Rmu_sc0001473.1_g000036

Wall-associated receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001473.1
OG0000066
Physical Location & Seq
Forward (+)
153093 .. 155181
2089 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001473.1_g000036.1.cds

Sequence Viewer

Length: 1428 bp
atgtatggaggcattctgcgacctcctcccaattttaaatgttcaatcggcttactattcttgttcttcgttatgctaccatcgttgaaagttttacggcgcgcagacctctcttttgtttgtgcgtcccttgaaagctggaccttacatggctctagggttggtttacatctgagtaaagcggatggtgattcacatcggaatattgttgccggtgatcgtctaaatgatctcaaagtgttgtattgcacggtttttgatccattattacctcccgggcttgagactcttcatcttcttatcgacccgcgccggaaaagcataccagcttctggaaataatctcaagaaattgaaggtggatatctactccctagttcagaaatacaatgatgaggatctcctttgccttctggattttctcagggctgcacccattttagaagaacttgaaatagctatctttgttggcatctttgttctgctgtttggaatttggttgatacgtcgtgaaaagatgaaaagaatgaagggcagcaaactcaggcagaagtactttagtcacaaagagggagtgcttggatcagtttaccaaggaatactaccagataaaacagtggttgccataaagaagttgaaagtagttaatgctgcaagaattgttaatgaggtgattgccctttctcagatcaaccacaaaaatgtggtgaggctcttaggctgttgtttacagacacgcaagcctctactggtttacgagtacttctccaatattggcactctttataaccacacatatgggagacaatcatcaccattttcattgcaactgcgaatgaaaatagctgtagaaaccgcagctgcactggcatacttgcactcctccacttccaagcccgtaatcatacacaaaaacgtgaagacaatgaacatactattagatgataaatacatggtaaaactgacagactccggattttcaccactccgggggcgcattaaaacgcaaaggacactcggacacttagaccctgaatgtcttcattcaaacacattaataggaaaaagcgacgtgtacagctttggagttgtcttagcggagctaataacaagcaggagggcagctactccccataggcctgaggcagaaagaagcctggcacatgtctttgctagggcaattgagggcgacatcggggacttgcatgaaattctggatgaaaaaattcttgtgggagacatagaaatggtggaaaaagtggcagatttggcatatagatgcataagggaaagaggggaggaaagaccttccatgaaagaagtagccatggaagtacttgaggcattgcgaattatggccaagcatccagagggcatgcttagtttctctgagtctcccgaaagtgttggaaggattttcaaattataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr WAK

Protein Analysis

475

Amino Acids

53.48

Weight (kDa)

9.33

Isoelectric Point (pI)

42.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000066)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G21210 AT1G21230 AT1G21240 AT1G21240 AT1G21245 AT1G21250 AT1G21270 AT1G22720 AT3G25490
fragaria_vesca FvH4_2g35051 FvH4_2g35051 FvH4_2g35060 FvH4_3g10281 FvH4_3g10285 FvH4_3g10286 FvH4_3g10311 FvH4_3g10311 FvH4_3g10320 FvH4_3g10332 FvH4_3g10340 FvH4_3g10350 FvH4_3g10360 FvH4_3g10390 FvH4_3g10412 FvH4_3g10413 FvH4_3g10461 FvH4_3g10462 FvH4_3g10470 FvH4_3g10510 FvH4_3g10520 FvH4_3g10530 FvH4_3g10550 FvH4_3g10560 FvH4_3g10611 FvH4_3g11730 FvH4_6g53140 FvH4_6g53142 FvH4_7g31880 FvH4_7g31910 FvH4_7g31920
malus_domestica MD05G1269900.v1.1 MD05G1270000.v1.1 MD05G1270200.v1.1 MD05G1270400.v1.1 MD05G1270500.v1.1 MD05G1270600.v1.1 MD05G1270800.v1.1 MD05G1270900.v1.1 MD07G1183800.v1.1 MD08G1107600.v1.1 MD10G1248500.v1.1 MD10G1249200.v1.1 MD10G1249500.v1.1 MD10G1250000.v1.1 MD10G1250500.v1.1 MD10G1250900.v1.1 MD10G1251200.v1.1 MD10G1251400.v1.1 MD13G1004600.v1.1 MD15G1088400.v1.1
prunus_persica Prupe.1G442400_v2.0.a1 Prupe.1G442500_v2.0.a1 Prupe.2G223400_v2.0.a1 Prupe.4G091900_v2.0.a1 Prupe.4G093200_v2.0.a1 Prupe.4G093300_v2.0.a1 Prupe.4G093400_v2.0.a1 Prupe.4G093500_v2.0.a1 Prupe.4G094100_v2.0.a1 Prupe.4G094200_v2.0.a1 Prupe.4G094300_v2.0.a1 Prupe.6G358300_v2.0.a1
pyrus_communis pycom08g08990 pycom10g20660 pycom10g20670 pycom10g20680 pycom10g20710 pycom10g20740 pycom13g00400 pycom15g08290
rosa_chinensis RchiOBHm_Chr1g0326861 RchiOBHm_Chr1g0326871 RchiOBHm_Chr1g0331391 RchiOBHm_Chr1g0336911 RchiOBHm_Chr1g0364001 RchiOBHm_Chr2g0174541 RchiOBHm_Chr2g0175041 RchiOBHm_Chr2g0175101 RchiOBHm_Chr2g0175121 RchiOBHm_Chr3g0486331 RchiOBHm_Chr5g0015581 RchiOBHm_Chr5g0016551 RchiOBHm_Chr5g0016561 RchiOBHm_Chr5g0016581 RchiOBHm_Chr5g0016601 RchiOBHm_Chr5g0016611 RchiOBHm_Chr5g0016641 RchiOBHm_Chr5g0016661 RchiOBHm_Chr5g0016691 RchiOBHm_Chr5g0016701 RchiOBHm_Chr5g0016731 RchiOBHm_Chr5g0016741 RchiOBHm_Chr5g0016811 RchiOBHm_Chr5g0016841 RchiOBHm_Chr5g0016871 RchiOBHm_Chr5g0016881 RchiOBHm_Chr5g0016931 RchiOBHm_Chr5g0017021 RchiOBHm_Chr5g0017041 RchiOBHm_Chr5g0017071 RchiOBHm_Chr5g0017091 RchiOBHm_Chr5g0017121 RchiOBHm_Chr5g0017141 RchiOBHm_Chr5g0017291 RchiOBHm_Chr5g0017321 RchiOBHm_Chr5g0017401 RchiOBHm_Chr5g0019001 RchiOBHm_Chr5g0019071 RchiOBHm_Chr5g0028941 RchiOBHm_Chr5g0052141 RchiOBHm_Chr5g0054721 RchiOBHm_Chr5g0054801 RchiOBHm_Chr5g0054931 RchiOBHm_Chr5g0054941 RchiOBHm_Chr6g0259291 RchiOBHm_Chr6g0292991 RchiOBHm_Chr6g0306911
rosa_laevigata RLG00000009465 RLG00000009468 RLG00000010755 RLG00000011976 RLG00000014541 RLG00000014542 RLG00000015169 RLG00000022308 RLG00000027529 RLG00000029324 RLG00000030244 RLG00000030245 RLG00000032210 RLG00000032211 RLG00000032257 RLG00000032259 RLG00000032260 RLG00000032261 RLG00000032262 RLG00000032268 RLG00000032269 RLG00000032272 RLG00000032282 RLG00000032283 RLG00000032308 RLG00000032413 RLG00000033129 RLG00000034945
rosa_multiflora Rmu_co8241929.1_g000001 Rmu_co8269227.1_g000001 Rmu_co8461259.1_g000001 Rmu_co8495385.1_g000001 Rmu_sc0000028.1_g000003 Rmu_sc0000083.1_g000009 Rmu_sc0000083.1_g000010 Rmu_sc0000083.1_g000031 Rmu_sc0000083.1_g000043 Rmu_sc0000083.1_g000046 Rmu_sc0000083.1_g000047 Rmu_sc0000563.1_g000024 Rmu_sc0000842.1_g000012 Rmu_sc0001235.1_g000001 Rmu_sc0001235.1_g000005 Rmu_sc0001235.1_g000009 Rmu_sc0001235.1_g000015 Rmu_sc0001235.1_g000016 Rmu_sc0001235.1_g000017 Rmu_sc0001473.1_g000036 Rmu_sc0001607.1_g000016 Rmu_sc0001788.1_g000006 Rmu_sc0002018.1_g000008 Rmu_sc0002028.1_g000001 Rmu_sc0002680.1_g000011 Rmu_sc0002798.1_g000023 Rmu_sc0002886.1_g000023 Rmu_sc0002989.1_g000012 Rmu_sc0003064.1_g000009 Rmu_sc0003382.1_g000006 Rmu_sc0003630.1_g000002 Rmu_sc0003630.1_g000047 Rmu_sc0003630.1_g000066 Rmu_sc0003630.1_g000067 Rmu_sc0003649.1_g000010 Rmu_sc0003688.1_g000005 Rmu_sc0003920.1_g000007 Rmu_sc0004765.1_g000007 Rmu_sc0004765.1_g000008 Rmu_sc0004920.1_g000011 Rmu_sc0005223.1_g000008 Rmu_sc0005223.1_g000010 Rmu_sc0005223.1_g000015 Rmu_sc0005223.1_g000016 Rmu_sc0005319.1_g000014 Rmu_sc0005319.1_g000015 Rmu_sc0005319.1_g000018 Rmu_sc0005319.1_g000019 Rmu_sc0005319.1_g000025 Rmu_sc0005418.1_g000007 Rmu_sc0005418.1_g000012 Rmu_sc0006106.1_g000011 Rmu_sc0006914.1_g000012 Rmu_sc0007023.1_g000001 Rmu_sc0007662.1_g000001 Rmu_sc0007920.1_g000002 Rmu_sc0007920.1_g000013 Rmu_sc0008053.1_g000016 Rmu_sc0008053.1_g000017 Rmu_sc0008053.1_g000018 Rmu_sc0008053.1_g000023 Rmu_sc0008053.1_g000050 Rmu_sc0009042.1_g000007 Rmu_sc0009042.1_g000008 Rmu_sc0010642.1_g000008 Rmu_sc0011109.1_g000002 Rmu_sc0011314.1_g000006 Rmu_sc0011974.1_g000006 Rmu_sc0012179.1_g000009 Rmu_sc0015169.1_g000001 Rmu_sc0016368.1_g000002 Rmu_sc0022659.1_g000001 Rmu_sc0027371.1_g000001 Rmu_sc0028213.1_g000001 Rmu_sc0034526.1_g000001 Rmu_sc0039366.1_g000002 Rmu_ssc0000050.1_g000084 Rmu_ssc0000050.1_g000088 Rmu_ssc0000167.1_g000017
rosa_roxburghii Rroxscaffold_1G00011340 Rroxscaffold_1G00025710 Rroxscaffold_1G00025870 Rroxscaffold_1G00026070 Rroxscaffold_1G00026170 Rroxscaffold_1G00026200 Rroxscaffold_1G00026270 Rroxscaffold_1G00050950 Rroxscaffold_1G00058900 Rroxscaffold_1G00060040 Rroxscaffold_1G00060060 Rroxscaffold_1G00060070 Rroxscaffold_1G00060080 Rroxscaffold_1G00060110 Rroxscaffold_1G00060120 Rroxscaffold_1G00060140 Rroxscaffold_1G00060170 Rroxscaffold_1G00060210 Rroxscaffold_1G00060220 Rroxscaffold_1G00060240 Rroxscaffold_1G00060250 Rroxscaffold_1G00060260 Rroxscaffold_1G00060300 Rroxscaffold_1G00060320 Rroxscaffold_1G00060330 Rroxscaffold_1G00060900 Rroxscaffold_1G00060920 Rroxscaffold_1G00073980 Rroxscaffold_2G00077560 Rroxscaffold_2G00077580 Rroxscaffold_2G00146990 Rroxscaffold_3G00236200 Rroxscaffold_3G00236210 Rroxscaffold_3G00236220 Rroxscaffold_4G00292760 Rroxscaffold_4G00315200 Rroxscaffold_4G00315240 Rroxscaffold_4G00326240 Rroxscaffold_4G00328980 Rroxscaffold_5G00341890 Rroxscaffold_7G00161350 Rroxscaffold_7G00174490 Rroxscaffold_7G00206550
rosa_rugosa Rorug01G0093000 Rorug01G0093100 Rorug01G0128800 Rorug01G0312000 Rorug01G0312000 Rorug02G0581100 Rorug03G0224600 Rorug05G0028500 Rorug05G0032700 Rorug05G0032800 Rorug05G0032900 Rorug05G0032900 Rorug05G0033000 Rorug05G0033100 Rorug05G0033300 Rorug05G0033400 Rorug05G0033900 Rorug05G0034900 Rorug05G0035000 Rorug05G0046900 Rorug05G0047500 Rorug05G0047500 Rorug05G0111600 Rorug05G0287900 Rorug05G0288700 Rorug05G0586900 Rorug06G0231700 Rorug06G0354300 Rorug06G0354400
rosa_samantha Rh1DG122200 Rh2DG686800 Rh5BG136600 Rh6AG344500 Rh6BG351900 Rh6CG359000 Rh6CG359100 Rh6CG387600 Rh6CG480500 Rh6DG344600 Rh6DG467400
rosa_wichuraiana Rw0G010250 Rw0G014820 Rw0G021400 Rw0G023100 Rw1G009450 Rw1G012100 Rw1G012180 Rw1G028360 Rw2G054260 Rw3G024370 Rw3G024420 Rw3G024470 Rw5G010850 Rw5G011010 Rw5G011020 Rw5G011050 Rw5G011080 Rw5G011120 Rw5G012300 Rw5G018470 Rw5G033830 Rw6G008930 Rw6G030070

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 786, 1426
AccB7I CCANNNNNTGG 1 cut(s) 332
AccII CGCG 2 cut(s) 102, 310
AccIII TCCGGA 1 cut(s) 971
AciI CCGC 4 cut(s) 182, 308, 855, 1097
AclWI GGATC 3 cut(s) 254, 405, 589
AcoI YGGCCR 1 cut(s) 1356
AcsI RAATTY 3 cut(s) 492, 1209, 1224
AfaI GTAC 4 cut(s) 554, 761, 1076, 1335
AfiI CCNNNNNNNGG 2 cut(s) 332, 989
AflIII ACRYGT 2 cut(s) 1071, 1162
AgsI TTSAA 8 cut(s) 45, 88, 134, 355, 452, 637, 1047, 1420
AjiI CACGTC 1 cut(s) 1072
AjnI CCWGG 1 cut(s) 1155
AluBI AGCT 8 cut(s) 138, 329, 458, 845, 860, 1080, 1102, 1124
AluI AGCT 8 cut(s) 138, 329, 458, 845, 860, 1080, 1102, 1124
Alw26I GTCTC 4 cut(s) 278, 796, 1230, 1398
AlwI GGATC 3 cut(s) 254, 405, 589
AlwNI CAGNNNCTG 1 cut(s) 332
Ama87I CYCGRG 1 cut(s) 275
Aor13HI TCCGGA 1 cut(s) 971
AoxI GGCC 2 cut(s) 1136, 1356
ApeKI GCWGC 6 cut(s) 428, 534, 650, 857, 860, 1121
ApoI RAATTY 3 cut(s) 492, 1209, 1224
ArsI GACNNNNNNTTYG 2 cut(s) 98, 130
AseI ATTAAT 1 cut(s) 1055
Asp700I GAANNNNTTC 2 cut(s) 1038, 1224
AspLEI GCGC 4 cut(s) 102, 104, 312, 996
AspS9I GGNCC 1 cut(s) 141
AsuC2I CCSGG 3 cut(s) 276, 277, 989
AsuHPI GGTGA 6 cut(s) 200, 227, 682, 718, 804, 972
AvaI CYCGRG 1 cut(s) 275
AvaII GGWCC 1 cut(s) 141
AxyI CCTNAGG 1 cut(s) 1140
BalI TGGCCA 1 cut(s) 1358
BbsI GAAGAC 2 cut(s) 926, 1031
BbvI GCAGC 6 cut(s) 415, 546, 637, 847, 869, 1133
BccI CCATC 2 cut(s) 88, 179
BceAI ACGGC 1 cut(s) 113
BciT130I CCWGG 1 cut(s) 1157
BcnI CCSGG 3 cut(s) 276, 277, 989
BcoDI GTCTC 4 cut(s) 278, 796, 1230, 1398
BfaI CTAG 3 cut(s) 156, 374, 1173
BfmI CTRYAG 1 cut(s) 846
BisI GCNGC 6 cut(s) 429, 535, 651, 858, 861, 1122
BlsI GCNGC 6 cut(s) 430, 536, 652, 859, 862, 1123
BmcAI AGTACT 3 cut(s) 554, 761, 1335
Bme1390I CCNGG 4 cut(s) 276, 277, 989, 1157
Bme18I GGWCC 1 cut(s) 141
BmeT110I CYCGRG 1 cut(s) 275
BmgBI CACGTC 1 cut(s) 1072
BmgT120I GGNCC 1 cut(s) 141
BmrFI CCNGG 4 cut(s) 276, 277, 989, 1157
BmsI GCATC 3 cut(s) 480, 1268, 1372
BpiI GAAGAC 2 cut(s) 926, 1031
BplI GAGNNNNNCTC 2 cut(s) 749, 781
BpuEI CTTGAG 3 cut(s) 302, 329, 1358
BpuMI CCSGG 3 cut(s) 276, 277, 989
BsaBI GATNNNNATC 2 cut(s) 195, 396
BsaJI CCNNGG 4 cut(s) 275, 592, 988, 1326
BsaWI WCCGGW 1 cut(s) 971
BsaXI ACNNNNNCTCC 2 cut(s) 863, 893
Bsc4I CCNNNNNNNGG 2 cut(s) 332, 989
Bse118I RCCGGY 1 cut(s) 212
Bse1I ACTGG 2 cut(s) 753, 870
Bse21I CCTNAGG 1 cut(s) 1140
Bse3DI GCAATG 2 cut(s) 821, 1343
Bse8I GATNNNNATC 2 cut(s) 195, 396
BseAI TCCGGA 1 cut(s) 971
BseBI CCWGG 1 cut(s) 1157
BseDI CCNNGG 4 cut(s) 275, 592, 988, 1326
BseGI GGATG 3 cut(s) 190, 1222, 1363
BseJI GATNNNNATC 2 cut(s) 195, 396
BseLI CCNNNNNNNGG 2 cut(s) 332, 989
BseMI GCAATG 2 cut(s) 821, 1343
BseMII CTCAG 6 cut(s) 164, 436, 556, 698, 1131, 1380
BseNI ACTGG 2 cut(s) 753, 870
BsePI GCGCGC 1 cut(s) 100
BseRI GAGGAG 2 cut(s) 15, 871
BseXI GCAGC 6 cut(s) 415, 546, 637, 847, 869, 1133
BsgI GTGCAG 2 cut(s) 414, 846
Bsh1236I CGCG 2 cut(s) 102, 310
BshFI GGCC 2 cut(s) 1138, 1358
BsiHKCI CYCGRG 1 cut(s) 275
BsiSI CCGG 5 cut(s) 213, 276, 313, 972, 988
BslFI GGGAC 2 cut(s) 112, 1211
BslI CCNNNNNNNGG 2 cut(s) 332, 989
BsmAI GTCTC 4 cut(s) 278, 796, 1230, 1398
BsmFI GGGAC 2 cut(s) 112, 1211
BsmI GAATGC 1 cut(s) 12
BsnI GGCC 2 cut(s) 1138, 1358
BsoBI CYCGRG 1 cut(s) 275
Bsp13I TCCGGA 1 cut(s) 971
Bsp1407I TGTACA 1 cut(s) 1074
Bsp143I GATC 6 cut(s) 217, 229, 259, 397, 581, 687
Bsp19I CCATGG 1 cut(s) 1326
BspACI CCGC 4 cut(s) 182, 308, 855, 1097
BspANI GGCC 2 cut(s) 1138, 1358
BspCNI CTCAG 6 cut(s) 165, 435, 555, 697, 1132, 1381
BspEI TCCGGA 1 cut(s) 971
BspFNI CGCG 2 cut(s) 102, 310
BspPI GGATC 3 cut(s) 254, 405, 589
BsrDI GCAATG 2 cut(s) 821, 1343
BsrFI RCCGGY 1 cut(s) 212
BsrGI TGTACA 1 cut(s) 1074
BsrI ACTGG 2 cut(s) 753, 870
BssAI RCCGGY 1 cut(s) 212
BssECI CCNNGG 4 cut(s) 275, 592, 988, 1326
BssHII GCGCGC 1 cut(s) 100
BssMI GATC 6 cut(s) 217, 229, 259, 397, 581, 687
BssT1I CCWWGG 2 cut(s) 592, 1326
Bst2UI CCWGG 1 cut(s) 1157
Bst4CI ACNGT 2 cut(s) 253, 616
Bst6I CTCTTC 1 cut(s) 294
BstAUI TGTACA 1 cut(s) 1074
BstC8I GCNNGC 3 cut(s) 102, 740, 1376
BstDSI CCRYGG 1 cut(s) 1326
BstF5I GGATG 3 cut(s) 190, 1222, 1363
BstFNI CGCG 2 cut(s) 102, 310
BstHHI GCGC 4 cut(s) 102, 104, 312, 996
BstKTI GATC 6 cut(s) 220, 232, 262, 400, 584, 690
BstMAI GTCTC 4 cut(s) 278, 796, 1230, 1398
BstMBI GATC 6 cut(s) 217, 229, 259, 397, 581, 687
BstMWI GCNNNNNNNGC 3 cut(s) 318, 866, 1268
BstNI CCWGG 1 cut(s) 1157
BstNSI RCATGY 2 cut(s) 1166, 1378
BstSCI CCNGG 4 cut(s) 274, 275, 987, 1155
BstSFI CTRYAG 1 cut(s) 846
BstUI CGCG 2 cut(s) 102, 310
BstV1I GCAGC 6 cut(s) 415, 546, 637, 847, 869, 1133
BstV2I GAAGAC 2 cut(s) 926, 1031
BstX2I RGATCY 1 cut(s) 397
BstXI CCANNNNNNTGG 1 cut(s) 797
BstYI RGATCY 1 cut(s) 397
Bsu36I CCTNAGG 1 cut(s) 1140
BsuRI GGCC 2 cut(s) 1138, 1358
BtgI CCRYGG 1 cut(s) 1326
BtrI CACGTC 1 cut(s) 1072
BtsCI GGATG 3 cut(s) 190, 1222, 1363
BtsIMutI CAGTG 2 cut(s) 621, 863
Cac8I GCNNGC 3 cut(s) 102, 740, 1376
CaiI CAGNNNCTG 1 cut(s) 332
CfoI GCGC 4 cut(s) 102, 104, 312, 996
Cfr10I RCCGGY 1 cut(s) 212
Cfr13I GGNCC 1 cut(s) 141
Cfr9I CCCGGG 1 cut(s) 275
CseI GACGC 1 cut(s) 114
Csp6I GTAC 4 cut(s) 553, 760, 1075, 1334
CviAII CATG 7 cut(s) 149, 952, 1163, 1205, 1312, 1327, 1375
CviQI GTAC 4 cut(s) 553, 760, 1075, 1334
DpnI GATC 6 cut(s) 219, 231, 261, 399, 583, 689
DpnII GATC 6 cut(s) 217, 229, 259, 397, 581, 687
DraI TTTAAA 1 cut(s) 37
EaeI YGGCCR 1 cut(s) 1356
Eam1104I CTCTTC 1 cut(s) 294
EarI CTCTTC 1 cut(s) 294
Eco130I CCWWGG 2 cut(s) 592, 1326
Eco147I AGGCCT 1 cut(s) 1138
Eco32I GATATC 1 cut(s) 364
Eco47I GGWCC 1 cut(s) 141
Eco81I CCTNAGG 1 cut(s) 1140
Eco88I CYCGRG 1 cut(s) 275
EcoRII CCWGG 1 cut(s) 1155
EcoRV GATATC 1 cut(s) 364
EcoT14I CCWWGG 2 cut(s) 592, 1326
EcoT22I ATGCAT 1 cut(s) 1283
ErhI CCWWGG 2 cut(s) 592, 1326
FaeI CATG 7 cut(s) 152, 955, 1166, 1208, 1315, 1330, 1378
FaqI GGGAC 2 cut(s) 112, 1211
FatI CATG 7 cut(s) 148, 951, 1162, 1204, 1311, 1326, 1374
FauI CCCGC 1 cut(s) 315
FauNDI CATATG 1 cut(s) 796
Fnu4HI GCNGC 6 cut(s) 429, 535, 651, 858, 861, 1122
FokI GGATG 3 cut(s) 197, 1229, 1350
Fsp4HI GCNGC 6 cut(s) 429, 535, 651, 858, 861, 1122
FspBI CTAG 3 cut(s) 156, 374, 1173
GlaI GCGC 4 cut(s) 101, 103, 311, 995
GluI GCNGC 6 cut(s) 429, 535, 651, 858, 861, 1122
HaeIII GGCC 2 cut(s) 1138, 1358
HapII CCGG 5 cut(s) 213, 276, 313, 972, 988
HgaI GACGC 1 cut(s) 114
HhaI GCGC 4 cut(s) 102, 104, 312, 996
Hin1II CATG 7 cut(s) 152, 955, 1166, 1208, 1315, 1330, 1378
Hin6I GCGC 4 cut(s) 100, 102, 310, 994
HinP1I GCGC 4 cut(s) 100, 102, 310, 994
HinfI GANTC 4 cut(s) 191, 286, 968, 1391
HpaII CCGG 5 cut(s) 213, 276, 313, 972, 988
HphI GGTGA 6 cut(s) 200, 227, 682, 718, 804, 972
Hpy166II GTNNAC 5 cut(s) 167, 589, 728, 754, 1075
Hpy188I TCNGA 6 cut(s) 174, 201, 381, 687, 1019, 1390
Hpy188III TCNNGA 8 cut(s) 333, 346, 413, 509, 972, 1214, 1367, 1397
Hpy8I GTNNAC 5 cut(s) 167, 589, 728, 754, 1075
Hpy99I CGWCG 2 cut(s) 510, 1073
HpyAV CCTTC 5 cut(s) 349, 419, 523, 1317, 1404
HpyCH4III ACNGT 2 cut(s) 253, 616
HpyCH4IV ACGT 3 cut(s) 505, 915, 1071
HpyCH4V TGCA 8 cut(s) 249, 431, 653, 826, 863, 877, 1204, 1281
HpyF10VI GCNNNNNNNGC 3 cut(s) 318, 866, 1268
HpySE526I ACGT 3 cut(s) 505, 915, 1071
Hsp92II CATG 7 cut(s) 152, 955, 1166, 1208, 1315, 1330, 1378
HspAI GCGC 4 cut(s) 100, 102, 310, 994
Kpn2I TCCGGA 1 cut(s) 971
Kzo9I GATC 6 cut(s) 217, 229, 259, 397, 581, 687
LmnI GCTCC 1 cut(s) 1099
Lsp1109I GCAGC 6 cut(s) 415, 546, 637, 847, 869, 1133
LweI GCATC 3 cut(s) 480, 1268, 1372
MaeI CTAG 3 cut(s) 156, 374, 1173
MaeII ACGT 3 cut(s) 505, 915, 1071
MaeIII GTNAC 1 cut(s) 560
MalI GATC 6 cut(s) 219, 231, 261, 399, 583, 689
MboI GATC 6 cut(s) 217, 229, 259, 397, 581, 687
MboII GAAGA 6 cut(s) 58, 281, 287, 455, 931, 1031
MfeI CAATTG 1 cut(s) 1179
MflI RGATCY 1 cut(s) 397
MlsI TGGCCA 1 cut(s) 1358
MluCI AATT 9 cut(s) 31, 350, 492, 657, 1179, 1209, 1224, 1350, 1421
MluNI TGGCCA 1 cut(s) 1358
MlyI GAGTC 3 cut(s) 280, 962, 1400
MmeI TCCRAC 1 cut(s) 1387
Mox20I TGGCCA 1 cut(s) 1358
Mph1103I ATGCAT 1 cut(s) 1283
MroI TCCGGA 1 cut(s) 971
MroXI GAANNNNTTC 2 cut(s) 1038, 1224
MscI TGGCCA 1 cut(s) 1358
MseI TTAA 5 cut(s) 36, 645, 663, 999, 1055
MslI CAYNNNNRTG 4 cut(s) 699, 795, 1244, 1276
Msp20I TGGCCA 1 cut(s) 1358
MspA1I CMGCKG 1 cut(s) 860
MspI CCGG 5 cut(s) 213, 276, 313, 972, 988
MspR9I CCNGG 4 cut(s) 276, 277, 989, 1157
MunI CAATTG 1 cut(s) 1179
Mva1269I GAATGC 1 cut(s) 12
MvaI CCWGG 1 cut(s) 1157
MvnI CGCG 2 cut(s) 102, 310
MwoI GCNNNNNNNGC 3 cut(s) 318, 866, 1268
NciI CCSGG 3 cut(s) 276, 277, 989
NcoI CCATGG 1 cut(s) 1326
NdeI CATATG 1 cut(s) 796
NdeII GATC 6 cut(s) 217, 229, 259, 397, 581, 687
NlaIII CATG 7 cut(s) 152, 955, 1166, 1208, 1315, 1330, 1378
NmuCI GTSAC 1 cut(s) 560
NsiI ATGCAT 1 cut(s) 1283
NspI RCATGY 2 cut(s) 1166, 1378
PaeI GCATGC 1 cut(s) 1378
PauI GCGCGC 1 cut(s) 100
PceI AGGCCT 1 cut(s) 1138
PciI ACATGT 1 cut(s) 1162
PctI GAATGC 1 cut(s) 12
PdmI GAANNNNTTC 2 cut(s) 1038, 1224
PfeI GAWTC 1 cut(s) 191
PflMI CCANNNNNTGG 1 cut(s) 332
PkrI GCNGC 6 cut(s) 430, 536, 652, 859, 862, 1123
PleI GAGTC 3 cut(s) 280, 962, 1399
PpsI GAGTC 3 cut(s) 280, 962, 1399
PscI ACATGT 1 cut(s) 1162
PshBI ATTAAT 1 cut(s) 1055
PsiI TTATAA 2 cut(s) 786, 1426
Psp6I CCWGG 1 cut(s) 1155
PspGI CCWGG 1 cut(s) 1155
PspPI GGNCC 1 cut(s) 141
PstNI CAGNNNCTG 1 cut(s) 332
PsuI RGATCY 1 cut(s) 397
PteI GCGCGC 1 cut(s) 100
PvuII CAGCTG 1 cut(s) 860
RsaI GTAC 4 cut(s) 554, 761, 1076, 1335
RsaNI GTAC 4 cut(s) 553, 760, 1075, 1334
RseI CAYNNNNRTG 4 cut(s) 699, 795, 1244, 1276
SaqAI TTAA 5 cut(s) 36, 645, 663, 999, 1055
SatI GCNGC 6 cut(s) 429, 535, 651, 858, 861, 1122
Sau3AI GATC 6 cut(s) 217, 229, 259, 397, 581, 687
Sau96I GGNCC 1 cut(s) 141
ScaI AGTACT 3 cut(s) 554, 761, 1335
SchI GAGTC 3 cut(s) 280, 962, 1400
ScrFI CCNGG 4 cut(s) 276, 277, 989, 1157
SfaNI GCATC 3 cut(s) 480, 1268, 1372
SfcI CTRYAG 1 cut(s) 846
SinI GGWCC 1 cut(s) 141
SmaI CCCGGG 1 cut(s) 277
SmiMI CAYNNNNRTG 4 cut(s) 699, 795, 1244, 1276
SmlI CTYRAG 3 cut(s) 281, 344, 1337
SmoI CTYRAG 3 cut(s) 281, 344, 1337
SphI GCATGC 1 cut(s) 1378
Sse9I AATT 9 cut(s) 31, 350, 492, 657, 1179, 1209, 1224, 1350, 1421
SseBI AGGCCT 1 cut(s) 1138
SsiI CCGC 4 cut(s) 182, 308, 855, 1097
SspI AATATT 2 cut(s) 205, 772
SspMI CTAG 3 cut(s) 156, 374, 1173
StuI AGGCCT 1 cut(s) 1138
StyD4I CCNGG 4 cut(s) 274, 275, 987, 1155
StyI CCWWGG 2 cut(s) 592, 1326
TaaI ACNGT 2 cut(s) 253, 616
TaiI ACGT 3 cut(s) 508, 918, 1074
TaqI TCGA 1 cut(s) 303
TasI AATT 9 cut(s) 31, 350, 492, 657, 1179, 1209, 1224, 1350, 1421
TatI WGTACW 4 cut(s) 552, 759, 1074, 1333
TfiI GAWTC 1 cut(s) 191
Tru1I TTAA 5 cut(s) 36, 645, 663, 999, 1055
Tru9I TTAA 5 cut(s) 36, 645, 663, 999, 1055
TscAI CASTG 2 cut(s) 621, 870
TseFI GTSAC 1 cut(s) 560
TseI GCWGC 6 cut(s) 428, 534, 650, 857, 860, 1121
Tsp45I GTSAC 1 cut(s) 560
TspMI CCCGGG 1 cut(s) 275
TspRI CASTG 2 cut(s) 621, 870
Van91I CCANNNNNTGG 1 cut(s) 332
VpaK11BI GGWCC 1 cut(s) 141
VspI ATTAAT 1 cut(s) 1055
XapI RAATTY 3 cut(s) 492, 1209, 1224
XceI RCATGY 2 cut(s) 1166, 1378
XmaI CCCGGG 1 cut(s) 275
XmnI GAANNNNTTC 2 cut(s) 1038, 1224
XspI CTAG 3 cut(s) 156, 374, 1173
ZrmI AGTACT 3 cut(s) 554, 761, 1335
Zsp2I ATGCAT 1 cut(s) 1283
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.