Rmu_sc0005223.1_g000010

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005223.1
OG0000066
Physical Location & Seq
Forward (+)
41925 .. 44482
2558 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005223.1_g000010.1.cds

Sequence Viewer

Length: 1746 bp
atggccgccttgcaggggatcttgctcatcatccaactctcattcgtaatcatcagagtattgattgtatcaacaacaacagcagtacctcaagcactgcctaactgccctgacaaatgtgggaatctcacagttccttatccattcggcatggccgaaggttgttaccgaggaaatgccttctttgtcaattgtagccaggcaaccgatcccccaatagcatatttgaccaaaaacggcactgtcatcattaccaacatatcccttactgagggtgagttgcaaatatcagactttatagctcgagattgctatagcgcctctgctctgagaaccagaaggaacagccctgtgctacggccgccttctccttacaccatctctgataccaaaaacaaattcattgccgttggttgtgacacctacgcaattttcaaaggattccggggcacagaacagtccataactgggtgcatgtcagtatatgggacttcaacccctgcagctttgcattcattgttgaagatacacagttcaagttctccgggaacacgttttcaacaactgaacagcactacacggcttccaatggttcttaattgggcaattggggatgagccagacccatgtgatgtagctaaaaagaggcaggatttcgtatgccagaactatagcaagtgtgtgaatcccacaaataggaatgattacatttgccagtgcttggatggttatgaagggaacccataccacccagatggttgccaagatattgatgagtgcaaggatccaaacctctgcaaccacggagagtgcaaaaatttggcaggaagttactactgttcatgctcaaaaggatacaagatcgacaacatgaatgacaagagttgcatcaaagagaatcccaaaaataaatcaaagatgactctcctgcttattatttcattgagtgtaagtacaggcttattggttttatttatggggatttcgtggatatgttgcgggataaagagaagacaatacactaaactcaaagaaaagtacttcaaagagaatggtggcttattgtttctacaacaacttgctagtcatggaggcactgtggagacaacaaaaatcttttccacagaagaacttgagaaggcaacaaacaattaccacgagagtagaatccttggagaaggaggctatggaacagtttacaaaggaatactaccagatgacaaagtggtggccataaagaagtcaaaaggtggtgccccaacccaaagtgatcagtttgttaacgaggtgattgttctttctcaaataaaccacagaaatgtggtgaagctactaggttgttgtttagagacagaagtgcctttactagtatatgagttcatcacccatggaactctttatgagcatatttataaaaaaagatcatcactgtcatttgaattacgaatgaagatagcagttgaaacggcagaagcactggcatacttacactcctcaacttcaaatccaatcatacatcgagatgtgaaagcagaaaatatactcttagatgatgcttatccagcaaaaatatcagactttggagcttcaagattgattccatcaggtcaaactgaaatacaaactttagtgctagggacattcggttacctagaccctgaatatctgcaatcgaaccaactaacagaaaagagtgacgtccacagctttgatgttgtcctagtggagctacttgttaagacttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EGF_CA GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

581

Amino Acids

64.25

Weight (kDa)

7.1

Isoelectric Point (pI)

36.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1413
AatII GACGTC 1 cut(s) 1701
AccB1I GGYRCC 1 cut(s) 1253
AccB7I CCANNNNNTGG 1 cut(s) 721
AciI CCGC 3 cut(s) 6, 362, 999
AclWI GGATC 4 cut(s) 26, 203, 779, 792
AcoI YGGCCR 4 cut(s) 3, 153, 359, 1230
AcsI RAATTY 2 cut(s) 398, 817
AcyI GRCGYC 1 cut(s) 1698
AfaI GTAC 3 cut(s) 87, 955, 1040
AfiI CCNNNNNNNGG 5 cut(s) 15, 271, 468, 696, 721
AflIII ACRYGT 1 cut(s) 551
AhlI ACTAGT 1 cut(s) 1366
AjnI CCWGG 1 cut(s) 198
AjuI GAANNNNNNNTTGG 2 cut(s) 383, 415
AluBI AGCT 7 cut(s) 302, 506, 638, 1330, 1586, 1707, 1729
AluI AGCT 7 cut(s) 302, 506, 638, 1330, 1586, 1707, 1729
Alw26I GTCTC 2 cut(s) 1097, 1343
AlwI GGATC 4 cut(s) 26, 203, 779, 792
Ama87I CYCGRG 1 cut(s) 303
AoxI GGCC 4 cut(s) 3, 153, 359, 1230
ApeKI GCWGC 1 cut(s) 503
ApoI RAATTY 2 cut(s) 398, 817
AspLEI GCGC 1 cut(s) 320
AsuC2I CCSGG 2 cut(s) 446, 546
AsuHPI GGTGA 4 cut(s) 287, 1300, 1336, 1375
AvaI CYCGRG 1 cut(s) 303
BaeGI GKGCMC 2 cut(s) 452, 1258
BaeI ACNNNNGTAYC 2 cut(s) 69, 102
BalI TGGCCA 1 cut(s) 1232
BamHI GGATCC 1 cut(s) 784
BanI GGYRCC 1 cut(s) 1253
BarI GAAGNNNNNNTAC 2 cut(s) 1347, 1379
BauI CACGAG 1 cut(s) 1157
BbsI GAAGAC 1 cut(s) 1018
BbvI GCAGC 1 cut(s) 515
BccI CCATC 4 cut(s) 386, 719, 749, 1609
BceAI ACGGC 5 cut(s) 253, 374, 392, 596, 1482
BciT130I CCWGG 1 cut(s) 200
BciVI GTATCC 1 cut(s) 848
BclI TGATCA 1 cut(s) 1270
BcnI CCSGG 2 cut(s) 446, 546
BcoDI GTCTC 2 cut(s) 1097, 1343
BcuI ACTAGT 1 cut(s) 1366
BfaI CTAG 6 cut(s) 1083, 1334, 1367, 1634, 1652, 1721
BfmI CTRYAG 3 cut(s) 313, 501, 670
BfoI RGCGCY 1 cut(s) 321
BfuI GTATCC 1 cut(s) 848
BisI GCNGC 3 cut(s) 6, 362, 504
BlsI GCNGC 3 cut(s) 7, 363, 505
BmcAI AGTACT 1 cut(s) 1040
Bme1390I CCNGG 3 cut(s) 200, 446, 546
BmeT110I CYCGRG 1 cut(s) 303
BmiI GGNNCC 3 cut(s) 740, 786, 1255
BmrFI CCNGG 3 cut(s) 200, 446, 546
BmrI ACTGGG 1 cut(s) 477
BmsI GCATC 2 cut(s) 897, 1543
BmuI ACTGGG 1 cut(s) 477
BpiI GAAGAC 1 cut(s) 1018
BpuEI CTTGAG 2 cut(s) 75, 1154
BpuMI CCSGG 2 cut(s) 446, 546
BsaBI GATNNNNATC 1 cut(s) 1557
BsaHI GRCGYC 1 cut(s) 1698
BsaJI CCNNGG 5 cut(s) 169, 445, 802, 1171, 1387
BsaXI ACNNNNNCTCC 4 cut(s) 1083, 1113, 1475, 1505
Bsc4I CCNNNNNNNGG 5 cut(s) 15, 271, 468, 696, 721
Bse1I ACTGG 3 cut(s) 472, 715, 1482
Bse3DI GCAATG 1 cut(s) 402
Bse8I GATNNNNATC 1 cut(s) 1557
BseBI CCWGG 1 cut(s) 200
BseDI CCNNGG 5 cut(s) 169, 445, 802, 1171, 1387
BseGI GGATG 3 cut(s) 30, 619, 730
BseJI GATNNNNATC 1 cut(s) 1557
BseLI CCNNNNNNNGG 5 cut(s) 15, 271, 468, 696, 721
BseMI GCAATG 1 cut(s) 402
BseMII CTCAG 2 cut(s) 261, 320
BseNI ACTGG 3 cut(s) 472, 715, 1482
BseRI GAGGAG 1 cut(s) 1483
BseSI GKGCMC 2 cut(s) 452, 1258
BseX3I CGGCCG 1 cut(s) 359
BseXI GCAGC 1 cut(s) 515
Bsh1285I CGRYCG 1 cut(s) 362
BshFI GGCC 4 cut(s) 5, 155, 361, 1232
BshNI GGYRCC 1 cut(s) 1253
BsiEI CGRYCG 1 cut(s) 362
BsiHKCI CYCGRG 1 cut(s) 303
BsiSI CCGG 2 cut(s) 445, 545
BslFI GGGAC 2 cut(s) 502, 1651
BslI CCNNNNNNNGG 5 cut(s) 15, 271, 468, 696, 721
BsmAI GTCTC 2 cut(s) 1097, 1343
BsmFI GGGAC 2 cut(s) 502, 1651
BsmI GAATGC 1 cut(s) 511
BsnI GGCC 4 cut(s) 5, 155, 361, 1232
BsoBI CYCGRG 1 cut(s) 303
Bsp1286I GDGCHC 2 cut(s) 452, 1258
Bsp143I GATC 6 cut(s) 18, 208, 784, 861, 1270, 1421
Bsp19I CCATGG 1 cut(s) 1387
BspACI CCGC 3 cut(s) 6, 362, 999
BspANI GGCC 4 cut(s) 5, 155, 361, 1232
BspCNI CTCAG 2 cut(s) 262, 321
BspLI GGNNCC 3 cut(s) 740, 786, 1255
BspMAI CTGCAG 1 cut(s) 505
BspPI GGATC 4 cut(s) 26, 203, 779, 792
BspT107I GGYRCC 1 cut(s) 1253
BsrDI GCAATG 1 cut(s) 402
BsrI ACTGG 3 cut(s) 472, 715, 1482
BssECI CCNNGG 5 cut(s) 169, 445, 802, 1171, 1387
BssMI GATC 6 cut(s) 18, 208, 784, 861, 1270, 1421
BssNI GRCGYC 1 cut(s) 1698
BssSI CACGAG 1 cut(s) 1157
BssT1I CCWWGG 2 cut(s) 1171, 1387
Bst2BI CACGAG 1 cut(s) 1157
Bst2UI CCWGG 1 cut(s) 200
Bst4CI ACNGT 8 cut(s) 133, 244, 459, 533, 839, 1099, 1195, 1431
BstACI GRCGYC 1 cut(s) 1698
BstDEI CTNAG 3 cut(s) 270, 329, 1546
BstDSI CCRYGG 2 cut(s) 802, 1387
BstEII GGTNACC 1 cut(s) 1646
BstENI CCTNNNNNAGG 1 cut(s) 269
BstF5I GGATG 3 cut(s) 30, 619, 730
BstH2I RGCGCY 1 cut(s) 321
BstHHI GCGC 1 cut(s) 320
BstKTI GATC 6 cut(s) 21, 211, 787, 864, 1273, 1424
BstMAI GTCTC 2 cut(s) 1097, 1343
BstMBI GATC 6 cut(s) 18, 208, 784, 861, 1270, 1421
BstMCI CGRYCG 1 cut(s) 362
BstMWI GCNNNNNNNGC 2 cut(s) 361, 1562
BstNI CCWGG 1 cut(s) 200
BstNSI RCATGY 1 cut(s) 478
BstPI GGTNACC 1 cut(s) 1646
BstSCI CCNGG 3 cut(s) 198, 444, 544
BstSFI CTRYAG 3 cut(s) 313, 501, 670
BstSLI GKGCMC 2 cut(s) 452, 1258
BstV1I GCAGC 1 cut(s) 515
BstV2I GAAGAC 1 cut(s) 1018
BstX2I RGATCY 2 cut(s) 18, 784
BstXI CCANNNNNNTGG 1 cut(s) 755
BstYI RGATCY 2 cut(s) 18, 784
BstZI CGGCCG 1 cut(s) 359
BsuI GTATCC 1 cut(s) 848
BsuRI GGCC 4 cut(s) 5, 155, 361, 1232
BtgI CCRYGG 2 cut(s) 802, 1387
BtsCI GGATG 3 cut(s) 30, 619, 730
BtsI GCAGTG 1 cut(s) 95
BtsIMutI CAGTG 6 cut(s) 95, 240, 722, 1095, 1427, 1475
CfoI GCGC 1 cut(s) 320
Csp6I GTAC 3 cut(s) 86, 954, 1039
CviAII CATG 7 cut(s) 151, 475, 627, 843, 871, 1088, 1388
CviQI GTAC 3 cut(s) 86, 954, 1039
DdeI CTNAG 3 cut(s) 270, 329, 1546
DpnI GATC 6 cut(s) 20, 210, 786, 863, 1272, 1423
DpnII GATC 6 cut(s) 18, 208, 784, 861, 1270, 1421
EaeI YGGCCR 4 cut(s) 3, 153, 359, 1230
EagI CGGCCG 1 cut(s) 359
EclXI CGGCCG 1 cut(s) 359
Eco130I CCWWGG 2 cut(s) 1171, 1387
Eco52I CGGCCG 1 cut(s) 359
Eco88I CYCGRG 1 cut(s) 303
Eco91I GGTNACC 1 cut(s) 1646
EcoNI CCTNNNNNAGG 1 cut(s) 269
EcoO65I GGTNACC 1 cut(s) 1646
EcoRII CCWGG 1 cut(s) 198
EcoT14I CCWWGG 2 cut(s) 1171, 1387
ErhI CCWWGG 2 cut(s) 1171, 1387
FaeI CATG 7 cut(s) 154, 478, 630, 846, 874, 1091, 1391
FaqI GGGAC 2 cut(s) 502, 1651
FatI CATG 7 cut(s) 150, 474, 626, 842, 870, 1087, 1387
FauI CCCGC 1 cut(s) 992
FbaI TGATCA 1 cut(s) 1270
Fnu4HI GCNGC 3 cut(s) 6, 362, 504
FokI GGATG 3 cut(s) 17, 626, 737
Fsp4HI GCNGC 3 cut(s) 6, 362, 504
FspBI CTAG 6 cut(s) 1083, 1334, 1367, 1634, 1652, 1721
GlaI GCGC 1 cut(s) 319
GluI GCNGC 3 cut(s) 6, 362, 504
HaeII RGCGCY 1 cut(s) 321
HaeIII GGCC 4 cut(s) 5, 155, 361, 1232
HapII CCGG 2 cut(s) 445, 545
HhaI GCGC 1 cut(s) 320
Hin1I GRCGYC 1 cut(s) 1698
Hin1II CATG 7 cut(s) 154, 478, 630, 846, 874, 1091, 1391
Hin6I GCGC 1 cut(s) 318
HinP1I GCGC 1 cut(s) 318
HincII GTYRAC 1 cut(s) 1282
HindII GTYRAC 1 cut(s) 1282
HinfI GANTC 7 cut(s) 124, 441, 685, 898, 922, 1167, 1597
HpaI GTTAAC 1 cut(s) 1282
HpaII CCGG 2 cut(s) 445, 545
HphI GGTGA 4 cut(s) 287, 1300, 1336, 1375
Hpy166II GTNNAC 3 cut(s) 1198, 1282, 1702
Hpy188I TCNGA 5 cut(s) 56, 292, 330, 385, 1576
Hpy188III TCNNGA 3 cut(s) 305, 1520, 1590
Hpy8I GTNNAC 3 cut(s) 1198, 1282, 1702
HpyAV CCTTC 7 cut(s) 152, 190, 333, 375, 728, 1132, 1172
HpyCH4III ACNGT 8 cut(s) 133, 244, 459, 533, 839, 1099, 1195, 1431
HpyCH4IV ACGT 2 cut(s) 553, 1698
HpyF10VI GCNNNNNNNGC 2 cut(s) 361, 1562
HpyF3I CTNAG 3 cut(s) 270, 329, 1546
HpySE526I ACGT 2 cut(s) 553, 1698
Hsp92I GRCGYC 1 cut(s) 1698
Hsp92II CATG 7 cut(s) 154, 478, 630, 846, 874, 1091, 1391
HspAI GCGC 1 cut(s) 318
Ksp22I TGATCA 1 cut(s) 1270
KspAI GTTAAC 1 cut(s) 1282
Kzo9I GATC 6 cut(s) 18, 208, 784, 861, 1270, 1421
LmnI GCTCC 2 cut(s) 1583, 1726
Lsp1109I GCAGC 1 cut(s) 515
LweI GCATC 2 cut(s) 897, 1543
MaeI CTAG 6 cut(s) 1083, 1334, 1367, 1634, 1652, 1721
MaeII ACGT 2 cut(s) 553, 1698
MaeIII GTNAC 5 cut(s) 164, 416, 830, 1646, 1694
MalI GATC 6 cut(s) 20, 210, 786, 863, 1272, 1423
MboI GATC 6 cut(s) 18, 208, 784, 861, 1270, 1421
MboII GAAGA 4 cut(s) 535, 1023, 1139, 1462
MfeI CAATTG 2 cut(s) 190, 606
MflI RGATCY 2 cut(s) 18, 784
MhlI GDGCHC 2 cut(s) 452, 1258
MlsI TGGCCA 1 cut(s) 1232
MluCI AATT 8 cut(s) 190, 398, 429, 598, 606, 817, 1150, 1439
MluNI TGGCCA 1 cut(s) 1232
MlyI GAGTC 1 cut(s) 916
MmeI TCCRAC 1 cut(s) 58
Mox20I TGGCCA 1 cut(s) 1232
MscI TGGCCA 1 cut(s) 1232
MseI TTAA 4 cut(s) 597, 1281, 1737, 1744
MslI CAYNNNNRTG 3 cut(s) 753, 1317, 1521
Msp20I TGGCCA 1 cut(s) 1232
MspI CCGG 2 cut(s) 445, 545
MspR9I CCNGG 3 cut(s) 200, 446, 546
MunI CAATTG 2 cut(s) 190, 606
Mva1269I GAATGC 1 cut(s) 511
MvaI CCWGG 1 cut(s) 200
MwoI GCNNNNNNNGC 2 cut(s) 361, 1562
NciI CCSGG 2 cut(s) 446, 546
NcoI CCATGG 1 cut(s) 1387
NdeII GATC 6 cut(s) 18, 208, 784, 861, 1270, 1421
NlaIII CATG 7 cut(s) 154, 478, 630, 846, 874, 1091, 1391
NlaIV GGNNCC 3 cut(s) 740, 786, 1255
NmuCI GTSAC 2 cut(s) 416, 1694
NspI RCATGY 1 cut(s) 478
PaeR7I CTCGAG 1 cut(s) 303
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PctI GAATGC 1 cut(s) 511
PfeI GAWTC 6 cut(s) 124, 441, 685, 898, 1167, 1597
PflMI CCANNNNNTGG 1 cut(s) 721
PfoI TCCNGGA 1 cut(s) 544
PkrI GCNGC 3 cut(s) 7, 363, 505
PleI GAGTC 1 cut(s) 916
PpsI GAGTC 1 cut(s) 916
PsiI TTATAA 1 cut(s) 1413
Psp6I CCWGG 1 cut(s) 198
PspEI GGTNACC 1 cut(s) 1646
PspGI CCWGG 1 cut(s) 198
PspN4I GGNNCC 3 cut(s) 740, 786, 1255
PstI CTGCAG 1 cut(s) 505
PsuI RGATCY 2 cut(s) 18, 784
RsaI GTAC 3 cut(s) 87, 955, 1040
RsaNI GTAC 3 cut(s) 86, 954, 1039
RseI CAYNNNNRTG 3 cut(s) 753, 1317, 1521
SaqAI TTAA 4 cut(s) 597, 1281, 1737, 1744
SatI GCNGC 3 cut(s) 6, 362, 504
Sau3AI GATC 6 cut(s) 18, 208, 784, 861, 1270, 1421
ScaI AGTACT 1 cut(s) 1040
SchI GAGTC 1 cut(s) 916
ScrFI CCNGG 3 cut(s) 200, 446, 546
SduI GDGCHC 2 cut(s) 452, 1258
SfaNI GCATC 2 cut(s) 897, 1543
SfcI CTRYAG 3 cut(s) 313, 501, 670
Sfr274I CTCGAG 1 cut(s) 303
SlaI CTCGAG 1 cut(s) 303
SmiMI CAYNNNNRTG 3 cut(s) 753, 1317, 1521
SmlI CTYRAG 3 cut(s) 90, 303, 1133
SmoI CTYRAG 3 cut(s) 90, 303, 1133
SpeI ACTAGT 1 cut(s) 1366
Sse9I AATT 8 cut(s) 190, 398, 429, 598, 606, 817, 1150, 1439
SsiI CCGC 3 cut(s) 6, 362, 999
SspMI CTAG 6 cut(s) 1083, 1334, 1367, 1634, 1652, 1721
StyD4I CCNGG 3 cut(s) 198, 444, 544
StyI CCWWGG 2 cut(s) 1171, 1387
TaaI ACNGT 8 cut(s) 133, 244, 459, 533, 839, 1099, 1195, 1431
TaiI ACGT 2 cut(s) 556, 1701
TaqI TCGA 4 cut(s) 304, 864, 1519, 1673
TasI AATT 8 cut(s) 190, 398, 429, 598, 606, 817, 1150, 1439
TatI WGTACW 2 cut(s) 953, 1038
TauI GCSGC 2 cut(s) 8, 364
TfiI GAWTC 6 cut(s) 124, 441, 685, 898, 1167, 1597
Tru1I TTAA 4 cut(s) 597, 1281, 1737, 1744
Tru9I TTAA 4 cut(s) 597, 1281, 1737, 1744
TscAI CASTG 6 cut(s) 102, 247, 722, 1102, 1434, 1482
TseFI GTSAC 2 cut(s) 416, 1694
TseI GCWGC 1 cut(s) 503
Tsp45I GTSAC 2 cut(s) 416, 1694
TspDTI ATGAA 8 cut(s) 391, 504, 747, 831, 887, 930, 1369, 1463
TspGWI ACGGA 1 cut(s) 819
TspRI CASTG 6 cut(s) 102, 247, 722, 1102, 1434, 1482
Van91I CCANNNNNTGG 1 cut(s) 721
XagI CCTNNNNNAGG 1 cut(s) 269
XapI RAATTY 2 cut(s) 398, 817
XceI RCATGY 1 cut(s) 478
XcmI CCANNNNNNNNNTGG 1 cut(s) 722
XhoI CTCGAG 1 cut(s) 303
XspI CTAG 6 cut(s) 1083, 1334, 1367, 1634, 1652, 1721
ZraI GACGTC 1 cut(s) 1699
ZrmI AGTACT 1 cut(s) 1040
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.