Rw5G010850
ERF Family

DNA RNA polymerases superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000066
Physical Location & Seq
Forward (+)
11977727 .. 11980232
2506 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G010850.1

Sequence Viewer

Length: 1839 bp
ATGCAAGTAATGTTGCCAACATCCCGAAACTGCTATACCAACAATTCATACGACGAATCTTTGTACAGACACAGTCAGCTCATCCTTCCCTCTGGTTATACCATCTCTGATAAAAACACAGTTTACATCATTGGGTGTAACAAAATAACACTATATCGAGGACTTGGAAGCACATCACAGTGGGGACTAGACTACCCGTGTAGCTACGGTTTCATTGTGGATGAACGCAATTTCACCTTCGCCGGAAATGCAACTTTTAGAGAGCTAGACAGCACCATGGCCACAAGGCCGGAGCTTCCGGTGGTTGTTAACTGGGAAATTGGGAAGGACAACTGTGAAGCAGCCTCTAATAATCAAGTTTCTTATGCATGCCAGGCCGCAAATACTGAATGTGTCAACGGCTCTTCTGGTGGATATTTTTGCCGGTGCCAGAAAGGTTACCAGGGGAACCCATACGTCCTTGATGGTTGCCAAGATGTTGATGAGTGTACTAATTCGACCATCTGCCATCCTACTTCAAAGTGCACAAATTTAATAGGAAATTACTCCTGTATATGTCCCGAAGGCCAAACAAATGATCACAATAACAACAATCCTTGCGTCAAAATCGTCGGAAAACCAAATAATACTTCCCTCCAAATTTCACTGGGTGTCTGTTTAATCTTGGTGGTGGTACTTGTCCTAACATTTTGGATATATTGCGGAATGAAGAGAAGAAAATTCAGGCAACTCAAGGAGAAGTACTTCAAAGAGAATGGTGGCTTATTGTTACAACAAAAGTTGGAGAATTTCAATGGACCTCAAGCAGCCAAAATCTTTACGAACGAAGAGCTAAATAATGCCACAAACAACTTCGATGACAGCGGAAAAATTGGTGAAGGAGGCTCTGGATTTGTTTACAAAGGAACGTTGCCAGATAAAAAGGAGGTTGCCATTAAGGTGTCAAAGAGCAATGCTCCAATGACCCAAAGTAATCAGTTCATTAATGAGGTGATTGTTCTTTCTCAAATCAACCATAGAAATGTGGTGAGGCTCCTAGGTTGTTGTTTAGAGACTCAAACGCCTTTATTAGTTTACGAGTTTGGACCGCTTTCTTTTGGGTTACGAATGAAGATAGCAACAGAAACAGCAGGATCACTAGCATACTTGCACTACTCCACTTCCATGCAAATCGTGCACCGAGATGTGAAAGCAACCAATATACTACTGGATGAGAACTTCATAGCAAAAGTGTCGGACTTTGGAGCTTCAAAATTGGTTCCTGAAGATCAAAATCAGTTGTCTACTTTAGTGCAAGGGACGCTAGGATACTTGGATCCTGAGTATCTTCAATCAAACACACTGACAGAGAAGACTCAGAAGAGTGATGTCTATAGTTTCGGGGTTGTCCTTGTGGAGCTAATAACGAGTCAAGTGGCAATTTCTTACAAGAAGCCTGAGGCAGAGAGAAACCTAGCAAAAGTTTTTGTTACGTCGGTGGAAGAGAATCGCTTGGCTCAGATTCTTGATCATGAAATAATCAAAGAGGGAAGTTTTGAAATAGCTGAACAAGTGGCCCATCTCGCCAAAAGATGTTTAAGTTTGAAAGGAGGGGATAGGCCTACCATGAAAGAAGTAACTATGGAGCTAGAGGGAATTTTGGCAGTTATGGCAAAGCATCCGGGGGGAAAGCCTGACTCCTCTCCTAAAGAGACGGACTACTTGCTTGCGGCGTCACCTTCAAACGCTTACGCTGTTGATGTTAGAGGTGATGAAGGTGAAGTCATGACCAGAATCGATTACGACCAGAGCATGCAGAATCAACCCCAGATGATGAAGCCTTATGACGGTGGGAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RVT_1 Retrotrans_gag rve zf-H2C2

Protein Analysis

612

Amino Acids

67.84

Weight (kDa)

5.66

Isoelectric Point (pI)

28.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EGF_CA PF07645 159 - 196 2.6e-06 Calcium-binding EGF domain
Pkinase PF00069 287 - 540 1.1e-38 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 290 - 543 1.4e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 426
AccI GTMKAC 1 cut(s) 1283
AciI CCGC 5 cut(s) 378, 702, 864, 1088, 1709
AclI AACGTT 1 cut(s) 908
AclWI GGATC 3 cut(s) 1141, 1310, 1323
AcoI YGGCCR 1 cut(s) 279
AcsI RAATTY 5 cut(s) 529, 639, 719, 787, 1635
AcuI CTGAAG 1 cut(s) 1284
AcyI GRCGYC 1 cut(s) 1712
AdeI CACNNNGTG 1 cut(s) 650
AfaI GTAC 4 cut(s) 65, 490, 675, 743
AfiI CCNNNNNNNGG 1 cut(s) 1826
AgsI TTSAA 8 cut(s) 519, 748, 793, 1251, 1331, 1538, 1585, 1722
AjnI CCWGG 2 cut(s) 372, 441
AjuI GAANNNNNNNTTGG 2 cut(s) 613, 645
AluBI AGCT 9 cut(s) 79, 204, 265, 295, 832, 1247, 1399, 1544, 1627
AluI AGCT 9 cut(s) 79, 204, 265, 295, 832, 1247, 1399, 1544, 1627
Alw21I GWGCWC 2 cut(s) 527, 1179
Alw26I GTCTC 2 cut(s) 1046, 1685
Alw44I GTGCAC 2 cut(s) 523, 1175
AlwI GGATC 3 cut(s) 1141, 1310, 1323
AoxI GGCC 6 cut(s) 279, 287, 375, 565, 1554, 1598
ApaLI GTGCAC 2 cut(s) 523, 1175
ApeKI GCWGC 2 cut(s) 341, 806
ApoI RAATTY 5 cut(s) 529, 639, 719, 787, 1635
AseI ATTAAT 1 cut(s) 984
Asp700I GAANNNNTTC 1 cut(s) 743
AspA2I CCTAGG 1 cut(s) 1036
AspS9I GGNCC 3 cut(s) 797, 1085, 1555
AsuC2I CCSGG 1 cut(s) 1662
AsuHPI GGTGA 7 cut(s) 226, 887, 1003, 1039, 1707, 1760, 1769
AvaII GGWCC 2 cut(s) 797, 1085
AvrII CCTAGG 1 cut(s) 1036
AxyI CCTNAGG 1 cut(s) 1437
BaeGI GKGCMC 2 cut(s) 527, 1179
BalI TGGCCA 1 cut(s) 281
BamHI GGATCC 1 cut(s) 1315
BanI GGYRCC 1 cut(s) 426
BbsI GAAGAC 1 cut(s) 1358
Bbv12I GWGCWC 2 cut(s) 527, 1179
BbvI GCAGC 2 cut(s) 353, 818
BccI CCATC 5 cut(s) 110, 458, 509, 516, 1566
BceAI ACGGC 1 cut(s) 415
BcgI CGANNNNNNTGC 2 cut(s) 1215, 1249
BciT130I CCWGG 2 cut(s) 374, 443
BciVI GTATCC 1 cut(s) 1301
BclI TGATCA 2 cut(s) 577, 1507
BcnI CCSGG 1 cut(s) 1662
BcoDI GTCTC 2 cut(s) 1046, 1685
BfaI CTAG 7 cut(s) 188, 266, 1037, 1139, 1304, 1454, 1628
BfmI CTRYAG 1 cut(s) 1372
BfuI GTATCC 1 cut(s) 1301
BisI GCNGC 4 cut(s) 342, 378, 807, 1710
BlnI CCTAGG 1 cut(s) 1036
BlsI GCNGC 4 cut(s) 343, 379, 808, 1711
BmcAI AGTACT 1 cut(s) 743
Bme1390I CCNGG 3 cut(s) 374, 443, 1662
Bme18I GGWCC 2 cut(s) 797, 1085
BmgT120I GGNCC 3 cut(s) 797, 1085, 1555
BmiI GGNNCC 5 cut(s) 428, 449, 1034, 1260, 1317
BmrFI CCNGG 3 cut(s) 374, 443, 1662
BmrI ACTGGG 2 cut(s) 322, 656
BmsI GCATC 1 cut(s) 1666
BmuI ACTGGG 2 cut(s) 322, 656
BpiI GAAGAC 1 cut(s) 1358
BplI GAGNNNNNCTC 2 cut(s) 940, 972
BpuEI CTTGAG 2 cut(s) 716, 786
BpuMI CCSGG 1 cut(s) 1662
Bsa29I ATCGAT 1 cut(s) 1776
BsaBI GATNNNNATC 1 cut(s) 1272
BsaHI GRCGYC 1 cut(s) 1712
BsaJI CCNNGG 4 cut(s) 276, 442, 1036, 1661
BsaWI WCCGGW 1 cut(s) 298
Bsc4I CCNNNNNNNGG 1 cut(s) 1826
Bse118I RCCGGY 1 cut(s) 423
Bse1I ACTGG 3 cut(s) 317, 651, 1212
Bse21I CCTNAGG 1 cut(s) 1437
Bse3DI GCAATG 1 cut(s) 958
Bse8I GATNNNNATC 1 cut(s) 1272
BseBI CCWGG 2 cut(s) 374, 443
BseCI ATCGAT 1 cut(s) 1776
BseDI CCNNGG 4 cut(s) 276, 442, 1036, 1661
BseGI GGATG 6 cut(s) 20, 81, 226, 508, 1216, 1657
BseJI GATNNNNATC 1 cut(s) 1272
BseLI CCNNNNNNNGG 1 cut(s) 1826
BseMI GCAATG 1 cut(s) 958
BseMII CTCAG 4 cut(s) 1311, 1370, 1428, 1511
BseNI ACTGG 3 cut(s) 317, 651, 1212
BseRI GAGGAG 1 cut(s) 1669
BseSI GKGCMC 2 cut(s) 527, 1179
BseXI GCAGC 2 cut(s) 353, 818
BshFI GGCC 6 cut(s) 281, 289, 377, 567, 1556, 1600
BshNI GGYRCC 1 cut(s) 426
BshVI ATCGAT 1 cut(s) 1776
BsiHKAI GWGCWC 2 cut(s) 527, 1179
BsiSI CCGG 5 cut(s) 243, 290, 299, 424, 1661
BslFI GGGAC 3 cut(s) 198, 543, 1312
BslI CCNNNNNNNGG 1 cut(s) 1826
BsmAI GTCTC 2 cut(s) 1046, 1685
BsmBI CGTCTC 1 cut(s) 1685
BsmFI GGGAC 3 cut(s) 198, 543, 1312
BsnI GGCC 6 cut(s) 281, 289, 377, 567, 1556, 1600
Bsp1286I GDGCHC 2 cut(s) 527, 1179
Bsp1407I TGTACA 1 cut(s) 63
Bsp143I GATC 5 cut(s) 577, 1133, 1267, 1315, 1507
Bsp19I CCATGG 1 cut(s) 276
BspACI CCGC 5 cut(s) 378, 702, 864, 1088, 1709
BspANI GGCC 6 cut(s) 281, 289, 377, 567, 1556, 1600
BspCNI CTCAG 4 cut(s) 1312, 1369, 1429, 1510
BspDI ATCGAT 1 cut(s) 1776
BspHI TCATGA 2 cut(s) 1510, 1764
BspLI GGNNCC 5 cut(s) 428, 449, 1034, 1260, 1317
BspPI GGATC 3 cut(s) 1141, 1310, 1323
BspQI GCTCTTC 2 cut(s) 409, 822
BspT107I GGYRCC 1 cut(s) 426
BsrDI GCAATG 1 cut(s) 958
BsrFI RCCGGY 1 cut(s) 423
BsrGI TGTACA 1 cut(s) 63
BsrI ACTGG 3 cut(s) 317, 651, 1212
BssAI RCCGGY 1 cut(s) 423
BssECI CCNNGG 4 cut(s) 276, 442, 1036, 1661
BssMI GATC 5 cut(s) 577, 1133, 1267, 1315, 1507
BssNI GRCGYC 1 cut(s) 1712
BssT1I CCWWGG 2 cut(s) 276, 1036
Bst2UI CCWGG 2 cut(s) 374, 443
Bst4CI ACNGT 6 cut(s) 74, 121, 180, 209, 335, 1829
Bst6I CTCTTC 5 cut(s) 409, 704, 822, 1355, 1476
BstACI GRCGYC 1 cut(s) 1712
BstAPI GCANNNNNTGC 1 cut(s) 1174
BstAUI TGTACA 1 cut(s) 63
BstC8I GCNNGC 3 cut(s) 370, 1707, 1793
BstDEI CTNAG 4 cut(s) 1320, 1356, 1437, 1497
BstDSI CCRYGG 1 cut(s) 276
BstEII GGTNACC 1 cut(s) 437
BstF5I GGATG 6 cut(s) 20, 81, 226, 508, 1216, 1657
BstKTI GATC 5 cut(s) 580, 1136, 1270, 1318, 1510
BstMAI GTCTC 2 cut(s) 1046, 1685
BstMBI GATC 5 cut(s) 577, 1133, 1267, 1315, 1507
BstMWI GCNNNNNNNGC 6 cut(s) 248, 374, 1174, 1300, 1562, 1649
BstNI CCWGG 2 cut(s) 374, 443
BstNSI RCATGY 2 cut(s) 372, 1795
BstPI GGTNACC 1 cut(s) 437
BstSCI CCNGG 3 cut(s) 372, 441, 1660
BstSFI CTRYAG 1 cut(s) 1372
BstSLI GKGCMC 2 cut(s) 527, 1179
BstV1I GCAGC 2 cut(s) 353, 818
BstV2I GAAGAC 1 cut(s) 1358
BstX2I RGATCY 1 cut(s) 1315
BstYI RGATCY 1 cut(s) 1315
Bsu15I ATCGAT 1 cut(s) 1776
Bsu36I CCTNAGG 1 cut(s) 1437
BsuI GTATCC 1 cut(s) 1301
BsuRI GGCC 6 cut(s) 281, 289, 377, 567, 1556, 1600
BsuTUI ATCGAT 1 cut(s) 1776
BtgI CCRYGG 1 cut(s) 276
BtsCI GGATG 6 cut(s) 20, 81, 226, 508, 1216, 1657
BtsIMutI CAGTG 3 cut(s) 185, 644, 1340
Cac8I GCNNGC 3 cut(s) 370, 1707, 1793
CciI TCATGA 2 cut(s) 1510, 1764
Cfr10I RCCGGY 1 cut(s) 423
Cfr13I GGNCC 3 cut(s) 797, 1085, 1555
ClaI ATCGAT 1 cut(s) 1776
CseI GACGC 3 cut(s) 589, 1309, 1701
Csp6I GTAC 4 cut(s) 64, 489, 674, 742
CviAII CATG 7 cut(s) 277, 369, 1165, 1511, 1606, 1765, 1792
CviQI GTAC 4 cut(s) 64, 489, 674, 742
DdeI CTNAG 4 cut(s) 1320, 1356, 1437, 1497
DpnI GATC 5 cut(s) 579, 1135, 1269, 1317, 1509
DpnII GATC 5 cut(s) 577, 1133, 1267, 1315, 1507
DraIII CACNNNGTG 1 cut(s) 650
EaeI YGGCCR 1 cut(s) 279
Eam1104I CTCTTC 5 cut(s) 409, 704, 822, 1355, 1476
EarI CTCTTC 5 cut(s) 409, 704, 822, 1355, 1476
Eco130I CCWWGG 2 cut(s) 276, 1036
Eco147I AGGCCT 1 cut(s) 1600
Eco47I GGWCC 2 cut(s) 797, 1085
Eco57I CTGAAG 1 cut(s) 1284
Eco81I CCTNAGG 1 cut(s) 1437
Eco91I GGTNACC 1 cut(s) 437
EcoO65I GGTNACC 1 cut(s) 437
EcoRII CCWGG 2 cut(s) 372, 441
EcoT14I CCWWGG 2 cut(s) 276, 1036
EcoT22I ATGCAT 1 cut(s) 370
ErhI CCWWGG 2 cut(s) 276, 1036
Esp3I CGTCTC 1 cut(s) 1685
FaeI CATG 7 cut(s) 280, 372, 1168, 1514, 1609, 1768, 1795
FaqI GGGAC 3 cut(s) 198, 543, 1312
FatI CATG 7 cut(s) 276, 368, 1164, 1510, 1605, 1764, 1791
FbaI TGATCA 2 cut(s) 577, 1507
FblI GTMKAC 1 cut(s) 1283
Fnu4HI GCNGC 4 cut(s) 342, 378, 807, 1710
FokI GGATG 6 cut(s) 7, 68, 233, 495, 1223, 1644
Fsp4HI GCNGC 4 cut(s) 342, 378, 807, 1710
FspBI CTAG 7 cut(s) 188, 266, 1037, 1139, 1304, 1454, 1628
GluI GCNGC 4 cut(s) 342, 378, 807, 1710
HaeIII GGCC 6 cut(s) 281, 289, 377, 567, 1556, 1600
HapII CCGG 5 cut(s) 243, 290, 299, 424, 1661
HgaI GACGC 3 cut(s) 589, 1309, 1701
Hin1I GRCGYC 1 cut(s) 1712
Hin1II CATG 7 cut(s) 280, 372, 1168, 1514, 1609, 1768, 1795
HincII GTYRAC 2 cut(s) 310, 397
HindII GTYRAC 2 cut(s) 310, 397
HinfI GANTC 9 cut(s) 56, 1054, 1354, 1408, 1486, 1501, 1676, 1773, 1798
HpaI GTTAAC 1 cut(s) 310
HpaII CCGG 5 cut(s) 243, 290, 299, 424, 1661
HphI GGTGA 7 cut(s) 226, 887, 1003, 1039, 1707, 1760, 1769
Hpy166II GTNNAC 9 cut(s) 124, 310, 397, 489, 525, 898, 1075, 1177, 1284
Hpy188I TCNGA 5 cut(s) 109, 614, 1237, 1359, 1500
Hpy188III TCNNGA 8 cut(s) 24, 560, 888, 1262, 1319, 1505, 1511, 1765
Hpy8I GTNNAC 9 cut(s) 124, 310, 397, 489, 525, 898, 1075, 1177, 1284
Hpy99I CGWCG 3 cut(s) 56, 614, 1477
HpyAV CCTTC 7 cut(s) 95, 247, 319, 557, 872, 1728, 1748
HpyCH4III ACNGT 6 cut(s) 74, 121, 180, 209, 335, 1829
HpyCH4IV ACGT 3 cut(s) 456, 908, 1472
HpyCH4V TGCA 9 cut(s) 4, 251, 368, 525, 1150, 1168, 1177, 1294, 1795
HpyF10VI GCNNNNNNNGC 6 cut(s) 248, 374, 1174, 1300, 1562, 1649
HpyF3I CTNAG 4 cut(s) 1320, 1356, 1437, 1497
HpySE526I ACGT 3 cut(s) 456, 908, 1472
Hsp92I GRCGYC 1 cut(s) 1712
Hsp92II CATG 7 cut(s) 280, 372, 1168, 1514, 1609, 1768, 1795
Ksp22I TGATCA 2 cut(s) 577, 1507
KspAI GTTAAC 1 cut(s) 310
Kzo9I GATC 5 cut(s) 577, 1133, 1267, 1315, 1507
LguI GCTCTTC 2 cut(s) 409, 822
LmnI GCTCC 6 cut(s) 292, 961, 1038, 1244, 1396, 1624
Lsp1109I GCAGC 2 cut(s) 353, 818
LweI GCATC 1 cut(s) 1666
MaeI CTAG 7 cut(s) 188, 266, 1037, 1139, 1304, 1454, 1628
MaeII ACGT 3 cut(s) 456, 908, 1472
MaeIII GTNAC 7 cut(s) 137, 437, 768, 1101, 1468, 1615, 1713
MalI GATC 5 cut(s) 579, 1135, 1269, 1317, 1509
MboI GATC 5 cut(s) 577, 1133, 1267, 1315, 1507
MflI RGATCY 1 cut(s) 1315
MhlI GDGCHC 2 cut(s) 527, 1179
MlsI TGGCCA 1 cut(s) 281
MluNI TGGCCA 1 cut(s) 281
MlyI GAGTC 4 cut(s) 1048, 1348, 1417, 1670
MmeI TCCRAC 3 cut(s) 592, 762, 1215
Mox20I TGGCCA 1 cut(s) 281
Mph1103I ATGCAT 1 cut(s) 370
MroXI GAANNNNTTC 1 cut(s) 743
MscI TGGCCA 1 cut(s) 281
MseI TTAA 6 cut(s) 309, 533, 659, 936, 984, 1577
MslI CAYNNNNRTG 5 cut(s) 178, 938, 1020, 1163, 1182
Msp20I TGGCCA 1 cut(s) 281
MspA1I CMGCKG 1 cut(s) 864
MspI CCGG 5 cut(s) 243, 290, 299, 424, 1661
MspR9I CCNGG 3 cut(s) 374, 443, 1662
MvaI CCWGG 2 cut(s) 374, 443
MwoI GCNNNNNNNGC 6 cut(s) 248, 374, 1174, 1300, 1562, 1649
NciI CCSGG 1 cut(s) 1662
NcoI CCATGG 1 cut(s) 276
NdeII GATC 5 cut(s) 577, 1133, 1267, 1315, 1507
NlaIII CATG 7 cut(s) 280, 372, 1168, 1514, 1609, 1768, 1795
NlaIV GGNNCC 5 cut(s) 428, 449, 1034, 1260, 1317
NmuCI GTSAC 1 cut(s) 1713
NsiI ATGCAT 1 cut(s) 370
NspI RCATGY 2 cut(s) 372, 1795
PaeI GCATGC 2 cut(s) 372, 1795
PagI TCATGA 2 cut(s) 1510, 1764
PceI AGGCCT 1 cut(s) 1600
PciSI GCTCTTC 2 cut(s) 409, 822
PdmI GAANNNNTTC 1 cut(s) 743
PfeI GAWTC 5 cut(s) 56, 1486, 1501, 1773, 1798
PflFI GACNNNGTC 1 cut(s) 72
PkrI GCNGC 4 cut(s) 343, 379, 808, 1711
PleI GAGTC 4 cut(s) 1048, 1348, 1416, 1670
PpsI GAGTC 4 cut(s) 1048, 1348, 1416, 1670
PshBI ATTAAT 1 cut(s) 984
Psp1406I AACGTT 1 cut(s) 908
Psp6I CCWGG 2 cut(s) 372, 441
PspEI GGTNACC 1 cut(s) 437
PspGI CCWGG 2 cut(s) 372, 441
PspN4I GGNNCC 5 cut(s) 428, 449, 1034, 1260, 1317
PspPI GGNCC 3 cut(s) 797, 1085, 1555
PsuI RGATCY 1 cut(s) 1315
PsyI GACNNNGTC 1 cut(s) 72
RsaI GTAC 4 cut(s) 65, 490, 675, 743
RsaNI GTAC 4 cut(s) 64, 489, 674, 742
RseI CAYNNNNRTG 5 cut(s) 178, 938, 1020, 1163, 1182
SapI GCTCTTC 2 cut(s) 409, 822
SaqAI TTAA 6 cut(s) 309, 533, 659, 936, 984, 1577
SatI GCNGC 4 cut(s) 342, 378, 807, 1710
Sau3AI GATC 5 cut(s) 577, 1133, 1267, 1315, 1507
Sau96I GGNCC 3 cut(s) 797, 1085, 1555
ScaI AGTACT 1 cut(s) 743
SchI GAGTC 4 cut(s) 1048, 1348, 1417, 1670
ScrFI CCNGG 3 cut(s) 374, 443, 1662
SduI GDGCHC 2 cut(s) 527, 1179
SfaNI GCATC 1 cut(s) 1666
SfcI CTRYAG 1 cut(s) 1372
SinI GGWCC 2 cut(s) 797, 1085
SmiMI CAYNNNNRTG 5 cut(s) 178, 938, 1020, 1163, 1182
SmlI CTYRAG 2 cut(s) 731, 801
SmoI CTYRAG 2 cut(s) 731, 801
SphI GCATGC 2 cut(s) 372, 1795
SseBI AGGCCT 1 cut(s) 1600
SsiI CCGC 5 cut(s) 378, 702, 864, 1088, 1709
SspMI CTAG 7 cut(s) 188, 266, 1037, 1139, 1304, 1454, 1628
StuI AGGCCT 1 cut(s) 1600
StyD4I CCNGG 3 cut(s) 372, 441, 1660
StyI CCWWGG 2 cut(s) 276, 1036
TaaI ACNGT 6 cut(s) 74, 121, 180, 209, 335, 1829
TaiI ACGT 3 cut(s) 459, 911, 1475
TaqI TCGA 4 cut(s) 157, 497, 855, 1776
TatI WGTACW 3 cut(s) 63, 488, 741
TauI GCSGC 2 cut(s) 380, 1712
TfiI GAWTC 5 cut(s) 56, 1486, 1501, 1773, 1798
Tru1I TTAA 6 cut(s) 309, 533, 659, 936, 984, 1577
Tru9I TTAA 6 cut(s) 309, 533, 659, 936, 984, 1577
TscAI CASTG 3 cut(s) 185, 651, 1347
TseFI GTSAC 1 cut(s) 1713
TseI GCWGC 2 cut(s) 341, 806
Tsp45I GTSAC 1 cut(s) 1713
TspGWI ACGGA 1 cut(s) 1709
TspRI CASTG 3 cut(s) 185, 651, 1347
Tth111I GACNNNGTC 1 cut(s) 72
VneI GTGCAC 2 cut(s) 523, 1175
VpaK11BI GGWCC 2 cut(s) 797, 1085
VspI ATTAAT 1 cut(s) 984
XapI RAATTY 5 cut(s) 529, 639, 719, 787, 1635
XceI RCATGY 2 cut(s) 372, 1795
XcmI CCANNNNNNNNNTGG 1 cut(s) 1204
XmaJI CCTAGG 1 cut(s) 1036
XmiI GTMKAC 1 cut(s) 1283
XmnI GAANNNNTTC 1 cut(s) 743
XspI CTAG 7 cut(s) 188, 266, 1037, 1139, 1304, 1454, 1628
ZrmI AGTACT 1 cut(s) 743
Zsp2I ATGCAT 1 cut(s) 370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.