Rmu_sc0001235.1_g000009

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001235.1
OG0000066
Physical Location & Seq
Forward (+)
45466 .. 48148
2683 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001235.1_g000009.1.cds

Sequence Viewer

Length: 1659 bp
atgcaattcatactggtagcggtgctggttctcttcgcatttgcggccacggctgaagaagcagtagcagctgaagccgtcctgcctcaagccaagcctgcctgcactgaccgctgtggcaacctcaccattccatatccatttggcatagggcctaattgttacatggcagaagccttttctgttagctgtaacacatccgctaaacccccgacagcaatgtggcgtgatagtcccatcgctattaacaacatatacctggctgaaggtgagatgcaaataacgcagtacgtagcctacgattgctatgacagcccgggctggaatgagtacaacgaaccattgctcgccgtgcctcctttcaccgtctctcataccagaaacaagttcattgccgttggttgcgatacttatgcaattttcataggttaccgtgcagacgaagagaggtacacgaccggatgcatgtccatatgtgacaaccttgacagcgttgaacagtcttgctccggggttgggtgttgccaaactgacatccctagaggacttgagaactacactgtcacactggagagctactataatcatacatacatactggacttcaatccatgcagctatgccttcattgtggaagaaggcaagtttaccttttccccgaatacaagtttgaaagacctctccaacactgaagagcttcccatgattcttaattgggaaattggggaagggtcatgtgatgaagctcaaaagaaagatgattatgcatgcaaggcaaatagtaagtgtgtcaatcggaccatcagcgatgagctatctggttatatttgtcactgccagccgggttatcaagggaacccctacctccctgatggttgccaaggtgtaactggcggcttcttagttctatttgttggaatttcatggatatgttgcggaataaagaaaagaaaattcaagaaactcaaagaaaagtactttaaagagaatggtggcttattgttactacagaaactcgctaataatgaaggctcagtggagacaacaaaaatattcaccacagaagaactagagaaggcaacaaacaattaccatgagagtagagtccttggagaaggaggctacggaacagtttataaagggatactacttgacaacaaagtggttgccataaagaagtccaaaggtggtacctcgatccagagtgaacagtttgttaatgaggtggttgttctttcccaaatcaaccacagaaatgtggtgaagctactagcaagcatctttgtttcttccatggatgaagattgcttaaaacaagttcatgatgatgccatagtgaatgagggaaacattgagacagtagaaaacgtggcgagtctcgcaaaaagatgtttgagggtaaaaggggaggaaaggcctaccatgaaagaagttgccatggagttagagggaatgacagttatggcaaagcatccatggggaaagaatgccatgttttgtccagaggagaatgagtacttgctcgggtcaccttcagacagttatgttatggatgttagaggaggtgatcgcaattctagtggtttaactactggtatgactattgggtatgacagcatgcaaatccagatgttgatgccacgtggtgatggacgatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

552

Amino Acids

61.01

Weight (kDa)

4.91

Isoelectric Point (pI)

39.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1137
Acc65I GGTACC 1 cut(s) 1190
AccB1I GGYRCC 1 cut(s) 1190
AciI CCGC 6 cut(s) 20, 44, 112, 201, 894, 936
AclWI GGATC 1 cut(s) 1192
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 2 cut(s) 918, 953
AcuI CTGAAG 5 cut(s) 75, 93, 285, 711, 1518
AcvI CACGTG 1 cut(s) 1643
AdeI CACNNNGTG 1 cut(s) 1646
AfaI GTAC 6 cut(s) 290, 332, 452, 977, 1192, 1517
AfiI CCNNNNNNNGG 1 cut(s) 516
AgsI TTSAA 4 cut(s) 497, 607, 673, 958
AjnI CCWGG 1 cut(s) 258
AluBI AGCT 8 cut(s) 71, 189, 576, 618, 697, 746, 814, 1267
AluI AGCT 8 cut(s) 71, 189, 576, 618, 697, 746, 814, 1267
Alw26I GTCTC 4 cut(s) 373, 1034, 1349, 1382
AlwI GGATC 1 cut(s) 1192
Ama87I CYCGRG 2 cut(s) 316, 1523
AoxI GGCC 3 cut(s) 45, 152, 1415
ApeKI GCWGC 2 cut(s) 68, 615
ApoI RAATTY 2 cut(s) 918, 953
Asp700I GAANNNNTTC 1 cut(s) 696
Asp718I GGTACC 1 cut(s) 1190
AspS9I GGNCC 2 cut(s) 152, 798
AsuC2I CCSGG 4 cut(s) 317, 318, 511, 843
AsuHPI GGTGA 8 cut(s) 118, 281, 355, 1048, 1273, 1521, 1577, 1658
AvaI CYCGRG 2 cut(s) 316, 1523
AvaII GGWCC 1 cut(s) 798
BanI GGYRCC 1 cut(s) 1190
BbrPI CACGTG 1 cut(s) 1643
BbvI GCAGC 2 cut(s) 80, 627
BccI CCATC 4 cut(s) 245, 809, 866, 1643
BceAI ACGGC 4 cut(s) 62, 66, 335, 380
BcgI CGANNNNNNTGC 2 cut(s) 395, 429
BciT130I CCWGG 1 cut(s) 260
BciVI GTATCC 1 cut(s) 1137
BcnI CCSGG 4 cut(s) 317, 318, 511, 843
BcoDI GTCTC 4 cut(s) 373, 1034, 1349, 1382
BfaI CTAG 4 cut(s) 540, 1070, 1271, 1578
BfmI CTRYAG 1 cut(s) 1007
BfuI GTATCC 1 cut(s) 1137
BisI GCNGC 4 cut(s) 45, 69, 616, 895
BlsI GCNGC 4 cut(s) 46, 70, 617, 896
BmcAI AGTACT 2 cut(s) 977, 1517
Bme1390I CCNGG 5 cut(s) 260, 317, 318, 511, 843
Bme18I GGWCC 1 cut(s) 798
BmeT110I CYCGRG 2 cut(s) 316, 1523
BmgT120I GGNCC 2 cut(s) 152, 798
BmiI GGNNCC 2 cut(s) 857, 1192
BmrFI CCNGG 5 cut(s) 260, 317, 318, 511, 843
BmsI GCATC 6 cut(s) 264, 452, 1287, 1318, 1480, 1626
BpmI CTGGAG 1 cut(s) 590
BpuEI CTTGAG 2 cut(s) 72, 569
BpuMI CCSGG 4 cut(s) 317, 318, 511, 843
BsaAI YACGTR 2 cut(s) 292, 1643
BsaJI CCNNGG 8 cut(s) 48, 316, 510, 880, 1108, 1293, 1437, 1475
BsaWI WCCGGW 1 cut(s) 458
BsaXI ACNNNNNCTCC 2 cut(s) 1499, 1529
Bsc4I CCNNNNNNNGG 1 cut(s) 516
Bse1I ACTGG 5 cut(s) 18, 573, 603, 895, 1597
Bse3DI GCAATG 3 cut(s) 225, 341, 390
BseBI CCWGG 1 cut(s) 260
BseDI CCNNGG 8 cut(s) 48, 316, 510, 880, 1108, 1293, 1437, 1475
BseGI GGATG 6 cut(s) 197, 467, 534, 1303, 1471, 1558
BseLI CCNNNNNNNGG 1 cut(s) 516
BseMI GCAATG 3 cut(s) 225, 341, 390
BseMII CTCAG 1 cut(s) 1047
BseNI ACTGG 5 cut(s) 18, 573, 603, 895, 1597
BseRI GAGGAG 2 cut(s) 1520, 1575
BseXI GCAGC 2 cut(s) 80, 627
BsgI GTGCAG 2 cut(s) 88, 456
Bsh1285I CGRYCG 1 cut(s) 459
BshFI GGCC 3 cut(s) 47, 154, 1417
BshNI GGYRCC 1 cut(s) 1190
BsiEI CGRYCG 1 cut(s) 459
BsiHKCI CYCGRG 2 cut(s) 316, 1523
BsiSI CCGG 4 cut(s) 317, 459, 510, 842
BslFI GGGAC 1 cut(s) 219
BslI CCNNNNNNNGG 1 cut(s) 516
BsmAI GTCTC 4 cut(s) 373, 1034, 1349, 1382
BsmBI CGTCTC 1 cut(s) 373
BsmFI GGGAC 1 cut(s) 219
BsmI GAATGC 1 cut(s) 1492
BsnI GGCC 3 cut(s) 47, 154, 1417
BsoBI CYCGRG 2 cut(s) 316, 1523
Bsp143I GATC 2 cut(s) 1197, 1567
Bsp19I CCATGG 3 cut(s) 1293, 1437, 1475
BspACI CCGC 6 cut(s) 20, 44, 112, 201, 894, 936
BspANI GGCC 3 cut(s) 47, 154, 1417
BspCNI CTCAG 1 cut(s) 1046
BspHI TCATGA 1 cut(s) 1321
BspLI GGNNCC 2 cut(s) 857, 1192
BspPI GGATC 1 cut(s) 1192
BspQI GCTCTTC 1 cut(s) 687
BspT107I GGYRCC 1 cut(s) 1190
BsrDI GCAATG 3 cut(s) 225, 341, 390
BsrI ACTGG 5 cut(s) 18, 573, 603, 895, 1597
BssECI CCNNGG 8 cut(s) 48, 316, 510, 880, 1108, 1293, 1437, 1475
BssMI GATC 2 cut(s) 1197, 1567
BssT1I CCWWGG 5 cut(s) 880, 1108, 1293, 1437, 1475
Bst2UI CCWGG 1 cut(s) 260
Bst4CI ACNGT 9 cut(s) 367, 434, 501, 562, 1132, 1212, 1360, 1459, 1541
Bst6I CTCTTC 3 cut(s) 38, 438, 687
BstBAI YACGTR 2 cut(s) 292, 1643
BstC8I GCNNGC 7 cut(s) 99, 103, 348, 769, 839, 1276, 1619
BstDEI CTNAG 2 cut(s) 901, 1033
BstDSI CCRYGG 4 cut(s) 48, 1293, 1437, 1475
BstEII GGTNACC 2 cut(s) 428, 1527
BstF5I GGATG 6 cut(s) 197, 467, 534, 1303, 1471, 1558
BstKTI GATC 2 cut(s) 1200, 1570
BstMAI GTCTC 4 cut(s) 373, 1034, 1349, 1382
BstMBI GATC 2 cut(s) 1197, 1567
BstMCI CGRYCG 1 cut(s) 459
BstNI CCWGG 1 cut(s) 260
BstNSI RCATGY 3 cut(s) 469, 771, 1621
BstPI GGTNACC 2 cut(s) 428, 1527
BstSCI CCNGG 5 cut(s) 258, 315, 316, 509, 841
BstSFI CTRYAG 1 cut(s) 1007
BstSNI TACGTA 1 cut(s) 292
BstV1I GCAGC 2 cut(s) 80, 627
BsuI GTATCC 1 cut(s) 1137
BsuRI GGCC 3 cut(s) 47, 154, 1417
BtgI CCRYGG 4 cut(s) 48, 1293, 1437, 1475
BtgZI GCGATG 2 cut(s) 223, 822
BtsCI GGATG 6 cut(s) 197, 467, 534, 1303, 1471, 1558
BtsI GCAGTG 1 cut(s) 832
BtsIMutI CAGTG 6 cut(s) 105, 558, 566, 687, 832, 1041
Cac8I GCNNGC 7 cut(s) 99, 103, 348, 769, 839, 1276, 1619
CciI TCATGA 1 cut(s) 1321
Cfr13I GGNCC 2 cut(s) 152, 798
Cfr9I CCCGGG 1 cut(s) 316
Csp6I GTAC 6 cut(s) 289, 331, 451, 976, 1191, 1516
CspCI CAANNNNNGTGG 2 cut(s) 1561, 1596
CviQI GTAC 6 cut(s) 289, 331, 451, 976, 1191, 1516
DdeI CTNAG 2 cut(s) 901, 1033
DpnI GATC 2 cut(s) 1199, 1569
DpnII GATC 2 cut(s) 1197, 1567
DraI TTTAAA 1 cut(s) 982
DraIII CACNNNGTG 1 cut(s) 1646
EaeI YGGCCR 1 cut(s) 45
Eam1104I CTCTTC 3 cut(s) 38, 438, 687
EarI CTCTTC 3 cut(s) 38, 438, 687
Eco105I TACGTA 1 cut(s) 292
Eco130I CCWWGG 5 cut(s) 880, 1108, 1293, 1437, 1475
Eco147I AGGCCT 1 cut(s) 1417
Eco47I GGWCC 1 cut(s) 798
Eco57I CTGAAG 5 cut(s) 75, 93, 285, 711, 1518
Eco72I CACGTG 1 cut(s) 1643
Eco88I CYCGRG 2 cut(s) 316, 1523
Eco91I GGTNACC 2 cut(s) 428, 1527
EcoO109I RGGNCCY 1 cut(s) 152
EcoO65I GGTNACC 2 cut(s) 428, 1527
EcoRII CCWGG 1 cut(s) 258
EcoT14I CCWWGG 5 cut(s) 880, 1108, 1293, 1437, 1475
EcoT22I ATGCAT 2 cut(s) 467, 769
ErhI CCWWGG 5 cut(s) 880, 1108, 1293, 1437, 1475
Esp3I CGTCTC 1 cut(s) 373
FalI AAGNNNNNCTT 2 cut(s) 635, 667
FaqI GGGAC 1 cut(s) 219
FauNDI CATATG 1 cut(s) 473
Fnu4HI GCNGC 4 cut(s) 45, 69, 616, 895
FokI GGATG 6 cut(s) 184, 474, 521, 1310, 1458, 1565
Fsp4HI GCNGC 4 cut(s) 45, 69, 616, 895
FspBI CTAG 4 cut(s) 540, 1070, 1271, 1578
GluI GCNGC 4 cut(s) 45, 69, 616, 895
GsuI CTGGAG 1 cut(s) 590
HaeIII GGCC 3 cut(s) 47, 154, 1417
HapII CCGG 4 cut(s) 317, 459, 510, 842
HinfI GANTC 3 cut(s) 706, 1104, 1375
HpaII CCGG 4 cut(s) 317, 459, 510, 842
HphI GGTGA 8 cut(s) 118, 281, 355, 1048, 1273, 1521, 1577, 1658
Hpy166II GTNNAC 3 cut(s) 453, 648, 1208
Hpy188I TCNGA 2 cut(s) 798, 1537
Hpy188III TCNNGA 5 cut(s) 958, 1201, 1322, 1502, 1627
Hpy8I GTNNAC 3 cut(s) 453, 648, 1208
HpyAV CCTTC 8 cut(s) 260, 632, 634, 722, 1022, 1069, 1109, 1542
HpyCH4III ACNGT 9 cut(s) 367, 434, 501, 562, 1132, 1212, 1360, 1459, 1541
HpyCH4IV ACGT 3 cut(s) 291, 1368, 1642
HpyF3I CTNAG 2 cut(s) 901, 1033
HpySE526I ACGT 3 cut(s) 291, 1368, 1642
KpnI GGTACC 1 cut(s) 1194
Kzo9I GATC 2 cut(s) 1197, 1567
LguI GCTCTTC 1 cut(s) 687
LmnI GCTCC 1 cut(s) 512
Lsp1109I GCAGC 2 cut(s) 80, 627
LweI GCATC 6 cut(s) 264, 452, 1287, 1318, 1480, 1626
MaeI CTAG 4 cut(s) 540, 1070, 1271, 1578
MaeII ACGT 3 cut(s) 291, 1368, 1642
MaeIII GTNAC 9 cut(s) 161, 191, 428, 476, 562, 830, 886, 1002, 1527
MalI GATC 2 cut(s) 1199, 1569
MboI GATC 2 cut(s) 1197, 1567
MboII GAAGA 8 cut(s) 25, 68, 455, 647, 704, 1076, 1281, 1313
MluCI AATT 9 cut(s) 5, 157, 417, 712, 720, 918, 953, 1087, 1573
MlyI GAGTC 2 cut(s) 1113, 1384
MmeI TCCRAC 2 cut(s) 708, 895
Mph1103I ATGCAT 2 cut(s) 467, 769
MroXI GAANNNNTTC 1 cut(s) 696
MseI TTAA 6 cut(s) 246, 711, 981, 1218, 1310, 1586
MslI CAYNNNNRTG 3 cut(s) 928, 1254, 1326
MspA1I CMGCKG 2 cut(s) 71, 114
MspI CCGG 4 cut(s) 317, 459, 510, 842
MspR9I CCNGG 5 cut(s) 260, 317, 318, 511, 843
Mva1269I GAATGC 1 cut(s) 1492
MvaI CCWGG 1 cut(s) 260
NciI CCSGG 4 cut(s) 317, 318, 511, 843
NcoI CCATGG 3 cut(s) 1293, 1437, 1475
NdeI CATATG 1 cut(s) 473
NdeII GATC 2 cut(s) 1197, 1567
NlaIV GGNNCC 2 cut(s) 857, 1192
NmuCI GTSAC 4 cut(s) 476, 562, 830, 1527
NsiI ATGCAT 2 cut(s) 467, 769
NspI RCATGY 3 cut(s) 469, 771, 1621
PaeI GCATGC 2 cut(s) 771, 1621
PagI TCATGA 1 cut(s) 1321
PceI AGGCCT 1 cut(s) 1417
PciSI GCTCTTC 1 cut(s) 687
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PctI GAATGC 1 cut(s) 1492
PdmI GAANNNNTTC 1 cut(s) 696
PfeI GAWTC 1 cut(s) 706
PkrI GCNGC 4 cut(s) 46, 70, 617, 896
PleI GAGTC 2 cut(s) 1112, 1383
PmaCI CACGTG 1 cut(s) 1643
PmlI CACGTG 1 cut(s) 1643
PpsI GAGTC 2 cut(s) 1112, 1383
Ppu21I YACGTR 2 cut(s) 292, 1643
PsiI TTATAA 1 cut(s) 1137
Psp6I CCWGG 1 cut(s) 258
PspCI CACGTG 1 cut(s) 1643
PspEI GGTNACC 2 cut(s) 428, 1527
PspGI CCWGG 1 cut(s) 258
PspN4I GGNNCC 2 cut(s) 857, 1192
PspPI GGNCC 2 cut(s) 152, 798
PvuII CAGCTG 1 cut(s) 71
RsaI GTAC 6 cut(s) 290, 332, 452, 977, 1192, 1517
RsaNI GTAC 6 cut(s) 289, 331, 451, 976, 1191, 1516
RseI CAYNNNNRTG 3 cut(s) 928, 1254, 1326
SapI GCTCTTC 1 cut(s) 687
SaqAI TTAA 6 cut(s) 246, 711, 981, 1218, 1310, 1586
SatI GCNGC 4 cut(s) 45, 69, 616, 895
Sau3AI GATC 2 cut(s) 1197, 1567
Sau96I GGNCC 2 cut(s) 152, 798
ScaI AGTACT 2 cut(s) 977, 1517
SchI GAGTC 2 cut(s) 1113, 1384
ScrFI CCNGG 5 cut(s) 260, 317, 318, 511, 843
SfaNI GCATC 6 cut(s) 264, 452, 1287, 1318, 1480, 1626
SfcI CTRYAG 1 cut(s) 1007
SinI GGWCC 1 cut(s) 798
SmaI CCCGGG 1 cut(s) 318
SmiMI CAYNNNNRTG 3 cut(s) 928, 1254, 1326
SmlI CTYRAG 2 cut(s) 87, 548
SmoI CTYRAG 2 cut(s) 87, 548
SnaBI TACGTA 1 cut(s) 292
SphI GCATGC 2 cut(s) 771, 1621
SrfI GCCCGGGC 1 cut(s) 318
Sse9I AATT 9 cut(s) 5, 157, 417, 712, 720, 918, 953, 1087, 1573
SseBI AGGCCT 1 cut(s) 1417
SsiI CCGC 6 cut(s) 20, 44, 112, 201, 894, 936
SspI AATATT 1 cut(s) 1053
SspMI CTAG 4 cut(s) 540, 1070, 1271, 1578
StuI AGGCCT 1 cut(s) 1417
StyD4I CCNGG 5 cut(s) 258, 315, 316, 509, 841
StyI CCWWGG 5 cut(s) 880, 1108, 1293, 1437, 1475
TaaI ACNGT 9 cut(s) 367, 434, 501, 562, 1132, 1212, 1360, 1459, 1541
TaiI ACGT 3 cut(s) 294, 1371, 1645
TaqI TCGA 1 cut(s) 1196
TasI AATT 9 cut(s) 5, 157, 417, 712, 720, 918, 953, 1087, 1573
TatI WGTACW 3 cut(s) 330, 975, 1515
TauI GCSGC 2 cut(s) 47, 897
TfiI GAWTC 1 cut(s) 706
Tru1I TTAA 6 cut(s) 246, 711, 981, 1218, 1310, 1586
Tru9I TTAA 6 cut(s) 246, 711, 981, 1218, 1310, 1586
TscAI CASTG 6 cut(s) 112, 565, 573, 694, 839, 1041
TseFI GTSAC 4 cut(s) 476, 562, 830, 1527
TseI GCWGC 2 cut(s) 68, 615
Tsp45I GTSAC 4 cut(s) 476, 562, 830, 1527
TspDTI ATGAA 9 cut(s) 379, 412, 616, 756, 912, 1041, 1310, 1314, 1439
TspGWI ACGGA 1 cut(s) 1140
TspMI CCCGGG 1 cut(s) 316
TspRI CASTG 6 cut(s) 112, 565, 573, 694, 839, 1041
VpaK11BI GGWCC 1 cut(s) 798
XapI RAATTY 2 cut(s) 918, 953
XceI RCATGY 3 cut(s) 469, 771, 1621
XcmI CCANNNNNNNNNTGG 1 cut(s) 887
XmaI CCCGGG 1 cut(s) 316
XmnI GAANNNNTTC 1 cut(s) 696
XspI CTAG 4 cut(s) 540, 1070, 1271, 1578
ZrmI AGTACT 2 cut(s) 977, 1517
Zsp2I ATGCAT 2 cut(s) 467, 769
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.