTTCGTGGATATGTTGCGGGATAAAGAGAAGACAATACACAAAACTCAAAGAAAAGTACTTCAAAGAGAATGGTGGCTTATTGTTACTACAACAACTTGCTAGTCATGGAGGCACTGTGGAGACAACAAAAATCTTTTCCACAGAAGAACTTGAGAAGGCAACAAACAATTACCACGAGAGTAGAATCCTTGGAGAAGGAGGCTATGGAACAGTTTACAAAGGAATACTACCAGATGACAAAGTGGTGGCCATAAAAAAGTCAAAAGGTGGTGCCCCAACCCAAAGTGATCAGTTTGTTAACGAGGTGATTGTTCTTTCTCAAATAAACCACAGAAATGTGGTGAAGCTACTAGGTTGTTGTTTAGAGACAGAAGTGCCTTTACTAGTATATGAGTTCATCACCCATGGAACTCTCTATGAGCATATTCATAAGAAAAGATCATCACTGTCATTTGAATTACGAATGAAGATAGCAGTTGAAACGGCAGAAGCACTAGCATACTTACACTCCTCAACTTCAAATCCAATCATACATCGAGATGTGAAAGCAGAAAATATACTCTTAGATGATGCTTATACAGCAAAAGTATCAGACTTTGGAGCTTCAAGATTGATTCCATCAGGTCAAACTGAAATACAAACTTTAGTGCTAGGGACATTCGGTTACCTGGACCCTGAATATCTGCAATCGAACCAACTAACAGAAAAGAGTGACGTCTACAGCTTTGGTGTTGTCCTAGTGGAGCTACTAACAAGCAAAGTGGCACTTTCTAAGGACAGATGCTTAACAAGCATCTTTCTTTCTTCCATGGATGAAGATTGCTTAAATAAAATTCTTGATGATGACATTGCGAACGAGGGAAACATTGAGACAGTAAAGAATGTGGCCAGTCTTGCAAAAAGATGCTTGAGGGTAAAAGGGGAGGAAAGGCCTACCATGAAAGAAGTAGCAATGGAGCTAGAGGGAATGAGGATTACAGCAAAGCACCCATGGGGAACTAATGTTGGAGACGCCGAGACACGGAGAGGAGGAGAGGAGAGGACGACGGTTGTGGACTTGTGGTCTCCCGCTTGTTTGTTGGAGATTTCAGAAGCAGTCTCTGTTCGTTCCGGGAAGATTGTGCGGAATTGGGACGACCACACGAACAACTTCCGCGATATCGAAATTGCAGCAAAATTGAGCAACAATCAGATCATGGCGTTGCGACTCTCATTTGTAGCAGTTCTACTCCTGTTATTGGTGGCTAGTACTACTACAACAACAGCAGCTGCTGCTCAAGCCCTGCCTGGTTGCTCAGACAACAATACCACCCAACCACCAACAGCGTATTTAAGAGTCAGCAATATCATTGTTACTATCATTTCCCTTGATGAAGGTGAGTTGCAAATATCCAACAACGCGGCTGAAGCTTGCTATAACGAGCAGGGCATTGTGAGATCCAGCAAGGATTATTCGCTCGACCTGCCCTTTCCTTATACGATATCCGATACCAAAAACAAGTTTTACACTGTTGGTTGTGACACTTATTCAATTTTACAAGGCTTCCTAGGGGAAGATGAGTTCGATACGGGGTGCATTTCCATATGCAACAGGCTTGACATTGTTGATCAATATTCTTGCTCTGGCGCTGGGTGCTGCCAGACTAACATCCCCAGAGGGTTGAAAAATACGACGGCGACGTTGGATACTATCAACGGTCATAAGGATATATGGGAATTTAACCCCTGCAGCTACGCCTTCATTGCAGAGCAAGGACAGTTCAATTTCTCTGCTGCAAGTTTAAAGAAACAGGACAAAAACTACAGGCTTCCAGCGGTTCTTAATTGGGCAATTGGGAATGACACAGACTCCTGTGATGAAGCTCAAAAGAGGAAGGATTTCGCTTGCAAGGTTAATAGCAGGTGCGCCAAAGGGCCTATCAACGGGTCTGTAGGTTACTTGTGCCAATGCTTACCTGGTTATGAAGGAAACCCCTACCATCCAGATGGTTGCCAAGATATTGATGAGTGCACTGCTTTAAACCCCTGCAATGGACTGAATGAAGAATGTGTAAATTCTCGAGGGAATTACTCCTGTTCATGTCGCAGTGGCTACAAAAACAATGGCCCGAATGGAAAGTGCATAAAAGACAATTCCAGCGACCGTCTCCTGCTCATAATTCTTTCATTGGGAATTTCTGTGGGCCTATTTGTGATTTTATTAGTTGGAAGTTTATGGATGTATTGGGGACTGAAGAAAAGGAAGTTCATAAAACTCAAAGAGAAGTACTTTACAGAAAATGGTGGTTTATTGTTAAAACATAAACTCACTAGTCAAGGAGGATCTGTTGAGACAACTAAACTATTTACTGCAGAAGAACTTGAGAAGGCCACAAACAATTACCATGAAAGTAGAATCCTTGGTGAAGGAGGGTATGGACCAGTTTACAGAGGCATATTACTAGATAACCAAGTGGTTGCAATAAAAAAGTCCAAAGTTGGTGCCCCGACTCAAACTGATCAGTTTGTTAATGAGGTGATTGTTCTTTCTCAAGTCAACCATAGAAATGTAGTAAGGCTATTAGGTTGTTGTTTAGAGACAGAAGTCCCTTTACTAGTATACGAGTTCATCACCCAGGGCACTCTCTTTGAGCACATTCACAAGCAAAAGGGTAAAGGGTCATCACTTTCATGGGAACTCCGATTGAAGATAGCATCAGAAACTGCAGGAGCACTAGCATACTTGCACTCCTCCACTTCCACACCGATCATGCACCGAGATGTGAAAACAATGAATATACTATTAGATGACAATTACACAGCCAAAGTGTCAGATTTTGGAGCTTCACGTTTCATTCCTATTGATCAAACTCAACTAGCAACAATGGTGCAAGGAACATTTGGATACTTGGACCCCGAATACTTCCATTCAAATCAACTAACAGAAAAGAGTGACGTCTATAGCTTTGGAGTGGTTCTAGCAGAGCTACTCACAAGTAAAGTGGCATTTTCTTTTGCAAGGCCTGAGGCAGAGAGACGCCTTGCACACTTTTTTGTTTGTTCGATGGAAGATGGTCACTTGAACCAAATTCTATATGATGACATTATTAATGAAGGAGATATTGACCAGAGAGTAATAGAAAATGTGGCCCATCTTGCAAGAAGATGTTTGAGGGTAAAAGGGGAGGAAAGGCCTACCATGAGAGAAGTAGCCATGGAGCTGGAAGGAATGATTGTGACAAAGCATCCATGGGGTTCTGCAGATCATTACTTCCCAGAAGAGACTAAGCACTTGCTCGGATCACCTAATACTTCCAAGGATTATGTTGTGAATGTTGATGGTGATGGTGGTCCTGGTACAACCAGTGGGTGTGACAGCATGCAGATCGAAATGTTAATGTCATATGCTGATGGGCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1503

Amino Acids

165.6

Weight (kDa)

5.61

Isoelectric Point (pI)

33.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 36 - 97 7.4e-10 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 298 - 338 1.7e-06 Calcium-binding EGF domain
Pkinase PF00069 427 - 686 5e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 430 - 690 3.6e-50 Protein tyrosine and serine/threonine kinase
EGF_CA PF07645 1036 - 1077 1.7e-07 Calcium-binding EGF domain
Pkinase PF00069 1164 - 1433 9.4e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 1167 - 1437 1.2e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3000
AatII GACGTC 2 cut(s) 1827, 4047
Acc36I ACCTGC 2 cut(s) 2580, 3000
AccB1I GGYRCC 3 cut(s) 885, 1379, 3590
AccB7I CCANNNNNTGG 1 cut(s) 847
AccI GTMKAC 2 cut(s) 1827, 3708
AccII CGCG 2 cut(s) 2265, 2510
AciI CCGC 9 cut(s) 5, 272, 555, 1125, 2178, 2233, 2263, 2510, 2924
AclWI GGATC 6 cut(s) 203, 905, 918, 2541, 3439, 4396
AcoI YGGCCR 3 cut(s) 153, 1356, 1995
AcsI RAATTY 9 cut(s) 292, 398, 511, 943, 1941, 2825, 3163, 3282, 4176
AcuI CTGAAG 2 cut(s) 2535, 3362
AcyI GRCGYC 4 cut(s) 1824, 2121, 4044, 4126
AfaI GTAC 6 cut(s) 60, 571, 1166, 2359, 3377, 4447
AfeI AGCGCT 1 cut(s) 96
AfiI CCNNNNNNNGG 9 cut(s) 271, 468, 528, 822, 847, 2130, 2347, 3032, 3140
AhdI GACNNNNNGTC 1 cut(s) 2170
AhlI ACTAGT 3 cut(s) 1492, 3419, 3703
AjnI CCWGG 5 cut(s) 1776, 2395, 3064, 3723, 4441
AjuI GAANNNNNNNTTGG 4 cut(s) 383, 415, 531, 563
AloI GAACNNNNNNTCC 2 cut(s) 2654, 2686
Alw21I GWGCWC 4 cut(s) 974, 3122, 3744, 3823
Alw44I GTGCAC 1 cut(s) 3118
AlwI GGATC 6 cut(s) 203, 905, 918, 2541, 3439, 4396
AlwNI CAGNNNCTG 4 cut(s) 2210, 2378, 2381, 3812
Ama87I CYCGRG 2 cut(s) 303, 3168
Aor51HI AGCGCT 1 cut(s) 96
ApaLI GTGCAC 1 cut(s) 3118
ApoI RAATTY 9 cut(s) 292, 398, 511, 943, 1941, 2825, 3163, 3282, 4176
AseI ATTAAT 1 cut(s) 4197
Asp700I GAANNNNTTC 2 cut(s) 2258, 2987
AspA2I CCTAGG 2 cut(s) 493, 2656
AspLEI GCGC 3 cut(s) 97, 2738, 3017
AspS9I GGNCC 9 cut(s) 672, 1780, 3023, 3215, 3292, 3527, 4000, 4237, 4439
AsuC2I CCSGG 4 cut(s) 446, 523, 670, 2221
AsuHPI GGTGA 9 cut(s) 1426, 1462, 1501, 2498, 3524, 3637, 3712, 4383, 4442
AvaI CYCGRG 2 cut(s) 303, 3168
AvaII GGWCC 5 cut(s) 672, 1780, 3527, 4000, 4439
AvrII CCTAGG 2 cut(s) 493, 2656
AxyI CCTNAGG 1 cut(s) 4113
BaeGI GKGCMC 5 cut(s) 452, 1384, 3122, 3595, 3731
BalI TGGCCA 2 cut(s) 1358, 1997
BamHI GGATCC 1 cut(s) 910
BanI GGYRCC 3 cut(s) 885, 1379, 3590
BarI GAAGNNNNNNTAC 4 cut(s) 1473, 1505, 3684, 3716
BauI CACGAG 1 cut(s) 1283
BbsI GAAGAC 1 cut(s) 1144
Bbv12I GWGCWC 4 cut(s) 974, 3122, 3744, 3823
BbvCI CCTCAGC 1 cut(s) 322
BceAI ACGGC 3 cut(s) 392, 1608, 2799
BcgI CGANNNNNNTGC 2 cut(s) 4456, 4490
BciT130I CCWGG 5 cut(s) 1778, 2397, 3066, 3725, 4443
BciVI GTATCC 3 cut(s) 974, 2788, 3986
BclI TGATCA 5 cut(s) 505, 1396, 2716, 3607, 3952
BcnI CCSGG 4 cut(s) 446, 523, 670, 2221
BcuI ACTAGT 3 cut(s) 1492, 3419, 3703
BfoI RGCGCY 2 cut(s) 98, 2739
BfuAI ACCTGC 2 cut(s) 2580, 3000
BfuI GTATCC 3 cut(s) 974, 2788, 3986
BlnI CCTAGG 2 cut(s) 493, 2656
BmcAI AGTACT 4 cut(s) 60, 1166, 2359, 3377
Bme1390I CCNGG 9 cut(s) 446, 523, 670, 1778, 2221, 2397, 3066, 3725, 4443
Bme18I GGWCC 5 cut(s) 672, 1780, 3527, 4000, 4439
BmeRI GACNNNNNGTC 1 cut(s) 2170
BmeT110I CYCGRG 2 cut(s) 303, 3168
BmgT120I GGNCC 9 cut(s) 672, 1780, 3023, 3215, 3292, 3527, 4000, 4237, 4439
BmiI GGNNCC 8 cut(s) 673, 866, 887, 912, 1381, 1782, 3592, 4002
BmrFI CCNGG 9 cut(s) 446, 523, 670, 1778, 2221, 2397, 3066, 3725, 4443
BmrI ACTGGG 2 cut(s) 209, 477
BmsI GCATC 7 cut(s) 1023, 1669, 1880, 1911, 2003, 3812, 4342
BmuI ACTGGG 2 cut(s) 209, 477
BoxI GACNNNNGTC 1 cut(s) 3692
BpiI GAAGAC 1 cut(s) 1144
Bpu10I CCTNAGC 1 cut(s) 322
BpuEI CTTGAG 6 cut(s) 75, 1280, 2038, 2370, 3491, 3624
BpuMI CCSGG 4 cut(s) 446, 523, 670, 2221
BsaBI GATNNNNATC 1 cut(s) 915
BsaHI GRCGYC 4 cut(s) 1824, 2121, 4044, 4126
BsaI GGTCTC 1 cut(s) 2178
Bsc4I CCNNNNNNNGG 9 cut(s) 271, 468, 528, 822, 847, 2130, 2347, 3032, 3140
Bse1I ACTGG 7 cut(s) 215, 472, 585, 841, 1998, 3530, 4452
Bse21I CCTNAGG 1 cut(s) 4113
Bse3DI GCAATG 5 cut(s) 402, 1956, 2067, 2850, 3145
Bse8I GATNNNNATC 1 cut(s) 915
BseBI CCWGG 5 cut(s) 1778, 2397, 3066, 3725, 4443
BseGI GGATG 7 cut(s) 30, 745, 1927, 2757, 3088, 3333, 4333
BseJI GATNNNNATC 1 cut(s) 915
BseLI CCNNNNNNNGG 9 cut(s) 271, 468, 528, 822, 847, 2130, 2347, 3032, 3140
BseMI GCAATG 5 cut(s) 402, 1956, 2067, 2850, 3145
BseMII CTCAG 4 cut(s) 320, 336, 2418, 4104
BseNI ACTGG 7 cut(s) 215, 472, 585, 841, 1998, 3530, 4452
BseRI GAGGAG 5 cut(s) 1609, 2151, 2154, 2159, 3829
BseSI GKGCMC 5 cut(s) 452, 1384, 3122, 3595, 3731
BseYI CCCAGC 1 cut(s) 2738
Bsh1236I CGCG 2 cut(s) 2265, 2510
Bsh1285I CGRYCG 1 cut(s) 3253
BshNI GGYRCC 3 cut(s) 885, 1379, 3590
BsiEI CGRYCG 1 cut(s) 3253
BsiHKAI GWGCWC 4 cut(s) 974, 3122, 3744, 3823
BsiHKCI CYCGRG 2 cut(s) 303, 3168
BsiSI CCGG 4 cut(s) 445, 522, 669, 2220
BslFI GGGAC 6 cut(s) 626, 685, 1777, 2255, 3351, 3680
BslI CCNNNNNNNGG 9 cut(s) 271, 468, 528, 822, 847, 2130, 2347, 3032, 3140
BsmBI CGTCTC 3 cut(s) 2112, 3260, 4117
BsmFI GGGAC 6 cut(s) 626, 685, 1777, 2255, 3351, 3680
BsmI GAATGC 1 cut(s) 635
Bso31I GGTCTC 1 cut(s) 2178
BsoBI CYCGRG 2 cut(s) 303, 3168
Bsp1286I GDGCHC 8 cut(s) 452, 974, 1384, 3122, 3595, 3731, 3744, 3823
Bsp19I CCATGG 5 cut(s) 1513, 1917, 2099, 4302, 4337
BspACI CCGC 9 cut(s) 5, 272, 555, 1125, 2178, 2233, 2263, 2510, 2924
BspCNI CTCAG 4 cut(s) 321, 335, 2417, 4105
BspFNI CGCG 2 cut(s) 2265, 2510
BspLI GGNNCC 8 cut(s) 673, 866, 887, 912, 1381, 1782, 3592, 4002
BspMAI CTGCAG 4 cut(s) 2840, 3463, 3817, 4351
BspMI ACCTGC 2 cut(s) 2580, 3000
BspPI GGATC 6 cut(s) 203, 905, 918, 2541, 3439, 4396
BspT107I GGYRCC 3 cut(s) 885, 1379, 3590
BspTNI GGTCTC 1 cut(s) 2178
BsrDI GCAATG 5 cut(s) 402, 1956, 2067, 2850, 3145
BsrI ACTGG 7 cut(s) 215, 472, 585, 841, 1998, 3530, 4452
BssNAI GTATAC 1 cut(s) 3709
BssNI GRCGYC 4 cut(s) 1824, 2121, 4044, 4126
BssSI CACGAG 1 cut(s) 1283
Bst1107I GTATAC 1 cut(s) 3709
Bst2BI CACGAG 1 cut(s) 1283
Bst2UI CCWGG 5 cut(s) 1778, 2397, 3066, 3725, 4443
Bst6I CTCTTC 2 cut(s) 642, 4362
BstACI GRCGYC 4 cut(s) 1824, 2121, 4044, 4126
BstAPI GCANNNNNTGC 1 cut(s) 2381
BstC8I GCNNGC 4 cut(s) 791, 2521, 2995, 4469
BstDEI CTNAG 7 cut(s) 322, 329, 1672, 1881, 2404, 4113, 4374
BstDSI CCRYGG 6 cut(s) 928, 1513, 1917, 2099, 4302, 4337
BstEII GGTNACC 1 cut(s) 1772
BstF5I GGATG 7 cut(s) 30, 745, 1927, 2757, 3088, 3333, 4333
BstFNI CGCG 2 cut(s) 2265, 2510
BstH2I RGCGCY 2 cut(s) 98, 2739
BstHHI GCGC 3 cut(s) 97, 2738, 3017
BstMCI CGRYCG 1 cut(s) 3253
BstNI CCWGG 5 cut(s) 1778, 2397, 3066, 3725, 4443
BstNSI RCATGY 2 cut(s) 478, 4471
BstPAI GACNNNNGTC 1 cut(s) 3692
BstPI GGTNACC 1 cut(s) 1772
BstSCI CCNGG 9 cut(s) 444, 521, 668, 1776, 2219, 2395, 3064, 3723, 4441
BstSLI GKGCMC 5 cut(s) 452, 1384, 3122, 3595, 3731
BstUI CGCG 2 cut(s) 2265, 2510
BstV2I GAAGAC 1 cut(s) 1144
BstX2I RGATCY 3 cut(s) 910, 2546, 3431
BstXI CCANNNNNNTGG 3 cut(s) 881, 3095, 4309
BstYI RGATCY 3 cut(s) 910, 2546, 3431
BstZ17I GTATAC 1 cut(s) 3709
Bsu36I CCTNAGG 1 cut(s) 4113
BsuI GTATCC 3 cut(s) 974, 2788, 3986
BtgI CCRYGG 6 cut(s) 928, 1513, 1917, 2099, 4302, 4337
BtsCI GGATG 7 cut(s) 30, 745, 1927, 2757, 3088, 3333, 4333
BtsI GCAGTG 2 cut(s) 3120, 3202
BtsIMutI CAGTG 9 cut(s) 240, 578, 848, 1221, 1553, 2616, 3120, 3202, 4459
BveI ACCTGC 2 cut(s) 2580, 3000
Cac8I GCNNGC 4 cut(s) 791, 2521, 2995, 4469
CaiI CAGNNNCTG 4 cut(s) 2210, 2378, 2381, 3812
CfoI GCGC 3 cut(s) 97, 2738, 3017
Cfr13I GGNCC 9 cut(s) 672, 1780, 3023, 3215, 3292, 3527, 4000, 4237, 4439
CseI GACGC 2 cut(s) 2129, 4134
CsiI ACCWGGT 1 cut(s) 3064
Csp6I GTAC 6 cut(s) 59, 570, 1165, 2358, 3376, 4446
CspCI CAANNNNNGTGG 4 cut(s) 1851, 1886, 4071, 4106
CviQI GTAC 6 cut(s) 59, 570, 1165, 2358, 3376, 4446
DdeI CTNAG 7 cut(s) 322, 329, 1672, 1881, 2404, 4113, 4374
DraI TTTAAA 2 cut(s) 2892, 3129
DriI GACNNNNNGTC 1 cut(s) 2170
EaeI YGGCCR 3 cut(s) 153, 1356, 1995
Eam1104I CTCTTC 2 cut(s) 642, 4362
Eam1105I GACNNNNNGTC 1 cut(s) 2170
EarI CTCTTC 2 cut(s) 642, 4362
Eco147I AGGCCT 3 cut(s) 2041, 4111, 4282
Eco31I GGTCTC 1 cut(s) 2178
Eco32I GATATC 2 cut(s) 2269, 2592
Eco47I GGWCC 5 cut(s) 672, 1780, 3527, 4000, 4439
Eco47III AGCGCT 1 cut(s) 96
Eco57I CTGAAG 2 cut(s) 2535, 3362
Eco81I CCTNAGG 1 cut(s) 4113
Eco88I CYCGRG 2 cut(s) 303, 3168
Eco91I GGTNACC 1 cut(s) 1772
EcoO109I RGGNCCY 1 cut(s) 3023
EcoO65I GGTNACC 1 cut(s) 1772
EcoRI GAATTC 1 cut(s) 511
EcoRII CCWGG 5 cut(s) 1776, 2395, 3064, 3723, 4441
EcoRV GATATC 2 cut(s) 2269, 2592
Esp3I CGTCTC 3 cut(s) 2112, 3260, 4117
FalI AAGNNNNNCTT 4 cut(s) 946, 978, 1860, 1892
FaqI GGGAC 6 cut(s) 626, 685, 1777, 2255, 3351, 3680
FauI CCCGC 3 cut(s) 265, 1118, 2185
FauNDI CATATG 2 cut(s) 2693, 4492
FbaI TGATCA 5 cut(s) 505, 1396, 2716, 3607, 3952
FblI GTMKAC 2 cut(s) 1827, 3708
FokI GGATG 7 cut(s) 17, 752, 1934, 2744, 3075, 3340, 4320
GlaI GCGC 3 cut(s) 96, 2737, 3016
GsaI CCCAGC 1 cut(s) 2742
HaeII RGCGCY 2 cut(s) 98, 2739
HapII CCGG 4 cut(s) 445, 522, 669, 2220
HgaI GACGC 2 cut(s) 2129, 4134
HhaI GCGC 3 cut(s) 97, 2738, 3017
Hin1I GRCGYC 4 cut(s) 1824, 2121, 4044, 4126
Hin6I GCGC 3 cut(s) 95, 2736, 3015
HinP1I GCGC 3 cut(s) 95, 2736, 3015
HincII GTYRAC 2 cut(s) 1408, 3646
HindII GTYRAC 2 cut(s) 1408, 3646
HindIII AAGCTT 1 cut(s) 2517
HpaI GTTAAC 1 cut(s) 1408
HpaII CCGG 4 cut(s) 445, 522, 669, 2220
HphI GGTGA 9 cut(s) 1426, 1462, 1501, 2498, 3524, 3637, 3712, 4383, 4442
Hpy166II GTNNAC 8 cut(s) 1324, 1408, 1828, 2164, 3120, 3535, 3646, 3709
Hpy188III TCNNGA 6 cut(s) 305, 1646, 1716, 1946, 3092, 3168
Hpy8I GTNNAC 8 cut(s) 1324, 1408, 1828, 2164, 3120, 3535, 3646, 3709
Hpy99I CGWCG 3 cut(s) 2158, 2785, 2791
HpyCH4IV ACGT 4 cut(s) 1824, 2789, 3937, 4044
HpyF3I CTNAG 7 cut(s) 322, 329, 1672, 1881, 2404, 4113, 4374
HpySE526I ACGT 4 cut(s) 1824, 2789, 3937, 4044
Hsp92I GRCGYC 4 cut(s) 1824, 2121, 4044, 4126
HspAI GCGC 3 cut(s) 95, 2736, 3015
Ksp22I TGATCA 5 cut(s) 505, 1396, 2716, 3607, 3952
KspAI GTTAAC 1 cut(s) 1408
LmnI GCTCC 7 cut(s) 524, 1709, 1852, 2065, 3818, 3929, 4306
LweI GCATC 7 cut(s) 1023, 1669, 1880, 1911, 2003, 3812, 4342
MabI ACCWGGT 1 cut(s) 3064
MaeII ACGT 4 cut(s) 1824, 2789, 3937, 4044
MfeI CAATTG 3 cut(s) 190, 732, 2940
MflI RGATCY 3 cut(s) 910, 2546, 3431
MhlI GDGCHC 8 cut(s) 452, 974, 1384, 3122, 3595, 3731, 3744, 3823
MlsI TGGCCA 2 cut(s) 1358, 1997
MluNI TGGCCA 2 cut(s) 1358, 1997
MlyI GAGTC 5 cut(s) 1042, 2310, 2454, 2951, 3592
MmeI TCCRAC 6 cut(s) 58, 2095, 2169, 2526, 2772, 3295
Mox20I TGGCCA 2 cut(s) 1358, 1997
MroXI GAANNNNTTC 2 cut(s) 2258, 2987
MscI TGGCCA 2 cut(s) 1358, 1997
MslI CAYNNNNRTG 7 cut(s) 879, 1443, 1647, 3093, 3654, 3778, 3867
Msp20I TGGCCA 2 cut(s) 1358, 1997
MspA1I CMGCKG 3 cut(s) 361, 2378, 2924
MspI CCGG 4 cut(s) 445, 522, 669, 2220
MspR9I CCNGG 9 cut(s) 446, 523, 670, 1778, 2221, 2397, 3066, 3725, 4443
MunI CAATTG 3 cut(s) 190, 732, 2940
Mva1269I GAATGC 1 cut(s) 635
MvaI CCWGG 5 cut(s) 1778, 2397, 3066, 3725, 4443
MvnI CGCG 2 cut(s) 2265, 2510
NciI CCSGG 4 cut(s) 446, 523, 670, 2221
NcoI CCATGG 5 cut(s) 1513, 1917, 2099, 4302, 4337
NdeI CATATG 2 cut(s) 2693, 4492
NlaIV GGNNCC 8 cut(s) 673, 866, 887, 912, 1381, 1782, 3592, 4002
NmeAIII GCCGAG 1 cut(s) 2149
NmuCI GTSAC 8 cut(s) 416, 574, 1820, 2627, 4040, 4163, 4324, 4460
NspI RCATGY 2 cut(s) 478, 4471
PaeI GCATGC 1 cut(s) 4471
PaeR7I CTCGAG 2 cut(s) 303, 3168
PaqCI CACCTGC 1 cut(s) 3000
PasI CCCWGGG 1 cut(s) 3724
PceI AGGCCT 3 cut(s) 2041, 4111, 4282
PcsI WCGNNNNNNNCGW 1 cut(s) 2786
PctI GAATGC 1 cut(s) 635
PdmI GAANNNNTTC 2 cut(s) 2258, 2987
PfeI GAWTC 6 cut(s) 441, 811, 1024, 1293, 1723, 3504
PflMI CCANNNNNTGG 1 cut(s) 847
PfoI TCCNGGA 2 cut(s) 668, 2219
PleI GAGTC 5 cut(s) 1042, 2310, 2453, 2951, 3592
PpsI GAGTC 5 cut(s) 1042, 2310, 2453, 2951, 3592
PshAI GACNNNNGTC 1 cut(s) 3692
PshBI ATTAAT 1 cut(s) 4197
Psp6I CCWGG 5 cut(s) 1776, 2395, 3064, 3723, 4441
PspEI GGTNACC 1 cut(s) 1772
PspFI CCCAGC 1 cut(s) 2738
PspGI CCWGG 5 cut(s) 1776, 2395, 3064, 3723, 4441
PspN4I GGNNCC 8 cut(s) 673, 866, 887, 912, 1381, 1782, 3592, 4002
PspPI GGNCC 9 cut(s) 672, 1780, 3023, 3215, 3292, 3527, 4000, 4237, 4439
PstI CTGCAG 4 cut(s) 2840, 3463, 3817, 4351
PstNI CAGNNNCTG 4 cut(s) 2210, 2378, 2381, 3812
PsuI RGATCY 3 cut(s) 910, 2546, 3431
PvuII CAGCTG 2 cut(s) 361, 2378
RsaI GTAC 6 cut(s) 60, 571, 1166, 2359, 3377, 4447
RsaNI GTAC 6 cut(s) 59, 570, 1165, 2358, 3376, 4446
RseI CAYNNNNRTG 7 cut(s) 879, 1443, 1647, 3093, 3654, 3778, 3867
Sau96I GGNCC 9 cut(s) 672, 1780, 3023, 3215, 3292, 3527, 4000, 4237, 4439
ScaI AGTACT 4 cut(s) 60, 1166, 2359, 3377
SchI GAGTC 5 cut(s) 1042, 2310, 2454, 2951, 3592
ScrFI CCNGG 9 cut(s) 446, 523, 670, 1778, 2221, 2397, 3066, 3725, 4443
SduI GDGCHC 8 cut(s) 452, 974, 1384, 3122, 3595, 3731, 3744, 3823
SexAI ACCWGGT 1 cut(s) 3064
SfaNI GCATC 7 cut(s) 1023, 1669, 1880, 1911, 2003, 3812, 4342
Sfr274I CTCGAG 2 cut(s) 303, 3168
SinI GGWCC 5 cut(s) 672, 1780, 3527, 4000, 4439
SlaI CTCGAG 2 cut(s) 303, 3168
SmiMI CAYNNNNRTG 7 cut(s) 879, 1443, 1647, 3093, 3654, 3778, 3867
SmlI CTYRAG 8 cut(s) 90, 303, 1259, 2017, 2385, 3168, 3470, 3639
SmoI CTYRAG 8 cut(s) 90, 303, 1259, 2017, 2385, 3168, 3470, 3639
SpeI ACTAGT 3 cut(s) 1492, 3419, 3703
SphI GCATGC 1 cut(s) 4471
SseBI AGGCCT 3 cut(s) 2041, 4111, 4282
SsiI CCGC 9 cut(s) 5, 272, 555, 1125, 2178, 2233, 2263, 2510, 2924
SspI AATATT 1 cut(s) 2723
StuI AGGCCT 3 cut(s) 2041, 4111, 4282
StyD4I CCNGG 9 cut(s) 444, 521, 668, 1776, 2219, 2395, 3064, 3723, 4441
TaiI ACGT 4 cut(s) 1827, 2792, 3940, 4047
TaqI TCGA 9 cut(s) 304, 1645, 1799, 2271, 2568, 2673, 3169, 4151, 4476
TatI WGTACW 4 cut(s) 58, 1164, 2357, 3375
TauI GCSGC 2 cut(s) 8, 2513
TfiI GAWTC 6 cut(s) 441, 811, 1024, 1293, 1723, 3504
TscAI CASTG 9 cut(s) 247, 585, 848, 1228, 1560, 2623, 3127, 3202, 4459
TseFI GTSAC 8 cut(s) 416, 574, 1820, 2627, 4040, 4163, 4324, 4460
Tsp45I GTSAC 8 cut(s) 416, 574, 1820, 2627, 4040, 4163, 4324, 4460
TspGWI ACGGA 2 cut(s) 945, 2146
TspRI CASTG 9 cut(s) 247, 585, 848, 1228, 1560, 2623, 3127, 3202, 4459
Van91I CCANNNNNTGG 1 cut(s) 847
VneI GTGCAC 1 cut(s) 3118
VpaK11BI GGWCC 5 cut(s) 672, 1780, 3527, 4000, 4439
VspI ATTAAT 1 cut(s) 4197
XapI RAATTY 9 cut(s) 292, 398, 511, 943, 1941, 2825, 3163, 3282, 4176
XceI RCATGY 2 cut(s) 478, 4471
XcmI CCANNNNNNNNNTGG 1 cut(s) 3062
XhoI CTCGAG 2 cut(s) 303, 3168
XmaJI CCTAGG 2 cut(s) 493, 2656
XmiI GTMKAC 2 cut(s) 1827, 3708
XmnI GAANNNNTTC 2 cut(s) 2258, 2987
ZraI GACGTC 2 cut(s) 1825, 4045
ZrmI AGTACT 4 cut(s) 60, 1166, 2359, 3377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.